4YFNA

Escherichia coli rna polymerase in complex with squaramide compound 14 (n-[3,4-dioxo-2-(4-{[4-(trifluoromethyl)benzyl]amino}piperidin-1-yl)cyclobut-1-en-1-yl]-3,5-dimethyl-1,2-oxazole-4-sulfonamide)
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
235
structure length
235
Chain Sequence
b'MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLR'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase subunit alpha
source organism Escherichia coli o139:h28 (strain e24377a / etec)
molecule tags Transcription/transcription inhibitor
total genus 38
structure length 235
sequence length 235
chains with identical sequence B, G, H
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2015-02-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4yfnA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4yfnA01
3HOVC 3HOWC 3H0GK 4C3JC 2NVXK 2E2HK 3PO3C 3S1QC 3S1RC 3CQZK 5C44C 3PO2C 4KN4A 2VUMC 2NVTC 4BXXC 3K7AC 3S1NC 3HOVK 4XLNA 2R7ZK 4OINA 3M3YC 2JA7C 1TWGK 4A3CC 5IYDC 3HOZK 3S2HC 3RZOK 3PO3K 3GTKK 3PO2K 1K83C 2PMZL 4LK1A 2NVTK 2A6EA 4Y52C 4A3DC 3S17K 5IP9C 2JA7K 4JK1A 4A3JK 4A3CK 3S2HK 1TWCC 4G7HA 2JA5C 3S2DK 4C2MC 4X6AK 4ZH4A 4A3FC 4MEXA 4XLPA 3GTJC 4Q5SA 2R93C 2E2JK 3H3VL 4XSZA 3HOYK 1I6HK 1I50K 2WAQL 3HOUC 1TWCK 3GTGC 3GTLK 1TWFK 3GTJK 4C3HC 1TWAK 4A3IK 3S14K 4OIPA 3S1MC 4A3GK 2O5IA 2O5JA 4MQ9A 4BBRK 2NVQK 3GTMK 3DXJA 2PA8L 3HKZL 1WCMC 4Y7NC 3RZDC 2Y0SL 1R9TC 4A3LK 4OIRA 4AYBL 4C3JK 2CW0A 3HOWK 2E2IC 3S1QK 3S1RK 4XSXA 4BY1C 5C44K 5IYBC 4OIOA 2VUMK 5IYCC 5M5WK 3HOXC 3K7AK 4QIWL 5M3FK 2BE5A 3S1NK 4BXXK 3FKIC 1BDFA 3M3YK 4BBSK 5IYDK 1I3QC 1SFOC 5TMCA 1K83K 1Y1WC 3I4NC 4LLGA 2B63C 4KN7A 3GTPC 4A3MC 4A3DK 4Y52K 1XPPA 5IP9K 4LK0A 3S15C 4KMUA 5M5XK 3EQLA 2JA8C 2JA5K 4BBSC 4C2MK 5IP7C 1Y1WK 5C3EC 5D4DA 5C4JC 4A3FK 2B63K 2R93K 2R92C 2WB1L 1Y1VC 4MEYA 3HOUK 3I4MC 3GTGK 4QJVA 3GTQC 4A93C 5FLMC 3M4OC 4C3HK 3S1MK 3GTOC 4GZYA 4YFKA 1ZYRA 1YNJA 4G7ZA 3H3VD 4A3EC 2PPBA 2WAQD 4C3IC 4A3KC 1WCMK 4Y7NK 2NVYC 3RZDK 4Q4ZA 1R9TK 4A3BC 2JA6C 2E2IK 4QJVB 4BY1K 5IYBK 2NVXC 5FJ8K 4LJZA 4YFNA 2E2HC 5IYCK 3CQZC 3WODA 4BY7C 3HOXK 5M5YK 4NOIA 3FKIK 1I3QK 2PA8D 3HKZD 1SFOK 2R7ZC 2Y0SD 1TWGC 4AYBD 3HOZC 3RZOC 3I4NK 2YU9C 5C4XC 4A3MK 3GTPK 3GTKC 4BY7K 5TMFA 3S15K 2PMZD 3S17C 1YNNA 4QIWD 2JA8K 1TWHC 1I6VA 1HQMA 4A3JC 5C3EK 5C4XK 5IP7K 5C4JK 2YU9K 2R92K 4X6AC 4YG2A 3S2DC 1Y1VK 3I4MK 2E2JC 3GTQK 4A93K 3S16C 1TWHK 5FLMK 3HOYC 1IW7A 1I50C 1I6HC 3M4OK 4G7OA 4OIQA 3GTLC 3GTOK 1TWFC 1TWAC 4A3IC 3S14C 3S16K 4A3EK 1SMYA 2WB1D 3H0GC 4A3GC 4C3IK 4A3KK 2A68A 4YFXA 2NVYK 2A6HA 4A3BK 4BBRC 2NVQC 3GTMC 5M3MK 2JA6K 2A69A 4A3LC
