4UPLA

Dimeric sulfatase spas2 from silicibacter pomeroyi
Total Genus 201
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
201
sequence length
555
structure length
555
Chain Sequence
b'TAVMNILFIMFDQLRWDYLSCYGHKTLNTPHIDRLAAKGVRFDRAYIQSPICGSSRMSTYTGRYVHSHGASWNGIPLKVGEMTMGDHLRAAGMGCWLVGKTHMRADEEGMARLGLEPDSLIGARVAECGFDVFERDDGMLPEGPDGYYDPDGAKEYNKFLRAKGYESDNPWHDFANSGLDDEGNVQSGWFLKNATRPANIAEEDSETPYLTSRAMEFIEQQTGPWCCHLSYIKPHWPYIVPEPYASMFGPEHVQDVVRSDSERQNAHPLFKAFMDTKVGEAFSRQEVRDAVIPAYMGLIKQADDQMGRLFKWLEDTGRMQDTMIVLTSDHGDFLGDHWMGEKTFFHDASTRVPLIIYDPRPEADATRGSVCDALVESIDLAPTFVEAAGGKPAMHILEGESLIPILHGARDHTLRDHVICEYDFSASPIAHLNDISVRQAVMFMVADKNWKLIHFEADPRPMLFDLKNDPQELVDLGGDPAHADVIAGMYDKLFRWTRRQSQRTTRSEEQLIAMRTKSRKRGIVLGIYDENETPLELTVKYRDRKARPYKDYLKG'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Balancing Specificity and Promiscuity in Enzyme Evolution: Multidimensional Activity Transitions in the Alkaline Phosphatase Superfamily.
pubmed doi rcsb
molecule keywords SULFATASE FAMILY PROTEIN
source organism Ruegeria pomeroyi
molecule tags Hydrolase
total genus 201
structure length 555
sequence length 555
chains with identical sequence C
ec nomenclature
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00884 Sulfatase Sulfatase
A PF16347 DUF4976 Domain of unknown function (DUF4976)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 4uplA01
2D1GA 5LIAA 2W5VA 3TG0A 1B8JA 4LRFA 3BDFA 5IJQA 1KHLA 3WAXA 3WBHA 3MK1A 5HRTA 2ANHA 3NKRA 5IJSA 4LR8A 2GA3A 3IGZB 5GOVA 4LR7A 3NKPA 1Y7AA 1EW8A 3NVLA 2RH6A 4MHXA 2GSOA 3WAYA 4CYSA 4ZG7A 2GSUA 4LQYA 4NWXA 1SHQA 5EGHA 4CXUA 3T00A 4LR9A 1HJKA 1EQJA 4FDIA 3ED4A 1HQAA 1URBA 4LRBA 2W5WA 1ELZA 4TN0A 3CMRA 4MY4A 3WAWA 2W5RA 4N7TA 1KH5A 1AJAA 2W5TA 1AJCA 3E2DA 5KXAA 5L0EA 3TX0A 3UN3A 4ZG6A 3M8YA 1K7HA 4UPLA 3DPCA 1KHJA 3SZYA 3SZZA 2G9YA 4LRCA 1SHNA 3A52A 4ZG9A 4MIVA 3B5QA 3OT9A 3UN2A 2IFYA 5L0KA 4GTYA 2IUCB 1AJBA 3NKOA 5TJ3A 1ELYA 5DLVA 5LRNA 5K4PA 1ED9A 3MK2A 3UNYA 4GTXA 1EI6A 3LXQA 1EW9A 3BDGA 1ALJA 4LRAA 2GLQA 1KHKA 4CXSA 5INHA 4KM4A 1E33P 2XRGA 1HDHA 3BDHA 4UPHA 1FSUA 1N2LA 3IGYB 2W8SA 3NKNA 5L0BA 4UPKA 3M8ZA 1AJDA 3NKMA 3MK0A 3KD8A 4QAXA 2W8DA 4UORA 5C66A 1ANIA 1KH9A 3T02A 3T01A 1KHNA 2GSNA 4KJDA 4KAVA 