4YFNA

Escherichia coli rna polymerase in complex with squaramide compound 14 (n-[3,4-dioxo-2-(4-{[4-(trifluoromethyl)benzyl]amino}piperidin-1-yl)cyclobut-1-en-1-yl]-3,5-dimethyl-1,2-oxazole-4-sulfonamide)
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
235
structure length
235
Chain Sequence
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/transcription inhibitor
source organism Escherichia coli o139:h28 (strain e24377a / etec)
publication title X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase subunit alpha
total genus 38
structure length 235
sequence length 235
chains with identical sequence B, G, H
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2015-02-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4yfnA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4yfnA01
4A3BK 4A3MK 2VUMK 3CQZC 3S1RC 4AYBL 2Y0SD 5IP7C 1TWGC 4MQ9A 4C3JK 4Y52K 4LK1A 1WCMK 4A3EC 4A3FC 4BXXK 3HOUC 3S2DK 2PMZD 1YNJA 3GTQK 4A3KK 3PO3K 5C4XC 2R7ZK 2WB1D 4A3CK 1Y1VC 4QIWL 4Y7NK 1I6VA 3HOXK 4C3HK 2PPBA 2NVTK 3M3YK 1R9TC 3GTGK 1XPPA 1I3QC 3I4NC 5C3EK 3GTOC 5M5WK 4A3BC 3HOYK 4A3MC 2VUMC 5M5XK 2NVYK 1I6HK 4C3JC 4YFKA 4Y52C 3S16K 1WCMC 4X6AK 4A3LK 4BXXC 4Q4ZA 3GTOK 3S2DC 4QIWD 2R92K 4BBSK 1Y1WK 3GTQC 4A3KC 3PO3C 5TMCA 2R7ZC 4A3CC 4Y7NC 3FKIK 3HOXC 2NVTC 2WAQL 4C3HC 1I50K 2JA6K 1HQMA 3M3YC 3M4OK 3GTGC 4A93K 5C3EC 4A3DK 1YNNA 5IP9K 3H0GK 3HOYC 3H3VL 3S17K 1I6HC 2NVYC 3GTLC 2JA5K 3S16C 4X6AC 3GTPK 4A3LC 5IYDK 2A68A 4BBSC 3GTJK 2E2IK 3RZOK 2PA8D 3DXJA 2E2HC 1K83K 3FKIC 4AYBD 1I50C 2JA6C 1TWHK 3HOVK 2JA7K 4ZH4A 4QJVB 4A93C 4A3DC 5IYCK 3S14K 3HOWK 5IP9C 3H0GC 3S17C 2JA5C 3RZDK 2YU9K 2NVXK 1SMYA 3S1QK 3S2HK 3GTPC 4LJZA 5IYDC 4A3JK 3WODA 3GTJC 3HOZK 2E2IC 3GTKK 3RZOC 4NOIA 3HKZL 5IYBK 5FLMK 4A3GK 1K83C 1ZYRA 4KN4A 5TMFA 3HOVC 1TWHC 2R93K 2JA7C 1TWAK 4C3IK 3I4MK 4G7OA 1SFOK 2A6EA 4A3FK 5IYCC 3S14C 4G7ZA 4MEXA 4XLPA 3HOWC 4OINA 4YFXA 4XSXA 2R92C 3RZDC 2BE5A 2WAQD 1Y1WC 2NVXC 2YU9C 3S2HC 3EQLA 3S1QC 3HOUK 4Q5SA 3S15K 5FJ8K 4A3JC 3HOZC 3K7AK 3GTKC 5FLMC 5IYBC 5C4JK 4BY1K 4KMUA 3H3VD 2JA8K 4OIQA 2WB1L 2R93C 4MEYA 1TWAC 4C3IC 3I4MC 1SFOC 4A3EK 2E2JC 4LK0A 2B63K 4A3IK 3GTMK 4OIRA 5C44K 4OIPA 2NVQK 3PO2C 2A6HA 1IW7A 4YG2A 3S15C 5M5YK 4KN7A 4YFNA 4C2MK 3S1MK 3K7AC 1TWFK 5C4JC 4BY1C 2O5IA 4G7HA 4GZYA 4BBRK 2E2JK 1TWCK 1BDFA 3S1NK 2JA8C 4BY7K 4OIOA 3CQZK 3S1RK 5D4DA 4XSZA 5IP7K 1TWGK 4XLNA 2B63C 2A69A 4A3IC 2CW0A 3HKZD 5C44C 4QJVA 3GTMC 2Y0SL 5M3MK 2NVQC 3GTLK 5C4XK 4A3GC 1Y1VK 4LLGA 2O5JA 2PMZL 5M3FK 1R9TK 3PO2K 4C2MC 3S1MC 1I3QK 2E2HK 1TWFC 3I4NK 4JK1A 3M4OC 4BY7C 4BBRC 2PA8L 1TWCC 3S1NC
