4WH7A

Structure of the cdc25b phosphatase catalytic domain with bound ligand
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
178
structure length
178
Chain Sequence
DHRELIGDYSKAFLLQTVDGKHQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKSPIAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQDYRPMNHEAFKDELKTFRLKTRSWA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase/hydrolase inhibitor
molecule keywords M-phase inducer phosphatase 2
publication title Inhibition of CDC25B Phosphatase Through Disruption of Protein-Protein Interaction.
pubmed doi rcsb
source organism Homo sapiens
total genus 63
structure length 178
sequence length 178
ec nomenclature ec 3.1.3.48: Protein-tyrosine-phosphatase.
pdb deposition date 2014-09-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 4wh7A00
1DP2A 2JTSA 2WLRA 1WV9A 3OP3A 1CWTA 5HBPA 1YT8A 2FSXA 3O3WA 2MOIA 2K0ZA 3IPOA 5LAOA 1VEEA 3FNJA 2OUCA 1GN0A 4OCGA 2EG4B 2MOLA 3FS5A 3GK5A 2VSWA 3FLHA 3D1PA 3HWIA 1ORBA 3FOJA 1WHBA 2A2KA 1CWRA 1E0CA 1QXNA 5HBLA 2GWFA 2MRMA 1H4MX 3NTAA 4WH9A 2EG4A 1RHSA 3ICSA 2JTQA 3IPPA 3NT6A 3F4AA 5HBQA 2HHGA 3NTDA 1YMDA 2IFDA 1RHDA 1URHA 2UZQA 3HIXA 1BOIA 1GMXA 3I2VA 1CWSA 2EG3A 1TQ1A 3K9RA 3AAYA 2KL3A 3ICRA 5LAMA 4WH7A 2DCQA 1H4KX 1YS0A 1HZMA 3HZUA 2WLXA 2IFVA 3G5JA 1T3KA 3NHVA 3IWHA 3P3AA 1YM9A 1BOHA 1YMKA 4F67A 3TP9A 1OKGA 3I3UA 4JGTA 5HBOA 5HPAA 2J6PA 3AAXA 2JTRA 3TG3A 1YMLA 1UARA 3ILMA 3OLHA 3R2UA 3MZZA 3UTNX 3TG1B 1C25A 2ORAA 3ICTA 1QB0A
chains in the Genus database with same CATH superfamily
1DP2A 2JTSA 2WLRA 1WV9A 3OP3A 1CWTA 5HBPA 1YT8A 2FSXA 3O3WA 2MOIA 2K0ZA 3IPOA 5LAOA 1VEEA 3FNJA 2OUCA 1GN0A 4OCGA 2EG4B 2MOLA 3FS5A 3GK5A 2VSWA 3FLHA 3D1PA 3HWIA 1ORBA 3FOJA 1WHBA 2A2KA 1CWRA 1E0CA 1QXNA 5HBLA 2GWFA 2MRMA 1H4MX 3NTAA 4WH9A 2EG4A 1RHSA 3ICSA 2JTQA 3IPPA 3NT6A 3F4AA 5HBQA 2HHGA 3NTDA 1YMDA 2IFDA 1RHDA 1URHA 2UZQA 3HIXA 1BOIA 1GMXA 3I2VA 1CWSA 2EG3A 1TQ1A 3K9RA 3AAYA 2KL3A 3ICRA 5LAMA 4WH7A 2DCQA 1H4KX 1YS0A 1HZMA 3HZUA 2WLXA 2IFVA 3G5JA 1T3KA 3NHVA 2Q82A 3IWHA 3P3AA 1YM9A 1BOHA 1YMKA 4F67A 3TP9A 1OKGA 3I3UA 4JGTA 5HBOA 5HPAA 2J6PA 3AAXA 2JTRA 3TG3A 1YMLA 1UARA 3ILMA 3OLHA 3R2UA 3MZZA 3UTNX 3TG1B 1C25A 2ORAA 3ICTA 1QB0A
chains in the Genus database with same CATH topology
1DP2A 2JTSA 2WLRA 1WV9A 3OP3A 1CWTA 5HBPA 1YT8A 2FSXA 3O3WA 2MOIA 2K0ZA 3IPOA 5LAOA 1VEEA 3FNJA 2OUCA 1GN0A 4OCGA 2EG4B 2MOLA 3FS5A 3GK5A 2VSWA 3FLHA 3D1PA 3HWIA 1ORBA 3FOJA 1WHBA 2A2KA 1CWRA 1E0CA 1QXNA 5HBLA 2GWFA 2MRMA 1H4MX 3NTAA 4WH9A 2EG4A 1RHSA 3ICSA 2JTQA 3IPPA 3NT6A 3F4AA 5HBQA 2HHGA 3NTDA 1YMDA 2IFDA 1RHDA 1URHA 2UZQA 3HIXA 1BOIA 1GMXA 3I2VA 1CWSA 2EG3A 1TQ1A 3K9RA 3AAYA 2KL3A 3ICRA 5LAMA 4WH7A 2DCQA 1H4KX 1YS0A 1HZMA 3HZUA 2WLXA 2IFVA 3G5JA 1T3KA 3NHVA 3IWHA 3P3AA 1YM9A 1BOHA 1YMKA 4F67A 3TP9A 1OKGA 3I3UA 4JGTA 5HBOA 5HPAA 2J6PA 3AAXA 2JTRA 3TG3A 1YMLA 1UARA 3ILMA 3OLHA 3R2UA 3MZZA 3UTNX 3TG1B 1C25A 2ORAA 3ICTA 1QB0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DP2 A;  2JTS A;  2WLR A;  1WV9 A;  3OP3 A;  1CWT A;  5HBP A;  1YT8 A;  2FSX A;  3O3W A;  2MOI A;  