4UPLA

Dimeric sulfatase spas2 from silicibacter pomeroyi
Total Genus 201
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
201
sequence length
555
structure length
555
Chain Sequence
TAVMNILFIMFDQLRWDYLSCYGHKTLNTPHIDRLAAKGVRFDRAYIQSPICGSSRMSTYTGRYVHSHGASWNGIPLKVGEMTMGDHLRAAGMGCWLVGKTHMRADEEGMARLGLEPDSLIGARVAECGFDVFERDDGMLPEGPDGYYDPDGAKEYNKFLRAKGYESDNPWHDFANSGLDDEGNVQSGWFLKNATRPANIAEEDSETPYLTSRAMEFIEQQTGPWCCHLSYIKPHWPYIVPEPYASMFGPEHVQDVVRSDSERQNAHPLFKAFMDTKVGEAFSRQEVRDAVIPAYMGLIKQADDQMGRLFKWLEDTGRMQDTMIVLTSDHGDFLGDHWMGEKTFFHDASTRVPLIIYDPRPEADATRGSVCDALVESIDLAPTFVEAAGGKPAMHILEGESLIPILHGARDHTLRDHVICEYDFSASPIAHLNDISVRQAVMFMVADKNWKLIHFEADPRPMLFDLKNDPQELVDLGGDPAHADVIAGMYDKLFRWTRRQSQRTTRSEEQLIAMRTKSRKRGIVLGIYDENETPLELTVKYRDRKARPYKDYLKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Ruegeria pomeroyi
publication title Balancing Specificity and Promiscuity in Enzyme Evolution: Multidimensional Activity Transitions in the Alkaline Phosphatase Superfamily.
pubmed doi rcsb
molecule keywords SULFATASE FAMILY PROTEIN
total genus 201
structure length 555
sequence length 555
chains with identical sequence C
ec nomenclature
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00884 Sulfatase Sulfatase
A PF16347 DUF4976 Domain of unknown function (DUF4976)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 4uplA01
5LRMA 1KH9A 3NKQA 1ALKA 2X98A 4LRAA 4UPHA 4ZG9A 4ZGAA 1KH4A 5AJ9A 4UPLA 1EI6A 1KHLA 2XRGA 3IGYB 4CXUA 4UOOA 1P49A 2ZKTA 5L0EA 5GRRA 3A52A 4LR9A 3WAYA 4QAXA 3IGZB 4ZG6A 5EGEA 4LR8A 2ANHA 3BDFA 1ANJA 3TWZA 4GTXA 4UORA 2W8SA 5DLWA 5C66A 4KAVA 1E33P 4B56A 3WAXA 3T02A 1AJDA 2W5SA 3KD8A 4UPIA 5GOVA 1ZEBA 4MIVA 1ANIA 1HJKA 5LIAA 4LR2A 5INHA 3T01A 4ZG7A 1HQAA 2W5WA 3SZZA 1K7HA 1N2LA 1KH5A 2VQRA 3M8ZA 1EW8A 4KJGA 3LXQA 2W8DA 1SHNA 1EQJA 4GTWA 4NWJA 1KHKA 1E1ZP 2W5TA 3NKPA 3DPCA 1O98A 2W5RA 1FSUA 2QZUA 1URBA 1ELYA 2RH6A 4FDIA 1AJCA 4LRCA 1ALHA 4LRDA 2GLQA 3ED4A 4MY4A 4FDJA 3Q3QA 5L0KA 1ED8A 4KJDA 4LQYA 2G9YA 1E2SP 1ED9A 2GSNA 3BDHA 1AJBA 3M8WA 4YR1A 2XR9A 2GA3A 1E3CP 4CYRA 4GTYA 2IUCB 3B5QA 4CYSA 1ALIA 3UN3A 3M7VA 5LRNA 4CXSA 2IUCA 1AJAA 4GTZA 1B8JA 2W5XA 4LRBA 3CMRA 3IDDA 5DLTA 3UNYA 1ELZA 5K4PA 3M8YA 5LQQA 2W5VA 4UOPA 5DLVA 