4ZHZA

Endonuclease inhibitor bound to influenza strain h1n1 polymerase acidic subunit n-terminal region with expelling one of the metal ions in the active site
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
181
structure length
181
Chain Sequence
GPLGSMEDFVRQCFNPMIVELAEKTMKEYGEDLKIETNKFAAICTHLEVCFMYSDASKHRFEIIEGRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSER
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Polymerase acidic protein
publication title Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit
pubmed doi rcsb
source organism Influenza a virus (strain a/puerto rico/8/1934 h1n1)
total genus 67
structure length 181
sequence length 181
ec nomenclature
pdb deposition date 2015-04-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.91.90 Alpha Beta 3-Layer(aba) Sandwich Restriction Endonuclease Restriction Endonuclease 4zhzA00
5D2OA 5FDGA 5DBSA 4YYLA 5D9JA 5D4GA 5D8UA 5I13A 4AVQA 4E5LA 5DESA 4E5HA 5CCYA 5JHVA 4E5IA 4E5GA 3HW5A 4CGXA 3HW6A 4E5FA 4ZHZA 5DEBA 5CGVA 5D42A 3HW3A 4CGSA 4E5JA 4CHCA 4AWKA 4ZI0A 4AVGA 4NFZA 5CL0A 3HW4A 5JHTA 4AVLA 3EBJA 5CZNA 5EGAA 4AWHA 4AWMA 5FDDA 4AWGA 4AWFA 4E5EA 4ZQQA
chains in the Genus database with same CATH superfamily
4YYLA 5D9JA 5D4GA 3A4KA 5D8UA 2E52A 3WVPA 5CCYA 3HW5A 3CAEA 5DEBA 1KNVA 4CGSA 3ODHA 3MQYA 4ZI0A 2XI7A 4F0QA 5EGAA 1BAMA 3DW9A 2P14A 4AWHA 4E5EA 2XI5A 5FDGA 1SDOA 3V20A 3WVIA 4AVQA 4E5HA 5DESA 1M0IA 3BM3A 1VRRA 3DVOA 3WVGA 5JHTA 3EBJA 3V21A 5FDDA 4AWGA 1BHMA 2PFJA 3WVHA 5D2OA 5DBSA 5I13A 4E5GA 3HW3A 1ES8A 4E5JA 4AWKA 1DFMA 1D2IA 3HW4A 2FOKA 3WVKA 1DC1A 4AVLA 1FZRA 3N78A 4AWMA 1CFRA 2BAMA 1M0DA 3MQ6A 4ZQQA 3DPGA 1FOKA 4E5LA 3V1ZA 5JHVA 4E5IA 2FQZA 4F0PA 4CGXA 1ESGA 2P0JA 3HW6A 4E5FA 4ZHZA 5CGVA 5D42A 4CHCA 4OC8A 4R28A 2EWFA 4AVGA 4NFZA 5CL0A 3BAMA 2GB7A 5CZNA 4AWFA 3N7BA
chains in the Genus database with same CATH topology
4YYLA 5D9JA 5D4GA 3A4KA 5D8UA 2E52A 3WVPA 5CCYA 3HW5A 3CAEA 5DEBA 1KNVA 4CGSA 3ODHA 3MQYA 4ZI0A 2XI7A 4F0QA 5EGAA 1BAMA 3DW9A 2P14A 4AWHA 4E5EA 2XI5A 5FDGA 1SDOA 3V20A 3WVIA 4AVQA 4E5HA 5DESA 1M0IA 3BM3A 1VRRA 3DVOA 3WVGA 5JHTA 3EBJA 3V21A 5FDDA 4AWGA 1BHMA 2PFJA 3WVHA 5D2OA 5DBSA 5I13A 4E5GA 3HW3A 1ES8A 4E5JA 4AWKA 1DFMA 1D2IA 3HW4A 2FOKA 3WVKA 1DC1A 4AVLA 1FZRA 3N78A 4AWMA 1CFRA 2BAMA 1M0DA 3MQ6A 4ZQQA 3DPGA 1FOKA 4E5LA 3V1ZA 5JHVA 4E5IA 2FQZA 4F0PA 4CGXA 1ESGA 2P0JA 3HW6A 4E5FA 4ZHZA 5CGVA 5D42A 4CHCA 4OC8A 4R28A 2EWFA 4AVGA 4NFZA 5CL0A 3BAMA 2GB7A 5CZNA 4AWFA 