chains in the Genus database with same CATH superfamily
2KPUA 2NVXA 4A3BK 3CQZC 5IP7C 4Y52K 1WCMK 3GTKA 4A3EC 1WOSA 1J6VA 1BGWA 5C4XC 2R7ZK 1TWAA 1I6VA 1XPPA 1I3QC 4IOCS 5C3EK 1O2FB 4A3BC 3HOYK 5M5XK 2NVYK 4Y52C 4YFKA 1WCMC 1B4AA 3GIRA 3AQOA 2GSNA 2R7ZC 4G0WA 3AD8C 2JA6K 2ZUEA 2B63A 4A93K 5EGHA 5C3EC 1PJ5A 3HOYC 2ZJPS 5E68A 2NVYC 3LYWA 3OREA 3GTJK 1TWCA 2PA8D 3DXJA 2JA6C 3HOVK 4ZH4A 4A93C 4KM8A 3S14K 2XCOA 1PJ6A 2YU9K 1R9TA 3S1QK 3S2HK 1XZQB 4LJZA 4WCES 4A3JK 3GTJC 3HOZK 2VUMA 1O24A 3GEEA 3HOVC 4C3IK 3I4MK 1WSRA 5EGEA 3S14C 4G7ZA 3LAJA 3VA7A 2Y3PA 2BE5A 2YU9C 1Y1WC 3S1QC 3S2HC 4Q5SA 3ADAC 5FJ8K 4A3JC 3HOZC 1TWGA 3K7AK 4GTCA 5C4JK 3TFHA 4OIQA 3TFIA 4C3IC 3I4MC 3DLLS 1XZPA 2V6TA 2E2HA 1HI9A 2GSUA 1XXCA 3GDZA 4KN7A 1EK8A 4C2MK 3S1MK 3K7AC 5C4JC 3A8KA 1XXBA 2E2JK 3S1NK 1O27A 4GTLA 4GTEA 3FHZA 4XSZA 2E2IA 4WFAS 2A69A 3OPFA 2CW0A 3IPJA 2ZJRS 1TWHA 2XCQA 1IL2A 2JA7A 1Y1VK 5M3FK 4C2MC 3S1MC 3I4NK 3GTOK 2E2JC 3S1NC 1XZPB 4G0UA 4KB4A 2JH3A 4C3JK 4MQ9A 4IO9S 4BXXK 3HOUC 3S2DK 2PMZD 4XCHA 5DM7S 1Y1VC 4A3CK 1SFOA 4C3HK 3GTGK 5JVOA 1VGXA 3I4NC 3GEHA 3GTOC 1G51A 2FQTA 3QX3A 1J98A 4C3JC 3S16K 5IOSA 2D6FC 5IOQA 4BXXC 4Q4ZA 3S2DC 4QIWD 2R92K 4WJ4A 4A3CC 2WAQL 1O2AA 4C3HC 3GTGC 5HL7S 4PABA 3GTLC 3S16C 1C0AA 5IYDK 1TWFA 2V6SA 2A68A 1K83K 4BLAA 3CQZA 1ZQ1C 4KMDA 2KWAA 3MMLB 3BUEA 4QJVB 4KC6A 5IYCK 4WFNS 1SMYA 1I3QA 5IYDC 3CF5S 2CFAA 1YX2A 3LAPA 3HKZL 1DCPA 1K83C 4DDQA 1WCMA 2R93K 3N0BA 4G7OA 1V5VA 3L4KA 5IYCC 5HQHA 4XLPA 4YFXA 5CHPA 1O25A 2WAQD 3S15K 4KMHA 3CAGA 1F7UA 4G0VA 2NVYA 1EFWA 4GTFA 1BS2A 2WB1L 2R93C 1O28A 4MEYA 3AH5A 2RH6A 1O26A 4A3IK 3GTMK 1F93A 1DCHA 3G4AA 4OIPA 2JA6A 1IW7A 3S15C 4KASA 1WORA 2KXYA 3AD9C 5L46A 4OIOA 2XCRB 4LQYA 4AH6A 1TWGK 1O29A 3GTJA 4A3IC 3HKZD 3GTMC 4M1XA 1ZBSA 1IQ0A 2PMZL 4P9SA 2E2HK 3OEPA 1JQWA 1EI6A 4WF9S 2YU9A 1Y1WA 4A3MK 1WQGA 3BP8C 2GAGC 4AYBL 1TWGC 4LK1A 3TFJA 1INNA 2FQOA 3GTQK 3TTGA 2WB1D 4QIWL 3HOXK 1F9NA 2PPBA 3M3YK 1IBAA 2GSOA 4KAWX 5M5WK 3HXAA 4A3MC 1I6HK 4X6AK 1ISEA 3ERED 3GTQC 3FKIK 3HOXC 3S0XA 1I50K 1HQMA 3M3YC 1IE0A 4C45A 4KB2A 1EH1A 1JOEA 1YNNA 3H0GK 1UV7A 3H3VL 1I6HC 2JA5K 4KDDA 4X6AC 1L0WA 3GTPK 3NUHA 4GTAA 2L3UA 3RZOK 2ZJQS 4J3NA 2W7VA 