4UFCA

Crystal structure of the gh95 enzyme bacova_03438
Total Genus 276
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
276
sequence length
787
structure length
787
Chain Sequence
b'DLKLWYSQPAQNWSEALPIGNSRLGAMVYGGIEREELQLNEETFWAGSPYNNNNPNAVHVLPVVRKLIFEGRNKEAQRLIDANFLTQQHGMSYLTLGSLYLEFPEHQNGSGFYRDLNLENATTTTRYQVDDVTYTRTTFASFTDNVIIMHIKASKANALNFTIAYNCPLVHKVNVQNDQLTVTCQGKEQEGLKAALRAECQIQVKTNGTLRPAGNTLQINEGTEATLYISAATNYVNYQDVSADESHRTSEYLKRAMQIPYEKALKNHIAYYKKQFDRVRLTLPAGKASQLETPKRIENFGNGEDMAMAALLFHYGRYLLISSSQPGGQPANLQGIWNNSTHAPWDSKYTININTEMNYWPAEVTNLSETHSPLFSMLKDLSVTGAETARTMYDCRGWVAHHNTDLWRICGVVDFAAAGMWPSGGAWLAQHIWQHYLFTGNKEFLKEYYPILKGTAQFYMDFLVEHPVYKWLVVSPSVSPEHGPITAGCTMDNQIAFDALHNTLLASYIAGEAPSFQDSLKQTLEKLPPMQIGKHNQLQEWLEDIDNPKDEHRHISHLYGLYPSNQISPYSNPELFQAARNTLLQRGDKATGWSIGWKVNFWARMLDGNHAFQIIKNMIQLLPNDHLAKEYPNGRTYPNMLDAHPPFQIDGNFGYTAGVAEMLLQSHDGAVHLLPALPDAWEEGSVKGLVARGNFTVDMDWKNNVLNKAIIRSNIGSTLRIRSYVPLKGKGLKQVNGKECSNRLFATTPIKQPLVAKGVSAQSPKLQKVYEYDIETKAGKTYIVNTI'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords GH95
publication title Glycan Complexity Dictates Microbial Resource Allocation in the Large Intestine.
pubmed doi rcsb
source organism Bacteroides ovatus
molecule tags Hydrolase
total genus 276
structure length 787
sequence length 787
chains with identical sequence B
ec nomenclature
pdb deposition date 2015-03-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF14498 Glyco_hyd_65N_2 Glycosyl hydrolase family 65, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.98.50 Mainly Beta Distorted Sandwich Beta-galactosidase; Chain A, domain 5 putative glycoside hydrolase family protein from bacillus halodurans 4ufcA01
3D3IA 3W7WA 2EADA 3W7SA 3W7XA 2EACA 3W7TA 2RDYA 3W7UA 2EABA 5GW7A 4UFCA 5CA3A 2EAEA
chains in the Genus database with same CATH superfamily
3T0UA 3DDGA 3BVVA 3AMOB 3BUIA 1YQ2A 2CFLA 1V7VA 2F7PA 3KN4A 4FNPA 1NSXA 3VD7A 3X3ZA 4TTGA 3D3IA 3VD5A 1HWWA 3DX4A 1NSUA 2CWVA 3MI6A 1QX1A 3HIGA 2ALWA 2EABA 3K5TA 1RWCA 4FNTA 3CZJA 3BVWA 2WYHA 3EJPA 2OW6A 2F1BA 2ZQ0A 3WIQA 1L7JA 1IQYA 1JZ4A 1SPUA 1JZ3A 1F4AA 3W7TA 1IQXA 3BVTA 3SXXA 3HIIA 1DYUA 2CG0A 1N7OA 1NSZA 1QWNA 4J5TA 3DX2A 1EGUA 2OQEC 2WDAA 4MMIA 1HMWA 1IVUA 2OOVC 3D52A 1LOHA 4KFEA 