4WILA

Crystal structure of dcoh2 s51t
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
100
structure length
100
Chain Sequence
DAQWLTAEERDQLIPGLKAAGWSELSERDAIYKEFSFKNFNQAFGFMTRVALQAEKMNHHPEWFNVYNKVQITLTSHDCGGLTKRDVKLAQFIEKAAASL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords Pterin-4-alpha-carbinolamine dehydratase 2
publication title Interactions with the Bifunctional Interface of the Transcriptional Coactivator DCoH1 Are Kinetically Regulated.
pubmed doi rcsb
source organism Mus musculus
total genus 34
structure length 100
sequence length 100
chains with identical sequence B
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 2014-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 4wilA00
1DCHA 2V6TA 4WILA 4C45A 1F93A 1RU0A 1DCPA 3JSTA 2V6UA 3HXAA 2V6SA 4LOWA 1USOA 1DCOA 2EBBA 1USMA
chains in the Genus database with same CATH superfamily
1WCMK 1L0WA 3CQZC 3HKZL 3RZOK 3LAJA 3AQOA 3QX3A 4YFKA 4LOWA 3N0CA 4A3DK 1TWGK 1TWCC 3S15C 1WIHA 3S1NC 2A6HA 1RU0A 4FZBA 2A68A 2WB1D 3BP8C 5M5WK 4KMUA 5IORA 1I50K 1O29A 4RMFA 3H3VD 4A3LC 4BY1C 1XXCA 4PAAA 3AH5A 2VUMK 3N3YA 4GFQA 4XLPA 4OIOA 1XZPA 1Y1WK 1DCPA 1VH2A 3HOYK 1VGXA 4C3IC 2P8TA 1J98A 4Q4ZA 2V6TA 2Y3PA 1HQMA 2NVQC 2D6FC 1INNA 4X6AC 4A3CC 1EQRA 4KB4A 1WCMA 2Y0SD 5E68A 5EGHA 4QIWD 5IYBC 1BDFA 5D4DA 4A3IC 3GTPC 1USMA 3AD9C 1YNJA 3GTQK 3GTKA 4QJVA 2YU9C 1EI6A 1I6HC 3MMLB 4C3JC 4A3BK 1UV7A 2A6EA 3GTJK 1R9TC 4GTEA 3S14C 4C45A 3PO3C 1JOEA 2JA6C 1DCOA 3GTLC 1Y1VK 1TWFK 1ZYRA 2CFAB 3S1QC 4A3JK 3I4NK 4YFNA 3RZDC 1F9NA 4C3HK 3HOWK 2XCOA 5C4XK 4C2MC 4KMAA 1VJEA 2JA5C 4G7ZA 3M4OK 4P9SA 4A3GC 2JA8K 3S2HC 1SFOA 4A3MC 1IL2A 1O27A 2NVTK 4XSZA 5IOTA 5IYCK 3HOVK 3GEIA 3H0GC 2E2JK 4KM9A 2GSNA 3BP3A 4A93K 4A3KK 3G4AA 4BY7C 3IPJA 3S1RC 1IS1A 4Y52C 1BS2A 4GTAA 3HXAA 3LAPA 1WQHA 3TFIA 3S16C 3S0XA 4JK1A 2CW0A 1C0AA 4Y7NC 1K83A 2B63A 2R92C 4A3EK 3S2DK 2V6UA 3GTOA 1DCHA 3S1MC 4M1XA 1I3QC 1IQ0A 3RZOC 1ISEA 1J6XA 4YFXA 3GTPA 1TWAA 4G0VA 3NUHA 4A3FC 4A3DC 3L4JA 3I4MC 4BBRK 1HI9A 1F93A 3FKIK 5C44K 1J6VA 5HL8A 