chains in the Genus database with same CATH superfamily
2NVXK 3HOWC 2ZJQS 3PIPS 2V6SA 3H0GK 3TFHA 3PO3C 1DCOA 1K83A 3S1RC 5C44C 3L4JA 4KN4A 3K7AC 1TWGK 3PO3K 5IYDC 1TWFA 3S2HC 3L4KA 3GTKK 1J98A 1K83C 2PMZL 3LPXA 1WQHA 5EGEA 4JK1A 3S2HK 2D6FC 4MEXA 4A3FC 4Q5SA 2WAQL 4U67S 1WCMA 3GTLK 4KARA 1TWFK 4A3IK 2E2IA 1XZQB 3S1MC 4A3GK 2P5MA 1KQ4A 4WJ3M 3PIOS 3GTMK 2NVQK 2PA8L 1WCMC 3RZDC 4P9SA 4OIRA 2JA5A 5L46A 3TFJA 2E2IC 2B63A 3S1QK 4XSXA 3HOXC 1XXAA 1I3QC 4PABA 4GTBA 3I4NC 2B63C 1O2FB 4A3MC 1XPPA 4IO9S 1PJ7A 3S15C 1WIHA 2XCOA 2JA8C 2JA5K 4C2MK 5IP7C 4P5BA 2B63K 5HQHA 2ZUEA 3HOUK 1ZVUA 2NVYA 3HXAA 4C45A 4GFQA 4LR2A 4YFKA 3V4GA 2E2HA 4G7ZA 1WOPA 4RMFA 3GTPA 4C3IC 1YCLA 2NVYC 4Q4ZA 2JA6C 3G4CA 1EFWA 4YFNA 2E2HC 3DLLS 3GTQA 1WOOA 3N0BA 4BLBA 1SFOK 3HKZD 1WSRA 2Y0SD 1BJTA 3RZOC 1INNA 3GTPK 2PMZD 4QIWD 1HQMA 4GT9A 2E2JC 5JVGS 3GTQK 3HOYC 1I6HC 1I50C 4DDQA 3AD9C 3G4AA 3S14C 1EH1A 4A3EK 4IOCS 2VUMA 5TJ3A 2A68A 4KDDA 4KMAA 1O25A 2A69A 4A3LC 1O27A 4P5AA 2VUMC 1TWCA 4OINA 3M3YC 4KC6A 2R93A 4Y52C 4A3DC 5IP9C 4A3JK 5HL8A 1TWCC 2GSUA 4BLAA 3S2DK 1IBAA 4ZH4A 4XLPA 2R93C 3AH5A 2KXYA 2CFAA 1TWCK 1VRQC 1C0AA 3A8JA 1USMA 1IE0A 1VJEA 3GEEA 4FM9A 2O5JA 4LQYA 4BKWA 4MQ9A 3HKZL 1EK8A 1O28A 4Y7NC 1J6WA 2Y0SL 3QX3A 3HOWK 4XCHA 1Y1WA 3OPFA 3S1RK 4BY1C 5C44K 3K7AK 4QIWL 2BE5A 1RU0A 1BDFA 1XXBA 5IYDK 3NUHA 2R92A 3A8KA 1K83K 3ADAC 1Y1WC 1Y1VA 4LLGA 1Y1WK 4A3FK 5D4DA 2R92C 3GDZA 3MMLB 1Y1VC 3I4MC 4QJVA 5FLMC 1I3QA 3S1MK 3GTOC 1G51A 3H3VD 3CQZA 4WJ4A 4A3KC 1WCMK 3RZDK 2R7ZA 3AQOA 1F93A 2E2IK 2YU9A 1JOEA 4G0WA 1HI9A 2GAHC 3CQZC 3WODA 2PHCB 3HOXK 4J3NA 5DM7S 1I3QK 2R7ZC 3HOZC 4AYBD 3I4NK 2YU9C 5HL7S 4A3MK 4KB4A 3CF5S 3TFIA 3S15K 3S17C 1DCHA 2JA8K 5IP7K 2L5NA 1TWAA 2YU9K 2JH3A 2JA6A 1F7UA 4X6AC 1XZPB 2KQ1A 5IOQA 2RGRA 1J6XA 2GSNA 3BP8C 4OIQA 4G0VA 1TWAC 1FEUA 2WB1D 4C3IK 2KWAA 2NVYK 2A6HA 4BBRC 2JA6K 3HOVC 2GAGC 4C3JC 1IS1A 3S0XA 2E2HK 1O26A 3LAJA 2W7VA 3T00A 3IPJA 3PO2C 3GEHA 1I50A 2NVTC 4BXXC 2ZJRS 1VGXA 3S1NC 2CFAB 4XLNA 5EGHA 3HOVK 4A3CC 3RZOK 3GTJA 3PO2K 2GSOA 3SZYA 1JVIA 4O2DA 1WQFA 2NVTK 3GTGA 4A3CK 4G7HA 3GTJC 2E2JK 3H3VL 3BUEA 4XSZA 3HOYK 1VH2A 4G0UA 1I50K 1O29A 1I6HK 3GTGC 4KATA 4C3HC 