4UFCA

Crystal structure of the gh95 enzyme bacova_03438
Total Genus 276
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
276
sequence length
787
structure length
787
Chain Sequence
DLKLWYSQPAQNWSEALPIGNSRLGAMVYGGIEREELQLNEETFWAGSPYNNNNPNAVHVLPVVRKLIFEGRNKEAQRLIDANFLTQQHGMSYLTLGSLYLEFPEHQNGSGFYRDLNLENATTTTRYQVDDVTYTRTTFASFTDNVIIMHIKASKANALNFTIAYNCPLVHKVNVQNDQLTVTCQGKEQEGLKAALRAECQIQVKTNGTLRPAGNTLQINEGTEATLYISAATNYVNYQDVSADESHRTSEYLKRAMQIPYEKALKNHIAYYKKQFDRVRLTLPAGKASQLETPKRIENFGNGEDMAMAALLFHYGRYLLISSSQPGGQPANLQGIWNNSTHAPWDSKYTININTEMNYWPAEVTNLSETHSPLFSMLKDLSVTGAETARTMYDCRGWVAHHNTDLWRICGVVDFAAAGMWPSGGAWLAQHIWQHYLFTGNKEFLKEYYPILKGTAQFYMDFLVEHPVYKWLVVSPSVSPEHGPITAGCTMDNQIAFDALHNTLLASYIAGEAPSFQDSLKQTLEKLPPMQIGKHNQLQEWLEDIDNPKDEHRHISHLYGLYPSNQISPYSNPELFQAARNTLLQRGDKATGWSIGWKVNFWARMLDGNHAFQIIKNMIQLLPNDHLAKEYPNGRTYPNMLDAHPPFQIDGNFGYTAGVAEMLLQSHDGAVHLLPALPDAWEEGSVKGLVARGNFTVDMDWKNNVLNKAIIRSNIGSTLRIRSYVPLKGKGLKQVNGKECSNRLFATTPIKQPLVAKGVSAQSPKLQKVYEYDIETKAGKTYIVNTI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords GH95
publication title Glycan Complexity Dictates Microbial Resource Allocation in the Large Intestine.
pubmed doi rcsb
source organism Bacteroides ovatus
total genus 276
structure length 787
sequence length 787
chains with identical sequence B
ec nomenclature
pdb deposition date 2015-03-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF14498 Glyco_hyd_65N_2 Glycosyl hydrolase family 65, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.98.50 Mainly Beta Distorted Sandwich Beta-galactosidase; Chain A, domain 5 putative glycoside hydrolase family protein from bacillus halodurans 4ufcA01
3W7SA 4UFCA 3W7XA 3W7TA 2EADA 2EACA 5CA3A 2EABA 3W7UA 3W7WA 2RDYA 5GW7A 2EAEA 3D3IA
chains in the Genus database with same CATH superfamily
2WW3A 5E1QA 1AVLA 4OK2A 1F4AA 3N9HA 3KN4A 2CWTA 3VD3A 3IAPA 1JZ5A 2OQEA 2FYVA 2D73A 3CZSA 1SNZA 2WCOA 3DX3A 4BZGA 1W5ZA 1NS4A 3WIQA 3AFLA 2WVZA 3QG0A 1R33A 3VD5A 3WFAA 2OW7A 3MV01 1QAKA 1IVXA 1V7VA 3W7SA 2CISA 2XSGA 1K1WA 1N7RA 3I3DA 1IVVA 3OB8A 1LXMA 2WVXB 1LXKA 3LVTA 3D4YA 1PU4A 1NSZA 3EJQA 3AFJA 2X03A 1WMPA 3MV11 1QALA 2WW2A 3X42A 1OJMA 1JYWA 3ACTA 2CG0A 3T2QA 1JYXA 2CWVA 1LF6A 5CA3A 1CB8A 1LOHA 2WGQA 3MUZ1 