4R9ZA

Mycobacterium avium subs paratuberculosis tesb protein map1729c
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
269
structure length
245
Chain Sequence
SLGDVLATLELERVGQWRFVGQQLPAPANHILGGHISAQALLAASRTAAGREPHSVHTYFLRPGDSRQPVDFEVVDLQEGRTFSARRVTARQDDKILMEAMSSFKVQVVYQPIMPEAPSPESLASLRWFERRTIETETVPPARVPMWWRPDGRVPDDPVLTASLVAYMSAVTLTEPAFAARGGVGASAQRDHSVWFHGRAVLSDWLFYDRSSPSSAGSLALASGTMFNRTGELVCTVKQEMYFPP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Uncharacterized protein
publication title Mycobacterium avium subs paratuberculosis tesB protein MAP1729c
rcsb
source organism Mycobacterium avium subsp. paratuberculosis
total genus 67
structure length 245
sequence length 269
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13622 4HBT_3 Thioesterase-like superfamily
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.129.90 Alpha Beta Roll Thiol Ester Dehydrase; Chain A Thiol Ester Dehydrase; Chain A 4r9zA00
3U0AA 4R9ZA 3RQBA 4QFWA 3BBJA 3CJYA 3RD7A 4R4UA
chains in the Genus database with same CATH superfamily
3R36A 3IR3A 4RLTB 4MOBA 3R32A 4K02A 3KG9A 1YOCA 2F0XA 2OV9A 3ZH5A 3E8PA 1S5UA 3E29A 3DP2A 4E3EA 3CF8A 2VZ9A 4XY5A 1PSUA 1ZKIA 1WLVA 1WM6A 3R3BA 4I82A 3S4KA 1ZHGA 2W3XA 2B6EA 4KC5A 4A0ZA 3RQBA 1SH8A 4FQ9A 3D6LA 3DKZA 1MKAA 2HBOA 3D04A 2O5UA 3LMBA 4I83A 5EO2A 2V1OA 3LBBA 3LWGA 4FFUA 4A0YA 4AE7A 3F5OA 3CK1A 3KX8A 3OMLA 5DIOA 4ZV3A 2EISA 3KG8A 4RLJA 2B3MA 1SC0A 3U0AA 2EGIA 5KKUA 4I4JA 2H4UA 4QFWA 2GVHA 2QWZA 5EGJA 2Q78A 5BUXA 4RLWB 2OAFA 5HMCA 4CL6A 1WN3A 3FRNA 3ZH6A 4B8UA 5SZVA 2OKHA 2FUJA 2EGRA 2FS2A 4K4AA 4RV2A 3BBJA 4WNBB 5E1VA 3D6XA 3KUVA 4W78B 5EO4A 5SZUA 3ED0A 5SZZA 5T06A 3R87A 1NJKA 4ZRFA 2ESSA 4OOCA 3B18A 5CPGA 3HMJG 5EGLA 4ZRBA 3EXZA 4MTUA 3SPSA 3DOYA 3AZ8A 4RLTA 3WEWA 5BP2A 2O6TA 5T07A 3CJYA 3R3CA 1VPMA 3DP1A 3NWZA 5EGKA 1C8UA 3ESIA 5BP3A 2CWZA 4QD8A 5T02A 5KL9A 4ZW0A 4A12A 3ZH7B 2GLMA 2O6BA 3KVIA 5DM5A 3EL6A 3QY3A 3E1EA 3P2SA 2O6UA 2QQPA 4R4UA 3P3IA 4MOCA 4K4BA 4R9ZA 1Y7UA 2GF6A 2UV8G 1Q4TA 4K4DA 3KV7A 4QDBA 4ZJBA 2AV9A 4I45A 4GAHA 1TBUA 2PFCA 2PZHA 2GLLA 2CYEA 4MZQA 4QD9A 3BNVA 3GEKA 5SZYA 4HZOA 1BVQA 1J1YA 3LW3A 3KVUA 4RLUB 4YBVA 1SBKA 4RLWA 4RLJB 2QQ2A 4HZPA 2DSLA 4NCPA 4XY6A 4WNBA 2XFLA 1Q6WA 3KW1A 4LN9A 4W78A 2EGJA 