5AJ9A 1ED8A 1ANJA 1URAA 4LR2A 2X98A 1ALKA 1O99A 5DLWA 1ALHA 1Y6VA 2W5QA 1O98A 4KAYA 1E1ZP 4UPIA 4B56A 1N2KA 1ALIA 3WAVA 4CYRA 1E3CP 1EW2A 1KH7A 1KH4A 4CXKA 4UOOA 3M7VA 1AUKA 5LQQA 2XR9A 4NWJA 3Q3QA 4GTWA 1ZEBA 3UN5A 4ZGAA 3M8WA 2W5XA 1P49A 4LREA 2QZUA 2VQRA 4GTZA 5EGEA 1ZEDA 2IUCA 3TWZA 1E2SP 3DYCA 1ZEFA 5DLTA 2ZKTA 4LRDA 1EJJA 3IDDA 4UOPA 3BDGB 3UO0A 2W5SA 5LRMA 4YR1A 5GRRA 1ELXA 3NKQA 4KJGA 4FDJA
chains in the Genus database with same CATH superfamily
2D1GA 5LIAA 2W5VA 3TG0A 1B8JA 4LRFA 3BDFA 5IJQA 1KHLA 3WAXA 3WBHA 3MK1A 5HRTA 2ANHA 3NKRA 5IJSA 4LR8A 2GA3A 3IGZB 5GOVA 4LR7A 3NKPA 1Y7AA 1EW8A 3NVLA 2RH6A 4MHXA 2GSOA 3WAYA 4CYSA 4ZG7A 2GSUA 4LQYA 4NWXA 1SHQA 5EGHA 4CXUA 3T00A 4LR9A 1HJKA 1EQJA 4FDIA 3ED4A 1HQAA 1URBA 4LRBA 2W5WA 1ELZA 4TN0A 3CMRA 4MY4A 3WAWA 2W5RA 4N7TA 1KH5A 1AJAA 2W5TA 1AJCA 3E2DA 5KXAA 5L0EA 3TX0A 3UN3A 4ZG6A 3M8YA 1K7HA 4UPLA 3DPCA 1KHJA 3SZYA 3SZZA 2G9YA 4LRCA 1SHNA 3A52A 4ZG9A 4MIVA 3B5QA 3OT9A 3UN2A 2IFYA 5L0KA 4GTYA 2IUCB 1AJBA 3NKOA 5TJ3A 1ELYA 5DLVA 5LRNA 5K4PA 1ED9A 3MK2A 3UNYA 4GTXA 1EI6A 3LXQA 1EW9A 3BDGA 1ALJA 4LRAA 2GLQA 1KHKA 4CXSA 5INHA 4KM4A 1E33P 2XRGA 1HDHA 3BDHA 4UPHA 1FSUA 1N2LA 3IGYB 2W8SA 3NKNA 5L0BA 4UPKA 3M8ZA 1AJDA 3NKMA 3MK0A 3KD8A 4QAXA 2W8DA 4UORA 5C66A 1ANIA 1KH9A 3T02A 3T01A 1KHNA 2GSNA 4KJDA 4KAVA 5AJ9A 1ED8A 1ANJA 1URAA 4LR2A 2X98A 1ALKA 1O99A 5DLWA 1ALHA 1Y6VA 2W5QA 1O98A 4KAYA 1E1ZP 4UPIA 4B56A 1N2KA 1ALIA 3WAVA 4CYRA 1E3CP 1EW2A 1KH7A 1KH4A 4CXKA 4UOOA 3M7VA 1AUKA 5LQQA 2XR9A 4NWJA 3Q3QA 4GTWA 1ZEBA 3UN5A 4ZGAA 3M8WA 2W5XA 1P49A 4LREA 2QZUA 2VQRA 4GTZA 5EGEA 1ZEDA 2IUCA 3TWZA 1E2SP 3DYCA 1ZEFA 5DLTA 2ZKTA 4LRDA 1EJJA 3IDDA 4UOPA 3BDGB 3UO0A 2W5SA 5LRMA 4YR1A 5GRRA 1ELXA 3NKQA 4KJGA 4FDJA
chains in the Genus database with same CATH topology
2D1GA 5LIAA 2W5VA 3TG0A 1B8JA 4LRFA 3BDFA 5IJQA 1KHLA 3WAXA 3WBHA 3MK1A 5HRTA 2ANHA 3NKRA 5IJSA 4LR8A 2GA3A 3IGZB 5GOVA 4LR7A 3NKPA 1Y7AA 1EW8A 3NVLA 2RH6A 4MHXA 2GSOA 3WAYA 4CYSA 4ZG7A 2GSUA 4LQYA 4NWXA 1SHQA 5EGHA 4CXUA 3T00A 4LR9A 1HJKA 1EQJA 4FDIA 3ED4A 1HQAA 1URBA 4LRBA 2W5WA 1ELZA 4TN0A 3CMRA 4MY4A 3WAWA 2W5RA 4N7TA 1KH5A 1AJAA 2W5TA 1AJCA 3E2DA 5KXAA 5L0EA 3TX0A 3UN3A 4ZG6A 3M8YA 1K7HA 4UPLA 3DPCA 1KHJA 3SZYA 3SZZA 2G9YA 4LRCA 