2R7ZA 1VLOA 1G51A 2E2IA 2RH6A 3GTKK 1USOA 3T02A 1WQGA 1GE9A 4OIRA 2JA7C 2WAQL 3AQPA 2O5IA 1SMYA 1XPPA 3SZYA 1I6VA 3S17C 3GEHA 4WILA 5FJ8K 5M3MK 5TMCA 4GTBA 3HOZC 2VUMC 2R93A 2XCQA 4P5AA 2CFAA 2GAGC 4FM9A 3HOYC 2NVXA 1XXBA 3LPXA 3S15K 3GTMC 3GEEA 3HKZD 1O2FB 5L46A 4GZYA 1ZQ1C 1SFOK 3OREA 3GTGC 4OIQA 4KAWX 2PMZL 3A8KA 3SZZA 2WAQD 3FOFA 4XLNA 1JQWA 3TFJA 4AH6A 3FKIA 2NVYC 3VA7A 2GSUA 4AYBL 1O28A 4C3IK 1TWHC 4A3BC 3K7AK 1YNNA 1ZBSA 2B63K 1K83K 3GTJC 2ZUFA 2NVQK 4X6AK 3G4CA 4LK1A 1PJ6A 3GTOK 3M3YK 2BE5A 2E2HA 3CAGA 4G7OA 3CQZA 5C4JK 5IYDC 2RGRA 5IYBK 2XCRB 3GTPK 4Q5SA 1TWAK 4XSXA 4BLAA 1TWCA 1XZQB 1O24A 1WOSA 5C4XC 3HOXK 4DDQA 3M4OC 2FQOA 4ILDA 2JA8C 2E2IK 2R7ZK 2JA7A 4KASA 5IP7K 1I6HK 4C3JK 2O5JA 5IP9K 1J6WA 3HOUK 1EH1A 1WSVA 4WJ4A 1YCLA 4BBSK 1KQ4A 4O2DA 3PO3K 5TMFA 1O25A 4LR2A 1PJ7A 4G0UA 2R93K 3GDZA 5C3EK 3A8JA 5FLMC 3TFHA 3GTMA 3ERED 3GSIA 2NVXK 4GTCA 3PO2C 4A3EC 1WOOA 1V5VA 3S2DC 5M3FK 4C2MK 5EGEA 4BXXC 3GTGA 4OINA 1IW7A 4MEXA 4GTLA 1WCMC 4MQ9A 4GTDA 4LLGA 3L4KA 1JVIA 4NOIA 3FHZA 2WB1L 1TWGC 4BBRC 5C44C 2NVYA 4BY7K 3S1RK 2YU9A 3T01A 3GTKC 4KN7A 1TWHA 3H3VL 5JFEA 1WORA 4XCHA 1F7VA 2EBBA 4Y7NK 2R92K 1R9TA 1I50C 3T00A 2JA6A 3GTLA 1I3QK 3OEPA 1F7UA 2E2HK 3V4GA 4GT9A 1IBAA 4ZH4A 3CQZK 1YX2A 5CHPA 4A3FK 1AB4A 1Y1WC 3EQLA 3I4MK 1TWCK 2Y0SL 3DXJA 1XZQA 4G7HA 2JA5A 5CJ9A 4QIWL 1X31C 3S1NK 2JH3A 1SFOC 2JA7K 4BLBA 4J3NA 3S17K 1WOPA 3H0GA 2PA8L 3A8IA 4KN4A 4A3LK 3FOEA 4P5BA 3HOZK 4LJZA 2PPBA 2FQTA 4BY1K 3GTQC 1BGWA 1ZXOA 3K7AC 3N0BA 2W7VA 3GTMK 4G0WA 2B63C 3AD8C 1K83C 4KMHA 2R92A 5IOSA 3WODA 3GTOC 3M3YC 4OIPA 4A3CK 1BJTA 3GTGK 1O2BA 1I3QA 2A69A 5C4JC 1Y1VC 4MEYA 1TWFC 1ZVUA 4KB2A 1VRQC 4A3JC 1XXAA 3I4NC 1B4AA 4WJ3M 1TWAC 1TWGA 3OPFA 4KATA 4A3IK 1WSRA 4C3HC 3HOWC 3TTGA 3HOXC 3AD7C 5M5YK 5IOQA 3JSTA 2NVYK 2PA8D 2PMZD 2E2IC 2R7ZC 5IP7C 2YU9K 2ZUEA 1IE0A 2ZFZA 1TWHK 3Q3QA 2NVTC 1WQFA 5M5XK 1DD5A 5IP9C 3HOUC 3HOVC 1I50A 5IYCC 4BBSC 2KWAA 2E2JC 4KM8A 4AYBD 1R9TK 1EK8A 3S14K 2GAHC 2JA6K 2VUMA 4A93C 4A3KC 3GTLK 2R93C 1XZPB 5C3EC 5IYDK 3S1QK 1Y1WA 3BUEA 2NVXC 3RZDK 4YG2A 4KMDA 4PABA 4LK0A 2JA5K 3ADAC 4KDDA 4A3GK 3S2HK 4A3MK 4BKWA 2GSOA 3H0GK 4KC6A 4QJVB 3GTQA 4GTFA 1EFWA 3FKIC 5FLMK 4KARA 1PJ5A 4Y52K 3PO2K 3S16K 2P5MA 5TJ3A 3GTJA 5JVOA 3GIRA 1O2AA 1B4BA 4BXXK 1Y1VA 1O26A 4LQYA 1TWFA 2E2HC 3S1MK 2PHCB 2V6SA
