4RL9A

Crystal structure of acinetobacter baumannii caro1
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
212
structure length
205
Chain Sequence
IPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWTDKYDLDMDNNNVYLNAEIRPWGASTNPWAQGLYIAAGAAYLDNDYDLAKRIGNGDTLSIDGKNYQQAVPGQEGGVRGKMSYKNDIAPYLGFGFAPKISKNWGVFGEVGAYYTGNPKVELTQYNLAPVTGNPTSAQDAVDKEANEIRNDNKYEWMPVGKVGVNFYW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords Carbapenem-associated resistance protein
publication title Small-Molecule Transport by CarO, an Abundant Eight-Stranded beta-Barrel Outer Membrane Protein from Acinetobacter baumannii.
pubmed doi rcsb
source organism Acinetobacter baumannii
total genus 54
structure length 205
sequence length 212
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-10-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.170 Mainly Beta Beta Barrel Porin Porin 4rl9A00
4RLBA 4FUVA 4RL9A
chains in the Genus database with same CATH superfamily
2R4PA 3AAEA 1HXUA 5G26A 5KAFO 3SYSA 3AA1A 3AAAB 1THQA 3T0SA 2KDYA 4D5UA 5TISO 3A0BO 4FRTA 3POQA 1ZHXA 1IZNB 1ZHZA 2Y7SA 3KVDD 3PF1A 2YPVA 2Y0LA 1G90A 3POUA 3AA7A 3POXA 1HXTA 4O4XA 4AKRB 3BRYA 1BH3A 1H6S1 2K4TA 2J1NA 2R4OA 3UPGA 2WJRA 4U9CA 4FESA 2XTQA 3T24A 4UB6O 3VZUX 1ZHTA 3AA6A 1GFPA 4JFBA 3UU2A 2ODJA 1BXWA 3EMNX 2M06A 4N74A 4QQ1A 4LSFA 4LSHA 3FYXA 3PRNA 3SZVA 5AFUK 2AXTO 2F1CX 2MNHA 2O4VA 3VE1A 3LK42 8PRNA 4G76A 5GV0A 4O3YA 2N2LA 1QJPA 4C4VB 4AYMC 2ZLDA 2XE1A 4PUXA 1PHOA 3DA4A 3AA1B 3AA0A 2W81C 4LSEA 5ADXK 2JQYA 4CTDA 2XE2A 3HOEA 3LK2B 4AUIA 1ORMA 4AKMA 2X27X 4AYEC 4O3XB 3C5OA 3WI4A 1PRNA 2XE3A 4AZLA 1GFNA 3HWBA 2XG6A 4FOZA 4FRXA 4FT6A 3AA7B 3SYBA 4E1SA 2LFUA 2K0LA 2W80C 5G38A 4AYDC 3GP6A 3K19A 4FSPA 5JDPA 4E1TA 2KXPA 4O3WA 5DL6A 4D64A 4B61A 4FZNA 5G3AA 6PRNA 4KR8A 4F4BA 2R4LA 2Y0HA 3AA6B 3DA3A 1Q9FA 4RJWA 1MPFA 5D5DA 5GTIO 4FQEA 2F1VA 1OPFA 5G39A 3JTYA 2M07A 3KZIO 3SZDA 4C00A 5B5EO 3PQUA 3LK41 2LHFA 4LSIA 4O4UA 1GFOA 1ZHWA 1ZHYA 