1SHNA 3A52A 4ZG9A 4MIVA 3B5QA 3OT9A 3UN2A 2IFYA 5L0KA 4GTYA 2IUCB 1AJBA 3NKOA 5TJ3A 1ELYA 5DLVA 5LRNA 5K4PA 1ED9A 3MK2A 3UNYA 4GTXA 1EI6A 3LXQA 1EW9A 3BDGA 1ALJA 4LRAA 2GLQA 1KHKA 4CXSA 5INHA 4KM4A 1E33P 2XRGA 1HDHA 3BDHA 4UPHA 1FSUA 1N2LA 3IGYB 2W8SA 3NKNA 5L0BA 4UPKA 3M8ZA 1AJDA 3NKMA 3MK0A 3KD8A 4QAXA 2W8DA 4UORA 5C66A 1ANIA 1KH9A 3T02A 3T01A 1KHNA 2GSNA 4KJDA 4KAVA 5AJ9A 1ED8A 1ANJA 1URAA 4LR2A 2X98A 1ALKA 1O99A 5DLWA 1ALHA 1Y6VA 2W5QA 1O98A 4KAYA 1E1ZP 4UPIA 4B56A 1N2KA 1ALIA 3WAVA 4CYRA 1E3CP 1EW2A 1KH7A 1KH4A 4CXKA 4UOOA 3M7VA 1AUKA 5LQQA 2XR9A 4NWJA 3Q3QA 4GTWA 1ZEBA 3UN5A 4ZGAA 3M8WA 2W5XA 1P49A 4LREA 2QZUA 2VQRA 4GTZA 5EGEA 1ZEDA 2IUCA 3TWZA 1E2SP 3DYCA 1ZEFA 5DLTA 2ZKTA 4LRDA 1EJJA 3IDDA 4UOPA 3BDGB 3UO0A 2W5SA 5LRMA 4YR1A 5GRRA 1ELXA 3NKQA 4KJGA 4FDJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2D1G A;  5LIA A;  2W5V A;  3TG0 A;  1B8J A;  4LRF A;  3BDF A;  5IJQ A;  1KHL A;  3WAX A;  3WBH A;  3MK1 A;  5HRT A;  2ANH A;  3NKR A;  5IJS A;  4LR8 A;  2GA3 A;  3IGZ B;  5GOV A;  4LR7 A;  3NKP A;  1Y7A A;  1EW8 A;  3NVL A;  2RH6 A;  4MHX A;  2GSO A;  3WAY A;  4CYS A;  4ZG7 A;  2GSU A;  4LQY A;  4NWX A;  1SHQ A;  5EGH A;  4CXU A;  3T00 A;  4LR9 A;  1HJK A;  1EQJ A;  4FDI A;  3ED4 A;  1HQA A;  1URB A;  4LRB A;  2W5W A;  1ELZ A;  4TN0 A;  3CMR A;  4MY4 A;  3WAW A;  2W5R A;  4N7T A;  1KH5 A;  1AJA A;  2W5T A;  1AJC A;  3E2D A;  5KXA A;  5L0E A;  3TX0 A;  3UN3 A;  4ZG6 A;  3M8Y A;  1K7H A;  4UPL A;  3DPC A;  1KHJ A;  3SZY A;  3SZZ A;  2G9Y A;  4LRC A;  1SHN A;  3A52 A;  4ZG9 A;  4MIV A;  3B5Q A;  3OT9 A;  3UN2 A;  2IFY A;  5L0K A;  4GTY A;  2IUC B;  1AJB A;  3NKO A;  5TJ3 A;  1ELY A;  5DLV A;  5LRN A;  5K4P A;  1ED9 A;  3MK2 A;  3UNY A;  4GTX A;  1EI6 A;  3LXQ A;  1EW9 A;  3BDG A;  1ALJ A;  4LRA A;  2GLQ A;  1KHK A;  4CXS A;  5INH A;  4KM4 A;  1E33 P;  2XRG A;  1HDH A;  3BDH A;  4UPH A;  1FSU A;  1N2L A;  3IGY B;  2W8S A;  3NKN A;  5L0B A;  4UPK A;  3M8Z A;  1AJD A;  3NKM A;  3MK0 A;  3KD8 A;  4QAX A;  2W8D A;  4UOR A;  5C66 A;  1ANI A;  1KH9 A;  3T02 A;  3T01 A;  1KHN A;  2GSN A;  4KJD A;  4KAV A;  5AJ9 A;  1ED8 A;  1ANJ A;  1URA A;  4LR2 A;  2X98 A;  1ALK A;  1O99 A;  5DLW A;  1ALH A;  1Y6V A;  2W5Q A;  1O98 A;  4KAY