4YI7A

Anthranilate bound at active site of anthranilate phosphoribosyl transferase from acinetobacter (anprt; trpd)
Total Genus 122
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
346
structure length
331
Chain Sequence
RANIQQALNHITKNIHLTQAQMEDVMRSIMQGEATEAQIGALMMGLRMKGESIDEITAAARVMRELAIKIDVSDIQYLVDIVGTGGDNLFNVSTASSFVIAAAGATIAKHGNRSSDLLEQAGINLDLDMQQTERCIREMGVGFLFAMKYAVGPRRELGIRSIFNLLGPLTNPAGVKRFVIGVFSDELCRPIAEVMKQLGAEHVMVVHSKDGLDEISLASQTYIAELKNGEVTEWVLNPEDVNIPSQTLSGLIVEDSNASLKLIKDALGRKKSDIGEKAANMIALNAGAGIYVSGLATSYKQGVALAHDIIYGGQALEKMSILSEFTKALKE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords Anthranilate phosphoribosyltransferase
publication title Substrate inhibition of protein in tryptophan biosynthesis pathway redirects flux to aromatic catabolism in Acinetobacter baylyi ADP1.
rcsb
source organism Acinetobacter baylyi (strain atcc 33305 / bd413 / adp1)
total genus 122
structure length 331
sequence length 346
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2015-02-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4yi7A01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4yi7A02
1O17A 4HKMA 5BYTA 5BNEA 4X5EA 4N93A 1OTPA 4YYYA 3TWPA 4X5CA 4OWVA 4IJ1A 3H5QA 4X46A 2BPQA 2WK5A 4N5VA 3QSAA 4ZOKA 2J0FA 1ZYKA 5EP8A 4YEKA 4GKMA 4OWMA 4MUOA 3R88A 4ZOFA 4GIUA 5BO3A 2ELCA 2WK6A 4GA6A 4X59A 4OWSA 2DSJA 2GVQA 4OWUA 4YI7A 4ZTVA 1V8GA 4EAFA 5C7SA 3QR9A 4X5BA 4X58A 4GTNA 1KHDA 1ZXYA 4OWNA 3QQSA 4GA5A 4LHMA 2TPTA 3QS8A 4N8QA 4XR5A 5C2LA 1UOUA 1ZVWA 5BO2A 1AZYA 3GBRA 4X5DA 3R6CA 1VQUA 1KGZA 4GA4A 5C1RA 4X5AA 5EY3A 1BRWA 4OWOA 4OWQA 4EADA 4ZOJA 1GXBA 3UU1A 4M0RA
chains in the Genus database with same CATH superfamily
1O17A 4HKMA 5BYTA 5BNEA 4X5EA 4N93A 1OTPA 4YYYA 4F3FC 3TWPA 4X5CA 4OWVA 4IJ1A 3H5QA 4X46A 2BPQA 2WK5A 4N5VA 3QSAA 4ZOKA 2J0FA 1ZYKA 5EP8A 4YEKA 4GKMA 4OWMA 4MUOA 3R88A 4ZOFA 1RRZA 4GIUA 5BO3A 2ELCA 2WK6A 4GA6A 4X59A 4OWSA 2DSJA 2GVQA 4OWUA 1RF8B 4YI7A 4ZTVA 1V8GA 4EAFA 5C7SA 3QR9A 4X5BA 4X58A 4GTNA 1KHDA 1ZXYA 4OWNA 3QQSA 4GA5A 4LHMA 2TPTA 3QS8A 4N8QA 4XR5A 5C2LA 1UOUA 1ZVWA 5BO2A 1AZYA 3GBRA 4X5DA 3R6CA 1VQUA 1KGZA 4GA4A 5C1RA 4X5AA 5EY3A 1BRWA 4OWOA 4OWQA 4EADA 4ZOJA 1GXBA 3UU1A 4M0RA
chains in the Genus database with same CATH topology
