4U3VA

Crystal structure of the trans-acyltransferase polyketide synthase enoyl-isomerase
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
257
structure length
242
Chain Sequence
QPVIQDQFTYDEPYVQGHVFNNERVLVGATYGSLAIEAFFNLFPEENSGRISKLSYISPIVIKQGETIELQAKPLQVIELQIMYREPSSGLWKPAAIGQCGIGSFEPKKVNIENVKHSLTKLHHIDGPEWGELFKTITHLYRDHKSILAKIRLPNGHHYTVSPLMTNSAYLAILSFLEQFDMTGGFLPFGINDIQFTKQTIKGDCWLLITLVKNTGDMLLFDVDVINESSETVLHYSGYSLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords Polyketide synthase PksR
publication title A Double-Hotdog with a New Trick: Structure and Mechanism of the trans-Acyltransferase Polyketide Synthase Enoyl-isomerase.
pubmed doi rcsb
source organism Bacillus subtilis
total genus 53
structure length 242
sequence length 257
ec nomenclature ec 2.3.1.-:
pdb deposition date 2014-07-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.129.110 Alpha Beta Roll Thiol Ester Dehydrase; Chain A Thiol Ester Dehydrase; Chain A 4u3vA00
5BP2A 4U3VA 3HRRA 3EL6A 3KG9A 2VZ9A 5E1VA 3KG6A 5KKUA 2VZ8A 3HRQA 4LN9A 5BP3A 4KC5A 4OOCA 3KG7A
chains in the Genus database with same CATH superfamily
5BP2A 4QDAA 3LWGA 2CY9A 3B7JA 3ED0A 1VH9A 1VI8A 3R3DA 5EO4A 1WLVA 3LBBA 5KKUA 1S5UA 4QD9A 3D6XA 3ZH5A 4GAHA 3ZH7A 2AV9A 4FFUA 5KL9A 4I4JA 4RLTB 5HZ4A 4B0IA 1Q4UA 2HBOA 3DOYA 1Y7UA 1ZKIA 4IENA 3D6LA 3CF8A 1BVQA 1NJKA 2C2IA 3BBJA 4HZPA 4MZQA 4W78A 4ORDA 2PZHA 3KV8A 1OHFA 5CPGA 2B3MA 1SC0A 3AZ9A 2DSLA 5SZVA 2HX5A 3KG9A 1S9CA 2FUJA 5T02A 2ESSA 2QQPA 3CF9A 3KUWA 4U3VA 4OOCA 2W3XA 4R4UA 4A0ZA 4E3EA 2F3XA 4XY6A 5EGKA 3U0AA 3R34A 4ZV3A 3LZ7A 3GEKA 3ESIA 3WEWA 5BUYA 4MTUA 3F5OA 2OWNA 3LMBA 2CWZA 4RLTA 3BJKA 3KVZA 4I45A 3BNVA 1MKBA 1WLUA 3RQBA 3R3FA 2VKZG 1YOCA 2FS2A 3AZBA 1Q4TA 4FQ9A 3KHPA 2PRXA 3KV7A 5HD6A 2XEMA 3DP1A 1VPMA 3KVUA 2OKHA 4K4CA 3R87A 1Q4SA 4B0CA 4ZJBA 2O6BA 2GLPA 3DP0A 4MOCA 5EO2A 4B0JA 4QD8A 2VZ9A 3OMLA 3TEAA 3E29A 3DKZA 2VZ8A 2B6EA 2GVHA 2V1OA 2EGRA 3P3IA 3Q62A 3R35A 4I83A 4KC5A 4RLJB 1C8UA 3P3FA 1IXLA 3P2QA 2OKIA 3EL6A 4K4DA 4RV2B 4K4AA 3R3BA 4K02A 3B7KA 3KH8A 2UV8G 3KUVA 4ZW0A 4YBVA 1T82A 1MKAA 2PIMA 3KX8A 5SZUA 3S6PA 4GAKA 4K00A 4RLWB 1IQ6A 1TBUA 4RMMA 5DM5A 3HDUA 5BUWA 3R37A 4B0BA 5BUXA 4XY5A 4KEHA 1Q6WA 2EGJA 3B18A 3KG8A 4QFWA 5DIOA 5SZYA 4A0YA 1LO7A 1PSUA 2XFLA 3KG6A 2OAFA 3HRQA 5EGJA 3AZAA 