1QJ9A 3PORA 3VZWX 1OSMA 2FGQX 2KZ7A 5DL8A 2XTRA 4GCPA 4KR4A 3BRZA 2Y2XA 2KC0A 5DL5A 3AAEB 5E79O 3SY9A 2R8AA 4RL9A 5B66O 4PR7A 3AA0B 5FVNA 2IWVA 2MHLA 4K3CA 5KAIO 2YNKA 4GF4A 4RLBA 3QRAA 4O49A 1GFMA 3PQSA 2N2MA 4N59A 2R88A 4FSOA 3DWOX 2WJQA 1Q9GA 2XMXA 3LK3A 4FZMA 3RBHA 3VY8X 4D65A 2KXPB 3NSGA 2IWWA 3T20A 2QTKA 4GCSA 4PJ0O 3SY7A 4FZLA 2R4NA 4K3BA 4BUMX 4RLCA 5ADXL 2R89A 2J4UP 3QRCA 2F1TA 4O3ZA 2WVPA 5GTHO 4XNKA 3AAAA 3A2SX 3JCUO 1P4TA 3PGUA 4XNLA 5PRNA 5T5FA 2OMFA 2PORA 3O0EA 3UAQA 3WU2O 7PRNA 1E54A 1IZNA 3HW9A 1S5LO 2KZ7B 3LK2A 3DZMA 4RJXA 4IL6O 2PRNA 4N75A 4GHBA 5EE2A 1HXXA 4AKRA 1BT9A 2GE4A 2X9KA 2ERVA 2FGRA 1T16A 3TZGA 2Y0KA 2ZFGA 4JCHA 4N58A 3WI5A 3G7GA 4GCQA 5AFUL 4AFKA 5H2FO 4KRAA 1QJ8A 1GFQA 1MM4A 2JMMA 3VY9X 4G75A 2XE5A 3DWNA 4FUVA 4UB8O 3VZTX 3LK3B 1YS5A 1MM5A 5DL7A 4AYNA 4Z3TA 3A0HO 4FMSA 3HOLA 3PGSA 5IYUA 3PGRA 4C4VA 3VE2A 3BS0A 1T1LA 3NJTA 4AYID 4C69X 3V8UA
chains in the Genus database with same CATH topology
3SYSA 3AAEA 1HXUA 5G26A 3AA1A 3AAAB 1THQA 3T0SA 2KDYA 4D5UA 4FRTA 3POQA 1ZHXA 1IZNB 1ZHZA 2Y7SA 3KVDD 2YPVA 2Y0LA 3POUA 3AA7A 3POXA 1HXTA 4O4XA 4AKRB 1BH3A 1H6S1 2K4TA 2J1NA 3UPGA 4U9CA 4FESA 2XTQA 3T24A 3VZUX 1ZHTA 3AA6A 1GFPA 4JFBA 3UU2A 2ODJA 1BXWA 3EMNX 2M06A 4QQ1A 4LSFA 4LSHA 3FYXA 3PRNA 3SZVA 5GV0A 2MNHA 3VE1A 8PRNA 2O4VA 3LK42 4G76A 4O3YA 2N2LA 1QJPA 4AYMC 2ZLDA 2XE1A 4PUXA 1PHOA 3DA4A 3AA1B 3AA0A 2W81C 4LSEA 5ADXK 2XE2A 3HOEA 3LK2B 4AUIA 1ORMA 4AKMA 2X27X 4O3XB 3C5OA 3WI4A 1PRNA 2XE3A 4AZLA 1GFNA 3HWBA 2XG6A 4FOZA 4FRXA 4FT6A 3AA7B 3SYBA 4E1SA 2LFUA 2K0LA 2W80C 5JDPA 3GP6A 3K19A 4FSPA 4E1TA 2KXPA 4O3WA 5DL6A 4D64A 4B61A 4FZNA 6PRNA 4KR8A 4F4BA 2Y0HA 3AA6B 3DA3A 1Q9FA 4RJWA 1MPFA 5D5DA 3SZDA 4AYEC 2F1VA 1OPFA 5AFUK 3JTYA 2M07A 1G90A 3PQUA 3LK41 2LHFA 4LSIA 4O4UA 1GFOA 1ZHWA 1ZHYA 1QJ9A 3PORA 3VZWX 1OSMA 2FGQX 2KZ7A 5DL8A 2XTRA 4GCPA 4KR4A 3SY9A 2Y2XA 2KC0A 5DL5A 3AAEB 4RL9A 3AA0B 5FVNA 2MHLA 2YNKA 4GF4A 4RLBA 3QRAA 4O49A 1GFMA 3PQSA 2N2MA 4N59A 4FSOA 