4RMFA 3FKIC 4AYBD 1I50C 3A8JA 2KQ1A 3FOFA 5DM6S 1JVIA 3H0GC 2L5NA 1Y1VA 2JA5C 2NVXK 4BLBA 3GTPC 4KATA 2P8TA 3GTOA 3GTKK 3RZOC 4NOIA 1WOOA 3GSIA 4GTBA 5FLMK 4A3GK 4KN4A 5TMFA 1WQFA 1VLOA 1TWAK 4MEXA 1EQRA 4OINA 1PJ7A 2R92C 3PO2K 2NVXC 3SZYA 3GTGA 3EQLA 3L4JA 5CJ9A 3GTKC 5FLMC 4BY1K 3H3VD 3GTLA 3A8IA 2JA8K 1WIHA 1TWAC 4U67S 4LK0A 2B63K 2ZUFA 5C44K 4FM9A 1DD5A 3PO2C 2A6HA 4P5AA 1IS1A 2P5MA 3PIPS 4BY1C 3T00A 4G7HA 4BBRK 3M4OK 1TWCK 2JA8C 3S1RK 5D4DA 2R7ZA 3JSTA 4XLNA 2B63C 4A3FK 5M3MK 3N0CA 1K83A 5C44C 5IORA 1DCOA 3T01A 4LLGA 2O5JA 1R9TK 3SZZA 1XZQA 4JK1A 3M4OC 4WILA 4BBRC 1GE9A 1TWCC 2VUMK 3S1RC 2CFAB 2Y0SD 4A3FC 1YNJA 1USOA 1F7VA 1USMA 4A3KK 3PO3K 2R93A 4Y7NK 2NVTK 1R9TC 2VUMC 4PAAA 1BJTA 1ZXOA 2GAHC 4KM9A 4A3LK 4BBSK 1Y1WK 1VJEA 4A3KC 3PO3C 5TMCA 3N3YA 4Y7NC 4IOAS 2NVTC 2PHCB 1KQ4A 1WQHA 1AB4A 3GTMA 3FOEA 4A3DK 2RGRA 2ZFZA 5IP9K 3S17K 1RU0A 4A3LC 4BBSC 1B4BA 1XXAA 2E2IK 1ZVUA 2E2HC 4LR2A 5IOTA 5JFEA 1VRQC 1TWHK 2JA7K 4GFQA 4GT9A 4KMAA 4A3DC 3HOWK 5IP9C 3LPXA 3S17C 3RZDK 4KARA 1J6XA 1YCLA 2EBBA 5JVHS 1X31C 3WODA 2E2IC 3AQPA 5IYBK 3BP3A 1ZYRA 4BKWA 1TWHC 5HL8A 2JA7C 4O2DA 1SFOK 2A6EA 4P5BA 1WOPA 3HOWC 4LOWA 3GTQA 2V6UA 4XSXA 3RZDC 3HOUK 3GEIA 1WSVA 3AD7C 5IYBC 4KMUA 1SFOC 3PIOS 5JVGS 4ILDA 4OIRA 5TJ3A 3FKIA 2NVQK 1I50A 4YG2A 5M5YK 1VH2A 4YFNA 4WFBS 3V4GA 1O2BA 3H0GA 1TWFK 2O5IA 4BY7K 4GZYA 2JA5A 1BDFA 4WJ3M 1FEUA 3Q3QA 3GTPA 3CQZK 3T02A 5IP7K 4GTDA 4A3EK 3GTLK 2Y0SL 4QJVA 2NVQC 5C4XK 4A3GC 1J6WA 3G4CA 1I3QK 1TWFC 4FZBA 4BY7C 2PA8L 2R92A
chains in the Genus database with same CATH topology
4A3BK 4A3MK 2VUMK 3CQZC 3S1RC 4AYBL 2Y0SD 5IP7C 1TWGC 4MQ9A 4C3JK 4Y52K 4LK1A 1WCMK 4A3EC 4A3FC 4BXXK 3HOUC 3S2DK 2PMZD 1YNJA 3GTQK 4A3KK 3PO3K 5C4XC 2R7ZK 2WB1D 4A3CK 1Y1VC 4QIWL 4Y7NK 1I6VA 3HOXK 4C3HK 2PPBA 2NVTK 3M3YK 1R9TC 3GTGK 1XPPA 1I3QC 3I4NC 5C3EK 3GTOC 5M5WK 4A3BC 3HOYK 4A3MC 2VUMC 5M5XK 2NVYK 1I6HK 4C3JC 4YFKA 4Y52C 3S16K 1WCMC 4X6AK 4A3LK 4BXXC 4Q4ZA 3GTOK 3S2DC 4QIWD 2R92K 4BBSK 1Y1WK 3GTQC 4A3KC 3PO3C 5TMCA 2R7ZC 4A3CC 4Y7NC 3FKIK 3HOXC 2NVTC 2WAQL 4C3HC 1I50K 2JA6K 1HQMA 3M3YC 3M4OK 3GTGC 4A93K 5C3EC 4A3DK 1YNNA 5IP9K 3H0GK 3HOYC 3H3VL 3S17K 1I6HC 2NVYC 3GTLC 2JA5K 3S16C 4X6AC 3GTPK 4A3LC 5IYDK 2A68A 4BBSC 3GTJK 2E2IK 3RZOK 2PA8D 3DXJA 2E2HC 1K83K 3FKIC 4AYBD 1I50C 2JA6C 1TWHK 3HOVK 2JA7K 4ZH4A 4QJVB 4A93C 4A3DC 5IYCK 3S14K 3HOWK 5IP9C 3H0GC 3S17C 2JA5C 3RZDK 2YU9K 2NVXK 