3GTJK 3S14K 5E68A 5JVOA 3FKIA 3ERED 3DXJA 1UV7A 4KMDA 1DD5A 5CJ9A 3A8IA 4WFBS 4A3LK 1R9TC 4AYBL 1GE9A 2CW0A 3LAPA 4WFAS 5IYBC 4OIOA 4FZBA 2VUMK 5IYCC 3AQPA 5M5WK 3FKIC 3SZZA 3M3YK 5TMCA 3GSIA 4A3DK 4Y52K 5IOTA 5IP9K 4GTAA 3GEIA 4LK0A 5M5XK 1VLOA 4BBSC 5C3EC 5C4JC 2P8TA 2R93K 2WB1L 4MEYA 4A93C 4AH6A 3M4OC 4KM8A 3T02A 2L3UA 1ZYRA 1XXCA 3N3YA 3TTGA 2PPBA 1JQWA 4Y7NK 3Q3QA 1YX2A 4A3BC 1TWGA 4BY1K 3GTKA 2NVXC 4LJZA 1TWHA 1TWGC 4KAWX 3FOFA 1WQGA 2ZUFA 3GTOA 1X31C 3GTKC 1V5VA 4GTEA 1YNNA 4GTDA 1TWHC 1I6VA 3GTLA 4ILDA 5IOSA 3CAGA 2R92K 4YG2A 1Y1VK 3I4MK 1IL2A 3OEPA 5IORA 1TWHK 5FLMK 1IW7A 3GTMA 4G7OA 3GTLC 4PAAA 3GTOK 1TWFC 2FQTA 5JFEA 4A3IC 3FOEA 4A3GC 1WORA 4A3KK 4WILA 2V6UA 3GTMC 2NVQC 5M3MK 2JA7A 4M1XA 1IQ0A 5CHPA 3S1QC 3CQZK 1ZXOA 5DM6S 2R7ZK 1ISEA 2JA7C 3HOZK 2KPUA 1O2BA 4LK1A 2A6EA 3S17K 2JA7K 2JA5C 4X6AK 4C2MC 4GTCA 2EBBA 3HOUC 4KM9A 4KB2A 4WCES 1F9NA 1TWAK 3N0CA 1B4BA 4OIPA 3BP3A 1USOA 2O5IA 4BBRK 1SFOA 4C3JK 1WSVA 3OREA 4BXXK 1DCPA 3S1NK 2ZFZA 1XZQA 5M3FK 1EQRA 4IOAS 3JSTA 2XCQA 1SFOC 3FHZA 4KN7A 3GTPC 3VA7A 2Y3PA 1L0WA 4KMUA 1PJ6A 3EQLA 2XCRB 1R9TA 3GTGK 3GTQC 4C3HK 4KASA 1J6VA 1BS2A 1O24A 4GZYA 1YNJA 4A3EC 2FQOA 5JVHS 2WAQD 1WOSA 2RH6A 1R9TK 3LYWA 4QJVB 4LOWA 4WFNS 5IYBK 5FJ8K 4KMHA 5IYCK 4BY7C 3T01A 5M5YK 4NOIA 3FKIK 3GIRA 1F7VA 2PA8D 1XZPA 2ZJPS 4BY7K 5C4XC 1EI6A 5TMFA 1ZQ1C 4WF9S 1AB4A 4BBSK 4A3JC 1ZBSA 5C3EK 5C4XK 5C4JK 3AD8C 3S2DC 3AD7C 4GTLA 2NVXA 3H0GA 4A93K 3S16C 1PJ5A 3M4OK 1O2AA 1B4AA 3S16K 1SMYA 3H0GC 2V6TA 1BGWA 4YFXA 4A3BK 4GTFA
chains in the Genus database with same CATH topology
3HOVC 3HOWC 3H0GK 4C3JC 2NVXK 2E2HK 3PO3C 3S1QC 3S1RC 3CQZK 5C44C 3PO2C 4KN4A 2VUMC 2NVTC 4BXXC 3K7AC 3S1NC 3HOVK 4XLNA 2R7ZK 4OINA 3M3YC 2JA7C 1TWGK 4A3CC 5IYDC 3HOZK 3S2HC 3RZOK 3PO3K 3GTKK 3PO2K 1K83C 2PMZL 4LK1A 2NVTK 2A6EA 4Y52C 4A3DC 3S17K 5IP9C 2JA7K 4JK1A 4A3JK 4A3CK 3S2HK 1TWCC 4G7HA 2JA5C 3S2DK 4C2MC 4X6AK 4ZH4A 4A3FC 4MEXA 4XLPA 3GTJC 4Q5SA 2R93C 2E2JK 3H3VL 4XSZA 3HOYK 1I6HK 1I50K 2WAQL 3HOUC 1TWCK 3GTGC 3GTLK 1TWFK 3GTJK 4C3HC 1TWAK 4A3IK 3S14K 4OIPA 3S1MC 4A3GK 2O5IA 2O5JA 4MQ9A 4BBRK 2NVQK 3GTMK 3DXJA 2PA8L 3HKZL 1WCMC 4Y7NC 3RZDC 2Y0SL 1R9TC 4A3LK 4OIRA 4AYBL 4C3JK 2CW0A 3HOWK 2E2IC 3S1QK 3S1RK 4XSXA 4BY1C 5C44K 5IYBC 4OIOA 2VUMK 5IYCC 5M5WK 3HOXC 3K7AK 4QIWL 5M3FK 2BE5A 3S1NK 4BXXK 3FKIC 1BDFA 3M3YK 4BBSK 5IYDK 1I3QC 1SFOC 5TMCA 1K83K 1Y1WC 3I4NC 4LLGA 2B63C 