3RBHA 1Q9GA 2XMXA 3LK3A 4FZMA 3VY8X 4D65A 2KXPB 3NSGA 3T20A 2QTKA 4GCSA 3SY7A 4FZLA 5ADXL 4BUMX 4RLCA 2J4UP 3QRCA 2F1TA 4O3ZA 4XNKA 3AAAA 3A2SX 4XNLA 1P4TA 5PRNA 5T5FA 4AYDC 7PRNA 2OMFA 2PORA 3O0EA 3UAQA 1E54A 1IZNA 3HW9A 2KZ7B 3LK2A 4RJXA 2PRNA 4GHBA 5EE2A 1HXXA 4AKRA 1BT9A 2GE4A 2ERVA 2FGRA 3TZGA 2Y0KA 2ZFGA 4JCHA 4N58A 3WI5A 3G7GA 4GCQA 5AFUL 4AFKA 4KRAA 1QJ8A 1GFQA 1MM4A 2JMMA 3VY9X 4G75A 2XE5A 4FUVA 3VZTX 3LK3B 1YS5A 1MM5A 5DL7A 4AYNA 4Z3TA 4FMSA 3HOLA 5IYUA 3VE2A 4AYID 4C69X 3V8UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RLB A;  4FUV A;  4RL9 A; 
#chains in the Genus database with same CATH topology
 2R4P A;  3AAE A;  1HXU A;  5G26 A;  5KAF O;  3SYS A;  3AA1 A;  3AAA B;  1THQ A;  3T0S A;  2KDY A;  4D5U A;  5TIS O;  3A0B O;  4FRT A;  3POQ A;  1ZHX A;  1IZN B;  1ZHZ A;  2Y7S A;  3KVD D;  3PF1 A;  2YPV A;  2Y0L A;  1G90 A;  3POU A;  3AA7 A;  3POX A;  1HXT A;  4O4X A;  4AKR B;  3BRY A;  1BH3 A;  1H6S 1;  2K4T A;  2J1N A;  2R4O A;  3UPG A;  2WJR A;  4U9C A;  4FES A;  2XTQ A;  3T24 A;  4UB6 O;  3VZU X;  1ZHT A;  3AA6 A;  1GFP A;  4JFB A;  3UU2 A;  2ODJ A;  1BXW A;  3EMN X;  2M06 A;  4N74 A;  4QQ1 A;  4LSF A;  4LSH A;  3FYX A;  3PRN A;  3SZV A;  5AFU K;  2AXT O;  2F1C X;  2MNH A;  2O4V A;  3VE1 A;  3LK4 2;  8PRN A;  4G76 A;  5GV0 A;  4O3Y A;  2N2L A;  1QJP A;  4C4V B;  4AYM C;  2ZLD A;  2XE1 A;  4PUX A;  1PHO A;  3DA4 A;  3AA1 B;  3AA0 A;  2W81 C;  4LSE A;  5ADX K;  2JQY A;  4CTD A;  2XE2 A;  3HOE A;  3LK2 B;  4AUI A;  1ORM A;  4AKM A;  2X27 X;  4AYE C;  4O3X B;  3C5O A;  3WI4 A;  1PRN A;  2XE3 A;  4AZL A;  1GFN A;  3HWB A;  2XG6 A;  4FOZ A;  4FRX A;  4FT6 A;  3AA7 B;  3SYB A;  4E1S A;  2LFU A;  2K0L A;  2W80 C;  5G38 A;  4AYD C;  3GP6 A;  3K19 A;  4FSP A;  5JDP A;  4E1T A;  2KXP A;  4O3W A;  5DL6 A;  4D64 A;  4B61 A;  4FZN A;  5G3A A;  6PRN A;  4KR8 A;  4F4B A;  2R4L A;  2Y0H A;  3AA6 B;  3DA3 A;  1Q9F A;  4RJW A;  1MPF A;  5D5D A;  5GTI O;  4FQE A;  2F1V A;  1OPF