1SMYA 3S1QK 3S2HK 3GTPC 4LJZA 5IYDC 4A3JK 3WODA 3GTJC 3HOZK 2E2IC 3GTKK 3RZOC 4NOIA 3HKZL 5IYBK 5FLMK 4A3GK 1K83C 1ZYRA 4KN4A 5TMFA 3HOVC 1TWHC 2R93K 2JA7C 1TWAK 4C3IK 3I4MK 4G7OA 1SFOK 2A6EA 4A3FK 5IYCC 3S14C 4G7ZA 4MEXA 4XLPA 3HOWC 4OINA 4YFXA 4XSXA 2R92C 3RZDC 2BE5A 2WAQD 1Y1WC 2NVXC 2YU9C 3S2HC 3EQLA 3S1QC 3HOUK 4Q5SA 3S15K 5FJ8K 4A3JC 3HOZC 3K7AK 3GTKC 5FLMC 5IYBC 5C4JK 4BY1K 4KMUA 3H3VD 2JA8K 4OIQA 2WB1L 2R93C 4MEYA 1TWAC 4C3IC 3I4MC 1SFOC 4A3EK 2E2JC 4LK0A 2B63K 4A3IK 3GTMK 4OIRA 5C44K 4OIPA 2NVQK 3PO2C 2A6HA 1IW7A 4YG2A 3S15C 5M5YK 4KN7A 4YFNA 4C2MK 3S1MK 3K7AC 1TWFK 5C4JC 4BY1C 2O5IA 4G7HA 4GZYA 4BBRK 2E2JK 1TWCK 1BDFA 3S1NK 2JA8C 4BY7K 4OIOA 3CQZK 3S1RK 5D4DA 4XSZA 5IP7K 1TWGK 4XLNA 2B63C 2A69A 4A3IC 2CW0A 3HKZD 5C44C 4QJVA 3GTMC 2Y0SL 5M3MK 2NVQC 3GTLK 5C4XK 4A3GC 1Y1VK 4LLGA 2O5JA 2PMZL 5M3FK 1R9TK 3PO2K 4C2MC 3S1MC 1I3QK 2E2HK 1TWFC 3I4NK 4JK1A 3M4OC 4BY7C 4BBRC 2PA8L 1TWCC 3S1NC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3B K;  4A3M K;  2VUM K;  3CQZ C;  3S1R C;  4AYB L;  2Y0S D;  5IP7 C;  1TWG C;  4MQ9 A;  4C3J K;  4Y52 K;  4LK1 A;  1WCM K;  4A3E C;  4A3F C;  4BXX K;  3HOU C;  3S2D K;  2PMZ D;  1YNJ A;  3GTQ K;  4A3K K;  3PO3 K;  5C4X C;  2R7Z K;  2WB1 D;  4A3C K;  1Y1V C;  4QIW L;  4Y7N K;  1I6V A;  3HOX K;  4C3H K;  2PPB A;  2NVT K;  3M3Y K;  1R9T C;  3GTG K;  1XPP A;  1I3Q C;  3I4N C;  5C3E K;  3GTO C;  5M5W K;  4A3B C;  3HOY K;  4A3M C;  2VUM C;  5M5X K;  2NVY K;  1I6H K;  4C3J C;  4YFK A;  4Y52 C;  3S16 K;  1WCM C;  4X6A K;  4A3L K;  4BXX C;  4Q4Z A;  3GTO K;  3S2D C;  4QIW D;  2R92 K;  4BBS K;  1Y1W K;  3GTQ C;  4A3K C;  3PO3 C;  5TMC A;  2R7Z C;  4A3C C;  4Y7N C;  3FKI K;  3HOX C;  2NVT C;  2WAQ L;  4C3H C;  1I50 K;  2JA6 K;  1HQM A;  3M3Y C;  3M4O K;  3GTG C;  4A93 K;  5C3E C;  4A3D K;  1YNN A;  5IP9 K;  3H0G K;  3HOY C;  3H3V L;  3S17 K;  1I6H C;  2NVY C;  3GTL C;  2JA5 K;  3S16 C;  4X6A C;  3GTP K;  4A3L C;  5IYD K;  2A68 A;  4BBS C;  3GTJ K;  2E2I K;  3RZO K;  2PA8 D;  3DXJ A;  2E2H C;  1K83 K;  3FKI C;  4AYB D;  1I50 C;  2JA6 C;  1TWH K;  3HOV K;  2JA7 K;  4ZH4 A;  4QJV B;  4A93 C;  4A3D C;  5IYC K;  3S14 K;  3HOW K;  5IP9 C;  3H0G C;  3S17 C;  2JA5 C;  3RZD K;  2YU9 K;  2NVX K;  1SMY A;  3S1Q K;  3S2H K;  3GTP C;  4LJZ A;  5IYD C;  4A3J K;  3WOD A;  3GTJ C;  3HOZ K;  2E2I C;  3GTK K;  3RZO C;  4NOI A;  3HKZ L;  5IYB K;  5FLM K;  