The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
34
|
sequence length |
91
|
structure length |
87
|
Chain Sequence |
QERPSETIDRERMRLVETLQADSGLLLDALLARGVLTGPEYEALDALPDAERRVRRLLLLVQGKGEAACQELLRCAQRTAGAWDWQH
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Apoptosis
|
| molecule keywords |
NUCLEOLAR PROTEIN 3
|
| publication title |
Crystal Structure of Caspase Recruiting Domain (Card) of Apoptosis Repressor with Card (Arc) and its Implication in Inhibition of Apoptosis.
pubmed doi rcsb |
| source organism |
Homo sapiens
|
| total genus |
34
|
| structure length |
87
|
| sequence length |
91
|
| chains with identical sequence |
B
|
| ec nomenclature | |
| pdb deposition date | 2014-09-04 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | Death Domain, Fas | Death Domain, Fas |
#chains in the Genus database with same CATH superfamily 2GF5 A; 1Z6T A; 1YGO A; 4NQK A; 3MOP G; 4F44 A; 1E3Y A; 3CL3 A; 2LWE A; 1DGN A; 2N80 A; 4O9L A; 2A5Y B; 4O9F A; 3T6P A; 2VGQ A; 4F42 A; 2MN4 A; 1CWW A; 2LWD A; 4QOB A; 4E9M A; 3KAT A; 2LS7 A; 2M5V A; 4O7Q A; 2L6A A; 2N00 A; 4M9Z A; 2O71 A; 2KN6 A; 3QF2 A; 2NAQ A; 1D2Z B; 4A2W A; 2F1S A; 2MPC A; 1CY5 A; 1UCP A; 4M9X A; 1PN5 A; 2MS7 A; 1D2Z A; 2N97 A; 2NZ7 A; 2A9I A; 1E41 A; 3YGS P; 4P4H I; 2OF5 A; 1A1W A; 4A2Q A; 2P1H A; 2BBZ A; 2DBH A; 2IB1 A; 3LQQ A; 4M9S A; 4EWI A; 4P4H A; 2DO9 A; 1NGR A; 2B1W A; 2DBF A; 2N1F A; 4JQW A; 4UZ0 A; 4D8O A; 2NSN A; 2G7R A; 4DWN A; 1DDF A; 1WMG A; 2YGS A; 4IZ7 B; 2MB9 A; 4RHW A; 4O6X A; 1WXP A; 4FH0 A; 4N1J A; 4IZA B; 3EZQ B; 1ICH A; 3LQR A; 2D96 A; 4LWD A; 2BBR A; 4N1K A; 1C15 A; 3J6J A; 3J63 A; 1FAD A; 3EZQ A; 4RHW E; 2HM2 Q; 2L9M A; 4IZ5 E; 4ZBW A; 2DBD A; 2N83 A; 2OF5 H; 1N3K A; 1WH4 A; 2YU0 A; 4I16 A; 2MS8 A; 4JUP A; 2KM6 A; 3YGS C; 2N7Z A; 1A1Z A; 2YVI A; 3CRD A; 3MOP A; 3MOP K; 4N1L A; 2YQF A; 2DBG A; #chains in the Genus database with same CATH topology 2GF5 A; 1Z6T A; 1YGO A; 4NQK A; 3MOP G; 4F44 A; 1E3Y A; 3CL3 A; 2LWE A; 1DGN A; 2N80 A; 4O9L A; 2A5Y B; 4O9F A; 3T6P A; 2VGQ A; 4F42 A; 2MN4 A; 1CWW A; 2LWD A; 4QOB A; 4E9M A; 3KAT A; 2LS7 A; 2M5V A; 4O7Q A; 2L6A A; 2N00 A; 4M9Z A; 2O71 A; 2KN6 A; 3QF2 A; 2NAQ A; 1D2Z B; 4A2W A; 2F1S A; 2MPC A; 1CY5 A; 1UCP A; 4M9X A; 1PN5 A; 2MS7 A; 1D2Z A; 2N97 A; 2NZ7 A; 2A9I A; 1E41 A; 3YGS P; 4P4H I; 2OF5 A; 1A1W A; 4A2Q A; 2XV9 A; 2P1H A; 2BBZ A; 2DBH A; 2IB1 A; 3LQQ A; 4M9S A; 4EWI A; 4P4H A; 2DO9 A; 1NGR A; 2B1W A; 2MJM A; 2DBF A; 2N1F A; 4JQW A; 4UZ0 A; 4D8O A; 2NSN A; 2G7R A; 4DWN A; 1DDF A; 1WMG A; 2YGS A; 4IZ7 B; 2MB9 A; 4RHW A; 4O6X A; 1WXP A; 4FH0 A; 4N1J A; 4IZA B; 3EZQ B; 1ICH A; 3LQR A; 2D96 A; 4LWD A; 2BBR A; 4N1K A; 1C15 A; 3J6J A; 3J63 A; 1FAD A; 3EZQ A; 4RHW E; 2HM2 Q; 2L9M A; 4IZ5 E; 4ZBW A; 2DBD A; 2N83 A; 2OF5 H; 1N3K A; 1WH4 A; 2YU0 A; 4I16 A; 2MS8 A; 4JUP A; 2KM6 A; 3YGS C; 2N7Z A; 1A1Z A; 2YVI A; 3CRD A; 3MOP A; 3MOP K; 4N1L A; 2YQF A; 2DBG A; #chains in the Genus database with same CATH homology 2GF5 A; 1Z6T A; 1YGO A; 4NQK A; 3MOP G; 4F44 A; 1E3Y A; 3CL3 A; 2LWE A; 1DGN A; 2N80 A; 4O9L A; 2A5Y B; 4O9F A; 3T6P A; 2VGQ A; 4F42 A; 2MN4 A; 1CWW A; 2LWD A; 4QOB A; 4E9M A; 3KAT A; 2LS7 A; 2M5V A; 4O7Q A; 2L6A A; 2N00 A; 4M9Z A; 2O71 A; 2KN6 A; 3QF2 A; 2NAQ A; 1D2Z B; 4A2W A; 2F1S A; 2MPC A; 1CY5 A; 1UCP A; 4M9X A; 1PN5 A; 2MS7 A; 1D2Z A; 2N97 A; 2NZ7 A; 2A9I A; 1E41 A; 3YGS P; 4P4H I; 2OF5 A; 1A1W A; 4A2Q A; 2XV9 A; 2P1H A; 2BBZ A; 2DBH A; 2IB1 A; 3LQQ A; 4M9S A; 4EWI A; 4P4H A; 2DO9 A; 1NGR A; 2B1W A; 2MJM A; 2DBF A; 2N1F A; 4JQW A; 4UZ0 A; 4D8O A; 2NSN A; 2G7R A; 4DWN A; 1DDF A; 1WMG A; 2YGS A; 4IZ7 B; 2MB9 A; 4RHW A; 4O6X A; 1WXP A; 4FH0 A; 4N1J A; 4IZA B; 3EZQ B; 1ICH A; 3LQR A; 2D96 A; 4LWD A; 2BBR A; 4N1K A; 1C15 A; 3J6J A; 3J63 A; 1FAD A; 3EZQ A; 4RHW E; 2HM2 Q; 2L9M A; 4IZ5 E; 4ZBW A; 2DBD A; 2N83 A; 2OF5 H; 1N3K A; 1WH4 A; 2YU0 A; 4I16 A; 2MS8 A; 4JUP A; 2KM6 A; 3YGS C; 2N7Z A; 1A1Z A; 2YVI A; 3CRD A; 3MOP A; 3MOP K; 4N1L A; 2YQF A; 2DBG A;
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