4WWZA

Unda complexed with 2,3-dodecenoic acid
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
256
structure length
256
Chain Sequence
IDTFSRTGPLMEAASYPAWTQQLIQDCSESKRRVVEHELYQRMRDNKLSAKVMRQYLIGGWPVVEQFALYMAQNLTKTRFARHPGEDMARRWLMRNIRVELNHADYWVHWSRAHGVTLEDLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEGATGEWSALVCSNGIYAAAFPEEDRKRAMKWLKMHAQYDDAHPWEALEIIVTLAGLNPTKALQAELRQAICKSYDYMYLFLERCMQQEKTAVTRERLA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords TENA/THI-4 family protein
publication title Microbial biosynthesis of medium-chain 1-alkenes by a nonheme iron oxidase.
pubmed doi rcsb
source organism Pseudomonas protegens pf-5
total genus 103
structure length 256
sequence length 256
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-11-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF14518 Haem_oxygenas_2 Iron-containing redox enzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.910.10 Mainly Alpha Up-down Bundle Heme Oxygenase; Chain A Heme oxygenase-like 4wwzA00
2ZVUA 1J77A 1WWMA 2A2MA 1TYHA 2F2GA 3B5OA 1RCWA 1WZGA 1OZEA 4G7LA 4G8WA 4WWJA 1V8XA 1T5PA 1P3UA 1XK1A 2QPPA 4G7PA 1UDDA 4G7TA 3BJDA 4FN6A 4RAJA 1IW1A 1WNVA 1DVEA 3OQLA 1NI6A 4GOHA 2QCXA 1S13A 1TWRA 1P3TA 1P3VA 1WZFA 2A6BA 1N45A 2E7EA 2RGZA 1OZLA 3MVUA 1ULXA 1J2CA 3I9UA 1WE1A 1XK0A 1XJZA 4WWZA 3NO6A 1DVGA 3DDEA 2Q32A 1VGIA 1TWNA 1WNXA 1WOVA 1YAFA 3HNHA 3MOOA 2Z68A 1IVJA 1IX4A 1TO9B 2RD3A 1YAKA 1XK3A 4G99A 2DY5A 3CZYA 4WMHA 1WZDA 4WD4A 2GM8A 1OYKA 4G7UA 1N3UA 1OZWA 4WX0A 3I8RA 1OYLA 1OTWA 3HLXA 3IBXA 1SK7A 1TO9A 1Z72A 1IW0A 4NY7A 3HMLA 1XK2A 1WOXA 5BTQA 4G98A 4LQXA 2GM7A 2Q4XA 1J02A 3I9TA 4GPFA 1UBBA 2A2OA 1RTWA 3RM5A 1IRMA 1OTVA 4G8UA 4G8PA 1WNWA 4MECA 2QZCA 1S8CA 4GPCA 4GPHA 1OZRA 3K4FA 3HOKA 1IX3A 3B5PA 1WOWA 3TGMA
chains in the Genus database with same CATH superfamily
2ZVUA 1J77A 1WWMA 2A2MA 1TYHA 2F2GA 3B5OA 1RCWA 1WZGA 1OZEA 4G7LA 4G8WA 4WWJA 1V8XA 1T5PA 1P3UA 1XK1A 2QPPA 4G7PA 1UDDA 4G7TA 3BJDA 4FN6A 4RAJA 1IW1A 1WNVA 1DVEA 3OQLA 1NI6A 4GOHA 2QCXA 1S13A 1TWRA 1P3TA 1P3VA 1WZFA 2A6BA 1N45A 2E7EA 2RGZA 1OZLA 3MVUA 1ULXA 1J2CA 3I9UA 1WE1A 1XK0A 1XJZA 4WWZA 3NO6A 1DVGA 3DDEA 2Q32A 2LCUA 1VGIA 1TWNA 1WNXA 1WOVA 1YAFA 3HNHA 3MOOA 2Z68A 1IVJA 1IX4A 1TO9B 2RD3A 1YAKA 1XK3A 4G99A 2DY5A 3CZYA 4WMHA 1WZDA 4WD4A 2GM8A 1OYKA 4G7UA 1N3UA 1OZWA 4WX0A 3I8RA 1OYLA 1OTWA 3HLXA 3IBXA 1SK7A 1TO9A 1Z72A 1IW0A 4NY7A 3HMLA 1XK2A 1WOXA 5BTQA 4G98A 4LQXA 2GM7A 2Q4XA 1J02A 3I9TA 4GPFA 1UBBA 2A2OA 1RTWA 3RM5A 1IRMA 1OTVA 4G8UA 4G8PA 1WNWA 4MECA 2QZCA 1S8CA 4GPCA 4GPHA 1OZRA 3K4FA 3HOKA 1IX3A 3B5PA 1WOWA 3TGMA