3KG7A 1J1YA 3R32A 1VH5A 3D04A 2Q2BA 3K67A 4NCPA 4RLJA 5EP5A 2EISA 4AE8A 2PFCA 1Z6BA 4RV2A 1ZHGA 3HM0A 3RD7A 4B8UA 4LN9A 5BYUA 5HMBA 4RLUB 4A0XA 1WM6A 3AZ8A 3HRRA 5HMCA 1PN2A 4M20A 3CK1A 1LO9A 3FRNA 4WNBB 5EGLA 2OIWA 4MOBA 4RLWA 2QQ2A 2GLVA 3P2RA 3CJYA 2BI0A 3LBEA 4R9ZA 3S4KA 1LO8A 2O6UA 4I82A 1Z54A 1PN4A 1SH8A 3ZH6A 4CL6A 3DOZA 3F1TA 4K4BA 5SZZA 1SBKA 3NWZA 5BP3A 4ZRBA 3KVIA 4AE7A 4HZNA 2EGIA 1WN3A 2H4UA 3DP2A 2HLJA 3KX7A 3P2SA 4QD7A 5T07A 5HWFA 2GLLA 3HMJG 3ZH7B 2GLMA 2GF6A 4HZOA 2Q78A 1U1ZA 1YLIA 3LW3A 5F6RA 2O6TA 4RLUA 4W78B 2OV9A 4ZRFA 4K49A 2F41A 2O5UA 3EXZA 3R3CA 2NUJA 4WNBA 3QOOA 3R36A 4OOBA 3E1EA 3KW1A 3QY3A 3IR3A 4H4GA 4QDBA 3E8PA 2CYEA 3SPSA 3R3AA 5E1VA 2QWZA 3DP3A 5T06A 4A12A 2F0XA
chains in the Genus database with same CATH topology
5BP2A 4R9ZA 3S6PA 3ZH6A 5KKUA 5BP3A 3ZH5A 3ZH7A 3RQBA 2VKZG 4QFWA 3B18A 3KG8A 3KG6A 3HMJG 3BBJA 3HRQA 3ZH7B 3KG7A 1OHFA 3KG9A 2VZ9A 2PFCA 3RD7A 2VZ8A 2QQPA 4LN9A 4KC5A 4OOCA 4U3VA 4R4UA 3HRRA 3EL6A 3FRNA 3U0AA 5E1VA 2UV8G 3CJYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5BP2 A;  4U3V A;  3HRR A;  3EL6 A;  3KG9 A;  2VZ9 A;  5E1V A;  3KG6 A;  5KKU A;  2VZ8 A;  3HRQ A;  4LN9 A;  5BP3 A;  4KC5 A;  4OOC A;  3KG7 A; 
#chains in the Genus database with same CATH topology
 5BP2 A;  4QDA A;  3LWG A;  2CY9 A;  3B7J A;  3ED0 A;  1VH9 A;  1VI8 A;  3R3D A;  5EO4 A;  1WLV A;  3LBB A;  5KKU A;  1S5U A;  4QD9 A;  3D6X A;  3ZH5 A;  4GAH A;  3ZH7 A;  2AV9 A;  4FFU A;  5KL9 A;  4I4J A;  4RLT B;  5HZ4 A;  4B0I A;  1Q4U A;  2HBO A;  3DOY A;  1Y7U A;  1ZKI A;  4IEN A;  3D6L A;  3CF8 A;  1BVQ A;  1NJK A;  2C2I A;  3BBJ A;  4HZP A;  4MZQ A;  4W78 A;  4ORD A;  2PZH A;  3KV8 A;  1OHF A;  5CPG A;  2B3M A;  1SC0 A;  3AZ9 A;  2DSL A;  5SZV A;  2HX5 A;  3KG9 A;  1S9C A;  2FUJ A;  5T02 A;  2ESS A;  2QQP A;  3CF9 A;  3KUW A;  4U3V A;  4OOC A;  2W3X A;  4R4U A;  4A0Z A;  4E3E A;  2F3X A;  4XY6 A;  5EGK A;  3U0A A;  3R34 A;  4ZV3 A;  3LZ7 A;  3GEK A;  3ESI A;  3WEW A;  5BUY A;  4MTU A;  3F5O A;  2OWN A;  3LMB A;  2CWZ A;  4RLT A;  3BJK A;  3KVZ A;  4I45 A;  3BNV A;  1MKB A;  1WLU A;  3RQB A;  3R3F A;  2VKZ G;  1YOC A;  2FS2 A;  3AZB A;  1Q4T A;  4FQ9 A;  3KHP A;  2PRX A;  3KV7 A;  5HD6 A;  2XEM A;  3DP1 A;  1VPM A;  3KVU A;  2OKH A;  4K4C A;  3R87 A;  1Q4S A;  4B0C A;  4ZJB A;  