4ZJSA

Crystal structure of a chimeric acetylcholine binding protein from aplysia californica (ac-achbp) containing the main immunogenic region (mir) from the human alpha 1 subunit of the muscle nicotinic acetylcholine receptor in complex with anatoxin-a.
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
206
structure length
206
Chain Sequence
EHETRLVAKLFKDYSSVVRPVEDHRQVVEVTLGFTLQDIVKADSSTNEVDLVYYEQQRWVDYNLKWNPDDYGGVKKIHIPAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Main immunogenic region structure promotes binding of conformation-dependent myasthenia gravis autoantibodies, nicotinic acetylcholine receptor conformation maturation, and agonist sensitivity.
pubmed doi rcsb
molecule keywords Acetylcholine receptor subunit alpha,Soluble acetylcholine r
source organism Homo sapiens
molecule tags Immune system
total genus 49
structure length 206
sequence length 206
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2015-04-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4zjsA00
3ZDHA 2WNJA 2BG9B 1UV6A 2XZ5A 4HFHA 5HEUA 4UM3S 5JMEA 2BYNA 4IL4A 4UM3P 5TVCA 1UX2A 5FJVA 5AINA 3PMZA 5AFJA 3UUBA 3UU8A 2WNLA 3WTJA 2Y57A 4TNWA 3SH1A 4HFIA 3WTIA 2YMDA 2XQ5A 2BJ0A 2UZ6A 3WTLA 4BQTA 4ZK1A 5J5IA 2X00A 3SIOA 3ZKRA 2XQ6A 3T4MA 2WZYA 3RI5A 4PIRA 2ZJUA 5HEGA 4QH4A 4ZJSA 1I9BA 4UY2A 5SYOA 2BYPA 4X5TA 3TLUA 5BP0A 2QC1B 5HCMA 4IL9A 5AFKA 5HCJA 5J0ZA 2BYRA 5AFNA 4LMJA 2YMEA 3RIFA 4UXUA 5AFMA 5L47A 2BYSA 4EZ1A 4HFCA 3UQ4A 3U8JA 4A97A 4TNVA 2XQ7A 2W8GA 3UQ7A 2XQ8A 5AFLA 2BYQA 5L4HA 3RIAA 2XZ6A 3RQUA 5AFHA 4WV9A 4TWDA 5KZUA 3EI0A 2BG9C 3UU3A 2Y56A 3SQ9A 2PH9A 3PEOA 4NPPA 3EHZA 2PGZA 3TLTA 4Z91A 4TWHA 3UU4A 3RQWA 2WNCA 3LSVA 2WN9A 4Z90A 4ZZBA 4BFQA 3JAEA 4HQPA 4ZJTA 4HFEA 3SQ6A 5KE4A 5L4EA 5LXBA 5CO5A 5LG3A 3WIPA 4ILBA 4COFA 4B5DA 3U8MA 3WTHA 2YN6A 2VL0A 2C9TA 3P4WA 3JAFA 3ZDGA 4ILCA 2XNTA 4QH5A 2ZJVA 2XQAA 4ZRUA 2BG9A 2YOEA 4XHEA 4HFDA 3TLVA 3TLWA 4UM3A 3U8NA 5AFMB 5HEJA 5J5GA 2XNVA 4UM1A 4HFBA 3TLSA 3WTKA 2XNUA 4F8HA 4QACA 2Y7YA 3C84A 3WTOA 4NZBA 4AFHA 2YKSA 2XYSA 3UU6A 4QH1A 5IUXA 2X00D 3U8LA 1UW6A 3EAMA 4LMLA 4TWFA 5HEOA 3RHWA 2Y54A 5BRXA 5J5FA 4XK9A 3GUAA 5BW2A 4DBMA 3IGQA 4A98A 3JADA 2XYTA 4ALXA 3U8KA 5HEHA 2BR7A 4ZR6A 2XQ3A 3P50A 4LMKA 4IREA 4FRRA 3UU5A 2W8FA 3WTNA 2BR8A 4D01A 4AFTA 5J5HA 4ZZCA 4AFGA 2XQ4A 2Y58A 4ILAA 4QABA 4QAAA 4ZK4A 3WTMA 2XQ9A 2BG9E 5CFBA 3C79A