chains in the Genus database with same CATH topology
2ZVUA 1J77A 1WWMA 2A2MA 1TYHA 2F2GA 3B5OA 1RCWA 1WZGA 1OZEA 4G7LA 4G8WA 4WWJA 1V8XA 1T5PA 1P3UA 1XK1A 2QPPA 4G7PA 1UDDA 4G7TA 3BJDA 4FN6A 4RAJA 1IW1A 1WNVA 1DVEA 3OQLA 1NI6A 4GOHA 2QCXA 1S13A 1TWRA 1P3TA 1P3VA 1WZFA 2A6BA 1N45A 2E7EA 2RGZA 1OZLA 3MVUA 1ULXA 1J2CA 3I9UA 1WE1A 1XK0A 1XJZA 4WWZA 3NO6A 1DVGA 3DDEA 2Q32A 1VGIA 1TWNA 1WNXA 1WOVA 1YAFA 3HNHA 3MOOA 2Z68A 1IVJA 1IX4A 1TO9B 2RD3A 1YAKA 1XK3A 4G99A 2DY5A 3CZYA 4WMHA 1WZDA 4WD4A 2GM8A 1OYKA 4G7UA 1N3UA 1OZWA 4WX0A 3I8RA 1OYLA 1OTWA 3HLXA 3IBXA 1SK7A 1TO9A 1Z72A 1IW0A 4NY7A 3HMLA 1XK2A 1WOXA 5BTQA 4G98A 4LQXA 2GM7A 2Q4XA 1J02A 3I9TA 4GPFA 1UBBA 2A2OA 1RTWA 3RM5A 1IRMA 1OTVA 4G8UA 4G8PA 1WNWA 4MECA 2QZCA 1S8CA 4GPCA 4GPHA 1OZRA 3K4FA 3HOKA 1IX3A 3B5PA 1WOWA 3TGMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ZVU A;  1J77 A;  1WWM A;  2A2M A;  1TYH A;  2F2G A;  3B5O A;  1RCW A;  1WZG A;  1OZE A;  4G7L A;  4G8W A;  4WWJ A;  1V8X A;  1T5P A;  1P3U A;  1XK1 A;  2QPP A;  4G7P A;  1UDD A;  4G7T A;  3BJD A;  4FN6 A;  4RAJ A;  1IW1 A;  1WNV A;  1DVE A;  3OQL A;  1NI6 A;  4GOH A;  2QCX A;  1S13 A;  1TWR A;  1P3T A;  1P3V A;  1WZF A;  2A6B A;  1N45 A;  2E7E A;  2RGZ A;  1OZL A;  3MVU A;  1ULX A;  1J2C A;  3I9U A;  1WE1 A;  1XK0 A;  1XJZ A;  4WWZ A;  3NO6 A;  1DVG A;  3DDE A;  2Q32 A;  1VGI A;  1TWN A;  1WNX A;  1WOV A;  1YAF A;  3HNH A;  3MOO A;  2Z68 A;  1IVJ A;  1IX4 A;  1TO9 B;  2RD3 A;  1YAK A;  1XK3 A;  4G99 A;  2DY5 A;  3CZY A;  4WMH A;  1WZD A;  4WD4 A;  2GM8 A;  1OYK A;  4G7U A;  1N3U A;  1OZW A;  4WX0 A;  3I8R A;  1OYL A;  1OTW A;  3HLX A;  3IBX A;  1SK7 A;  1TO9 A;  1Z72 A;  1IW0 A;  4NY7 A;  3HML A;  1XK2 A;  1WOX A;  5BTQ A;  4G98 A;  4LQX A;  2GM7 A;  2Q4X A;  1J02 A;  3I9T A;  4GPF A;  1UBB A;  2A2O A;  1RTW A;  3RM5 A;  1IRM A;  1OTV A;  4G8U A;  4G8P A;  1WNW A;  4MEC A;  2QZC A;  1S8C A;  4GPC A;  4GPH A;  1OZR A;  3K4F A;  3HOK A;  1IX3 A;  3B5P A;  1WOW A;  3TGM A; 
#chains in the Genus database with same CATH topology