1PS3A 1WMNA 1HM3A 3ECQA 3TY1A 1W4NA 3WA2X 3OS7A 3NBJA 2F7OA 1JYVA 3CZNA 3SEPA 1HMUA 1IU7A 2D73A 2F7QA 2ZXQA 3BLBA 4BZHA 1PX3A 1HN0A 2WGQA 3HI7A 3EJUA 2WCOA 3VSNA 4KFDA 1QAKA 2F1AA 3PGBA 3OBAA 1I8QA 4BTWA 2YX9A 1UI7A 2CIRA 1X1HA 1L7KA 1MN0A 1SO0A 3BUQA 1NSSA 1MMXA 3S4AA 1OJPA 2BT3A 2YFNA 1W5ZA 2PNCA 2WVXA 3DX0A 5KBPA 1D6ZA 2HTAA 3VD9A 4FNQA 3VDBA 4KTRA 3VDAA 1TQUA 3WFAA 1LVNA 3S4DA 4BZFA 1RW9A 3D50A 5E1QA 3VD3A 1H54A 1JZ2A 3T08A 2E2UA 3AMOA 3S4BA 4BZGA 1OJNA 2FUTA 3BUDA 1R33A 3X40A 3NJVA 4DUXA 1OJMA 3N9HA 3T2QA 2WOHA 2F7RA 1TQTA 1NSMA 1JOVA 1QAFA 3DYPA 2C11A 1TQSA 3WIRA 2WOFA 3W7WA 1JRQA 2OQEA 1AVKA 3EJTA 2OOVA 3WA3A 1Z45A 4K3AA 3DX1A 2CIQA 1MMYA 2E2TA 4RNLA 1NS0A 1LURA 1PU4A 1HN1A 2CFWA 1W2ZA 2C10A 5JMFA 1KSIA 3A0OA 3E80A 3NREA 4EV2A 3ACSA 3AFJA 2WW2A 1NSRA 3X42A 2WVZA 1LXMA 2XN1A 2WW3A 2EADA 4K35A 4EV5A 1RWFA 1J0NA 4NEIA 2YFOA 1JYNA 1N7RA 1JYXA 3BVXA 1IVVA 1WMPA 3J7HA 3E7JA 1LF9A 3CV5A 3LVTA 1W6CA 1IVXA 1TQVA 1JYWA 3QFYA 2E22A 4KFFA 2WYIA 1MMZA 2XHNA 3MV01 5CA3A 4OK2A 3W7UA 1OACA 3RRSA 4AQ0A 4BTXA 3CZSA 3VDCA 2BRWA 1X1JA 2Y73A 4DUVA 2OW7A 3DYOA 3EJSA 2CFGA 1RWHA 2XN0A 3Q1NA 3OB8A 3DDFA 1SNZA 2BRPA 3ACTA 2WO0A 3IMHA 1AVLA 2XN2A 1NS7A 3SX1A 4KTPA 1WMOA 3T09A 1OJOA 1O7DD 3MPHA 1LF6A 3D51A 1NSVA 2F18A 3BVUA 1YGAA 4OJZA 1RKYA 1D6YA 1RWAA 5GW7A 2HTBA 3I3DA 3KIIA 3RSYA 3I3EA 3X41A 1W6GA 1X1IA 2CFKA 2E24A 3BUPA 1K1YA 3VD4A 3IAQA 3D4ZA 3T0BA 2Q1FA 3E1F1 1TU5A 2WW0A 2CWUA 2WVYA 1K1XA 2W0QA 3W7XA 2EACA 4FNRA 1TXKA 3ALAA 3DX3A 5A1AA 3I3BA 1F9GA 2XSGA 2JKEA 1F1SA 1R34A 1DP0A 1N9EA 3T0AA 4DUWA 1NS8A 3K25A 3EJRA 1N7QA 3BUBA 1HM2A 1LXKA 2CQSA 1QALA 4FNUA 3MUZ1 1W3YA 3QG0A 1EKMA 3EJQA 1A2VA 3DECA 2X03A 2CFDA 1AV4A 1NKGA 3T2PA 3MV11 3NBBA 1C82A 3AFLA 2CQTA 2D1WA 1MMUA 4BZEA 2WW1A 2FUQA 1W7CA 3MUY1 1QWUA 2CWTA 1RJOA 1F4HA 1ULVA 3T2OA 3BS6A 1V7XA 3D4YA 1NS2A 1V7WA 3BLCA 2BRVX 3T0DA 4FNSA 2FYVA 3QDEA 1JZ7A 2JKAA 3VSMA 3BGAA 1CB8A 1US1A 5JMDA 1NS4A 2RDYA 1N7NA 3LOYA 4OK4A 1UI8A 2CG1A 1SIIA 3X3XA 1J0MA 3NJXA 2WZSA 1PX4A 1TQWA 4FNVA 4BTYA 3DCDA 1IVWA 2WVXB 2ZL8A 3MWXA 1JZ8A 3DYMA 3WVFA 1JZ6A 1UG9A 4UFCA 1JZ5A 1N7PA 1HTYA 3IAPA 1SIHA 1HXKA 3S4CA 1K1WA 2JKPA 3QFZA 1RWGA 2CISA 3W7SA 4MMHA 3A24A 3X3YA 2E2VA 2Y74A 1D6UA 2EAEA
chains in the Genus database with same CATH topology