1KSIA 1UI7A 3D51A 3VD9A 2CFDA 3BS6A 1PS3A 3BVUA 4BZFA 3BLCA 4FNPA 3T0UA 3LOYA 2D1WA 3T08A 1H54A 1NS2A 1IQYA 1MMZA 3DDFA 1DYUA 2WDAA 3EJUA 4DUXA 1IU7A 2WW1A 1RJOA 2Y74A 4FNQA 3WVFA 1IVUA 4DUWA 1JZ3A 1JRQA 2E24A 3I3BA 4NEIA 4MMIA 3VD7A 1RW9A 1F4HA 3DYMA 2F7RA 3NJVA 1V7WA 1HXKA 2JKAA 2WYHA 1JZ2A 2EABA 1NS0A 2WO0A 1F1SA 1JZ4A 1HMUA 3AMOB 2WZSA 3BGAA 1HN0A 3BUPA 3I3EA 1TU5A 1EKMA 2ZXQA 1N7QA 3KIIA 1F9GA 1NSSA 2F7PA 2WOFA 1HMWA 3BVTA 2EACA 2CQTA 1W2ZA 3DYPA 2W0QA 1MMYA 1SIIA 4KFFA 3BUBA 1NSMA 3DX4A 3HI7A 2F7QA 3QFYA 2CIRA 5JMFA 1ULVA 3WA3A 1RWFA 3ACSA 1L7KA 1L7JA 3DX0A 1TXKA 1YQ2A 2BRWA 3BUIA 1AV4A 3QDEA 3S4AA 1HM2A 3DECA 2BRVX 3NBJA 2RDYA 1NSRA 3IMHA 2E22A 3EJTA 3T0BA 2Q1FA 2ALWA 2FUQA 2XN1A 4OK4A 3RSYA 3W7UA 3EJSA 3X40A 4J5TA 1MMXA 3CV5A 1TQSA 1EGUA 1MN0A 3DDGA 3K25A 3Q1NA 1LURA 1X1JA 4OJZA 2BRPA 3HIIA 2ZQ0A 3T2OA 3E7JA 1UI8A 1UG9A 4EV2A 1LF9A 2CG1A 2JKEA 1RWAA 1IVWA 3WA2X 3T09A 1TQVA 1N7NA 4KFDA 1PX4A 5JMDA 4FNUA 1JZ7A 3D52A 1IQXA 1C82A 4KTRA 1NSXA 4TTGA 1RWHA 1Z45A 3EJPA 1D6UA 2E2TA 1RWCA 3RRSA 4FNTA 4UFCA 3VDAA 1J0NA 2C11A 3SX1A 1RKYA 1O7DD 1X1HA 1HTYA 2XN0A 3J7HA 1LVNA 1QX1A 2EAEA 3BLBA 2PNCA 3VDBA 2F1BA 3BVXA 2F18A 2OOVC 1NS8A 3VSMA 3W7XA 4BZEA 3EJRA 1W6GA 4K35A 2YFNA 3X41A 2CQSA 1A2VA 1HM3A 3BUQA 2WVYA 3BVWA 3A0OA 3X3ZA 1JYVA 1K1YA 1QWNA 3OBAA 4DUVA 3IAQA 2WOHA 2OQEC 1TQTA 4BTWA 2CWUA 3CZJA 1N9EA 2XN2A 3VD4A 2XHNA 2CIQA 3SEPA 1I8QA 3DX1A 1MMUA 2YFOA 3DYOA 1W6CA 1HWWA 2BT3A 1PX3A 2OW6A 1YGAA 2E2UA 3ALAA 2WW0A 2ZL8A 2WVXA 3MWXA 1JOVA 3NJXA 3OS7A 4MMHA 1W7CA 3MI6A 4FNRA 3NREA 1JZ6A 1JYNA 2E2VA 3HIGA 1TQWA 4FNVA 1W4NA 3X3XA 1V7XA 1QAFA 1OJPA 3E1F1 3ECQA 2EADA 4EV5A 1NSUA 1X1IA 4BTXA 3D3IA 4K3AA 3DCDA 3DX2A 4KTPA 4AQ0A 3D4ZA 1NSVA 2HTBA 2HTAA 3W7WA 2CFGA 3VDCA 1SIHA 1R34A 3QFZA 1WMOA 3T2PA 2JKPA 3E80A 1NKGA 3PGBA 3W7TA 1WMNA 3TY1A 1SO0A 1QWUA 1HN1A 3SXXA 3X3YA 4BZHA 1D6ZA 1D6YA 3K5TA 1OJOA 5A1AA 2FUTA 2WYIA 2Y73A 3A24A 3WIRA 3MPHA 4FNSA 1OACA 1W3YA 3BUDA 3D50A 1SPUA 2CFLA 3VSNA 1J0MA 5KBPA 1DP0A 3AMOA 1TQUA 1OJNA 2CFWA 4KFEA 1N7OA 1AVKA 1K1XA 2YX9A 1N7PA 2C10A 3T0DA 5GW7A 3S4DA 2F1AA 3NBBA 1JZ8A 2OOVA 1US1A 3MUY1 4BTYA 3BVVA 3S4BA 1NS7A 3T0AA 3CZNA 2CFKA 2F7OA 3S4CA 1RWGA 4RNLA
chains in the Genus database with same CATH topology