4KN7A 3GTPC 4A3MC 4A3DK 4Y52K 1XPPA 5IP9K 4LK0A 3S15C 4KMUA 5M5XK 3EQLA 2JA8C 2JA5K 4BBSC 4C2MK 5IP7C 1Y1WK 5C3EC 5D4DA 5C4JC 4A3FK 2B63K 2R93K 2R92C 2WB1L 1Y1VC 4MEYA 3HOUK 3I4MC 3GTGK 4QJVA 3GTQC 4A93C 5FLMC 3M4OC 4C3HK 3S1MK 3GTOC 4GZYA 4YFKA 1ZYRA 1YNJA 4G7ZA 3H3VD 4A3EC 2PPBA 2WAQD 4C3IC 4A3KC 1WCMK 4Y7NK 2NVYC 3RZDK 4Q4ZA 1R9TK 4A3BC 2JA6C 2E2IK 4QJVB 4BY1K 5IYBK 2NVXC 5FJ8K 4LJZA 4YFNA 2E2HC 5IYCK 3CQZC 3WODA 4BY7C 3HOXK 5M5YK 4NOIA 3FKIK 1I3QK 2PA8D 3HKZD 1SFOK 2R7ZC 2Y0SD 1TWGC 4AYBD 3HOZC 3RZOC 3I4NK 2YU9C 5C4XC 4A3MK 3GTPK 3GTKC 4BY7K 5TMFA 3S15K 2PMZD 3S17C 1YNNA 4QIWD 2JA8K 1TWHC 1I6VA 1HQMA 4A3JC 5C3EK 5C4XK 5IP7K 5C4JK 2YU9K 2R92K 4X6AC 4YG2A 3S2DC 1Y1VK 3I4MK 2E2JC 3GTQK 4A93K 3S16C 1TWHK 5FLMK 3HOYC 1IW7A 1I50C 1I6HC 3M4OK 4G7OA 4OIQA 3GTLC 3GTOK 1TWFC 1TWAC 4A3IC 3S14C 3S16K 4A3EK 1SMYA 2WB1D 3H0GC 4A3GC 4C3IK 4A3KK 2A68A 4YFXA 2NVYK 2A6HA 4A3BK 4BBRC 2NVQC 3GTMC 5M3MK 2JA6K 2A69A 4A3LC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOV C;  3HOW C;  3H0G K;  4C3J C;  2NVX K;  2E2H K;  3PO3 C;  3S1Q C;  3S1R C;  3CQZ K;  5C44 C;  3PO2 C;  4KN4 A;  2VUM C;  2NVT C;  4BXX C;  3K7A C;  3S1N C;  3HOV K;  4XLN A;  2R7Z K;  4OIN A;  3M3Y C;  2JA7 C;  1TWG K;  4A3C C;  5IYD C;  3HOZ K;  3S2H C;  3RZO K;  3PO3 K;  3GTK K;  3PO2 K;  1K83 C;  2PMZ L;  4LK1 A;  2NVT K;  2A6E A;  4Y52 C;  4A3D C;  3S17 K;  5IP9 C;  2JA7 K;  4JK1 A;  4A3J K;  4A3C K;  3S2H K;  1TWC C;  4G7H A;  2JA5 C;  3S2D K;  4C2M C;  4X6A K;  4ZH4 A;  4A3F C;  4MEX A;  4XLP A;  3GTJ C;  4Q5S A;  2R93 C;  2E2J K;  3H3V L;  4XSZ A;  3HOY K;  1I6H K;  1I50 K;  2WAQ L;  3HOU C;  1TWC K;  3GTG C;  3GTL K;  1TWF K;  3GTJ K;  4C3H C;  1TWA K;  4A3I K;  3S14 K;  4OIP A;  3S1M C;  4A3G K;  2O5I A;  2O5J A;  4MQ9 A;  4BBR K;  2NVQ K;  3GTM K;  3DXJ A;  2PA8 L;  3HKZ L;  1WCM C;  4Y7N C;  3RZD C;  2Y0S L;  1R9T C;  4A3L K;  4OIR A;  4AYB L;  4C3J K;  2CW0 A;  3HOW K;  2E2I C;  3S1Q K;  3S1R K;  4XSX A;  4BY1 C;  5C44 K;  5IYB C;  4OIO A;  2VUM K;  5IYC C;  5M5W K;  3HOX C;  3K7A K;  4QIW L;  5M3F K;  2BE5 A;  3S1N K;  4BXX K;  3FKI C;  1BDF A;  3M3Y K;  4BBS K;  5IYD K;  1I3Q C;  1SFO C;  5TMC A;  1K83 K;  1Y1W C;  3I4N C;  4LLG A;  2B63 C;  4KN7 A;  3GTP C;  4A3M C;  4A3D K;  4Y52 K;  1XPP A;  5IP9 K;  4LK0 A;  3S15 C;  4KMU A;  5M5X K;  3EQL A;  2JA8 C;  2JA5 K;  4BBS C;  4C2M K;  5IP7 C;  1Y1W K;  