3NKRA 3BDGB 4TN0A 4MHXA 3MK1A 1EW2A 1ELXA 1ALJA 5HRTA 1URAA 3NKOA 1KHNA 1Y6VA 1KHJA 5EGHA 3NKMA 3BDGA 5L0BA 3NKNA 4N7TA 5IJSA 3E2DA 4KAYA 3NVLA 3MK2A 3DYCA 2W5QA 1HDHA 3MK0A 3TX0A 5IJQA 3WAVA 1N2KA 1KH7A 4LREA 5TJ3A 2GSUA 1EW9A 3WAWA 1ZEDA 1Y7AA 4LR7A 4LRFA 4CXKA 3OT9A 3WBHA 1O99A 3T00A 2GSOA 5KXAA 1SHQA 4KM4A 2IFYA 3UO0A 2D1GA 4UPKA 3TG0A 3UN2A 1ZEFA 1EJJA 4NWXA 3SZYA 3UN5A 1AUKA
chains in the Genus database with same CATH superfamily
5LRMA 1KH9A 3NKQA 1ALKA 2X98A 4LRAA 4UPHA 4ZG9A 4ZGAA 1KH4A 5AJ9A 4UPLA 1EI6A 1KHLA 2XRGA 3IGYB 4CXUA 4UOOA 1P49A 2ZKTA 5L0EA 5GRRA 3A52A 4LR9A 3WAYA 4QAXA 3IGZB 4ZG6A 5EGEA 4LR8A 2ANHA 3BDFA 1ANJA 3TWZA 4GTXA 4UORA 2W8SA 5DLWA 5C66A 4KAVA 1E33P 4B56A 3WAXA 3T02A 1AJDA 2W5SA 3KD8A 4UPIA 5GOVA 1ZEBA 4MIVA 1ANIA 1HJKA 5LIAA 4LR2A 5INHA 3T01A 4ZG7A 1HQAA 2W5WA 3SZZA 1K7HA 1N2LA 1KH5A 2VQRA 3M8ZA 1EW8A 4KJGA 3LXQA 2W8DA 1SHNA 1EQJA 4GTWA 4NWJA 1KHKA 1E1ZP 2W5TA 3NKPA 3DPCA 1O98A 2W5RA 1FSUA 2QZUA 1URBA 1ELYA 2RH6A 4FDIA 1AJCA 4LRCA 1ALHA 4LRDA 2GLQA 3ED4A 4MY4A 4FDJA 3Q3QA 5L0KA 1ED8A 4KJDA 4LQYA 2G9YA 1E2SP 1ED9A 2GSNA 3BDHA 1AJBA 3M8WA 4YR1A 2XR9A 2GA3A 1E3CP 4CYRA 4GTYA 2IUCB 3B5QA 4CYSA 1ALIA 3UN3A 3M7VA 5LRNA 4CXSA 2IUCA 1AJAA 4GTZA 1B8JA 2W5XA 4LRBA 3CMRA 3IDDA 5DLTA 3UNYA 1ELZA 5K4PA 3M8YA 5LQQA 2W5VA 4UOPA 5DLVA 3NKRA 3BDGB 4TN0A 4MHXA 3MK1A 1EW2A 1ELXA 1ALJA 5HRTA 1URAA 3NKOA 1KHNA 1Y6VA 1KHJA 5EGHA 3NKMA 3BDGA 5L0BA 3NKNA 4N7TA 5IJSA 3E2DA 4KAYA 3NVLA 3MK2A 3DYCA 2W5QA 1HDHA 3MK0A 3TX0A 5IJQA 3WAVA 1N2KA 1KH7A 4LREA 5TJ3A 2GSUA 1EW9A 3WAWA 1ZEDA 1Y7AA 4LR7A 4LRFA 4CXKA 3OT9A 3WBHA 1O99A 3T00A 2GSOA 5KXAA 1SHQA 4KM4A 2IFYA 3UO0A 2D1GA 4UPKA 3TG0A 3UN2A 1ZEFA 1EJJA 4NWXA 3SZYA 3UN5A 1AUKA
chains in the Genus database with same CATH topology
5LRMA 1KH9A 3NKQA 1ALKA 2X98A 4LRAA 4UPHA 4ZG9A 4ZGAA 1KH4A 5AJ9A 4UPLA 1EI6A 1KHLA 2XRGA 3IGYB 4CXUA 4UOOA 1P49A 2ZKTA 5L0EA 5GRRA 3A52A 4LR9A 3WAYA 4QAXA 3IGZB 4ZG6A 5EGEA 4LR8A 2ANHA 3BDFA 1ANJA 3TWZA 4GTXA 4UORA 2W8SA 5DLWA 5C66A 4KAVA 1E33P 4B56A 3WAXA 3T02A 1AJDA 2W5SA 3KD8A 4UPIA 5GOVA 1ZEBA 4MIVA 1ANIA 1HJKA 5LIAA 4LR2A 5INHA 3T01A 4ZG7A 1HQAA 2W5WA 3SZZA 1K7HA 1N2LA 1KH5A 2VQRA 3M8ZA 1EW8A 4KJGA 3LXQA 2W8DA 1SHNA 1EQJA 4GTWA 4NWJA 1KHKA 1E1ZP 