4UFCA

Crystal structure of the gh95 enzyme bacova_03438
Total Genus 276
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
276
sequence length
787
structure length
787
Chain Sequence
DLKLWYSQPAQNWSEALPIGNSRLGAMVYGGIEREELQLNEETFWAGSPYNNNNPNAVHVLPVVRKLIFEGRNKEAQRLIDANFLTQQHGMSYLTLGSLYLEFPEHQNGSGFYRDLNLENATTTTRYQVDDVTYTRTTFASFTDNVIIMHIKASKANALNFTIAYNCPLVHKVNVQNDQLTVTCQGKEQEGLKAALRAECQIQVKTNGTLRPAGNTLQINEGTEATLYISAATNYVNYQDVSADESHRTSEYLKRAMQIPYEKALKNHIAYYKKQFDRVRLTLPAGKASQLETPKRIENFGNGEDMAMAALLFHYGRYLLISSSQPGGQPANLQGIWNNSTHAPWDSKYTININTEMNYWPAEVTNLSETHSPLFSMLKDLSVTGAETARTMYDCRGWVAHHNTDLWRICGVVDFAAAGMWPSGGAWLAQHIWQHYLFTGNKEFLKEYYPILKGTAQFYMDFLVEHPVYKWLVVSPSVSPEHGPITAGCTMDNQIAFDALHNTLLASYIAGEAPSFQDSLKQTLEKLPPMQIGKHNQLQEWLEDIDNPKDEHRHISHLYGLYPSNQISPYSNPELFQAARNTLLQRGDKATGWSIGWKVNFWARMLDGNHAFQIIKNMIQLLPNDHLAKEYPNGRTYPNMLDAHPPFQIDGNFGYTAGVAEMLLQSHDGAVHLLPALPDAWEEGSVKGLVARGNFTVDMDWKNNVLNKAIIRSNIGSTLRIRSYVPLKGKGLKQVNGKECSNRLFATTPIKQPLVAKGVSAQSPKLQKVYEYDIETKAGKTYIVNTI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords GH95
publication title Glycan Complexity Dictates Microbial Resource Allocation in the Large Intestine.
pubmed doi rcsb
source organism Bacteroides ovatus
molecule tags Hydrolase
total genus 276
structure length 787
sequence length 787
chains with identical sequence B
ec nomenclature
pdb deposition date 2015-03-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF14498 Glyco_hyd_65N_2 Glycosyl hydrolase family 65, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.98.50 Mainly Beta Distorted Sandwich Beta-galactosidase; Chain A, domain 5 putative glycoside hydrolase family protein from bacillus halodurans 4ufcA01
2EABA 2EAEA 5CA3A 3W7SA 2EACA 3W7UA 3W7TA 2RDYA 5GW7A 3W7XA 3W7WA 4UFCA 3D3IA 2EADA
chains in the Genus database with same CATH superfamily
3S4AA 1JYXA 2WZSA 2WYIA 3SXXA 3QFZA 3BLBA 1QAFA 3Q1NA 4DUXA 2JKPA 3DX3A 1AV4A 3E1F1 1K1WA 1N9EA 1TXKA 2EABA 3EJUA 2XHNA 1IVXA 1MMXA 3HIIA 4FNSA 1PU4A 3DECA 1RWAA 2F1AA 2CG0A 1JOVA 1CB8A 3DYPA 3BUDA 3EJPA 1TU5A 3T2PA 2YFNA 3HI7A 4KFDA 1MN0A 3X3XA 2EACA 2CFLA 1SIHA 1IVUA 1JZ2A 4KTRA 1IVWA 1H54A 2WW1A 3J7HA 3K5TA 3BGAA 1F1SA 2FYVA 3AMOA 2X03A 3WIRA 4FNQA 1NSRA 1HN1A 3OBAA 2E24A 3OB8A 1K1YA 1X1JA 