1O17A 4HKMA 5BYTA 5BNEA 4X5EA 4N93A 1OTPA 4YYYA 3TWPA 4X5CA 4OWVA 4IJ1A 3H5QA 4X46A 2BPQA 2WK5A 4N5VA 3QSAA 4ZOKA 2J0FA 1ZYKA 5EP8A 4YEKA 4GKMA 4OWMA 4MUOA 3R88A 4ZOFA 4GIUA 5BO3A 2ELCA 2WK6A 4GA6A 4X59A 4OWSA 2DSJA 2GVQA 4OWUA 4YI7A 4ZTVA 1V8GA 4EAFA 5C7SA 3QR9A 4X5BA 4X58A 4GTNA 1KHDA 1ZXYA 4OWNA 3QQSA 4GA5A 4LHMA 2TPTA 3QS8A 4N8QA 4XR5A 5C2LA 1UOUA 1ZVWA 5BO2A 1AZYA 3GBRA 4X5DA 3R6CA 1VQUA 1KGZA 4GA4A 5C1RA 4X5AA 5EY3A 1BRWA 4OWOA 4OWQA 4EADA 4ZOJA 1GXBA 3UU1A 4M0RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1O17 A;  4HKM A;  5BYT A;  5BNE A;  4X5E A;  4N93 A;  1OTP A;  4YYY A;  3TWP A;  4X5C A;  4OWV A;  4IJ1 A;  3H5Q A;  4X46 A;  2BPQ A;  2WK5 A;  4N5V A;  3QSA A;  4ZOK A;  2J0F A;  1ZYK A;  5EP8 A;  4YEK A;  4GKM A;  4OWM A;  4MUO A;  3R88 A;  4ZOF A;  4GIU A;  5BO3 A;  2ELC A;  2WK6 A;  4GA6 A;  4X59 A;  4OWS A;  2DSJ A;  2GVQ A;  4OWU A;  4YI7 A;  4ZTV A;  1V8G A;  4EAF A;  5C7S A;  3QR9 A;  4X5B A;  4X58 A;  4GTN A;  1KHD A;  1ZXY A;  4OWN A;  3QQS A;  4GA5 A;  4LHM A;  2TPT A;  3QS8 A;  4N8Q A;  4XR5 A;  5C2L A;  1UOU A;  1ZVW A;  5BO2 A;  1AZY A;  3GBR A;  4X5D A;  3R6C A;  1VQU A;  1KGZ A;  4GA4 A;  5C1R A;  4X5A A;  5EY3 A;  1BRW A;  4OWO A;  4OWQ A;  4EAD A;  4ZOJ A;  1GXB A;  3UU1 A;  4M0R A; 
#chains in the Genus database with same CATH topology
 1O17 A;  4HKM A;  5BYT A;  5BNE A;  4X5E A;  4N93 A;  1OTP A;  4YYY A;  4F3F C;  3TWP A;  4X5C A;  4OWV A;  4IJ1 A;  3H5Q A;  4X46 A;  2BPQ A;  2WK5 A;  4N5V A;  3QSA A;  4ZOK A;  2J0F A;  1ZYK A;  5EP8 A;  4YEK A;  4GKM A;  4OWM A;  4MUO A;  3R88 A;  4ZOF A;  1RRZ A;  4GIU A;  5BO3 A;  2ELC A;  2WK6 A;  4GA6 A;  4X59 A;  4OWS A;  2DSJ A;  2GVQ A;  4OWU A;  1RF8 B;  4YI7 A;  4ZTV A;  1V8G A;  4EAF A;  5C7S A;  3QR9 A;  4X5B A;  4X58 A;  4GTN A;  1KHD A;  1ZXY A;  4OWN A;  3QQS A;  4GA5 A;  4LHM A;  2TPT A;  3QS8 A;  4N8Q A;  4XR5 A;  5C2L A;  1UOU A;  1ZVW A;  5BO2 A;  1AZY A;  3GBR A;  4X5D A;  3R6C A;  1VQU A;  1KGZ A;  4GA4 A;  5C1R A;  4X5A A;  5EY3 A;  1BRW A;  4OWO A;  4OWQ A;  4EAD A;  4ZOJ A;  1GXB A;  3UU1 A;  4M0R A; 
#chains in the Genus database with same CATH homology
 1O17 A;  4HKM A;  5BYT A;  5BNE A;  4X5E A;  4N93 A;  1OTP A;  4YYY A;  3TWP A;  4X5C A;  4OWV A;  4IJ1 A;  3H5Q A;  4X46 A;  2BPQ A;  2WK5 A;  4N5V A;  3QSA A;  4ZOK A;  2J0F A;  1ZYK A;  5EP8 A;  4YEK A;  4GKM A;  4OWM A;  4MUO A;  3R88 A;  4ZOF A;  4GIU A;  5BO3 A;  2ELC A;  2WK6 A;  4GA6 A;  4X59 A;  4OWS A;  2DSJ A;  2GVQ A;  4OWU A;  4YI7 A;  4ZTV A;  1V8G A;  4EAF A;  5C7S A;  3QR9 A;  4X5B A;  4X58 A;  4GTN A;  1KHD A;  1ZXY A;  4OWN A;  3QQS A;  4GA5 A;  4LHM A;  2TPT A;  3QS8 A;  4N8Q A;  4XR5 A;  5C2L A;  1UOU A;  1ZVW A;  5BO2 A;  1AZY A;  3GBR A;  4X5D A;  3R6C A;  1VQU A;  1KGZ A;  4GA4 A;  5C1R A;  4X5A A;  5EY3 A;  1BRW A;  4OWO A;  4OWQ A;  4EAD A;  4ZOJ A;  1GXB A;  3UU1 A;  4M0R A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...