2W5TA 3NKPA 3DPCA 1O98A 2W5RA 1FSUA 2QZUA 1URBA 1ELYA 2RH6A 4FDIA 1AJCA 4LRCA 1ALHA 4LRDA 2GLQA 3ED4A 4MY4A 4FDJA 3Q3QA 5L0KA 1ED8A 4KJDA 4LQYA 2G9YA 1E2SP 1ED9A 2GSNA 3BDHA 1AJBA 3M8WA 4YR1A 2XR9A 2GA3A 1E3CP 4CYRA 4GTYA 2IUCB 3B5QA 4CYSA 1ALIA 3UN3A 3M7VA 5LRNA 4CXSA 2IUCA 1AJAA 4GTZA 1B8JA 2W5XA 4LRBA 3CMRA 3IDDA 5DLTA 3UNYA 1ELZA 5K4PA 3M8YA 5LQQA 2W5VA 4UOPA 5DLVA 3NKRA 3BDGB 4TN0A 4MHXA 3MK1A 1EW2A 1ELXA 1ALJA 5HRTA 1URAA 3NKOA 1KHNA 1Y6VA 1KHJA 5EGHA 3NKMA 3BDGA 5L0BA 3NKNA 4N7TA 5IJSA 3E2DA 4KAYA 3NVLA 3MK2A 3DYCA 2W5QA 1HDHA 3MK0A 3TX0A 5IJQA 3WAVA 1N2KA 1KH7A 4LREA 5TJ3A 2GSUA 1EW9A 3WAWA 1ZEDA 1Y7AA 4LR7A 4LRFA 4CXKA 3OT9A 3WBHA 1O99A 3T00A 2GSOA 5KXAA 1SHQA 4KM4A 2IFYA 3UO0A 2D1GA 4UPKA 3TG0A 3UN2A 1ZEFA 1EJJA 4NWXA 3SZYA 3UN5A 1AUKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5LRM A;  1KH9 A;  3NKQ A;  1ALK A;  2X98 A;  4LRA A;  4UPH A;  4ZG9 A;  4ZGA A;  1KH4 A;  5AJ9 A;  4UPL A;  1EI6 A;  1KHL A;  2XRG A;  3IGY B;  4CXU A;  4UOO A;  1P49 A;  2ZKT A;  5L0E A;  5GRR A;  3A52 A;  4LR9 A;  3WAY A;  4QAX A;  3IGZ B;  4ZG6 A;  5EGE A;  4LR8 A;  2ANH A;  3BDF A;  1ANJ A;  3TWZ A;  4GTX A;  4UOR A;  2W8S A;  5DLW A;  5C66 A;  4KAV A;  1E33 P;  4B56 A;  3WAX A;  3T02 A;  1AJD A;  2W5S A;  3KD8 A;  4UPI A;  5GOV A;  1ZEB A;  4MIV A;  1ANI A;  1HJK A;  5LIA A;  4LR2 A;  5INH A;  3T01 A;  4ZG7 A;  1HQA A;  2W5W A;  3SZZ A;  1K7H A;  1N2L A;  1KH5 A;  2VQR A;  3M8Z A;  1EW8 A;  4KJG A;  3LXQ A;  2W8D A;  1SHN A;  1EQJ A;  4GTW A;  4NWJ A;  1KHK A;  1E1Z P;  2W5T A;  3NKP A;  3DPC A;  1O98 A;  2W5R A;  1FSU A;  2QZU A;  1URB A;  1ELY A;  2RH6 A;  4FDI A;  1AJC A;  4LRC A;  1ALH A;  4LRD A;  2GLQ A;  3ED4 A;  4MY4 A;  4FDJ A;  3Q3Q A;  5L0K A;  1ED8 A;  4KJD A;  4LQY A;  2G9Y A;  1E2S P;  1ED9 A;  2GSN A;  3BDH A;  1AJB A;  3M8W A;  4YR1 A;  2XR9 A;  2GA3 A;  1E3C P;  4CYR A;  4GTY A;  2IUC B;  3B5Q A;  4CYS A;  1ALI A;  3UN3 A;  3M7V A;  5LRN A;  4CXS A;  2IUC A;  1AJA A;  4GTZ A;  1B8J A;  2W5X A;  4LRB A;  3CMR A;  3IDD A;  5DLT A;  3UNY A;  1ELZ A;  5K4P A;  3M8Y A;  5LQQ A;  2W5V A;  4UOP A;  5DLV A;  3NKR A;  3BDG B;  4TN0 A;  4MHX A;  3MK1 A;  1EW2 A;  1ELX A;  1ALJ A;  5HRT A;  1URA A;  3NKO A;  1KHN A;  