 2ZVU A;  1J77 A;  1WWM A;  2A2M A;  1TYH A;  2F2G A;  3B5O A;  1RCW A;  1WZG A;  1OZE A;  4G7L A;  4G8W A;  4WWJ A;  1V8X A;  1T5P A;  1P3U A;  1XK1 A;  2QPP A;  4G7P A;  1UDD A;  4G7T A;  3BJD A;  4FN6 A;  4RAJ A;  1IW1 A;  1WNV A;  1DVE A;  3OQL A;  1NI6 A;  4GOH A;  2QCX A;  1S13 A;  1TWR A;  1P3T A;  1P3V A;  1WZF A;  2A6B A;  1N45 A;  2E7E A;  2RGZ A;  1OZL A;  3MVU A;  1ULX A;  1J2C A;  3I9U A;  1WE1 A;  1XK0 A;  1XJZ A;  4WWZ A;  3NO6 A;  1DVG A;  3DDE A;  2Q32 A;  2LCU A;  1VGI A;  1TWN A;  1WNX A;  1WOV A;  1YAF A;  3HNH A;  3MOO A;  2Z68 A;  1IVJ A;  1IX4 A;  1TO9 B;  2RD3 A;  1YAK A;  1XK3 A;  4G99 A;  2DY5 A;  3CZY A;  4WMH A;  1WZD A;  4WD4 A;  2GM8 A;  1OYK A;  4G7U A;  1N3U A;  1OZW A;  4WX0 A;  3I8R A;  1OYL A;  1OTW A;  3HLX A;  3IBX A;  1SK7 A;  1TO9 A;  1Z72 A;  1IW0 A;  4NY7 A;  3HML A;  1XK2 A;  1WOX A;  5BTQ A;  4G98 A;  4LQX A;  2GM7 A;  2Q4X A;  1J02 A;  3I9T A;  4GPF A;  1UBB A;  2A2O A;  1RTW A;  3RM5 A;  1IRM A;  1OTV A;  4G8U A;  4G8P A;  1WNW A;  4MEC A;  2QZC A;  1S8C A;  4GPC A;  4GPH A;  1OZR A;  3K4F A;  3HOK A;  1IX3 A;  3B5P A;  1WOW A;  3TGM A; 
#chains in the Genus database with same CATH homology
 2ZVU A;  1J77 A;  1WWM A;  2A2M A;  1TYH A;  2F2G A;  3B5O A;  1RCW A;  1WZG A;  1OZE A;  4G7L A;  4G8W A;  4WWJ A;  1V8X A;  1T5P A;  1P3U A;  1XK1 A;  2QPP A;  4G7P A;  1UDD A;  4G7T A;  3BJD A;  4FN6 A;  4RAJ A;  1IW1 A;  1WNV A;  1DVE A;  3OQL A;  1NI6 A;  4GOH A;  2QCX A;  1S13 A;  1TWR A;  1P3T A;  1P3V A;  1WZF A;  2A6B A;  1N45 A;  2E7E A;  2RGZ A;  1OZL A;  3MVU A;  1ULX A;  1J2C A;  3I9U A;  1WE1 A;  1XK0 A;  1XJZ A;  4WWZ A;  3NO6 A;  1DVG A;  3DDE A;  2Q32 A;  1VGI A;  1TWN A;  1WNX A;  1WOV A;  1YAF A;  3HNH A;  3MOO A;  2Z68 A;  1IVJ A;  1IX4 A;  1TO9 B;  2RD3 A;  1YAK A;  1XK3 A;  4G99 A;  2DY5 A;  3CZY A;  4WMH A;  1WZD A;  4WD4 A;  2GM8 A;  1OYK A;  4G7U A;  1N3U A;  1OZW A;  4WX0 A;  3I8R A;  1OYL A;  1OTW A;  3HLX A;  3IBX A;  1SK7 A;  1TO9 A;  1Z72 A;  1IW0 A;  4NY7 A;  3HML A;  1XK2 A;  1WOX A;  5BTQ A;  4G98 A;  4LQX A;  2GM7 A;  2Q4X A;  1J02 A;  3I9T A;  4GPF A;  1UBB A;  2A2O A;  1RTW A;  3RM5 A;  1IRM A;  1OTV A;  4G8U A;  4G8P A;  1WNW A;  4MEC A;  2QZC A;  1S8C A;  4GPC A;  4GPH A;  1OZR A;  3K4F A;  3HOK A;  1IX3 A;  3B5P A;  1WOW A;  3TGM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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