3N7BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D2O A;  5FDG A;  5DBS A;  4YYL A;  5D9J A;  5D4G A;  5D8U A;  5I13 A;  4AVQ A;  4E5L A;  5DES A;  4E5H A;  5CCY A;  5JHV A;  4E5I A;  4E5G A;  3HW5 A;  4CGX A;  3HW6 A;  4E5F A;  4ZHZ A;  5DEB A;  5CGV A;  5D42 A;  3HW3 A;  4CGS A;  4E5J A;  4CHC A;  4AWK A;  4ZI0 A;  4AVG A;  4NFZ A;  5CL0 A;  3HW4 A;  5JHT A;  4AVL A;  3EBJ A;  5CZN A;  5EGA A;  4AWH A;  4AWM A;  5FDD A;  4AWG A;  4AWF A;  4E5E A;  4ZQQ A; 
#chains in the Genus database with same CATH topology
 4YYL A;  5D9J A;  5D4G A;  3A4K A;  5D8U A;  2E52 A;  3WVP A;  5CCY A;  3HW5 A;  3CAE A;  5DEB A;  1KNV A;  4CGS A;  3ODH A;  3MQY A;  4ZI0 A;  2XI7 A;  4F0Q A;  5EGA A;  1BAM A;  3DW9 A;  2P14 A;  4AWH A;  4E5E A;  2XI5 A;  5FDG A;  1SDO A;  3V20 A;  3WVI A;  4AVQ A;  4E5H A;  5DES A;  1M0I A;  3BM3 A;  1VRR A;  3DVO A;  3WVG A;  5JHT A;  3EBJ A;  3V21 A;  5FDD A;  4AWG A;  1BHM A;  2PFJ A;  3WVH A;  5D2O A;  5DBS A;  5I13 A;  4E5G A;  3HW3 A;  1ES8 A;  4E5J A;  4AWK A;  1DFM A;  1D2I A;  3HW4 A;  2FOK A;  3WVK A;  1DC1 A;  4AVL A;  1FZR A;  3N78 A;  4AWM A;  1CFR A;  2BAM A;  1M0D A;  3MQ6 A;  4ZQQ A;  3DPG A;  1FOK A;  4E5L A;  3V1Z A;  5JHV A;  4E5I A;  2FQZ A;  4F0P A;  4CGX A;  1ESG A;  2P0J A;  3HW6 A;  4E5F A;  4ZHZ A;  5CGV A;  5D42 A;  4CHC A;  4OC8 A;  4R28 A;  2EWF A;  4AVG A;  4NFZ A;  5CL0 A;  3BAM A;  2GB7 A;  5CZN A;  4AWF A;  3N7B A; 
#chains in the Genus database with same CATH homology
 4YYL A;  5D9J A;  5D4G A;  3A4K A;  5D8U A;  2E52 A;  3WVP A;  5CCY A;  3HW5 A;  3CAE A;  5DEB A;  1KNV A;  4CGS A;  3ODH A;  3MQY A;  4ZI0 A;  2XI7 A;  4F0Q A;  5EGA A;  1BAM A;  3DW9 A;  2P14 A;  4AWH A;  4E5E A;  2XI5 A;  5FDG A;  1SDO A;  3V20 A;  3WVI A;  4AVQ A;  4E5H A;  5DES A;  1M0I A;  3BM3 A;  1VRR A;  3DVO A;  3WVG A;  5JHT A;  3EBJ A;  3V21 A;  5FDD A;  4AWG A;  1BHM A;  2PFJ A;  3WVH A;  5D2O A;  5DBS A;  5I13 A;  4E5G A;  3HW3 A;  1ES8 A;  4E5J A;  4AWK A;  1DFM A;  1D2I A;  3HW4 A;  2FOK A;  3WVK A;  1DC1 A;  4AVL A;  1FZR A;  3N78 A;  4AWM A;  1CFR A;  2BAM A;  1M0D A;  3MQ6 A;  4ZQQ A;  3DPG A;  1FOK A;  4E5L A;  3V1Z A;  5JHV A;  4E5I A;  2FQZ A;  4F0P A;  4CGX A;  1ESG A;  2P0J A;  3HW6 A;  4E5F A;  4ZHZ A;  5CGV A;  5D42 A;  4CHC A;  4OC8 A;  4R28 A;  2EWF A;  4AVG A;  4NFZ A;  5CL0 A;  3BAM A;  2GB7 A;  5CZN A;  4AWF A;  3N7B A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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