A;  5G39 A;  3JTY A;  2M07 A;  3KZI O;  3SZD A;  4C00 A;  5B5E O;  3PQU A;  3LK4 1;  2LHF A;  4LSI A;  4O4U A;  1GFO A;  1ZHW A;  1ZHY A;  1QJ9 A;  3POR A;  3VZW X;  1OSM A;  2FGQ X;  2KZ7 A;  5DL8 A;  2XTR A;  4GCP A;  4KR4 A;  3BRZ A;  2Y2X A;  2KC0 A;  5DL5 A;  3AAE B;  5E79 O;  3SY9 A;  2R8A A;  4RL9 A;  5B66 O;  4PR7 A;  3AA0 B;  5FVN A;  2IWV A;  2MHL A;  4K3C A;  5KAI O;  2YNK A;  4GF4 A;  4RLB A;  3QRA A;  4O49 A;  1GFM A;  3PQS A;  2N2M A;  4N59 A;  2R88 A;  4FSO A;  3DWO X;  2WJQ A;  1Q9G A;  2XMX A;  3LK3 A;  4FZM A;  3RBH A;  3VY8 X;  4D65 A;  2KXP B;  3NSG A;  2IWW A;  3T20 A;  2QTK A;  4GCS A;  4PJ0 O;  3SY7 A;  4FZL A;  2R4N A;  4K3B A;  4BUM X;  4RLC A;  5ADX L;  2R89 A;  2J4U P;  3QRC A;  2F1T A;  4O3Z A;  2WVP A;  5GTH O;  4XNK A;  3AAA A;  3A2S X;  3JCU O;  1P4T A;  3PGU A;  4XNL A;  5PRN A;  5T5F A;  2OMF A;  2POR A;  3O0E A;  3UAQ A;  3WU2 O;  7PRN A;  1E54 A;  1IZN A;  3HW9 A;  1S5L O;  2KZ7 B;  3LK2 A;  3DZM A;  4RJX A;  4IL6 O;  2PRN A;  4N75 A;  4GHB A;  5EE2 A;  1HXX A;  4AKR A;  1BT9 A;  2GE4 A;  2X9K A;  2ERV A;  2FGR A;  1T16 A;  3TZG A;  2Y0K A;  2ZFG A;  4JCH A;  4N58 A;  3WI5 A;  3G7G A;  4GCQ A;  5AFU L;  4AFK A;  5H2F O;  4KRA A;  1QJ8 A;  1GFQ A;  1MM4 A;  2JMM A;  3VY9 X;  4G75 A;  2XE5 A;  3DWN A;  4FUV A;  4UB8 O;  3VZT X;  3LK3 B;  1YS5 A;  1MM5 A;  5DL7 A;  4AYN A;  4Z3T A;  3A0H O;  4FMS A;  3HOL A;  3PGS A;  5IYU A;  3PGR A;  4C4V A;  3VE2 A;  3BS0 A;  1T1L A;  3NJT A;  4AYI D;  4C69 X;  3V8U A; 
#chains in the Genus database with same CATH homology
 3SYS A;  3AAE A;  1HXU A;  5G26 A;  3AA1 A;  3AAA B;  1THQ A;  3T0S A;  2KDY A;  4D5U A;  4FRT A;  3POQ A;  1ZHX A;  1IZN B;  1ZHZ A;  2Y7S A;  3KVD D;  2YPV A;  2Y0L A;  3POU A;  3AA7 A;  3POX A;  1HXT A;  4O4X A;  4AKR B;  1BH3 A;  1H6S 1;  2K4T A;  2J1N A;  3UPG A;  4U9C A;  4FES A;  2XTQ A;  3T24 A;  3VZU X;  1ZHT A;  3AA6 A;  1GFP A;  4JFB A;  3UU2 A;  2ODJ A;  1BXW A;  3EMN X;  