5C3E C;  5D4D A;  5C4J C;  4A3F K;  2B63 K;  2R93 K;  2R92 C;  2WB1 L;  1Y1V C;  4MEY A;  3HOU K;  3I4M C;  3GTG K;  4QJV A;  3GTQ C;  4A93 C;  5FLM C;  3M4O C;  4C3H K;  3S1M K;  3GTO C;  4GZY A;  4YFK A;  1ZYR A;  1YNJ A;  4G7Z A;  3H3V D;  4A3E C;  2PPB A;  2WAQ D;  4C3I C;  4A3K C;  1WCM K;  4Y7N K;  2NVY C;  3RZD K;  4Q4Z A;  1R9T K;  4A3B C;  2JA6 C;  2E2I K;  4QJV B;  4BY1 K;  5IYB K;  2NVX C;  5FJ8 K;  4LJZ A;  4YFN A;  2E2H C;  5IYC K;  3CQZ C;  3WOD A;  4BY7 C;  3HOX K;  5M5Y K;  4NOI A;  3FKI K;  1I3Q K;  2PA8 D;  3HKZ D;  1SFO K;  2R7Z C;  2Y0S D;  1TWG C;  4AYB D;  3HOZ C;  3RZO C;  3I4N K;  2YU9 C;  5C4X C;  4A3M K;  3GTP K;  3GTK C;  4BY7 K;  5TMF A;  3S15 K;  2PMZ D;  3S17 C;  1YNN A;  4QIW D;  2JA8 K;  1TWH C;  1I6V A;  1HQM A;  4A3J C;  5C3E K;  5C4X K;  5IP7 K;  5C4J K;  2YU9 K;  2R92 K;  4X6A C;  4YG2 A;  3S2D C;  1Y1V K;  3I4M K;  2E2J C;  3GTQ K;  4A93 K;  3S16 C;  1TWH K;  5FLM K;  3HOY C;  1IW7 A;  1I50 C;  1I6H C;  3M4O K;  4G7O A;  4OIQ A;  3GTL C;  3GTO K;  1TWF C;  1TWA C;  4A3I C;  3S14 C;  3S16 K;  4A3E K;  1SMY A;  2WB1 D;  3H0G C;  4A3G C;  4C3I K;  4A3K K;  2A68 A;  4YFX A;  2NVY K;  2A6H A;  4A3B K;  4BBR C;  2NVQ C;  3GTM C;  5M3M K;  2JA6 K;  2A69 A;  4A3L C; 
#chains in the Genus database with same CATH topology
 2NVX K;  3HOW C;  2ZJQ S;  3PIP S;  2V6S A;  3H0G K;  3TFH A;  3PO3 C;  1DCO A;  1K83 A;  3S1R C;  5C44 C;  3L4J A;  4KN4 A;  3K7A C;  1TWG K;  3PO3 K;  5IYD C;  1TWF A;  3S2H C;  3L4K A;  3GTK K;  1J98 A;  1K83 C;  2PMZ L;  3LPX A;  1WQH A;  5EGE A;  4JK1 A;  3S2H K;  2D6F C;  4MEX A;  4A3F C;  4Q5S A;  2WAQ L;  4U67 S;  1WCM A;  3GTL K;  4KAR A;  1TWF K;  4A3I K;  2E2I A;  1XZQ B;  3S1M C;  4A3G K;  2P5M A;  1KQ4 A;  4WJ3 M;  3PIO S;  3GTM K;  2NVQ K;  2PA8 L;  1WCM C;  3RZD C;  4P9S A;  4OIR A;  2JA5 A;  5L46 A;  3TFJ A;  2E2I C;  2B63 A;  3S1Q K;  4XSX A;  3HOX C;  1XXA A;  1I3Q C;  4PAB A;  4GTB A;  3I4N C;  2B63 C;  1O2F B;  4A3M C;  1XPP A;  4IO9 S;  1PJ7 A;  3S15 C;  1WIH A;  2XCO A;  2JA8 C;  2JA5 K;  4C2M K;  5IP7 C;  4P5B A;  2B63 K;  5HQH A;  2ZUE A;  3HOU K;  1ZVU A;  2NVY A;  3HXA A;  4C45 A;  4GFQ A;  4LR2 A;  4YFK A;  3V4G A;  2E2H A;  4G7Z A;  1WOP A;  4RMF A;  3GTP A;  4C3I C;  1YCL A;  2NVY C;  4Q4Z A;  2JA6 C;  3G4C A;  1EFW A;  4YFN A;  2E2H C;  3DLL S;  3GTQ A;  1WOO A;  3N0B A;  4BLB A;  1SFO K;  3HKZ D;  1WSR A;  2Y0S D;  1BJT A;  3RZO C;  1INN A;  3GTP K;  2PMZ D;  4QIW D;  1HQM A;  4GT9 A;  2E2J C;  5JVG S;  3GTQ K;  3HOY C;  1I6H C;  1I50 C;  4DDQ A;  3AD9 C;  3G4A A;  3S14 C;  1EH1 A;  4A3E K;  4IOC S;  2VUM A;  5TJ3 A;  2A68 A;  4KDD A;  4KMA A;  1O25 A;  2A69 A;  4A3L C;  1O27 A;  4P5A A;  2VUM C;  1TWC A;  4OIN A;  3M3Y C;  4KC6 A;  2R93 A;  4Y52 C;  4A3D C;  5IP9 C;  4A3J K;  5HL8 A;  1TWC C;  2GSU A;  4BLA A;  3S2D K;  1IBA A;  4ZH4 A;  4XLP A;  2R93 C;  3AH5 A;  2KXY A;  2CFA A;  1TWC K;  1VRQ C;  1C0A A;  3A8J A;  1USM A;  1IE0 A;  1VJE A;  3GEE A;  4FM9 A;  2O5J A;  4LQY A;  4BKW A;  4MQ9 A;  3HKZ L;  1EK8 A;  1O28 A;  4Y7N C;  1J6W A;  2Y0S L;  3QX3 A;  3HOW K;  4XCH A;  1Y1W A;  3OPF A;  3S1R K;  4BY1 C;  5C44 K;  3K7A K;  4QIW L;  2BE5 A;  1RU0 A;  1BDF A;  1XXB A;  5IYD K;  3NUH A;  2R92 A;  3A8K A;  1K83 K;  3ADA C;  1Y1W C;  1Y1V A;  4LLG A;  1Y1W K;  4A3F K;  5D4D A;  2R92 C;  3GDZ A;  3MML B;  1Y1V C;  3I4M C;  4QJV A;  5FLM C;  1I3Q A;  3S1M K;  3GTO C;  1G51 A;  3H3V D;  3CQZ A;  4WJ4 A;  4A3K C;  1WCM K;  3RZD K;  2R7Z A;  3AQO A;  1F93 A;  2E2I K;  2YU9 A;  1JOE A;  4G0W A;  1HI9 A;  2GAH C;  3CQZ C;  3WOD A;  2PHC B;  3HOX K;  4J3N A;  5DM7 S;  1I3Q K;  2R7Z C;  3HOZ C;  4AYB D;  3I4N K;  2YU9 C;  5HL7 S;  4A3M K;  4KB4 A;  3CF5 S;  3TFI A;  3S15 K;  3S17 C;  1DCH A;  2JA8 K;  5IP7 K;  2L5N A;  1TWA A;  2YU9 K;  2JH3 A;  2JA6 A;  1F7U A;  4X6A C;  1XZP B;  2KQ1 A;  5IOQ A;  2RGR A;  1J6X A;  2GSN A;  3BP8 C;  4OIQ A;  4G0V A;  1TWA C;  1FEU A;  2WB1 D;  4C3I K;  2KWA A;  2NVY K;  2A6H A;  4BBR C;  2JA6 K;  3HOV C;  2GAG C;  4C3J C;  1IS1 A;  3S0X A;  2E2H K;  1O26 A;  3LAJ A;  2W7V A;  3T00 A;  3IPJ A;  3PO2 C;  3GEH A;  1I50 A;  2NVT C;  4BXX C;  2ZJR S;  1VGX A;  3S1N C;  2CFA B;  4XLN A;  5EGH A;  3HOV K;  4A3C C;  3RZO K;  3GTJ A;  3PO2 K;  2GSO A;  3SZY A;  1JVI A;  4O2D A;  1WQF A;  2NVT K;  3GTG A;  4A3C K;  4G7H A;  3GTJ C;  2E2J K;  3H3V L;  3BUE A;  4XSZ A;  3HOY K;  1VH2 A;  4G0U A;  1I50 K;  1O29 A;  1I6H K;  3GTG C;  4KAT A;  4C3H C;  3GTJ K;  3S14 K;  5E68 A;  5JVO A;  3FKI A;  3ERE D;  3DXJ A;  1UV7 A;  4KMD A;  1DD5 A;  5CJ9 A;  3A8I A;  4WFB S;  4A3L K;  1R9T C;  4AYB L;  1GE9 A;  2CW0 A;  3LAP A;  4WFA S;  5IYB C;  4OIO A;  4FZB A;  2VUM K;  5IYC C;  3AQP A;  5M5W K;  3FKI C;  3SZZ A;  3M3Y K;  5TMC A;  3GSI A;  4A3D K;  4Y52 