2O6B A;  2GLP A;  3DP0 A;  4MOC A;  5EO2 A;  4B0J A;  4QD8 A;  2VZ9 A;  3OML A;  3TEA A;  3E29 A;  3DKZ A;  2VZ8 A;  2B6E A;  2GVH A;  2V1O A;  2EGR A;  3P3I A;  3Q62 A;  3R35 A;  4I83 A;  4KC5 A;  4RLJ B;  1C8U A;  3P3F A;  1IXL A;  3P2Q A;  2OKI A;  3EL6 A;  4K4D A;  4RV2 B;  4K4A A;  3R3B A;  4K02 A;  3B7K A;  3KH8 A;  2UV8 G;  3KUV A;  4ZW0 A;  4YBV A;  1T82 A;  1MKA A;  2PIM A;  3KX8 A;  5SZU A;  3S6P A;  4GAK A;  4K00 A;  4RLW B;  1IQ6 A;  1TBU A;  4RMM A;  5DM5 A;  3HDU A;  5BUW A;  3R37 A;  4B0B A;  5BUX A;  4XY5 A;  4KEH A;  1Q6W A;  2EGJ A;  3B18 A;  3KG8 A;  4QFW A;  5DIO A;  5SZY A;  4A0Y A;  1LO7 A;  1PSU A;  2XFL A;  3KG6 A;  2OAF A;  3HRQ A;  5EGJ A;  3AZA A;  3KG7 A;  1J1Y A;  3R32 A;  1VH5 A;  3D04 A;  2Q2B A;  3K67 A;  4NCP A;  4RLJ A;  5EP5 A;  2EIS A;  4AE8 A;  2PFC A;  1Z6B A;  4RV2 A;  1ZHG A;  3HM0 A;  3RD7 A;  4B8U A;  4LN9 A;  5BYU A;  5HMB A;  4RLU B;  4A0X A;  1WM6 A;  3AZ8 A;  3HRR A;  5HMC A;  1PN2 A;  4M20 A;  3CK1 A;  1LO9 A;  3FRN A;  4WNB B;  5EGL A;  2OIW A;  4MOB A;  4RLW A;  2QQ2 A;  2GLV A;  3P2R A;  3CJY A;  2BI0 A;  3LBE A;  4R9Z A;  3S4K A;  1LO8 A;  2O6U A;  4I82 A;  1Z54 A;  1PN4 A;  1SH8 A;  3ZH6 A;  4CL6 A;  3DOZ A;  3F1T A;  4K4B A;  5SZZ A;  1SBK A;  3NWZ A;  5BP3 A;  4ZRB A;  3KVI A;  4AE7 A;  4HZN A;  2EGI A;  1WN3 A;  2H4U A;  3DP2 A;  2HLJ A;  3KX7 A;  3P2S A;  4QD7 A;  5T07 A;  5HWF A;  2GLL A;  3HMJ G;  3ZH7 B;  2GLM A;  2GF6 A;  4HZO A;  2Q78 A;  1U1Z A;  1YLI A;  3LW3 A;  5F6R A;  2O6T A;  4RLU A;  4W78 B;  2OV9 A;  4ZRF A;  4K49 A;  2F41 A;  2O5U A;  3EXZ A;  3R3C A;  2NUJ A;  4WNB A;  3QOO A;  3R36 A;  4OOB A;  3E1E A;  3KW1 A;  3QY3 A;  3IR3 A;  4H4G A;  4QDB A;  3E8P A;  2CYE A;  3SPS A;  3R3A A;  5E1V A;  2QWZ A;  3DP3 A;  5T06 A;  4A12 A;  2F0X A; 
#chains in the Genus database with same CATH homology
 5BP2 A;  4R9Z A;  3S6P A;  3ZH6 A;  5KKU A;  5BP3 A;  3ZH5 A;  3ZH7 A;  3RQB A;  2VKZ G;  4QFW A;  3B18 A;  3KG8 A;  3KG6 A;  3HMJ G;  3BBJ A;  3HRQ A;  3ZH7 B;  3KG7 A;  1OHF A;  3KG9 A;  2VZ9 A;  2PFC A;  3RD7 A;  2VZ8 A;  2QQP A;  4LN9 A;  4KC5 A;  4OOC A;  4U3V A;  4R4U A;  3HRR A;  3EL6 A;  3FRN A;  3U0A A;  5E1V A;  2UV8 G;  3CJY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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