3W7SA 4UFCA 3W7XA 3W7TA 2EADA 2EACA 5CA3A 2EABA 3W7UA 3W7WA 2RDYA 5GW7A 2EAEA 3D3IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3W7S A;  4UFC A;  3W7X A;  3W7T A;  2EAD A;  2EAC A;  5CA3 A;  2EAB A;  3W7U A;  3W7W A;  2RDY A;  5GW7 A;  2EAE A;  3D3I A; 
#chains in the Genus database with same CATH topology
 2WW3 A;  5E1Q A;  1AVL A;  4OK2 A;  1F4A A;  3N9H A;  3KN4 A;  2CWT A;  3VD3 A;  3IAP A;  1JZ5 A;  2OQE A;  2FYV A;  2D73 A;  3CZS A;  1SNZ A;  2WCO A;  3DX3 A;  4BZG A;  1W5Z A;  1NS4 A;  3WIQ A;  3AFL A;  2WVZ A;  3QG0 A;  1R33 A;  3VD5 A;  3WFA A;  2OW7 A;  3MV0 1;  1QAK A;  1IVX A;  1V7V A;  3W7S A;  2CIS A;  2XSG A;  1K1W A;  1N7R A;  3I3D A;  1IVV A;  3OB8 A;  1LXM A;  2WVX B;  1LXK A;  3LVT A;  3D4Y A;  1PU4 A;  1NSZ A;  3EJQ A;  3AFJ A;  2X03 A;  1WMP A;  3MV1 1;  1QAL A;  2WW2 A;  3X42 A;  1OJM A;  1JYW A;  3ACT A;  2CG0 A;  3T2Q A;  1JYX A;  2CWV A;  1LF6 A;  5CA3 A;  1CB8 A;  1LOH A;  2WGQ A;  3MUZ 1;  1KSI A;  1UI7 A;  3D51 A;  3VD9 A;  2CFD A;  3BS6 A;  1PS3 A;  3BVU A;  4BZF A;  3BLC A;  4FNP A;  3T0U A;  3LOY A;  2D1W A;  3T08 A;  1H54 A;  1NS2 A;  1IQY A;  1MMZ A;  3DDF A;  1DYU A;  2WDA A;  3EJU A;  4DUX A;  1IU7 A;  2WW1 A;  1RJO A;  2Y74 A;  4FNQ A;  3WVF A;  1IVU A;  4DUW A;  1JZ3 A;  1JRQ A;  2E24 A;  3I3B A;  4NEI A;  4MMI A;  3VD7 A;  1RW9 A;  1F4H A;  3DYM A;  2F7R A;  3NJV A;  1V7W A;  1HXK A;  2JKA A;  2WYH A;  1JZ2 A;  2EAB A;  1NS0 A;  2WO0 A;  1F1S A;  1JZ4 A;  1HMU A;  3AMO B;  2WZS A;  3BGA A;  1HN0 A;  3BUP A;  3I3E A;  1TU5 A;  1EKM A;  2ZXQ A;  1N7Q A;  3KII A;  1F9G A;  1NSS A;  2F7P A;  2WOF A;  1HMW A;  3BVT A;  2EAC A;  2CQT A;  1W2Z A;  3DYP A;  2W0Q A;  1MMY A;  1SII A;  4KFF A;  3BUB A;  1NSM A;  3DX4 A;  3HI7 A;  2F7Q A;  3QFY A;  2CIR A;  5JMF A;  1ULV A;  3WA3 A;  1RWF A;  3ACS A;  1L7K A;  1L7J A;  3DX0 A;  1TXK A;  1YQ2 A;  2BRW A;  3BUI A;  1AV4 A;  3QDE A;  3S4A A;  1HM2 A;  3DEC A;  2BRV X;  3NBJ A;  2RDY A;  1NSR A;  3IMH A;  2E22 A;  3EJT A;  3T0B A;  2Q1F A;  2ALW A;  2FUQ A;  2XN1 A;  4OK4 A;  3RSY A;  3W7U A;  3EJS A;  3X40 A;  4J5T A;  1MMX A;  3CV5 A;  1TQS A;  1EGU A;  1MN0 A;  3DDG A;  3K25 A;  3Q1N A;  1LUR A;  1X1J A;  4OJZ A;  2BRP A;  3HII A;  2ZQ0 A;  3T2O A;  3E7J A;  1UI8 A;  1UG9 A;  4EV2 