3X3ZA 1HM2A 1QAKA 1MMYA 4FNPA 5JMFA 1N7RA 3VSNA 1ULVA 1OJOA 4BZEA 4NEIA 3DX1A 4FNRA 1IQYA 2W0QA 1US1A 3ALAA 1F4HA 1WMNA 2WVXA 3MI6A 2Y74A 1LF9A 1TQSA 1J0MA 4KFFA 3DX0A 1OACA 2XN0A 2FUTA 3KIIA 4FNVA 3AFLA 1F4AA 4FNTA 1RJOA 3CZNA 3MUZ1 2OQEC 2E2UA 2RDYA 4MMIA 3AFJA 2WGQA 3MWXA 3X41A 1KSIA 3QG0A 1JYWA 2BRPA 2EADA 1PX4A 1W6GA 1QALA 3BLCA 1NSXA 3W7SA 2BT3A 4FNUA 3T0DA 3SX1A 3A0OA 3CZSA 3VDCA 1OJNA 3IAPA 2EAEA 1NKGA 4K3AA 3DX4A 3AMOB 2ZQ0A 2F1BA 2ZXQA 3HIGA 4BTWA 1JZ7A 3BUBA 3NBBA 3I3BA 1R33A 3IAQA 2F7OA 2Q1FA 1HM3A 3BS6A 1HXKA 1IVVA 4BTXA 1K1XA 2F7PA 1AVKA 3WIQA 1NSUA 3DX2A 2OW6A 2WDAA 1V7VA 4KTPA 2BRVX 3CV5A 4EV2A 1D6YA 1W5ZA 4KFEA 2WOFA 3DYOA 2WVXB 3S4CA 1NS8A 1A2VA 1O7DD 1JZ4A 2FUQA 1W3YA 1MMZA 1UG9A 3CZJA 2XN1A 1OJMA 2OOVA 4BZFA 1QWNA 3MV01 2CFKA 3D3IA 1X1IA 2E2VA 3VSMA 3BVTA 1L7KA 4OJZA 3T09A 3OS7A 2CWVA 3VDAA 1SNZA 1LURA 3ECQA 2WW2A 1C82A 1YGAA 2YFOA 1NSVA 4OK2A 2BRWA 5JMDA 1V7XA 2JKAA 3EJTA 3T0BA 1PS3A 3X42A 1N7NA 5GW7A 3TY1A 2PNCA 1DP0A 2CQSA 3W7TA 4K35A 1SO0A 5E1QA 1SIIA 1LVNA 4BTYA 1N7PA 3SEPA 3D52A 3ACSA 3BVXA 3S4DA 1NS4A 2YX9A 2D73A 1D6UA 1JYNA 3NBJA 3I3DA 3S4BA 1LF6A 3EJRA 2XSGA 1RWFA 3T0UA 4EV5A 3VD7A 3MPHA 3VD9A 4BZHA 1R34A 2WW0A 3X3YA 2XN2A 3BVUA 2WO0A 3W7UA 5A1AA 1N7QA 3N9HA 2E2TA 1LXKA 3WVFA 1RW9A 4BZGA 3W7WA 4OK4A 1DYUA 1Z45A 2CISA 1NSSA 1UI7A 2F18A 3DDFA 1EKMA 2WYHA 3X40A 1NS7A 3ACTA 1NS2A 2WVZA 1NS0A 3E80A 4DUVA 3BUQA 1TQWA 1I8QA 3BUIA 1JYVA 1F9GA 1WMPA 4AQ0A 3D4ZA 3VDBA 3E7JA 2WCOA 1N7OA 3DYMA 1D6ZA 1IU7A 1TQUA 2F7RA 3I3EA 1IQXA 1NSZA 3NJXA 1LXMA 1YQ2A 3A24A 3PGBA 1J0NA 2CIQA 4RNLA 2CFGA 1JZ3A 3MUY1 3D51A 1SPUA 3D4YA 5CA3A 1RWGA 1JRQA 1OJPA 2C11A 1PX3A 3BVVA 2CFWA 1W7CA 2OW7A 1UI8A 1HTYA 3W7XA 2JKEA 1W2ZA 3MV11 3VD3A 3EJQA 2F7QA 3DDGA 3D50A 3QDEA 2Y73A 1WMOA 2ZL8A 2WOHA 2ALWA 2OOVC 2WW3A 3QFYA 3LVTA 2E22A 1QX1A 1TQVA 2CWTA 3WFAA 2CG1A 1HWWA 1V7WA 3NREA 3NJVA 2D1WA 2CIRA 3T2OA 3KN4A 2HTAA 1RKYA 4TTGA 3T08A 3BVWA 1EGUA 1QWUA 1W6CA 4MMHA 3WA3A 2OQEA 2CWUA 1HN0A 4UFCA 2C10A 3RRSA 1JZ8A 3WA2X 3LOYA 1JZ6A 3DCDA 1X1HA 1RWCA 2CFDA 1RWHA 1AVLA 2WVYA 3T0AA 5KBPA 1NSMA 3RSYA 1L7JA 4J5TA 1HMWA 4DUWA 2CQTA 3VD4A 1MMUA 3BUPA 3VD5A 3EJSA 1W4NA 1JZ5A 1LOHA 3K25A 2HTBA 1HMUA 3IMHA 1TQTA 3T2QA
chains in the Genus database with same CATH topology