2M06 A;  4QQ1 A;  4LSF A;  4LSH A;  3FYX A;  3PRN A;  3SZV A;  5GV0 A;  2MNH A;  3VE1 A;  8PRN A;  2O4V A;  3LK4 2;  4G76 A;  4O3Y A;  2N2L A;  1QJP A;  4AYM C;  2ZLD A;  2XE1 A;  4PUX A;  1PHO A;  3DA4 A;  3AA1 B;  3AA0 A;  2W81 C;  4LSE A;  5ADX K;  2XE2 A;  3HOE A;  3LK2 B;  4AUI A;  1ORM A;  4AKM A;  2X27 X;  4O3X B;  3C5O A;  3WI4 A;  1PRN A;  2XE3 A;  4AZL A;  1GFN A;  3HWB A;  2XG6 A;  4FOZ A;  4FRX A;  4FT6 A;  3AA7 B;  3SYB A;  4E1S A;  2LFU A;  2K0L A;  2W80 C;  5JDP A;  3GP6 A;  3K19 A;  4FSP A;  4E1T A;  2KXP A;  4O3W A;  5DL6 A;  4D64 A;  4B61 A;  4FZN A;  6PRN A;  4KR8 A;  4F4B A;  2Y0H A;  3AA6 B;  3DA3 A;  1Q9F A;  4RJW A;  1MPF A;  5D5D A;  3SZD A;  4AYE C;  2F1V A;  1OPF A;  5AFU K;  3JTY A;  2M07 A;  1G90 A;  3PQU A;  3LK4 1;  2LHF A;  4LSI A;  4O4U A;  1GFO A;  1ZHW A;  1ZHY A;  1QJ9 A;  3POR A;  3VZW X;  1OSM A;  2FGQ X;  2KZ7 A;  5DL8 A;  2XTR A;  4GCP A;  4KR4 A;  3SY9 A;  2Y2X A;  2KC0 A;  5DL5 A;  3AAE B;  4RL9 A;  3AA0 B;  5FVN A;  2MHL A;  2YNK A;  4GF4 A;  4RLB A;  3QRA A;  4O49 A;  1GFM A;  3PQS A;  2N2M A;  4N59 A;  4FSO A;  3RBH A;  1Q9G A;  2XMX A;  3LK3 A;  4FZM A;  3VY8 X;  4D65 A;  2KXP B;  3NSG A;  3T20 A;  2QTK A;  4GCS A;  3SY7 A;  4FZL A;  5ADX L;  4BUM X;  4RLC A;  2J4U P;  3QRC A;  2F1T A;  4O3Z A;  4XNK A;  3AAA A;  3A2S X;  4XNL A;  1P4T A;  5PRN A;  5T5F A;  4AYD C;  7PRN A;  2OMF A;  2POR A;  3O0E A;  3UAQ A;  1E54 A;  1IZN A;  3HW9 A;  2KZ7 B;  3LK2 A;  4RJX A;  2PRN A;  4GHB A;  5EE2 A;  1HXX A;  4AKR A;  1BT9 A;  2GE4 A;  2ERV A;  2FGR A;  3TZG A;  2Y0K A;  2ZFG A;  4JCH A;  4N58 A;  3WI5 A;  3G7G A;  4GCQ A;  5AFU L;  4AFK A;  4KRA A;  1QJ8 A;  1GFQ A;  1MM4 A;  2JMM A;  3VY9 X;  4G75 A;  2XE5 A;  4FUV A;  3VZT X;  3LK3 B;  1YS5 A;  1MM5 A;  5DL7 A;  4AYN A;  4Z3T A;  4FMS A;  3HOL A;  5IYU A;  3VE2 A;  4AYI D;  4C69 X;  3V8U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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