A;  1LF9 A;  2CG1 A;  2JKE A;  1RWA A;  1IVW A;  3WA2 X;  3T09 A;  1TQV A;  1N7N A;  4KFD A;  1PX4 A;  5JMD A;  4FNU A;  1JZ7 A;  3D52 A;  1IQX A;  1C82 A;  4KTR A;  1NSX A;  4TTG A;  1RWH A;  1Z45 A;  3EJP A;  1D6U A;  2E2T A;  1RWC A;  3RRS A;  4FNT A;  4UFC A;  3VDA A;  1J0N A;  2C11 A;  3SX1 A;  1RKY A;  1O7D D;  1X1H A;  1HTY A;  2XN0 A;  3J7H A;  1LVN A;  1QX1 A;  2EAE A;  3BLB A;  2PNC A;  3VDB A;  2F1B A;  3BVX A;  2F18 A;  2OOV C;  1NS8 A;  3VSM A;  3W7X A;  4BZE A;  3EJR A;  1W6G A;  4K35 A;  2YFN A;  3X41 A;  2CQS A;  1A2V A;  1HM3 A;  3BUQ A;  2WVY A;  3BVW A;  3A0O A;  3X3Z A;  1JYV A;  1K1Y A;  1QWN A;  3OBA A;  4DUV A;  3IAQ A;  2WOH A;  2OQE C;  1TQT A;  4BTW A;  2CWU A;  3CZJ A;  1N9E A;  2XN2 A;  3VD4 A;  2XHN A;  2CIQ A;  3SEP A;  1I8Q A;  3DX1 A;  1MMU A;  2YFO A;  3DYO A;  1W6C A;  1HWW A;  2BT3 A;  1PX3 A;  2OW6 A;  1YGA A;  2E2U A;  3ALA A;  2WW0 A;  2ZL8 A;  2WVX A;  3MWX A;  1JOV A;  3NJX A;  3OS7 A;  4MMH A;  1W7C A;  3MI6 A;  4FNR A;  3NRE A;  1JZ6 A;  1JYN A;  2E2V A;  3HIG A;  1TQW A;  4FNV A;  1W4N A;  3X3X A;  1V7X A;  1QAF A;  1OJP A;  3E1F 1;  3ECQ A;  2EAD A;  4EV5 A;  1NSU A;  1X1I A;  4BTX A;  3D3I A;  4K3A A;  3DCD A;  3DX2 A;  4KTP A;  4AQ0 A;  3D4Z A;  1NSV A;  2HTB A;  2HTA A;  3W7W A;  2CFG A;  3VDC A;  1SIH A;  1R34 A;  3QFZ A;  1WMO A;  3T2P A;  2JKP A;  3E80 A;  1NKG A;  3PGB A;  3W7T A;  1WMN A;  3TY1 A;  1SO0 A;  1QWU A;  1HN1 A;  3SXX A;  3X3Y A;  4BZH A;  1D6Z A;  1D6Y A;  3K5T A;  1OJO A;  5A1A A;  2FUT A;  2WYI A;  2Y73 A;  3A24 A;  3WIR A;  3MPH A;  4FNS A;  1OAC A;  1W3Y A;  3BUD A;  3D50 A;  1SPU A;  2CFL A;  3VSN A;  1J0M A;  5KBP A;  1DP0 A;  3AMO A;  1TQU A;  1OJN A;  2CFW A;  4KFE A;  1N7O A;  1AVK A;  1K1X A;  2YX9 A;  1N7P A;  2C10 A;  3T0D A;  5GW7 A;  3S4D A;  2F1A A;  3NBB A;  1JZ8 A;  2OOV A;  1US1 A;  3MUY 1;  4BTY A;  3BVV A;  3S4B A;  1NS7 A;  3T0A A;  3CZN A;  2CFK A;  2F7O A;  3S4C A;  1RWG A;  4RNL A; 
#chains in the Genus database with same CATH homology
 3W7S A;  4UFC A;  3W7X A;  3W7T A;  2EAD A;  2EAC A;  5CA3 A;  2EAB A;  3W7U A;  3W7W A;  2RDY A;  5GW7 A;  2EAE A;  3D3I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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