3D3IA 3W7WA 2EADA 3W7SA 3W7XA 2EACA 3W7TA 2RDYA 3W7UA 2EABA 5GW7A 4UFCA 5CA3A 2EAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3D3I A;  3W7W A;  2EAD A;  3W7S A;  3W7X A;  2EAC A;  3W7T A;  2RDY A;  3W7U A;  2EAB A;  5GW7 A;  4UFC A;  5CA3 A;  2EAE A; 
#chains in the Genus database with same CATH topology
 3T0U A;  3DDG A;  3BVV A;  3AMO B;  3BUI A;  1YQ2 A;  2CFL A;  1V7V A;  2F7P A;  3KN4 A;  4FNP A;  1NSX A;  3VD7 A;  3X3Z A;  4TTG A;  3D3I A;  3VD5 A;  1HWW A;  3DX4 A;  1NSU A;  2CWV A;  3MI6 A;  1QX1 A;  3HIG A;  2ALW A;  2EAB A;  3K5T A;  1RWC A;  4FNT A;  3CZJ A;  3BVW A;  2WYH A;  3EJP A;  2OW6 A;  2F1B A;  2ZQ0 A;  3WIQ A;  1L7J A;  1IQY A;  1JZ4 A;  1SPU A;  1JZ3 A;  1F4A A;  3W7T A;  1IQX A;  3BVT A;  3SXX A;  3HII A;  1DYU A;  2CG0 A;  1N7O A;  1NSZ A;  1QWN A;  4J5T A;  3DX2 A;  1EGU A;  2OQE C;  2WDA A;  4MMI A;  1HMW A;  1IVU A;  2OOV C;  3D52 A;  1LOH A;  4KFE A;  1PS3 A;  1WMN A;  1HM3 A;  3ECQ A;  3TY1 A;  1W4N A;  3WA2 X;  3OS7 A;  3NBJ A;  2F7O A;  1JYV A;  3CZN A;  3SEP A;  1HMU A;  1IU7 A;  2D73 A;  2F7Q A;  2ZXQ A;  3BLB A;  4BZH A;  1PX3 A;  1HN0 A;  2WGQ A;  3HI7 A;  3EJU A;  2WCO A;  3VSN A;  4KFD A;  1QAK A;  2F1A A;  3PGB A;  3OBA A;  1I8Q A;  4BTW A;  2YX9 A;  1UI7 A;  2CIR A;  1X1H A;  1L7K A;  1MN0 A;  1SO0 A;  3BUQ A;  1NSS A;  1MMX A;  3S4A A;  1OJP A;  2BT3 A;  2YFN A;  1W5Z A;  2PNC A;  2WVX A;  3DX0 A;  5KBP A;  1D6Z A;  2HTA A;  3VD9 A;  4FNQ A;  3VDB A;  4KTR A;  3VDA A;  1TQU A;  3WFA A;  1LVN A;  3S4D A;  4BZF A;  1RW9 A;  3D50 A;  5E1Q A;  3VD3 A;  1H54 A;  1JZ2 A;  3T08 A;  2E2U A;  3AMO A;  3S4B A;  4BZG A;  1OJN A;  2FUT A;  3BUD A;  1R33 A;  3X40 A;  3NJV A;  4DUX A;  1OJM A;  3N9H A;  3T2Q A;  2WOH A;  2F7R A;  1TQT A;  1NSM A;  1JOV A;  1QAF A;  3DYP A;  2C11 A;  1TQS A;  3WIR A;  2WOF A;  3W7W A;  1JRQ A;  2OQE A;  1AVK A;  3EJT A;  2OOV A;  3WA3 A;  1Z45 A;  4K3A A;  3DX1 A;  2CIQ A;  1MMY A;  2E2T A;  4RNL A;  1NS0 A;  1LUR A;  1PU4 A;  1HN1 A;  2CFW A;  1W2Z A;  2C10 A;  5JMF A;  1KSI A;  3A0O A;  3E80 A;  3NRE A;  4EV2 A;  3ACS A;  3AFJ A;  2WW2 A;  1NSR A;  3X42 A;  2WVZ A;  1LXM A;  2XN1 A;  2WW3 A;  2EAD A;  4K35 A;  4EV5 A;  1RWF A;  1J0N A;  4NEI A;  2YFO A;  1JYN A;  1N7R A;  1JYX A;  3BVX A;  