A;  1E1Z P;  4UPI A;  4B56 A;  1N2K A;  1ALI A;  3WAV A;  4CYR A;  1E3C P;  1EW2 A;  1KH7 A;  1KH4 A;  4CXK A;  4UOO A;  3M7V A;  1AUK A;  5LQQ A;  2XR9 A;  4NWJ A;  3Q3Q A;  4GTW A;  1ZEB A;  3UN5 A;  4ZGA A;  3M8W A;  2W5X A;  1P49 A;  4LRE A;  2QZU A;  2VQR A;  4GTZ A;  5EGE A;  1ZED A;  2IUC A;  3TWZ A;  1E2S P;  3DYC A;  1ZEF A;  5DLT A;  2ZKT A;  4LRD A;  1EJJ A;  3IDD A;  4UOP A;  3BDG B;  3UO0 A;  2W5S A;  5LRM A;  4YR1 A;  5GRR A;  1ELX A;  3NKQ A;  4KJG A;  4FDJ A; 
#chains in the Genus database with same CATH topology
 2D1G A;  5LIA A;  2W5V A;  3TG0 A;  1B8J A;  4LRF A;  3BDF A;  5IJQ A;  1KHL A;  3WAX A;  3WBH A;  3MK1 A;  5HRT A;  2ANH A;  3NKR A;  5IJS A;  4LR8 A;  2GA3 A;  3IGZ B;  5GOV A;  4LR7 A;  3NKP A;  1Y7A A;  1EW8 A;  3NVL A;  2RH6 A;  4MHX A;  2GSO A;  3WAY A;  4CYS A;  4ZG7 A;  2GSU A;  4LQY A;  4NWX A;  1SHQ A;  5EGH A;  4CXU A;  3T00 A;  4LR9 A;  1HJK A;  1EQJ A;  4FDI A;  3ED4 A;  1HQA A;  1URB A;  4LRB A;  2W5W A;  1ELZ A;  4TN0 A;  3CMR A;  4MY4 A;  3WAW A;  2W5R A;  4N7T A;  1KH5 A;  1AJA A;  2W5T A;  1AJC A;  3E2D A;  5KXA A;  5L0E A;  3TX0 A;  3UN3 A;  4ZG6 A;  3M8Y A;  1K7H A;  4UPL A;  3DPC A;  1KHJ A;  3SZY A;  3SZZ A;  2G9Y A;  4LRC A;  1SHN A;  3A52 A;  4ZG9 A;  4MIV A;  3B5Q A;  3OT9 A;  3UN2 A;  2IFY A;  5L0K A;  4GTY A;  2IUC B;  1AJB A;  3NKO A;  5TJ3 A;  1ELY A;  5DLV A;  5LRN A;  5K4P A;  1ED9 A;  3MK2 A;  3UNY A;  4GTX A;  1EI6 A;  3LXQ A;  1EW9 A;  3BDG A;  1ALJ A;  4LRA A;  2GLQ A;  1KHK A;  4CXS A;  5INH A;  4KM4 A;  1E33 P;  2XRG A;  1HDH A;  3BDH A;  4UPH A;  1FSU A;  1N2L A;  3IGY B;  2W8S A;  3NKN A;  5L0B A;  4UPK A;  3M8Z A;  1AJD A;  3NKM A;  3MK0 A;  3KD8 A;  4QAX A;  2W8D A;  4UOR A;  5C66 A;  1ANI A;  1KH9 A;  3T02 A;  3T01 A;  1KHN A;  2GSN A;  4KJD A;  4KAV A;  5AJ9 A;  1ED8 A;  1ANJ A;  1URA A;  4LR2 A;  2X98 A;  1ALK A;  1O99 A;  5DLW A;  1ALH A;  1Y6V A;  2W5Q A;  1O98 A;  4KAY A;  1E1Z P;  4UPI A;  4B56 A;  1N2K A;  1ALI A;  3WAV A;  4CYR A;  1E3C P;  1EW2 A;  1KH7 A;  1KH4 A;  4CXK A;  4UOO A;  3M7V A;  1AUK A;  5LQQ A;  2XR9 A;  4NWJ A;  3Q3Q A;  4GTW A;  1ZEB A;  3UN5 A;  4ZGA A;  3M8W A;  2W5X A;  1P49 A;  4LRE A;  2QZU A;  2VQR A;  4GTZ A;  5EGE A;  1ZED A;  2IUC A;  3TWZ A;  1E2S P;  3DYC A;  1ZEF A;  5DLT A;  2ZKT A;  4LRD A;  1EJJ A;  3IDD A;  4UOP A;  3BDG B;  3UO0 A;  2W5S A;  5LRM A;  4YR1 A;  5GRR A;  1ELX A;  3NKQ A;  4KJG A;  4FDJ A; 
