4YPAA

Ash1l set domain q2265a mutant in complex with s-adenosyl methionine (sam)
Total Genus 48
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
218
structure length
218
Chain Sequence
GAMAGSYKKIRSNVYVDVKPLSGYEATTCNCKKPDDDTRKGCVDDCLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKAQLCKCGFEKCRGIIG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Histone-lysine N-methyltransferase ASH1L
publication title Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.
pubmed doi rcsb
source organism Homo sapiens
total genus 48
structure length 218
sequence length 218
chains with identical sequence B, C, D
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2015-03-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00856 SET SET domain
A PF17907 AWS AWS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 4ypaA00
4MI0A 3VV0A 5F5EA 1N3JA 4YNMA 3S7BA 1N6CA 5KJNA 5TTFA 5ARFA 1MT6A 3IHXA 5TH7A 1ML9A 3CBMA 3M56A 5KJKA 5KJMA 3OS5A 3M54A 5CCLA 3M59A 4WUYA 3QWVA 1MUFA 5JHNA 4J8OA 1MVHA 5KJLA 2W5ZA 3EP0A 2JV0A 3VUZA 5AYFA 5T0MA 3M57A 4JDSA 5LSXA 3FPDA 3S7DA 3F9WA 3OPEA 4LDGA 5EX0A 5F6LA 4MI5A 4QEOA 2O8JA 1XQHA 2F69A 5F6KC 4YPUA 5TEGA 3MO5A 4J83A 3TG4A 2R3AA 3RIBA 1O9SA 3F9ZA 5F59A 2BQZA 4NJ5A 4JLGA 3HNAA 5EX3A 5HQ8A 3KMAA 2W5YA 5T0KA 4QEPA 1N6AA 3RU0A 3SWCA 5T5GA 3S8PA 3KMTA 3DB5A 5EG2A 4C1QA 3M58A 3RQ4A 3S7FA 3MO0A 3KMJA 5JIYA 4YPAA 3M53A 3RJWA 3DALA 3OXFA 3F9YA 3M5AA 3CBOA 4YNDA 4RZ0A 1H3IA 3MEKA 2IGQA 3S7JA 3PDNA 4IJDA 5LSZA 4BUPA 4O6FA 5ARGA 3F9XA 1MVXA 3QWPA 3BO5A 3N71A 2RFIA 3OXLA 4J7IA 4AU7A 2G46A 3OXGA 3OOIA 3M55A 4E47A 4IJ8A 4YNPA 3QWWA 3MO2A 3CBPA 3RAYA 5CCMA 1ZKKA 1PEGA 4I51A 4O30A 5JJ0A 4FMUA 4Z4PA 4J7FA 4YPEA 5JINA 4H12A 4NVQA 3TG5A 3K5KA 3SW9A 2QPWA 5HI7A 5CPRB 4QENA
chains in the Genus database with same CATH superfamily
4MI0A 3VV0A 5F5EA 1N3JA 4YNMA 3S7BA 1N6CA 5KJNA 5TTFA 5ARFA 1MT6A 3IHXA 5TH7A 1ML9A 3CBMA 3M56A 5KJKA 5KJMA 3OS5A 3M54A 5CCLA 3M59A 4WUYA 3QWVA 1MUFA 5JHNA 4J8OA 1MVHA 5KJLA 2W5ZA 3EP0A 2JV0A 3VUZA 5AYFA 5T0MA 3M57A 4JDSA 5LSXA 3FPDA 3S7DA 3F9WA 3OPEA 4LDGA 5EX0A 5F6LA 4MI5A 4QEOA 2O8JA 1XQHA 2F69A 5F6KC 4YPUA 5TEGA 3MO5A 4J83A 3TG4A 2R3AA 3RIBA 1O9SA 3F9ZA 5F59A 2BQZA 4NJ5A 4JLGA 3HNAA 5EX3A 5HQ8A 3KMAA 2W5YA 5T0KA 4QEPA 1N6AA 3RU0A 3SWCA 5T5GA 3S8PA 3KMTA 3DB5A 5EG2A 4C1QA 3M58A 3RQ4A 3S7FA 3MO0A 3KMJA 5JIYA 4YPAA 3M53A 3RJWA 3DALA 3OXFA 3F9YA 3M5AA 3CBOA 4YNDA 4RZ0A 1H3IA 3MEKA 2IGQA 3S7JA 3PDNA 4IJDA 5LSZA 4BUPA 4O6FA 5ARGA 3F9XA 1MVXA 3QWPA 3BO5A 3N71A 2RFIA 3OXLA 4J7IA 4AU7A 2G46A 3OXGA 3OOIA 3M55A 4E47A 4IJ8A 4YNPA 3QWWA 3MO2A 3CBPA 3RAYA 5CCMA 1ZKKA 1PEGA 4I51A 4O30A 5JJ0A 4FMUA 4Z4PA 4J7FA 4YPEA 5JINA 4H12A 4NVQA 3TG5A 3K5KA 3SW9A 2QPWA 5HI7A 5CPRB 4QENA