1IVV A;  1WMP A;  3J7H A;  3E7J A;  1LF9 A;  3CV5 A;  3LVT A;  1W6C A;  1IVX A;  1TQV A;  1JYW A;  3QFY A;  2E22 A;  4KFF A;  2WYI A;  1MMZ A;  2XHN A;  3MV0 1;  5CA3 A;  4OK2 A;  3W7U A;  1OAC A;  3RRS A;  4AQ0 A;  4BTX A;  3CZS A;  3VDC A;  2BRW A;  1X1J A;  2Y73 A;  4DUV A;  2OW7 A;  3DYO A;  3EJS A;  2CFG A;  1RWH A;  2XN0 A;  3Q1N A;  3OB8 A;  3DDF A;  1SNZ A;  2BRP A;  3ACT A;  2WO0 A;  3IMH A;  1AVL A;  2XN2 A;  1NS7 A;  3SX1 A;  4KTP A;  1WMO A;  3T09 A;  1OJO A;  1O7D D;  3MPH A;  1LF6 A;  3D51 A;  1NSV A;  2F18 A;  3BVU A;  1YGA A;  4OJZ A;  1RKY A;  1D6Y A;  1RWA A;  5GW7 A;  2HTB A;  3I3D A;  3KII A;  3RSY A;  3I3E A;  3X41 A;  1W6G A;  1X1I A;  2CFK A;  2E24 A;  3BUP A;  1K1Y A;  3VD4 A;  3IAQ A;  3D4Z A;  3T0B A;  2Q1F A;  3E1F 1;  1TU5 A;  2WW0 A;  2CWU A;  2WVY A;  1K1X A;  2W0Q A;  3W7X A;  2EAC A;  4FNR A;  1TXK A;  3ALA A;  3DX3 A;  5A1A A;  3I3B A;  1F9G A;  2XSG A;  2JKE A;  1F1S A;  1R34 A;  1DP0 A;  1N9E A;  3T0A A;  4DUW A;  1NS8 A;  3K25 A;  3EJR A;  1N7Q A;  3BUB A;  1HM2 A;  1LXK A;  2CQS A;  1QAL A;  4FNU A;  3MUZ 1;  1W3Y A;  3QG0 A;  1EKM A;  3EJQ A;  1A2V A;  3DEC A;  2X03 A;  2CFD A;  1AV4 A;  1NKG A;  3T2P A;  3MV1 1;  3NBB A;  1C82 A;  3AFL A;  2CQT A;  2D1W A;  1MMU A;  4BZE A;  2WW1 A;  2FUQ A;  1W7C A;  3MUY 1;  1QWU A;  2CWT A;  1RJO A;  1F4H A;  1ULV A;  3T2O A;  3BS6 A;  1V7X A;  3D4Y A;  1NS2 A;  1V7W A;  3BLC A;  2BRV X;  3T0D A;  4FNS A;  2FYV A;  3QDE A;  1JZ7 A;  2JKA A;  3VSM A;  3BGA A;  1CB8 A;  1US1 A;  5JMD A;  1NS4 A;  2RDY A;  1N7N A;  3LOY A;  4OK4 A;  1UI8 A;  2CG1 A;  1SII A;  3X3X A;  1J0M A;  3NJX A;  2WZS A;  1PX4 A;  1TQW A;  4FNV A;  4BTY A;  3DCD A;  1IVW A;  2WVX B;  2ZL8 A;  3MWX A;  1JZ8 A;  3DYM A;  3WVF A;  1JZ6 A;  1UG9 A;  4UFC A;  1JZ5 A;  1N7P A;  1HTY A;  3IAP A;  1SIH A;  1HXK A;  3S4C A;  1K1W A;  2JKP A;  3QFZ A;  1RWG A;  2CIS A;  3W7S A;  4MMH A;  3A24 A;  3X3Y A;  2E2V A;  2Y74 A;  1D6U A;  2EAE A; 
#chains in the Genus database with same CATH homology
 3D3I A;  3W7W A;  2EAD A;  3W7S A;  3W7X A;  2EAC A;  3W7T A;  2RDY A;  3W7U A;  2EAB A;  5GW7 A;  4UFC A;  5CA3 A;  2EAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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