chains in the Genus database with same CATH superfamily
3ZDHA 2WNJA 2BG9B 1UV6A 2XZ5A 4HFHA 5HEUA 4UM3S 5JMEA 2BYNA 4IL4A 4UM3P 5TVCA 1UX2A 5FJVA 5AINA 3PMZA 5AFJA 3UUBA 3UU8A 2WNLA 3WTJA 2Y57A 4TNWA 3SH1A 4HFIA 3WTIA 2YMDA 2XQ5A 2BJ0A 2UZ6A 3WTLA 4BQTA 4ZK1A 5J5IA 2X00A 3SIOA 3ZKRA 2XQ6A 3T4MA 2WZYA 3RI5A 4PIRA 2ZJUA 5HEGA 4QH4A 4ZJSA 1I9BA 4UY2A 5SYOA 2BYPA 4X5TA 3TLUA 5BP0A 2QC1B 5HCMA 4IL9A 5AFKA 5HCJA 5J0ZA 2BYRA 5AFNA 4LMJA 2YMEA 3RIFA 4UXUA 5AFMA 5L47A 2BYSA 4EZ1A 4HFCA 3UQ4A 3U8JA 4A97A 4TNVA 2XQ7A 2W8GA 3UQ7A 2XQ8A 5AFLA 2BYQA 5L4HA 3RIAA 2XZ6A 3RQUA 5AFHA 4WV9A 4TWDA 5KZUA 3EI0A 2BG9C 3UU3A 2Y56A 3SQ9A 2PH9A 3PEOA 4NPPA 3EHZA 2PGZA 3TLTA 4Z91A 4TWHA 3UU4A 3RQWA 2WNCA 3LSVA 2WN9A 4Z90A 4ZZBA 4BFQA 3JAEA 4HQPA 4ZJTA 4HFEA 3SQ6A 5KE4A 5L4EA 5LXBA 5CO5A 5LG3A 3WIPA 4ILBA 4COFA 4B5DA 3U8MA 3WTHA 2YN6A 2VL0A 2C9TA 3P4WA 3JAFA 3ZDGA 4ILCA 2XNTA 4QH5A 2ZJVA 2XQAA 4ZRUA 2BG9A 2YOEA 4XHEA 4HFDA 3TLVA 3TLWA 4UM3A 3U8NA 5AFMB 5HEJA 5J5GA 2XNVA 4UM1A 4HFBA 3TLSA 3WTKA 2XNUA 4F8HA 4QACA 2Y7YA 3C84A 3WTOA 4NZBA 4AFHA 2YKSA 2XYSA 3UU6A 4QH1A 5IUXA 2X00D 3U8LA 1UW6A 3EAMA 4LMLA 4TWFA 5HEOA 3RHWA 2Y54A 5BRXA 5J5FA 4XK9A 3GUAA 5BW2A 4DBMA 3IGQA 4A98A 3JADA 2XYTA 4ALXA 3U8KA 5HEHA 2BR7A 4ZR6A 2XQ3A 3P50A 4LMKA 4IREA 4FRRA 3UU5A 2W8FA 3WTNA 2BR8A 4D01A 4AFTA 5J5HA 4ZZCA 4AFGA 2XQ4A 2Y58A 4ILAA 4QABA 4QAAA 4ZK4A 3WTMA 2XQ9A 2BG9E 5CFBA 3C79A
chains in the Genus database with same CATH topology
3ZDHA 2WNJA 2BG9B 1UV6A 2XZ5A 4HFHA 5HEUA 4UM3S 5JMEA 2BYNA 4IL4A 4UM3P 5TVCA 1UX2A 5FJVA 5AINA 3PMZA 5AFJA 3UUBA 3UU8A 2WNLA 3WTJA 2Y57A 4TNWA 3SH1A 4HFIA 3WTIA 2YMDA 2XQ5A 2BJ0A 2UZ6A 3WTLA 4BQTA 4ZK1A 5J5IA 2X00A 3SIOA 3ZKRA 2XQ6A 3T4MA 2WZYA 3RI5A 4PIRA 2ZJUA 5HEGA 4QH4A 4ZJSA 1I9BA 4UY2A 5SYOA 2BYPA 4X5TA 3TLUA 5BP0A 2QC1B 5HCMA 4IL9A 5AFKA 5HCJA 5J0ZA 2BYRA 5AFNA 4LMJA 2YMEA 3RIFA 4UXUA 5AFMA 5L47A 2BYSA 4EZ1A 4HFCA 3UQ4A 3U8JA 4A97A 4TNVA 2XQ7A 