chains in the Genus database with same CATH topology
4MI0A 3VV0A 5F5EA 1N3JA 4YNMA 3S7BA 1N6CA 5KJNA 5TTFA 5ARFA 1MT6A 3IHXA 5TH7A 1ML9A 3CBMA 3M56A 5KJKA 5KJMA 3OS5A 3M54A 5CCLA 3M59A 4WUYA 3QWVA 1MUFA 5JHNA 4J8OA 1MVHA 5KJLA 2W5ZA 3EP0A 2JV0A 3VUZA 5AYFA 5T0MA 3M57A 4JDSA 5LSXA 3FPDA 3S7DA 3F9WA 3OPEA 4LDGA 5EX0A 5F6LA 4MI5A 4QEOA 2O8JA 1XQHA 2F69A 5F6KC 4YPUA 5TEGA 3MO5A 4J83A 3TG4A 2R3AA 3RIBA 1O9SA 3F9ZA 5F59A 2BQZA 4NJ5A 4JLGA 3HNAA 5EX3A 5HQ8A 3KMAA 2W5YA 5T0KA 4QEPA 1N6AA 3RU0A 3SWCA 5T5GA 3S8PA 3KMTA 3DB5A 5EG2A 4C1QA 3M58A 3RQ4A 3S7FA 3MO0A 3KMJA 5JIYA 4YPAA 3M53A 3RJWA 3DALA 3OXFA 3F9YA 3M5AA 3CBOA 4YNDA 4RZ0A 1H3IA 3MEKA 2IGQA 3S7JA 3PDNA 4IJDA 5LSZA 4BUPA 4O6FA 5ARGA 3F9XA 1MVXA 3QWPA 3BO5A 3N71A 2RFIA 3OXLA 4J7IA 4AU7A 2G46A 3OXGA 3OOIA 3M55A 4E47A 4IJ8A 4YNPA 3QWWA 3MO2A 3CBPA 3RAYA 5CCMA 1ZKKA 1PEGA 4I51A 4O30A 5JJ0A 4FMUA 4Z4PA 4J7FA 4YPEA 5JINA 4H12A 4NVQA 3TG5A 3K5KA 3SW9A 2QPWA 5HI7A 5CPRB 4QENA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MI0 A;  3VV0 A;  5F5E A;  1N3J A;  4YNM A;  3S7B A;  1N6C A;  5KJN A;  5TTF A;  5ARF A;  1MT6 A;  3IHX A;  5TH7 A;  1ML9 A;  3CBM A;  3M56 A;  5KJK A;  5KJM A;  3OS5 A;  3M54 A;  5CCL A;  3M59 A;  4WUY A;  3QWV A;  1MUF A;  5JHN A;  4J8O A;  1MVH A;  5KJL A;  2W5Z A;  3EP0 A;  2JV0 A;  3VUZ A;  5AYF A;  5T0M A;  3M57 A;  4JDS A;  5LSX A;  3FPD A;  3S7D A;  3F9W A;  3OPE A;  4LDG A;  5EX0 A;  5F6L A;  4MI5 A;  4QEO A;  2O8J A;  1XQH A;  2F69 A;  5F6K C;  4YPU A;  5TEG A;  3MO5 A;  4J83 A;  3TG4 A;  2R3A A;  3RIB A;  1O9S A;  3F9Z A;  5F59 A;  2BQZ A;  4NJ5 A;  4JLG A;  3HNA A;  5EX3 A;  5HQ8 A;  3KMA A;  2W5Y A;  5T0K A;  4QEP A;  1N6A A;  3RU0 A;  3SWC A;  5T5G A;  3S8P A;  3KMT A;  3DB5 A;  5EG2 A;  4C1Q A;  3M58 A;  3RQ4 A;  3S7F A;  3MO0 A;  3KMJ A;  5JIY A;  4YPA A;  3M53 A;  3RJW A;  3DAL A;  3OXF A;  3F9Y A;  3M5A A;  3CBO A;  4YND A;  4RZ0 A;  1H3I A;  3MEK A;  2IGQ A;  3S7J A;  3PDN A;  4IJD A;  5LSZ A;  4BUP A;  4O6F A;  5ARG A;  3F9X A;  1MVX A;  3QWP A;  3BO5 A;  3N71 A;  2RFI A;  3OXL A;  4J7I A;  4AU7 A;  2G46 A;  3OXG A;  3OOI A;  3M55 A;  4E47 A;  4IJ8 A;  4YNP A;  3QWW A;  3MO2 A;  3CBP A;  3RAY A;  5CCM A;  1ZKK A;  1PEG A;  4I51 A;  4O30 A;  5JJ0 A;  4FMU A;  4Z4P A;  4J7F A;  4YPE A;  5JIN A;  4H12 A;  4NVQ A;  3TG5 A;  3K5K A;  3SW9 A;  2QPW A;  5HI7 A;  5CPR B;  4QEN A; 
#chains in the Genus database with same CATH topology