#chains in the Genus database with same CATH homology
 2D1G A;  5LIA A;  2W5V A;  3TG0 A;  1B8J A;  4LRF A;  3BDF A;  5IJQ A;  1KHL A;  3WAX A;  3WBH A;  3MK1 A;  5HRT A;  2ANH A;  3NKR A;  5IJS A;  4LR8 A;  2GA3 A;  3IGZ B;  5GOV A;  4LR7 A;  3NKP A;  1Y7A A;  1EW8 A;  3NVL A;  2RH6 A;  4MHX A;  2GSO A;  3WAY A;  4CYS A;  4ZG7 A;  2GSU A;  4LQY A;  4NWX A;  1SHQ A;  5EGH A;  4CXU A;  3T00 A;  4LR9 A;  1HJK A;  1EQJ A;  4FDI A;  3ED4 A;  1HQA A;  1URB A;  4LRB A;  2W5W A;  1ELZ A;  4TN0 A;  3CMR A;  4MY4 A;  3WAW A;  2W5R A;  4N7T A;  1KH5 A;  1AJA A;  2W5T A;  1AJC A;  3E2D A;  5KXA A;  5L0E A;  3TX0 A;  3UN3 A;  4ZG6 A;  3M8Y A;  1K7H A;  4UPL A;  3DPC A;  1KHJ A;  3SZY A;  3SZZ A;  2G9Y A;  4LRC A;  1SHN A;  3A52 A;  4ZG9 A;  4MIV A;  3B5Q A;  3OT9 A;  3UN2 A;  2IFY A;  5L0K A;  4GTY A;  2IUC B;  1AJB A;  3NKO A;  5TJ3 A;  1ELY A;  5DLV A;  5LRN A;  5K4P A;  1ED9 A;  3MK2 A;  3UNY A;  4GTX A;  1EI6 A;  3LXQ A;  1EW9 A;  3BDG A;  1ALJ A;  4LRA A;  2GLQ A;  1KHK A;  4CXS A;  5INH A;  4KM4 A;  1E33 P;  2XRG A;  1HDH A;  3BDH A;  4UPH A;  1FSU A;  1N2L A;  3IGY B;  2W8S A;  3NKN A;  5L0B A;  4UPK A;  3M8Z A;  1AJD A;  3NKM A;  3MK0 A;  3KD8 A;  4QAX A;  2W8D A;  4UOR A;  5C66 A;  1ANI A;  1KH9 A;  3T02 A;  3T01 A;  1KHN A;  2GSN A;  4KJD A;  4KAV A;  5AJ9 A;  1ED8 A;  1ANJ A;  1URA A;  4LR2 A;  2X98 A;  1ALK A;  1O99 A;  5DLW A;  1ALH A;  1Y6V A;  2W5Q A;  1O98 A;  4KAY A;  1E1Z P;  4UPI A;  4B56 A;  1N2K A;  1ALI A;  3WAV A;  4CYR A;  1E3C P;  1EW2 A;  1KH7 A;  1KH4 A;  4CXK A;  4UOO A;  3M7V A;  1AUK A;  5LQQ A;  2XR9 A;  4NWJ A;  3Q3Q A;  4GTW A;  1ZEB A;  3UN5 A;  4ZGA A;  3M8W A;  2W5X A;  1P49 A;  4LRE A;  2QZU A;  2VQR A;  4GTZ A;  5EGE A;  1ZED A;  2IUC A;  3TWZ A;  1E2S P;  3DYC A;  1ZEF A;  5DLT A;  2ZKT A;  4LRD A;  1EJJ A;  3IDD A;  4UOP A;  3BDG B;  3UO0 A;  2W5S A;  5LRM A;  4YR1 A;  5GRR A;  1ELX A;  3NKQ A;  4KJG A;  4FDJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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