4H4GA 4QDAA 2C2IA 3HRRA 4B0IA 1MKBA 5HD6A 3KH8A 3BJKA 2VKZG 4RMMA 5EP5A 3AZ9A 1Q4SA 5BUWA 4KEHA 3AZAA 4QD7A 3R37A 5HMBA 3TEAA 1Z54A 4U3VA 5F6RA 3KG7A 4K00A 3DP3A 2F41A 2HX5A 4M20A 5BUYA 3RD7A 3DP0A 3R3AA 3DOZA 1IQ6A 3P3FA 1PN4A 2NUJA 3LBEA 3B7JA 2VZ8A 1Q4UA 1S9CA 1VH5A 2HLJA 3B7KA 4K49A 1IXLA 4K4CA 2BI0A 2GLVA 4IENA 4HZNA 4ORDA 3ZH7A 2CY9A 1PN2A 1VI8A 2GLPA 1VH9A 2OKIA 1LO7A 2XEMA 3F1TA 4B0JA 3KV8A 3R34A 3HRQA 2PIMA 3S6PA 3KVZA 3K67A 4RV2B 1LO9A 4A0XA 3CF9A 2OIWA 3HM0A 3R3DA 3R3FA 3QOOA 3KG6A 4GAKA 4AE8A 3HDUA 3R35A 3P2RA 3KX7A 2PRXA 1T82A 1U1ZA 4B0BA 1OHFA 2F3XA 5BYUA 2OWNA 2Q2BA 3AZBA 1YLIA 1LO8A 1WLUA 1Z6BA 3P2QA 4B0CA 3Q62A 3KUWA 4RLUA 3KHPA 4OOBA 5HWFA 5HZ4A 3LZ7A
chains in the Genus database with same CATH topology
4U3VA 3KG7A 3KG9A 4R9ZA 3ZH5A 2UV8G 4R4UA 3BBJA 5E1VA 3RD7A 2VZ9A 2PFCA 2VZ8A 4OOCA 4KC5A 3B18A 3RQBA 3ZH7A 3HMJG 3HRQA 5BP2A 3S6PA 3CJYA 4LN9A 3KG6A 3KG8A 5BP3A 1OHFA 3HRRA 3U0AA 3ZH7B 5KKUA 4QFWA 2VKZG 3EL6A 2QQPA 3FRNA 3ZH6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3U0A A;  4R9Z A;  3RQB A;  4QFW A;  3BBJ A;  3CJY A;  3RD7 A;  4R4U A; 
#chains in the Genus database with same CATH topology
 3R36 A;  3IR3 A;  4RLT B;  4MOB A;  3R32 A;  4K02 A;  3KG9 A;  1YOC A;  2F0X A;  2OV9 A;  3ZH5 A;  3E8P A;  1S5U A;  3E29 A;  3DP2 A;  4E3E A;  3CF8 A;  2VZ9 A;  4XY5 A;  1PSU A;  1ZKI A;  1WLV A;  1WM6 A;  3R3B A;  4I82 A;  3S4K A;  1ZHG A;  2W3X A;  2B6E A;  4KC5 A;  4A0Z A;  3RQB A;  1SH8 A;  4FQ9 A;  3D6L A;  3DKZ A;  1MKA A;  2HBO A;  3D04 A;  2O5U A;  3LMB A;  4I83 A;  5EO2 A;  2V1O A;  3LBB A;  3LWG A;  4FFU A;  4A0Y A;  4AE7 A;  3F5O A;  3CK1 A;  3KX8 A;  3OML A;  5DIO A;  4ZV3 A;  2EIS A;  3KG8 A;  4RLJ A;  2B3M A;  1SC0 A;  3U0A A;  2EGI A;  5KKU A;  4I4J A;  2H4U A;  4QFW A;  2GVH A;  2QWZ A;  5EGJ A;  2Q78 A;  5BUX A;  4RLW B;  2OAF A;  5HMC A;  4CL6 A;  1WN3 A;  3FRN A;  3ZH6 A;  4B8U A;  5SZV A;  2OKH A;  2FUJ A;  2EGR A;  2FS2 A;  4K4A A;  4RV2 A;  3BBJ A;  4WNB B;  5E1V A;  3D6X A;  3KUV A;  4W78 B;  5EO4 A;  5SZU A;  3ED0 A;  5SZZ A;  5T06 A;  3R87 A;  1NJK A;  4ZRF A;  2ESS A;  4OOC A;  3B18 A;  5CPG A;  3HMJ G;  5EGL A;  4ZRB A;  3EXZ A;  4MTU A;  3SPS A;  3DOY A;  3AZ8 A;  4RLT A;  3WEW A;  5BP2 A;  2O6T A;  5T07 