2EABA 2EAEA 5CA3A 3W7SA 2EACA 3W7UA 3W7TA 2RDYA 5GW7A 3W7XA 3W7WA 4UFCA 3D3IA 2EADA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EAB A;  2EAE A;  5CA3 A;  3W7S A;  2EAC A;  3W7U A;  3W7T A;  2RDY A;  5GW7 A;  3W7X A;  3W7W A;  4UFC A;  3D3I A;  2EAD A; 
#chains in the Genus database with same CATH topology
 3S4A A;  1JYX A;  2WZS A;  2WYI A;  3SXX A;  3QFZ A;  3BLB A;  1QAF A;  3Q1N A;  4DUX A;  2JKP A;  3DX3 A;  1AV4 A;  3E1F 1;  1K1W A;  1N9E A;  1TXK A;  2EAB A;  3EJU A;  2XHN A;  1IVX A;  1MMX A;  3HII A;  4FNS A;  1PU4 A;  3DEC A;  1RWA A;  2F1A A;  2CG0 A;  1JOV A;  1CB8 A;  3DYP A;  3BUD A;  3EJP A;  1TU5 A;  3T2P A;  2YFN A;  3HI7 A;  4KFD A;  1MN0 A;  3X3X A;  2EAC A;  2CFL A;  1SIH A;  1IVU A;  1JZ2 A;  4KTR A;  1IVW A;  1H54 A;  2WW1 A;  3J7H A;  3K5T A;  3BGA A;  1F1S A;  2FYV A;  3AMO A;  2X03 A;  3WIR A;  4FNQ A;  1NSR A;  1HN1 A;  3OBA A;  2E24 A;  3OB8 A;  1K1Y A;  1X1J A;  3X3Z A;  1HM2 A;  1QAK A;  1MMY A;  4FNP A;  5JMF A;  1N7R A;  3VSN A;  1ULV A;  1OJO A;  4BZE A;  4NEI A;  3DX1 A;  4FNR A;  1IQY A;  2W0Q A;  1US1 A;  3ALA A;  1F4H A;  1WMN A;  2WVX A;  3MI6 A;  2Y74 A;  1LF9 A;  1TQS A;  1J0M A;  4KFF A;  3DX0 A;  1OAC A;  2XN0 A;  2FUT A;  3KII A;  4FNV A;  3AFL A;  1F4A A;  4FNT A;  1RJO A;  3CZN A;  3MUZ 1;  2OQE C;  2E2U A;  2RDY A;  4MMI A;  3AFJ A;  2WGQ A;  3MWX A;  3X41 A;  1KSI A;  3QG0 A;  1JYW A;  2BRP A;  2EAD A;  1PX4 A;  1W6G A;  1QAL A;  3BLC A;  1NSX A;  3W7S A;  2BT3 A;  4FNU A;  3T0D A;  3SX1 A;  3A0O A;  3CZS A;  3VDC A;  1OJN A;  3IAP A;  2EAE A;  1NKG A;  4K3A A;  3DX4 A;  3AMO B;  2ZQ0 A;  2F1B A;  2ZXQ A;  3HIG A;  4BTW A;  1JZ7 A;  3BUB A;  3NBB A;  3I3B A;  1R33 A;  3IAQ A;  2F7O A;  2Q1F A;  1HM3 A;  3BS6 A;  1HXK A;  1IVV A;  4BTX A;  1K1X A;  2F7P A;  1AVK A;  3WIQ A;  1NSU A;  3DX2 A;  2OW6 A;  2WDA A;  1V7V A;  4KTP A;  2BRV X;  3CV5 A;  4EV2 A;  1D6Y A;  1W5Z A;  4KFE A;  2WOF A;  3DYO A;  2WVX B;  3S4C A;  1NS8 A;  1A2V A;  1O7D D;  1JZ4 A;  2FUQ A;  1W3Y A;  1MMZ A;  1UG9 A;  3CZJ A;  2XN1 A;  1OJM A;  2OOV A;  4BZF A;  1QWN A;  3MV0 1;  2CFK A;  3D3I A;  1X1I A;  2E2V A;  3VSM A;  3BVT A;  1L7K A;  4OJZ A;  3T09 A;  3OS7 A;  2CWV A;  3VDA A;  1SNZ A;  1LUR A;  3ECQ A;  2WW2 A;  1C82 A;  1YGA A;  