 4MI0 A;  3VV0 A;  5F5E A;  1N3J A;  4YNM A;  3S7B A;  1N6C A;  5KJN A;  5TTF A;  5ARF A;  1MT6 A;  3IHX A;  5TH7 A;  1ML9 A;  3CBM A;  3M56 A;  5KJK A;  5KJM A;  3OS5 A;  3M54 A;  5CCL A;  3M59 A;  4WUY A;  3QWV A;  1MUF A;  5JHN A;  4J8O A;  1MVH A;  5KJL A;  2W5Z A;  3EP0 A;  2JV0 A;  3VUZ A;  5AYF A;  5T0M A;  3M57 A;  4JDS A;  5LSX A;  3FPD A;  3S7D A;  3F9W A;  3OPE A;  4LDG A;  5EX0 A;  5F6L A;  4MI5 A;  4QEO A;  2O8J A;  1XQH A;  2F69 A;  5F6K C;  4YPU A;  5TEG A;  3MO5 A;  4J83 A;  3TG4 A;  2R3A A;  3RIB A;  1O9S A;  3F9Z A;  5F59 A;  2BQZ A;  4NJ5 A;  4JLG A;  3HNA A;  5EX3 A;  5HQ8 A;  3KMA A;  2W5Y A;  5T0K A;  4QEP A;  1N6A A;  3RU0 A;  3SWC A;  5T5G A;  3S8P A;  3KMT A;  3DB5 A;  5EG2 A;  4C1Q A;  3M58 A;  3RQ4 A;  3S7F A;  3MO0 A;  3KMJ A;  5JIY A;  4YPA A;  3M53 A;  3RJW A;  3DAL A;  3OXF A;  3F9Y A;  3M5A A;  3CBO A;  4YND A;  4RZ0 A;  1H3I A;  3MEK A;  2IGQ A;  3S7J A;  3PDN A;  4IJD A;  5LSZ A;  4BUP A;  4O6F A;  5ARG A;  3F9X A;  1MVX A;  3QWP A;  3BO5 A;  3N71 A;  2RFI A;  3OXL A;  4J7I A;  4AU7 A;  2G46 A;  3OXG A;  3OOI A;  3M55 A;  4E47 A;  4IJ8 A;  4YNP A;  3QWW A;  3MO2 A;  3CBP A;  3RAY A;  5CCM A;  1ZKK A;  1PEG A;  4I51 A;  4O30 A;  5JJ0 A;  4FMU A;  4Z4P A;  4J7F A;  4YPE A;  5JIN A;  4H12 A;  4NVQ A;  3TG5 A;  3K5K A;  3SW9 A;  2QPW A;  5HI7 A;  5CPR B;  4QEN A; 
#chains in the Genus database with same CATH homology
 4MI0 A;  3VV0 A;  5F5E A;  1N3J A;  4YNM A;  3S7B A;  1N6C A;  5KJN A;  5TTF A;  5ARF A;  1MT6 A;  3IHX A;  5TH7 A;  1ML9 A;  3CBM A;  3M56 A;  5KJK A;  5KJM A;  3OS5 A;  3M54 A;  5CCL A;  3M59 A;  4WUY A;  3QWV A;  1MUF A;  5JHN A;  4J8O A;  1MVH A;  5KJL A;  2W5Z A;  3EP0 A;  2JV0 A;  3VUZ A;  5AYF A;  5T0M A;  3M57 A;  4JDS A;  5LSX A;  3FPD A;  3S7D A;  3F9W A;  3OPE A;  4LDG A;  5EX0 A;  5F6L A;  4MI5 A;  4QEO A;  2O8J A;  1XQH A;  2F69 A;  5F6K C;  4YPU A;  5TEG A;  3MO5 A;  4J83 A;  3TG4 A;  2R3A A;  3RIB A;  1O9S A;  3F9Z A;  5F59 A;  2BQZ A;  4NJ5 A;  4JLG A;  3HNA A;  5EX3 A;  5HQ8 A;  3KMA A;  2W5Y A;  5T0K A;  4QEP A;  1N6A A;  3RU0 A;  3SWC A;  5T5G A;  3S8P A;  3KMT A;  3DB5 A;  5EG2 A;  4C1Q A;  3M58 A;  3RQ4 A;  3S7F A;  3MO0 A;  3KMJ A;  5JIY A;  4YPA A;  3M53 A;  3RJW A;  3DAL A;  3OXF A;  3F9Y A;  3M5A A;  3CBO A;  4YND A;  4RZ0 A;  1H3I A;  3MEK A;  2IGQ A;  3S7J A;  3PDN A;  4IJD A;  5LSZ A;  4BUP A;  4O6F A;  5ARG A;  3F9X A;  1MVX A;  3QWP A;  3BO5 A;  3N71 A;  2RFI A;  3OXL A;  4J7I A;  4AU7 A;  2G46 A;  3OXG A;  3OOI A;  3M55 A;  4E47 A;  4IJ8 A;  4YNP A;  3QWW A;  3MO2 A;  3CBP A;  3RAY A;  5CCM A;  1ZKK A;  1PEG A;  4I51 A;  4O30 A;  5JJ0 A;  4FMU A;  4Z4P A;  4J7F A;  4YPE A;  5JIN A;  4H12 A;  4NVQ A;  3TG5 A;  3K5K A;  3SW9 A;  2QPW A;  5HI7 A;  5CPR B;  4QEN A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...