4A3G K;  1K83 C;  1ZYR A;  4KN4 A;  5TMF A;  3HOV C;  1TWH C;  2R93 K;  2JA7 C;  1TWA K;  4C3I K;  3I4M K;  4G7O A;  1SFO K;  2A6E A;  4A3F K;  5IYC C;  3S14 C;  4G7Z A;  4MEX A;  4XLP A;  3HOW C;  4OIN A;  4YFX A;  4XSX A;  2R92 C;  3RZD C;  2BE5 A;  2WAQ D;  1Y1W C;  2NVX C;  2YU9 C;  3S2H C;  3EQL A;  3S1Q C;  3HOU K;  4Q5S A;  3S15 K;  5FJ8 K;  4A3J C;  3HOZ C;  3K7A K;  3GTK C;  5FLM C;  5IYB C;  5C4J K;  4BY1 K;  4KMU A;  3H3V D;  2JA8 K;  4OIQ A;  2WB1 L;  2R93 C;  4MEY A;  1TWA C;  4C3I C;  3I4M C;  1SFO C;  4A3E K;  2E2J C;  4LK0 A;  2B63 K;  4A3I K;  3GTM K;  4OIR A;  5C44 K;  4OIP A;  2NVQ K;  3PO2 C;  2A6H A;  1IW7 A;  4YG2 A;  3S15 C;  5M5Y K;  4KN7 A;  4YFN A;  4C2M K;  3S1M K;  3K7A C;  1TWF K;  5C4J C;  4BY1 C;  2O5I A;  4G7H A;  4GZY A;  4BBR K;  2E2J K;  1TWC K;  1BDF A;  3S1N K;  2JA8 C;  4BY7 K;  4OIO A;  3CQZ K;  3S1R K;  5D4D A;  4XSZ A;  5IP7 K;  1TWG K;  4XLN A;  2B63 C;  2A69 A;  4A3I C;  2CW0 A;  3HKZ D;  5C44 C;  4QJV A;  3GTM C;  2Y0S L;  5M3M K;  2NVQ C;  3GTL K;  5C4X K;  4A3G C;  1Y1V K;  4LLG A;  2O5J A;  2PMZ L;  5M3F K;  1R9T K;  3PO2 K;  4C2M C;  3S1M C;  1I3Q K;  2E2H K;  1TWF C;  3I4N K;  4JK1 A;  3M4O C;  4BY7 C;  4BBR C;  2PA8 L;  1TWC C;  3S1N C; 
#chains in the Genus database with same CATH topology
 2KPU A;  2NVX A;  4A3B K;  3CQZ C;  5IP7 C;  4Y52 K;  1WCM K;  3GTK A;  4A3E C;  1WOS A;  1J6V A;  1BGW A;  5C4X C;  2R7Z K;  1TWA A;  1I6V A;  1XPP A;  1I3Q C;  4IOC S;  5C3E K;  1O2F B;  4A3B C;  3HOY K;  5M5X K;  2NVY K;  4Y52 C;  4YFK A;  1WCM C;  1B4A A;  3GIR A;  3AQO A;  2GSN A;  2R7Z C;  4G0W A;  3AD8 C;  2JA6 K;  2ZUE A;  2B63 A;  4A93 K;  5EGH A;  5C3E C;  1PJ5 A;  3HOY C;  2ZJP S;  5E68 A;  2NVY C;  3LYW A;  3ORE A;  3GTJ K;  1TWC A;  2PA8 D;  3DXJ A;  2JA6 C;  3HOV K;  4ZH4 A;  4A93 C;  4KM8 A;  3S14 K;  2XCO A;  1PJ6 A;  2YU9 K;  1R9T A;  3S1Q K;  3S2H K;  1XZQ B;  4LJZ A;  4WCE S;  4A3J K;  3GTJ C;  3HOZ K;  2VUM A;  1O24 A;  3GEE A;  3HOV C;  4C3I K;  3I4M K;  1WSR A;  5EGE A;  3S14 C;  4G7Z A;  3LAJ A;  3VA7 A;  2Y3P A;  2BE5 A;  2YU9 C;  1Y1W C;  3S1Q C;  3S2H C;  4Q5S A;  3ADA C;  5FJ8 K;  4A3J C;  3HOZ C;  1TWG A;  3K7A K;  4GTC A;  5C4J K;  3TFH A;  4OIQ A;  3TFI A;  4C3I C;  3I4M C;  3DLL S;  1XZP A;  2V6T A;  2E2H A;  1HI9 A;  2GSU A;  1XXC A;  3GDZ A;  4KN7 A;  1EK8 A;  4C2M K;  3S1M K;  3K7A C;  5C4J C;  3A8K A;  1XXB A;  2E2J K;  3S1N K;  1O27 A;  4GTL A;  4GTE A;  3FHZ A;  4XSZ A;  2E2I A;  4WFA S;  2A69 A;  3OPF A;  2CW0 A;  3IPJ A;  2ZJR S;  1TWH A;  2XCQ A;  1IL2 A;  2JA7 A;  1Y1V K;  5M3F K;  4C2M C;  3S1M C;  3I4N K;  3GTO K;  2E2J C;  3S1N C;  1XZP B;  4G0U A;  4KB4 A;  2JH3 A;  4C3J K;  4MQ9 A;  4IO9 S;  4BXX K;  3HOU C;  3S2D K;  2PMZ D;  4XCH A;  5DM7 S;  1Y1V C;  4A3C K;  1SFO A;  4C3H K;  3GTG K;  5JVO A;  1VGX A;  3I4N C;  3GEH A;  3GTO C;  1G51 A;  2FQT A;  3QX3 A;  1J98 A;  4C3J C;  3S16 K;  5IOS A;  2D6F C;  5IOQ A;  4BXX C;  4Q4Z A;  3S2D C;  4QIW D;  2R92 K;  4WJ4 A;  4A3C C;  2WAQ L;  1O2A A;  4C3H C;  3GTG C;  5HL7 S;  4PAB A;  3GTL C;  3S16 C;  1C0A A;  5IYD K;  1TWF A;  2V6S A;  2A68 A;  1K83 K;  4BLA A;  3CQZ A;  1ZQ1 C;  4KMD A;  2KWA A;  3MML B;  3BUE A;  4QJV B;  4KC6 A;  5IYC K;  4WFN S;  1SMY A;  1I3Q A;  5IYD C;  3CF5 S;  2CFA A;  1YX2 A;  3LAP A;  3HKZ L;  1DCP A;  1K83 C;  4DDQ A;  1WCM A;  2R93 K;  3N0B A;  4G7O A;  1V5V A;  3L4K A;  5IYC C;  5HQH A;  4XLP A;  4YFX A;  5CHP A;  1O25 A;  2WAQ D;  3S15 K;  4KMH A;  3CAG A;  1F7U A;  4G0V A;  2NVY A;  1EFW A;  4GTF A;  1BS2 A;  2WB1 L;  2R93 C;  1O28 A;  4MEY A;  3AH5 A;  2RH6 A;  1O26 A;  4A3I K;  3GTM K;  1F93 A;  1DCH A;  3G4A A;  4OIP A;  2JA6 A;  1IW7 A;  3S15 C;  4KAS A;  1WOR A;  2KXY A;  3AD9 C;  5L46 A;  4OIO A;  2XCR B;  4LQY A;  4AH6 A;  1TWG K;  1O29 A;  3GTJ A;  4A3I C;  3HKZ D;  3GTM C;  4M1X A;  1ZBS A;  1IQ0 A;  2PMZ L;  4P9S A;  2E2H K;  3OEP A;  1JQW A;  1EI6 A;  4WF9 S;  2YU9 A;  1Y1W A;  4A3M K;  1WQG A;  3BP8 C;  2GAG C;  4AYB L;  1TWG C;  4LK1 A;  3TFJ A;  1INN A;  2FQO A;  3GTQ K;  3TTG A;  2WB1 D;  4QIW L;  3HOX K;  1F9N A;  2PPB A;  3M3Y K;  1IBA A;  2GSO A;  4KAW X;  5M5W K;  3HXA A;  4A3M C;  1I6H K;  4X6A K;  1ISE A;  3ERE D;  3GTQ C;  3FKI K;  3HOX C;  3S0X A;  1I50 K;  1HQM A;  3M3Y C;  1IE0 A;  4C45 A;  4KB2 A;  1EH1 A;  1JOE A;  1YNN A;  3H0G K;  1UV7 A;  3H3V L;  1I6H C;  2JA5 K;  4KDD A;  4X6A C;  1L0W A;  3GTP K;  3NUH A;  4GTA A;  2L3U A;  3RZO K;  2ZJQ S;  4J3N A;  2W7V A;  4RMF A;  3FKI C;  4AYB D;  1I50 C;  3A8J A;  2KQ1 A;  3FOF A;  5DM6 S;  1JVI A;  3H0G C;  2L5N A;  1Y1V A;  2JA5 C;  2NVX K;  4BLB A;  3GTP C;  4KAT A;  2P8T A;  3GTO A;  3GTK K;  3RZO C;  4NOI A;  1WOO A;  3GSI A;  4GTB A;  5FLM K;  4A3G K;  4KN4 A;  5TMF A;  1WQF A;  1VLO A;  1TWA