chains in the Genus database with same CATH topology
1DCHA 2V6TA 4WILA 4C45A 1F93A 1RU0A 1DCPA 3JSTA 2V6UA 3HXAA 2V6SA 4LOWA 1USOA 1DCOA 2EBBA 1USMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DCH A;  2V6T A;  4WIL A;  4C45 A;  1F93 A;  1RU0 A;  1DCP A;  3JST A;  2V6U A;  3HXA A;  2V6S A;  4LOW A;  1USO A;  1DCO A;  2EBB A;  1USM A; 
#chains in the Genus database with same CATH topology
 1WCM K;  1L0W A;  3CQZ C;  3HKZ L;  3RZO K;  3LAJ A;  3AQO A;  3QX3 A;  4YFK A;  4LOW A;  3N0C A;  4A3D K;  1TWG K;  1TWC C;  3S15 C;  1WIH A;  3S1N C;  2A6H A;  1RU0 A;  4FZB A;  2A68 A;  2WB1 D;  3BP8 C;  5M5W K;  4KMU A;  5IOR A;  1I50 K;  1O29 A;  4RMF A;  3H3V D;  4A3L C;  4BY1 C;  1XXC A;  4PAA A;  3AH5 A;  2VUM K;  3N3Y A;  4GFQ A;  4XLP A;  4OIO A;  1XZP A;  1Y1W K;  1DCP A;  1VH2 A;  3HOY K;  1VGX A;  4C3I C;  2P8T A;  1J98 A;  4Q4Z A;  2V6T A;  2Y3P A;  1HQM A;  2NVQ C;  2D6F C;  1INN A;  4X6A C;  4A3C C;  1EQR A;  4KB4 A;  1WCM A;  2Y0S D;  5E68 A;  5EGH A;  4QIW D;  5IYB C;  1BDF A;  5D4D A;  4A3I C;  3GTP C;  1USM A;  3AD9 C;  1YNJ A;  3GTQ K;  3GTK A;  4QJV A;  2YU9 C;  1EI6 A;  1I6H C;  3MML B;  4C3J C;  4A3B K;  1UV7 A;  2A6E A;  3GTJ K;  1R9T C;  4GTE A;  3S14 C;  4C45 A;  3PO3 C;  1JOE A;  2JA6 C;  1DCO A;  3GTL C;  1Y1V K;  1TWF K;  1ZYR A;  2CFA B;  3S1Q C;  4A3J K;  3I4N K;  4YFN A;  3RZD C;  1F9N A;  4C3H K;  3HOW K;  2XCO A;  5C4X K;  4C2M C;  4KMA A;  1VJE A;  2JA5 C;  4G7Z A;  3M4O K;  4P9S A;  4A3G C;  2JA8 K;  3S2H C;  1SFO A;  4A3M C;  1IL2 A;  1O27 A;  2NVT K;  4XSZ A;  5IOT A;  5IYC K;  3HOV K;  3GEI A;  3H0G C;  2E2J K;  4KM9 A;  2GSN A;  3BP3 A;  4A93 K;  4A3K K;  3G4A A;  4BY7 C;  3IPJ A;  3S1R C;  1IS1 A;  4Y52 C;  1BS2 A;  4GTA A;  3HXA A;  3LAP A;  1WQH A;  3TFI A;  3S16 C;  3S0X