1Y6V A;  1KHJ A;  5EGH A;  3NKM A;  3BDG A;  5L0B A;  3NKN A;  4N7T A;  5IJS A;  3E2D A;  4KAY A;  3NVL A;  3MK2 A;  3DYC A;  2W5Q A;  1HDH A;  3MK0 A;  3TX0 A;  5IJQ A;  3WAV A;  1N2K A;  1KH7 A;  4LRE A;  5TJ3 A;  2GSU A;  1EW9 A;  3WAW A;  1ZED A;  1Y7A A;  4LR7 A;  4LRF A;  4CXK A;  3OT9 A;  3WBH A;  1O99 A;  3T00 A;  2GSO A;  5KXA A;  1SHQ A;  4KM4 A;  2IFY A;  3UO0 A;  2D1G A;  4UPK A;  3TG0 A;  3UN2 A;  1ZEF A;  1EJJ A;  4NWX A;  3SZY A;  3UN5 A;  1AUK A; 
#chains in the Genus database with same CATH topology
 5LRM A;  1KH9 A;  3NKQ A;  1ALK A;  2X98 A;  4LRA A;  4UPH A;  4ZG9 A;  4ZGA A;  1KH4 A;  5AJ9 A;  4UPL A;  1EI6 A;  1KHL A;  2XRG A;  3IGY B;  4CXU A;  4UOO A;  1P49 A;  2ZKT A;  5L0E A;  5GRR A;  3A52 A;  4LR9 A;  3WAY A;  4QAX A;  3IGZ B;  4ZG6 A;  5EGE A;  4LR8 A;  2ANH A;  3BDF A;  1ANJ A;  3TWZ A;  4GTX A;  4UOR A;  2W8S A;  5DLW A;  5C66 A;  4KAV A;  1E33 P;  4B56 A;  3WAX A;  3T02 A;  1AJD A;  2W5S A;  3KD8 A;  4UPI A;  5GOV A;  1ZEB A;  4MIV A;  1ANI A;  1HJK A;  5LIA A;  4LR2 A;  5INH A;  3T01 A;  4ZG7 A;  1HQA A;  2W5W A;  3SZZ A;  1K7H A;  1N2L A;  1KH5 A;  2VQR A;  3M8Z A;  1EW8 A;  4KJG A;  3LXQ A;  2W8D A;  1SHN A;  1EQJ A;  4GTW A;  4NWJ A;  1KHK A;  1E1Z P;  2W5T A;  3NKP A;  3DPC A;  1O98 A;  2W5R A;  1FSU A;  2QZU A;  1URB A;  1ELY A;  2RH6 A;  4FDI A;  1AJC A;  4LRC A;  1ALH A;  4LRD A;  2GLQ A;  3ED4 A;  4MY4 A;  4FDJ A;  3Q3Q A;  5L0K A;  1ED8 A;  4KJD A;  4LQY A;  2G9Y A;  1E2S P;  1ED9 A;  2GSN A;  3BDH A;  1AJB A;  3M8W A;  4YR1 A;  2XR9 A;  2GA3 A;  1E3C P;  4CYR A;  4GTY A;  2IUC B;  3B5Q A;  4CYS A;  1ALI A;  3UN3 A;  3M7V A;  5LRN A;  4CXS A;  2IUC A;  1AJA A;  4GTZ A;  1B8J A;  2W5X A;  4LRB A;  3CMR A;  3IDD A;  5DLT A;  3UNY A;  1ELZ A;  5K4P A;  3M8Y A;  5LQQ A;  2W5V A;  4UOP A;  5DLV A;  3NKR A;  3BDG B;  4TN0 A;  4MHX A;  3MK1 A;  1EW2 A;  1ELX A;  1ALJ A;  5HRT A;  1URA A;  3NKO A;  1KHN A;  1Y6V A;  1KHJ A;  5EGH A;  3NKM A;  3BDG A;  5L0B A;  3NKN A;  4N7T A;  5IJS A;  3E2D A;  4KAY A;  3NVL A;  3MK2 A;  3DYC A;  2W5Q A;  1HDH A;  3MK0 A;  3TX0 A;  5IJQ A;  3WAV A;  1N2K A;  1KH7 A;  4LRE A;  5TJ3 A;  2GSU A;  1EW9 A;  3WAW A;  1ZED A;  1Y7A A;  4LR7 A;  4LRF A;  4CXK A;  3OT9 A;  3WBH A;  1O99 A;  3T00 A;  2GSO A;  5KXA A;  1SHQ A;  4KM4 A;  2IFY A;  3UO0 A;  2D1G A;  4UPK A;  3TG0 A;  3UN2 A;  1ZEF A;  1EJJ A;  4NWX A;  3SZY A;  3UN5 A;  1AUK A; 