K;  4MEX A;  1EQR A;  4OIN A;  1PJ7 A;  2R92 C;  3PO2 K;  2NVX C;  3SZY A;  3GTG A;  3EQL A;  3L4J A;  5CJ9 A;  3GTK C;  5FLM C;  4BY1 K;  3H3V D;  3GTL A;  3A8I A;  2JA8 K;  1WIH A;  1TWA C;  4U67 S;  4LK0 A;  2B63 K;  2ZUF A;  5C44 K;  4FM9 A;  1DD5 A;  3PO2 C;  2A6H A;  4P5A A;  1IS1 A;  2P5M A;  3PIP S;  4BY1 C;  3T00 A;  4G7H A;  4BBR K;  3M4O K;  1TWC K;  2JA8 C;  3S1R K;  5D4D A;  2R7Z A;  3JST A;  4XLN A;  2B63 C;  4A3F K;  5M3M K;  3N0C A;  1K83 A;  5C44 C;  5IOR A;  1DCO A;  3T01 A;  4LLG A;  2O5J A;  1R9T K;  3SZZ A;  1XZQ A;  4JK1 A;  3M4O C;  4WIL A;  4BBR C;  1GE9 A;  1TWC C;  2VUM K;  3S1R C;  2CFA B;  2Y0S D;  4A3F C;  1YNJ A;  1USO A;  1F7V A;  1USM A;  4A3K K;  3PO3 K;  2R93 A;  4Y7N K;  2NVT K;  1R9T C;  2VUM C;  4PAA A;  1BJT A;  1ZXO A;  2GAH C;  4KM9 A;  4A3L K;  4BBS K;  1Y1W K;  1VJE A;  4A3K C;  3PO3 C;  5TMC A;  3N3Y A;  4Y7N C;  4IOA S;  2NVT C;  2PHC B;  1KQ4 A;  1WQH A;  1AB4 A;  3GTM A;  3FOE A;  4A3D K;  2RGR A;  2ZFZ A;  5IP9 K;  3S17 K;  1RU0 A;  4A3L C;  4BBS C;  1B4B A;  1XXA A;  2E2I K;  1ZVU A;  2E2H C;  4LR2 A;  5IOT A;  5JFE A;  1VRQ C;  1TWH K;  2JA7 K;  4GFQ A;  4GT9 A;  4KMA A;  4A3D C;  3HOW K;  5IP9 C;  3LPX A;  3S17 C;  3RZD K;  4KAR A;  1J6X A;  1YCL A;  2EBB A;  5JVH S;  1X31 C;  3WOD A;  2E2I C;  3AQP A;  5IYB K;  3BP3 A;  1ZYR A;  4BKW A;  1TWH C;  5HL8 A;  2JA7 C;  4O2D A;  1SFO K;  2A6E A;  4P5B A;  1WOP A;  3HOW C;  4LOW A;  3GTQ A;  2V6U A;  4XSX A;  3RZD C;  3HOU K;  3GEI A;  1WSV A;  3AD7 C;  5IYB C;  4KMU A;  1SFO C;  3PIO S;  5JVG S;  4ILD A;  4OIR A;  5TJ3 A;  3FKI A;  2NVQ K;  1I50 A;  4YG2 A;  5M5Y K;  1VH2 A;  4YFN A;  4WFB S;  3V4G A;  1O2B A;  3H0G A;  1TWF K;  2O5I A;  4BY7 K;  4GZY A;  2JA5 A;  1BDF A;  4WJ3 M;  1FEU A;  3Q3Q A;  3GTP A;  3CQZ K;  3T02 A;  5IP7 K;  4GTD A;  4A3E K;  3GTL K;  2Y0S L;  4QJV A;  2NVQ C;  5C4X K;  4A3G C;  1J6W A;  3G4C A;  1I3Q K;  1TWF C;  4FZB A;  4BY7 C;  2PA8 L;  2R92 A; 
#chains in the Genus database with same CATH homology
 4A3B K;  4A3M K;  2VUM K;  3CQZ C;  3S1R C;  4AYB L;  2Y0S D;  5IP7 C;  1TWG C;  4MQ9 A;  4C3J K;  4Y52 K;  4LK1 A;  1WCM K;  4A3E C;  4A3F C;  4BXX K;  3HOU C;  3S2D K;  2PMZ D;  1YNJ A;  3GTQ K;  4A3K K;  3PO3 K;  5C4X C;  2R7Z K;  2WB1 D;  4A3C K;  1Y1V C;  4QIW L;  4Y7N K;  1I6V A;  3HOX K;  4C3H K;  2PPB A;  2NVT K;  3M3Y K;  1R9T C;  3GTG K;  