A;  4JK1 A;  2CW0 A;  1C0A A;  4Y7N C;  1K83 A;  2B63 A;  2R92 C;  4A3E K;  3S2D K;  2V6U A;  3GTO A;  1DCH A;  3S1M C;  4M1X A;  1I3Q C;  1IQ0 A;  3RZO C;  1ISE A;  1J6X A;  4YFX A;  3GTP A;  1TWA A;  4G0V A;  3NUH A;  4A3F C;  4A3D C;  3L4J A;  3I4M C;  4BBR K;  1HI9 A;  1F93 A;  3FKI K;  5C44 K;  1J6V A;  5HL8 A;  2R7Z A;  1VLO A;  1G51 A;  2E2I A;  2RH6 A;  3GTK K;  1USO A;  3T02 A;  1WQG A;  1GE9 A;  4OIR A;  2JA7 C;  2WAQ L;  3AQP A;  2O5I A;  1SMY A;  1XPP A;  3SZY A;  1I6V A;  3S17 C;  3GEH A;  4WIL A;  5FJ8 K;  5M3M K;  5TMC A;  4GTB A;  3HOZ C;  2VUM C;  2R93 A;  2XCQ A;  4P5A A;  2CFA A;  2GAG C;  4FM9 A;  3HOY C;  2NVX A;  1XXB A;  3LPX A;  3S15 K;  3GTM C;  3GEE A;  3HKZ D;  1O2F B;  5L46 A;  4GZY A;  1ZQ1 C;  1SFO K;  3ORE A;  3GTG C;  4OIQ A;  4KAW X;  2PMZ L;  3A8K A;  3SZZ A;  2WAQ D;  3FOF A;  4XLN A;  1JQW A;  3TFJ A;  4AH6 A;  3FKI A;  2NVY C;  3VA7 A;  2GSU A;  4AYB L;  1O28 A;  4C3I K;  1TWH C;  4A3B C;  3K7A K;  1YNN A;  1ZBS A;  2B63 K;  1K83 K;  3GTJ C;  2ZUF A;  2NVQ K;  4X6A K;  3G4C A;  4LK1 A;  1PJ6 A;  3GTO K;  3M3Y K;  2BE5 A;  2E2H A;  3CAG A;  4G7O A;  3CQZ A;  5C4J K;  5IYD C;  2RGR A;  5IYB K;  2XCR B;  3GTP K;  4Q5S A;  1TWA K;  4XSX A;  4BLA A;  1TWC A;  1XZQ B;  1O24 A;  1WOS A;  5C4X C;  3HOX K;  4DDQ A;  3M4O C;  2FQO A;  4ILD A;  2JA8 C;  2E2I K;  2R7Z K;  2JA7 A;  4KAS A;  5IP7 K;  1I6H K;  4C3J K;  2O5J A;  5IP9 K;  1J6W A;  3HOU K;  1EH1 A;  1WSV A;  4WJ4 A;  1YCL A;  4BBS K;  1KQ4 A;  4O2D A;  3PO3 K;  5TMF A;  1O25 A;  4LR2 A;  1PJ7 A;  4G0U A;  2R93 K;  3GDZ A;  5C3E K;  3A8J A;  5FLM C;  3TFH A;  3GTM A;  3ERE D;  3GSI A;  2NVX K;  4GTC A;  3PO2 C;  4A3E C;  1WOO A;  1V5V A;  3S2D C;  5M3F K;  4C2M K;  5EGE A;  4BXX C;  3GTG A;  4OIN A;  1IW7 A;  4MEX A;  4GTL A;  1WCM C;  4MQ9 A;  4GTD A;  4LLG A;  3L4K A;  1JVI A;  4NOI A;  3FHZ A;  2WB1 L;  1TWG C;  4BBR C;  5C44 C;  2NVY A;  4BY7 K;  3S1R K;  2YU9 A;  3T01 A;  3GTK C;  4KN7 A;  1TWH A;  3H3V L;  5JFE A;  1WOR A;  4XCH A;  1F7V A;  2EBB A;  4Y7N