2K0Z A;  3IPO A;  5LAO A;  1VEE A;  3FNJ A;  2OUC A;  1GN0 A;  4OCG A;  2EG4 B;  2MOL A;  3FS5 A;  3GK5 A;  2VSW A;  3FLH A;  3D1P A;  3HWI A;  1ORB A;  3FOJ A;  1WHB A;  2A2K A;  1CWR A;  1E0C A;  1QXN A;  5HBL A;  2GWF A;  2MRM A;  1H4M X;  3NTA A;  4WH9 A;  2EG4 A;  1RHS A;  3ICS A;  2JTQ A;  3IPP A;  3NT6 A;  3F4A A;  5HBQ A;  2HHG A;  3NTD A;  1YMD A;  2IFD A;  1RHD A;  1URH A;  2UZQ A;  3HIX A;  1BOI A;  1GMX A;  3I2V A;  1CWS A;  2EG3 A;  1TQ1 A;  3K9R A;  3AAY A;  2KL3 A;  3ICR A;  5LAM A;  4WH7 A;  2DCQ A;  1H4K X;  1YS0 A;  1HZM A;  3HZU A;  2WLX A;  2IFV A;  3G5J A;  1T3K A;  3NHV A;  3IWH A;  3P3A A;  1YM9 A;  1BOH A;  1YMK A;  4F67 A;  3TP9 A;  1OKG A;  3I3U A;  4JGT A;  5HBO A;  5HPA A;  2J6P A;  3AAX A;  2JTR A;  3TG3 A;  1YML A;  1UAR A;  3ILM A;  3OLH A;  3R2U A;  3MZZ A;  3UTN X;  3TG1 B;  1C25 A;  2ORA A;  3ICT A;  1QB0 A; 
#chains in the Genus database with same CATH topology
 1DP2 A;  2JTS A;  2WLR A;  1WV9 A;  3OP3 A;  1CWT A;  5HBP A;  1YT8 A;  2FSX A;  3O3W A;  2MOI A;  2K0Z A;  3IPO A;  5LAO A;  1VEE A;  3FNJ A;  2OUC A;  1GN0 A;  4OCG A;  2EG4 B;  2MOL A;  3FS5 A;  3GK5 A;  2VSW A;  3FLH A;  3D1P A;  3HWI A;  1ORB A;  3FOJ A;  1WHB A;  2A2K A;  1CWR A;  1E0C A;  1QXN A;  5HBL A;  2GWF A;  2MRM A;  1H4M X;  3NTA A;  4WH9 A;  2EG4 A;  1RHS A;  3ICS A;  2JTQ A;  3IPP A;  3NT6 A;  3F4A A;  5HBQ A;  2HHG A;  3NTD A;  1YMD A;  2IFD A;  1RHD A;  1URH A;  2UZQ A;  3HIX A;  1BOI A;  1GMX A;  3I2V A;  1CWS A;  2EG3 A;  1TQ1 A;  3K9R A;  3AAY A;  2KL3 A;  3ICR A;  5LAM A;  4WH7 A;  2DCQ A;  1H4K X;  1YS0 A;  1HZM A;  3HZU A;  2WLX A;  2IFV A;  3G5J A;  1T3K A;  3NHV A;  2Q82 A;  3IWH A;  3P3A A;  1YM9 A;  1BOH A;  1YMK A;  4F67 A;  3TP9 A;  1OKG A;  3I3U A;  4JGT A;  5HBO A;  5HPA A;  2J6P A;  3AAX A;  2JTR A;  3TG3 A;  1YML A;  1UAR A;  3ILM A;  3OLH A;  3R2U A;  3MZZ A;  3UTN X;  3TG1 B;  1C25 A;  2ORA A;  3ICT A;  1QB0 A; 
#chains in the Genus database with same CATH homology
 1DP2 A;  2JTS A;  2WLR A;  1WV9 A;  3OP3 A;  1CWT A;  5HBP A;  1YT8 A;  2FSX A;  3O3W A;  2MOI A;  2K0Z A;  3IPO A;  5LAO A;  1VEE A;  3FNJ A;  2OUC A;  1GN0 A;  4OCG A;  2EG4 B;  2MOL A;  3FS5 A;  3GK5 A;  2VSW A;  3FLH A;  3D1P A;  3HWI A;  1ORB A;  3FOJ A;  1WHB A;  2A2K A;  1CWR A;  1E0C A;  1QXN A;  5HBL A;  2GWF A;  2MRM A;  1H4M X;  3NTA A;  4WH9 A;  2EG4 A;  1RHS A;  3ICS A;  2JTQ A;  3IPP A;  3NT6 A;  3F4A A;  5HBQ A;  2HHG A;  3NTD A;  1YMD A;  2IFD A;  1RHD A;  1URH A;  2UZQ A;  3HIX A;  1BOI A;  1GMX A;  3I2V A;  1CWS A;  2EG3 A;  1TQ1 A;  3K9R A;  3AAY A;  2KL3 A;  3ICR A;  5LAM A;  4WH7 A;  2DCQ A;  1H4K X;  1YS0 A;  1HZM A;  3HZU A;  2WLX A;  2IFV A;  3G5J A;  1T3K A;  3NHV A;  3IWH A;  3P3A A;  1YM9 A;  1BOH A;  1YMK A;  4F67 A;  3TP9 A;  1OKG A;  3I3U A;  4JGT A;  5HBO A;  5HPA A;  2J6P A;  3AAX A;  2JTR A;  3TG3 A;  1YML A;  1UAR A;  3ILM A;  3OLH A;  3R2U A;  3MZZ A;  3UTN X;  3TG1 B;  1C25 A;  2ORA A;  3ICT A;  1QB0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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