1XPP A;  1I3Q C;  3I4N C;  5C3E K;  3GTO C;  5M5W K;  4A3B C;  3HOY K;  4A3M C;  2VUM C;  5M5X K;  2NVY K;  1I6H K;  4C3J C;  4YFK A;  4Y52 C;  3S16 K;  1WCM C;  4X6A K;  4A3L K;  4BXX C;  4Q4Z A;  3GTO K;  3S2D C;  4QIW D;  2R92 K;  4BBS K;  1Y1W K;  3GTQ C;  4A3K C;  3PO3 C;  5TMC A;  2R7Z C;  4A3C C;  4Y7N C;  3FKI K;  3HOX C;  2NVT C;  2WAQ L;  4C3H C;  1I50 K;  2JA6 K;  1HQM A;  3M3Y C;  3M4O K;  3GTG C;  4A93 K;  5C3E C;  4A3D K;  1YNN A;  5IP9 K;  3H0G K;  3HOY C;  3H3V L;  3S17 K;  1I6H C;  2NVY C;  3GTL C;  2JA5 K;  3S16 C;  4X6A C;  3GTP K;  4A3L C;  5IYD K;  2A68 A;  4BBS C;  3GTJ K;  2E2I K;  3RZO K;  2PA8 D;  3DXJ A;  2E2H C;  1K83 K;  3FKI C;  4AYB D;  1I50 C;  2JA6 C;  1TWH K;  3HOV K;  2JA7 K;  4ZH4 A;  4QJV B;  4A93 C;  4A3D C;  5IYC K;  3S14 K;  3HOW K;  5IP9 C;  3H0G C;  3S17 C;  2JA5 C;  3RZD K;  2YU9 K;  2NVX K;  1SMY A;  3S1Q K;  3S2H K;  3GTP C;  4LJZ A;  5IYD C;  4A3J K;  3WOD A;  3GTJ C;  3HOZ K;  2E2I C;  3GTK K;  3RZO C;  4NOI A;  3HKZ L;  5IYB K;  5FLM K;  4A3G K;  1K83 C;  1ZYR A;  4KN4 A;  5TMF A;  3HOV C;  1TWH C;  2R93 K;  2JA7 C;  1TWA K;  4C3I K;  3I4M K;  4G7O A;  1SFO K;  2A6E A;  4A3F K;  5IYC C;  3S14 C;  4G7Z A;  4MEX A;  4XLP A;  3HOW C;  4OIN A;  4YFX A;  4XSX A;  2R92 C;  3RZD C;  2BE5 A;  2WAQ D;  1Y1W C;  2NVX C;  2YU9 C;  3S2H C;  3EQL A;  3S1Q C;  3HOU K;  4Q5S A;  3S15 K;  5FJ8 K;  4A3J C;  3HOZ C;  3K7A K;  3GTK C;  5FLM C;  5IYB C;  5C4J K;  4BY1 K;  4KMU A;  3H3V D;  2JA8 K;  4OIQ A;  2WB1 L;  2R93 C;  4MEY A;  1TWA C;  4C3I C;  3I4M C;  1SFO C;  4A3E K;  2E2J C;  4LK0 A;  2B63 K;  4A3I K;  3GTM K;  4OIR A;  5C44 K;  4OIP A;  2NVQ K;  3PO2 C;  2A6H A;  1IW7 A;  4YG2 A;  3S15 C;  5M5Y K;  4KN7 A;  4YFN A;  4C2M K;  3S1M K;  3K7A C;  1TWF K;  5C4J C;  4BY1 C;  2O5I A;  4G7H A;  4GZY A;  4BBR K;  2E2J K;  1TWC K;  1BDF A;  3S1N K;  2JA8 C;  4BY7 K;  4OIO A;  3CQZ K;  3S1R K;  5D4D A;  4XSZ A;  5IP7 K;  1TWG K;  4XLN A;  2B63 C;  2A69 A;  4A3I C;  2CW0 A;  3HKZ D;  5C44 C;  4QJV A;  3GTM C;  2Y0S L;  5M3M K;  2NVQ C;  3GTL K;  5C4X K;  4A3G C;  1Y1V K;  4LLG A;  2O5J A;  2PMZ L;  5M3F K;  1R9T K;  3PO2 K;  4C2M C;  3S1M C;  1I3Q K;  2E2H K;  1TWF C;  3I4N K;  4JK1 A;  3M4O C;  4BY7 C;  4BBR C;  2PA8 L;  1TWC C;  3S1N C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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