A;  3CJY A;  3R3C A;  1VPM A;  3DP1 A;  3NWZ A;  5EGK A;  1C8U A;  3ESI A;  5BP3 A;  2CWZ A;  4QD8 A;  5T02 A;  5KL9 A;  4ZW0 A;  4A12 A;  3ZH7 B;  2GLM A;  2O6B A;  3KVI A;  5DM5 A;  3EL6 A;  3QY3 A;  3E1E A;  3P2S A;  2O6U A;  2QQP A;  4R4U A;  3P3I A;  4MOC A;  4K4B A;  4R9Z A;  1Y7U A;  2GF6 A;  2UV8 G;  1Q4T A;  4K4D A;  3KV7 A;  4QDB A;  4ZJB A;  2AV9 A;  4I45 A;  4GAH A;  1TBU A;  2PFC A;  2PZH A;  2GLL A;  2CYE A;  4MZQ A;  4QD9 A;  3BNV A;  3GEK A;  5SZY A;  4HZO A;  1BVQ A;  1J1Y A;  3LW3 A;  3KVU A;  4RLU B;  4YBV A;  1SBK A;  4RLW A;  4RLJ B;  2QQ2 A;  4HZP A;  2DSL A;  4NCP A;  4XY6 A;  4WNB A;  2XFL A;  1Q6W A;  3KW1 A;  4LN9 A;  4W78 A;  2EGJ A;  4H4G A;  4QDA A;  2C2I A;  3HRR A;  4B0I A;  1MKB A;  5HD6 A;  3KH8 A;  3BJK A;  2VKZ G;  4RMM A;  5EP5 A;  3AZ9 A;  1Q4S A;  5BUW A;  4KEH A;  3AZA A;  4QD7 A;  3R37 A;  5HMB A;  3TEA A;  1Z54 A;  4U3V A;  5F6R A;  3KG7 A;  4K00 A;  3DP3 A;  2F41 A;  2HX5 A;  4M20 A;  5BUY A;  3RD7 A;  3DP0 A;  3R3A A;  3DOZ A;  1IQ6 A;  3P3F A;  1PN4 A;  2NUJ A;  3LBE A;  3B7J A;  2VZ8 A;  1Q4U A;  1S9C A;  1VH5 A;  2HLJ A;  3B7K A;  4K49 A;  1IXL A;  4K4C A;  2BI0 A;  2GLV A;  4IEN A;  4HZN A;  4ORD A;  3ZH7 A;  2CY9 A;  1PN2 A;  1VI8 A;  2GLP A;  1VH9 A;  2OKI A;  1LO7 A;  2XEM A;  3F1T A;  4B0J A;  3KV8 A;  3R34 A;  3HRQ A;  2PIM A;  3S6P A;  3KVZ A;  3K67 A;  4RV2 B;  1LO9 A;  4A0X A;  3CF9 A;  2OIW A;  3HM0 A;  3R3D A;  3R3F A;  3QOO A;  3KG6 A;  4GAK A;  4AE8 A;  3HDU A;  3R35 A;  3P2R A;  3KX7 A;  2PRX A;  1T82 A;  1U1Z A;  4B0B A;  1OHF A;  2F3X A;  5BYU A;  2OWN A;  2Q2B A;  3AZB A;  1YLI A;  1LO8 A;  1WLU A;  1Z6B A;  3P2Q A;  4B0C A;  3Q62 A;  3KUW A;  4RLU A;  3KHP A;  4OOB A;  5HWF A;  5HZ4 A;  3LZ7 A; 
#chains in the Genus database with same CATH homology
 4U3V A;  3KG7 A;  3KG9 A;  4R9Z A;  3ZH5 A;  2UV8 G;  4R4U A;  3BBJ A;  5E1V A;  3RD7 A;  2VZ9 A;  2PFC A;  2VZ8 A;  4OOC A;  4KC5 A;  3B18 A;  3RQB A;  3ZH7 A;  3HMJ G;  3HRQ A;  5BP2 A;  3S6P A;  3CJY A;  4LN9 A;  3KG6 A;  3KG8 A;  5BP3 A;  1OHF A;  3HRR A;  3U0A A;  3ZH7 B;  5KKU A;  4QFW A;  2VKZ G;  3EL6 A;  2QQP A;  3FRN A;  3ZH6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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