K;  2R92 K;  1R9T A;  1I50 C;  3T00 A;  2JA6 A;  3GTL A;  1I3Q K;  3OEP A;  1F7U A;  2E2H K;  3V4G A;  4GT9 A;  1IBA A;  4ZH4 A;  3CQZ K;  1YX2 A;  5CHP A;  4A3F K;  1AB4 A;  1Y1W C;  3EQL A;  3I4M K;  1TWC K;  2Y0S L;  3DXJ A;  1XZQ A;  4G7H A;  2JA5 A;  5CJ9 A;  4QIW L;  1X31 C;  3S1N K;  2JH3 A;  1SFO C;  2JA7 K;  4BLB A;  4J3N A;  3S17 K;  1WOP A;  3H0G A;  2PA8 L;  3A8I A;  4KN4 A;  4A3L K;  3FOE A;  4P5B A;  3HOZ K;  4LJZ A;  2PPB A;  2FQT A;  4BY1 K;  3GTQ C;  1BGW A;  1ZXO A;  3K7A C;  3N0B A;  2W7V A;  3GTM K;  4G0W A;  2B63 C;  3AD8 C;  1K83 C;  4KMH A;  2R92 A;  5IOS A;  3WOD A;  3GTO C;  3M3Y C;  4OIP A;  4A3C K;  1BJT A;  3GTG K;  1O2B A;  1I3Q A;  2A69 A;  5C4J C;  1Y1V C;  4MEY A;  1TWF C;  1ZVU A;  4KB2 A;  1VRQ C;  4A3J C;  1XXA A;  3I4N C;  1B4A A;  4WJ3 M;  1TWA C;  1TWG A;  3OPF A;  4KAT A;  4A3I K;  1WSR A;  4C3H C;  3HOW C;  3TTG A;  3HOX C;  3AD7 C;  5M5Y K;  5IOQ A;  3JST A;  2NVY K;  2PA8 D;  2PMZ D;  2E2I C;  2R7Z C;  5IP7 C;  2YU9 K;  2ZUE A;  1IE0 A;  2ZFZ A;  1TWH K;  3Q3Q A;  2NVT C;  1WQF A;  5M5X K;  1DD5 A;  5IP9 C;  3HOU C;  3HOV C;  1I50 A;  5IYC C;  4BBS C;  2KWA A;  2E2J C;  4KM8 A;  4AYB D;  1R9T K;  1EK8 A;  3S14 K;  2GAH C;  2JA6 K;  2VUM A;  4A93 C;  4A3K C;  3GTL K;  2R93 C;  1XZP B;  5C3E C;  5IYD K;  3S1Q K;  1Y1W A;  3BUE A;  2NVX C;  3RZD K;  4YG2 A;  4KMD A;  4PAB A;  4LK0 A;  2JA5 K;  3ADA C;  4KDD A;  4A3G K;  3S2H K;  4A3M K;  4BKW A;  2GSO A;  3H0G K;  4KC6 A;  4QJV B;  3GTQ A;  4GTF A;  1EFW A;  3FKI C;  5FLM K;  4KAR A;  1PJ5 A;  4Y52 K;  3PO2 K;  3S16 K;  2P5M A;  5TJ3 A;  3GTJ A;  5JVO A;  3GIR A;  1O2A A;  1B4B A;  4BXX K;  1Y1V A;  1O26 A;  4LQY A;  1TWF A;  2E2H C;  3S1M K;  2PHC B;  2V6S A; 
#chains in the Genus database with same CATH homology
 1DCH A;  2V6T A;  4WIL A;  4C45 A;  1F93 A;  1RU0 A;  1DCP A;  3JST A;  2V6U A;  3HXA A;  2V6S A;  4LOW A;  1USO A;  1DCO A;  2EBB A;  1USM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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