K;  5IOT A;  5IP9 K;  4GTA A;  3GEI A;  4LK0 A;  5M5X K;  1VLO A;  4BBS C;  5C3E C;  5C4J C;  2P8T A;  2R93 K;  2WB1 L;  4MEY A;  4A93 C;  4AH6 A;  3M4O C;  4KM8 A;  3T02 A;  2L3U A;  1ZYR A;  1XXC A;  3N3Y A;  3TTG A;  2PPB A;  1JQW A;  4Y7N K;  3Q3Q A;  1YX2 A;  4A3B C;  1TWG A;  4BY1 K;  3GTK A;  2NVX C;  4LJZ A;  1TWH A;  1TWG C;  4KAW X;  3FOF A;  1WQG A;  2ZUF A;  3GTO A;  1X31 C;  3GTK C;  1V5V A;  4GTE A;  1YNN A;  4GTD A;  1TWH C;  1I6V A;  3GTL A;  4ILD A;  5IOS A;  3CAG A;  2R92 K;  4YG2 A;  1Y1V K;  3I4M K;  1IL2 A;  3OEP A;  5IOR A;  1TWH K;  5FLM K;  1IW7 A;  3GTM A;  4G7O A;  3GTL C;  4PAA A;  3GTO K;  1TWF C;  2FQT A;  5JFE A;  4A3I C;  3FOE A;  4A3G C;  1WOR A;  4A3K K;  4WIL A;  2V6U A;  3GTM C;  2NVQ C;  5M3M K;  2JA7 A;  4M1X A;  1IQ0 A;  5CHP A;  3S1Q C;  3CQZ K;  1ZXO A;  5DM6 S;  2R7Z K;  1ISE A;  2JA7 C;  3HOZ K;  2KPU A;  1O2B A;  4LK1 A;  2A6E A;  3S17 K;  2JA7 K;  2JA5 C;  4X6A K;  4C2M C;  4GTC A;  2EBB A;  3HOU C;  4KM9 A;  4KB2 A;  4WCE S;  1F9N A;  1TWA K;  3N0C A;  1B4B A;  4OIP A;  3BP3 A;  1USO A;  2O5I A;  4BBR K;  1SFO A;  4C3J K;  1WSV A;  3ORE A;  4BXX K;  1DCP A;  3S1N K;  2ZFZ A;  1XZQ A;  5M3F K;  1EQR A;  4IOA S;  3JST A;  2XCQ A;  1SFO C;  3FHZ A;  4KN7 A;  3GTP C;  3VA7 A;  2Y3P A;  1L0W A;  4KMU A;  1PJ6 A;  3EQL A;  2XCR B;  1R9T A;  3GTG K;  3GTQ C;  4C3H K;  4KAS A;  1J6V A;  1BS2 A;  1O24 A;  4GZY A;  1YNJ A;  4A3E C;  2FQO A;  5JVH S;  2WAQ D;  1WOS A;  2RH6 A;  1R9T K;  3LYW A;  4QJV B;  4LOW A;  4WFN S;  5IYB K;  5FJ8 K;  4KMH A;  5IYC K;  4BY7 C;  3T01 A;  5M5Y K;  4NOI A;  3FKI K;  3GIR A;  1F7V A;  2PA8 D;  1XZP A;  2ZJP S;  4BY7 K;  5C4X C;  1EI6 A;  5TMF A;  1ZQ1 C;  4WF9 S;  1AB4 A;  4BBS K;  4A3J C;  1ZBS A;  5C3E K;  5C4X K;  5C4J K;  3AD8 C;  3S2D C;  3AD7 C;  4GTL A;  2NVX A;  3H0G A;  4A93 K;  3S16 C;  1PJ5 A;  3M4O K;  1O2A A;  1B4A A;  3S16 K;  1SMY A;  3H0G C;  2V6T A;  1BGW A;  4YFX A;  4A3B K;  4GTF A; 
#chains in the Genus database with same CATH homology
 3HOV C;  3HOW C;  3H0G K;  4C3J C;  2NVX K;  2E2H K;  3PO3 C;  3S1Q C;  3S1R C;  3CQZ K;  5C44 C;  3PO2 C;  4KN4 A;  2VUM C;  2NVT C;  4BXX C;  3K7A C;  3S1N C;  3HOV K;  4XLN A;  2R7Z K;  4OIN A;  3M3Y C;  2JA7 C;  1TWG K;  4A3C C;  5IYD C;  3HOZ K;  3S2H C;  3RZO K;  3PO3 K;  3GTK K;  3PO2 K;  1K83 C;  2PMZ L;  4LK1 A;  2NVT K;  2A6E A;  4Y52 C;  