2YFO A;  1NSV A;  4OK2 A;  2BRW A;  5JMD A;  1V7X A;  2JKA A;  3EJT A;  3T0B A;  1PS3 A;  3X42 A;  1N7N A;  5GW7 A;  3TY1 A;  2PNC A;  1DP0 A;  2CQS A;  3W7T A;  4K35 A;  1SO0 A;  5E1Q A;  1SII A;  1LVN A;  4BTY A;  1N7P A;  3SEP A;  3D52 A;  3ACS A;  3BVX A;  3S4D A;  1NS4 A;  2YX9 A;  2D73 A;  1D6U A;  1JYN A;  3NBJ A;  3I3D A;  3S4B A;  1LF6 A;  3EJR A;  2XSG A;  1RWF A;  3T0U A;  4EV5 A;  3VD7 A;  3MPH A;  3VD9 A;  4BZH A;  1R34 A;  2WW0 A;  3X3Y A;  2XN2 A;  3BVU A;  2WO0 A;  3W7U A;  5A1A A;  1N7Q A;  3N9H A;  2E2T A;  1LXK A;  3WVF A;  1RW9 A;  4BZG A;  3W7W A;  4OK4 A;  1DYU A;  1Z45 A;  2CIS A;  1NSS A;  1UI7 A;  2F18 A;  3DDF A;  1EKM A;  2WYH A;  3X40 A;  1NS7 A;  3ACT A;  1NS2 A;  2WVZ A;  1NS0 A;  3E80 A;  4DUV A;  3BUQ A;  1TQW A;  1I8Q A;  3BUI A;  1JYV A;  1F9G A;  1WMP A;  4AQ0 A;  3D4Z A;  3VDB A;  3E7J A;  2WCO A;  1N7O A;  3DYM A;  1D6Z A;  1IU7 A;  1TQU A;  2F7R A;  3I3E A;  1IQX A;  1NSZ A;  3NJX A;  1LXM A;  1YQ2 A;  3A24 A;  3PGB A;  1J0N A;  2CIQ A;  4RNL A;  2CFG A;  1JZ3 A;  3MUY 1;  3D51 A;  1SPU A;  3D4Y A;  5CA3 A;  1RWG A;  1JRQ A;  1OJP A;  2C11 A;  1PX3 A;  3BVV A;  2CFW A;  1W7C A;  2OW7 A;  1UI8 A;  1HTY A;  3W7X A;  2JKE A;  1W2Z A;  3MV1 1;  3VD3 A;  3EJQ A;  2F7Q A;  3DDG A;  3D50 A;  3QDE A;  2Y73 A;  1WMO A;  2ZL8 A;  2WOH A;  2ALW A;  2OOV C;  2WW3 A;  3QFY A;  3LVT A;  2E22 A;  1QX1 A;  1TQV A;  2CWT A;  3WFA A;  2CG1 A;  1HWW A;  1V7W A;  3NRE A;  3NJV A;  2D1W A;  2CIR A;  3T2O A;  3KN4 A;  2HTA A;  1RKY A;  4TTG A;  3T08 A;  3BVW A;  1EGU A;  1QWU A;  1W6C A;  4MMH A;  3WA3 A;  2OQE A;  2CWU A;  1HN0 A;  4UFC A;  2C10 A;  3RRS A;  1JZ8 A;  3WA2 X;  3LOY A;  1JZ6 A;  3DCD A;  1X1H A;  1RWC A;  2CFD A;  1RWH A;  1AVL A;  2WVY A;  3T0A A;  5KBP A;  1NSM A;  3RSY A;  1L7J A;  4J5T A;  1HMW A;  4DUW A;  2CQT A;  3VD4 A;  1MMU A;  3BUP A;  3VD5 A;  3EJS A;  1W4N A;  1JZ5 A;  1LOH A;  3K25 A;  2HTB A;  1HMU A;  3IMH A;  1TQT A;  3T2Q A; 
#chains in the Genus database with same CATH homology
 2EAB A;  2EAE A;  5CA3 A;  3W7S A;  2EAC A;  3W7U A;  3W7T A;  2RDY A;  5GW7 A;  3W7X A;  3W7W A;  4UFC A;  3D3I A;  2EAD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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