#chains in the Genus database with same CATH homology
 5LRM A;  1KH9 A;  3NKQ A;  1ALK A;  2X98 A;  4LRA A;  4UPH A;  4ZG9 A;  4ZGA A;  1KH4 A;  5AJ9 A;  4UPL A;  1EI6 A;  1KHL A;  2XRG A;  3IGY B;  4CXU A;  4UOO A;  1P49 A;  2ZKT A;  5L0E A;  5GRR A;  3A52 A;  4LR9 A;  3WAY A;  4QAX A;  3IGZ B;  4ZG6 A;  5EGE A;  4LR8 A;  2ANH A;  3BDF A;  1ANJ A;  3TWZ A;  4GTX A;  4UOR A;  2W8S A;  5DLW A;  5C66 A;  4KAV A;  1E33 P;  4B56 A;  3WAX A;  3T02 A;  1AJD A;  2W5S A;  3KD8 A;  4UPI A;  5GOV A;  1ZEB A;  4MIV A;  1ANI A;  1HJK A;  5LIA A;  4LR2 A;  5INH A;  3T01 A;  4ZG7 A;  1HQA A;  2W5W A;  3SZZ A;  1K7H A;  1N2L A;  1KH5 A;  2VQR A;  3M8Z A;  1EW8 A;  4KJG A;  3LXQ A;  2W8D A;  1SHN A;  1EQJ A;  4GTW A;  4NWJ A;  1KHK A;  1E1Z P;  2W5T A;  3NKP A;  3DPC A;  1O98 A;  2W5R A;  1FSU A;  2QZU A;  1URB A;  1ELY A;  2RH6 A;  4FDI A;  1AJC A;  4LRC A;  1ALH A;  4LRD A;  2GLQ A;  3ED4 A;  4MY4 A;  4FDJ A;  3Q3Q A;  5L0K A;  1ED8 A;  4KJD A;  4LQY A;  2G9Y A;  1E2S P;  1ED9 A;  2GSN A;  3BDH A;  1AJB A;  3M8W A;  4YR1 A;  2XR9 A;  2GA3 A;  1E3C P;  4CYR A;  4GTY A;  2IUC B;  3B5Q A;  4CYS A;  1ALI A;  3UN3 A;  3M7V A;  5LRN A;  4CXS A;  2IUC A;  1AJA A;  4GTZ A;  1B8J A;  2W5X A;  4LRB A;  3CMR A;  3IDD A;  5DLT A;  3UNY A;  1ELZ A;  5K4P A;  3M8Y A;  5LQQ A;  2W5V A;  4UOP A;  5DLV A;  3NKR A;  3BDG B;  4TN0 A;  4MHX A;  3MK1 A;  1EW2 A;  1ELX A;  1ALJ A;  5HRT A;  1URA A;  3NKO A;  1KHN A;  1Y6V A;  1KHJ A;  5EGH A;  3NKM A;  3BDG A;  5L0B A;  3NKN A;  4N7T A;  5IJS A;  3E2D A;  4KAY A;  3NVL A;  3MK2 A;  3DYC A;  2W5Q A;  1HDH A;  3MK0 A;  3TX0 A;  5IJQ A;  3WAV A;  1N2K A;  1KH7 A;  4LRE A;  5TJ3 A;  2GSU A;  1EW9 A;  3WAW A;  1ZED A;  1Y7A A;  4LR7 A;  4LRF A;  4CXK A;  3OT9 A;  3WBH A;  1O99 A;  3T00 A;  2GSO A;  5KXA A;  1SHQ A;  4KM4 A;  2IFY A;  3UO0 A;  2D1G A;  4UPK A;  3TG0 A;  3UN2 A;  1ZEF A;  1EJJ A;  4NWX A;  3SZY A;  3UN5 A;  1AUK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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