4A3D C;  3S17 K;  5IP9 C;  2JA7 K;  4JK1 A;  4A3J K;  4A3C K;  3S2H K;  1TWC C;  4G7H A;  2JA5 C;  3S2D K;  4C2M C;  4X6A K;  4ZH4 A;  4A3F C;  4MEX A;  4XLP A;  3GTJ C;  4Q5S A;  2R93 C;  2E2J K;  3H3V L;  4XSZ A;  3HOY K;  1I6H K;  1I50 K;  2WAQ L;  3HOU C;  1TWC K;  3GTG C;  3GTL K;  1TWF K;  3GTJ K;  4C3H C;  1TWA K;  4A3I K;  3S14 K;  4OIP A;  3S1M C;  4A3G K;  2O5I A;  2O5J A;  4MQ9 A;  4BBR K;  2NVQ K;  3GTM K;  3DXJ A;  2PA8 L;  3HKZ L;  1WCM C;  4Y7N C;  3RZD C;  2Y0S L;  1R9T C;  4A3L K;  4OIR A;  4AYB L;  4C3J K;  2CW0 A;  3HOW K;  2E2I C;  3S1Q K;  3S1R K;  4XSX A;  4BY1 C;  5C44 K;  5IYB C;  4OIO A;  2VUM K;  5IYC C;  5M5W K;  3HOX C;  3K7A K;  4QIW L;  5M3F K;  2BE5 A;  3S1N K;  4BXX K;  3FKI C;  1BDF A;  3M3Y K;  4BBS K;  5IYD K;  1I3Q C;  1SFO C;  5TMC A;  1K83 K;  1Y1W C;  3I4N C;  4LLG A;  2B63 C;  4KN7 A;  3GTP C;  4A3M C;  4A3D K;  4Y52 K;  1XPP A;  5IP9 K;  4LK0 A;  3S15 C;  4KMU A;  5M5X K;  3EQL A;  2JA8 C;  2JA5 K;  4BBS C;  4C2M K;  5IP7 C;  1Y1W K;  5C3E C;  5D4D A;  5C4J C;  4A3F K;  2B63 K;  2R93 K;  2R92 C;  2WB1 L;  1Y1V C;  4MEY A;  3HOU K;  3I4M C;  3GTG K;  4QJV A;  3GTQ C;  4A93 C;  5FLM C;  3M4O C;  4C3H K;  3S1M K;  3GTO C;  4GZY A;  4YFK A;  1ZYR A;  1YNJ A;  4G7Z A;  3H3V D;  4A3E C;  2PPB A;  2WAQ D;  4C3I C;  4A3K C;  1WCM K;  4Y7N K;  2NVY C;  3RZD K;  4Q4Z A;  1R9T K;  4A3B C;  2JA6 C;  2E2I K;  4QJV B;  4BY1 K;  5IYB K;  2NVX C;  5FJ8 K;  4LJZ A;  4YFN A;  2E2H C;  5IYC K;  3CQZ C;  3WOD A;  4BY7 C;  3HOX K;  5M5Y K;  4NOI A;  3FKI K;  1I3Q K;  2PA8 D;  3HKZ D;  1SFO K;  2R7Z C;  2Y0S D;  1TWG C;  4AYB D;  3HOZ C;  3RZO C;  3I4N K;  2YU9 C;  5C4X C;  4A3M K;  3GTP K;  3GTK C;  4BY7 K;  5TMF A;  3S15 K;  2PMZ D;  3S17 C;  1YNN A;  4QIW D;  2JA8 K;  1TWH C;  1I6V A;  1HQM A;  4A3J C;  5C3E K;  5C4X K;  5IP7 K;  5C4J K;  2YU9 K;  2R92 K;  4X6A C;  4YG2 A;  3S2D C;  1Y1V K;  3I4M K;  2E2J C;  3GTQ K;  4A93 K;  3S16 C;  1TWH K;  5FLM K;  3HOY C;  1IW7 A;  1I50 C;  1I6H C;  3M4O K;  4G7O A;  4OIQ A;  3GTL C;  3GTO K;  1TWF C;  1TWA C;  4A3I C;  3S14 C;  3S16 K;  4A3E K;  1SMY A;  2WB1 D;  3H0G C;  4A3G C;  4C3I K;  4A3K K;  2A68 A;  4YFX A;  2NVY K;  2A6H A;  4A3B K;  4BBR C;  2NVQ C;  3GTM C;  5M3M K;  2JA6 K;  2A69 A;  4A3L C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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