2W8GA 3UQ7A 2XQ8A 5AFLA 2BYQA 5L4HA 3RIAA 2XZ6A 3RQUA 5AFHA 4WV9A 4TWDA 5KZUA 3EI0A 2BG9C 3UU3A 2Y56A 3SQ9A 2PH9A 3PEOA 4NPPA 3EHZA 2PGZA 3TLTA 4Z91A 4TWHA 3UU4A 3RQWA 2WNCA 3LSVA 2WN9A 4Z90A 4ZZBA 4BFQA 3JAEA 4HQPA 4ZJTA 4HFEA 3SQ6A 5KE4A 5L4EA 5LXBA 5CO5A 5LG3A 3WIPA 4ILBA 4COFA 4B5DA 3U8MA 3WTHA 2YN6A 2VL0A 2C9TA 3P4WA 3JAFA 3ZDGA 4ILCA 2XNTA 4QH5A 2ZJVA 2XQAA 4ZRUA 2BG9A 2YOEA 4XHEA 4HFDA 3TLVA 3TLWA 4UM3A 3U8NA 5AFMB 5HEJA 5J5GA 2XNVA 4UM1A 4HFBA 3TLSA 3WTKA 2XNUA 4F8HA 4QACA 2Y7YA 3C84A 3WTOA 4NZBA 4AFHA 2YKSA 2XYSA 3UU6A 4QH1A 5IUXA 2X00D 3U8LA 1UW6A 3EAMA 4LMLA 4TWFA 5HEOA 3RHWA 2Y54A 5BRXA 5J5FA 4XK9A 3GUAA 5BW2A 4DBMA 3IGQA 4A98A 3JADA 2XYTA 4ALXA 3U8KA 5HEHA 2BR7A 4ZR6A 2XQ3A 3P50A 4LMKA 4IREA 4FRRA 3UU5A 2W8FA 3WTNA 2BR8A 4D01A 4AFTA 5J5HA 4ZZCA 4AFGA 2XQ4A 2Y58A 4ILAA 4QABA 4QAAA 4ZK4A 3WTMA 2XQ9A 2BG9E 5CFBA 3C79A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ZDH A;  2WNJ A;  2BG9 B;  1UV6 A;  2XZ5 A;  4HFH A;  5HEU A;  4UM3 S;  5JME A;  2BYN A;  4IL4 A;  4UM3 P;  5TVC A;  1UX2 A;  5FJV A;  5AIN A;  3PMZ A;  5AFJ A;  3UUB A;  3UU8 A;  2WNL A;  3WTJ A;  2Y57 A;  4TNW A;  3SH1 A;  4HFI A;  3WTI A;  2YMD A;  2XQ5 A;  2BJ0 A;  2UZ6 A;  3WTL A;  4BQT A;  4ZK1 A;  5J5I A;  2X00 A;  3SIO A;  3ZKR A;  2XQ6 A;  3T4M A;  2WZY A;  3RI5 A;  4PIR A;  2ZJU A;  5HEG A;  4QH4 A;  4ZJS A;  1I9B A;  4UY2 A;  5SYO A;  2BYP A;  4X5T A;  3TLU A;  5BP0 A;  2QC1 B;  5HCM A;  4IL9 A;  5AFK A;  5HCJ A;  5J0Z A;  2BYR A;  5AFN A;  4LMJ A;  2YME A;  3RIF A;  4UXU A;  5AFM A;  5L47 A;  2BYS A;  4EZ1 A;  4HFC A;  3UQ4 A;  3U8J A;  4A97 A;  4TNV A;  2XQ7 A;  2W8G A;  3UQ7 A;  2XQ8 A;  5AFL A;  2BYQ A;  5L4H A;  3RIA A;  2XZ6 A;  3RQU A;  5AFH A;  4WV9 A;  4TWD A;  5KZU A;  3EI0 A;  2BG9 C;  3UU3 A;  2Y56 A;  3SQ9 A;  2PH9 A;  3PEO A;  4NPP A;  3EHZ A;  2PGZ A;  3TLT A;  4Z91 A;  4TWH A;  3UU4 A;  3RQW A;  2WNC A;  3LSV A;  2WN9 A;  4Z90 A;  4ZZB A;  4BFQ A;  3JAE A;  4HQP A;  4ZJT A;  4HFE A;  3SQ6 A;  5KE4 A;  5L4E A;  5LXB A;  5CO5 A;  5LG3 A;  3WIP A;  4ILB A;  4COF A;  4B5D A;  3U8M A;  3WTH A;  2YN6 A;  2VL0 A;  2C9T A;  3P4W A;  3JAF A;  3ZDG A;  4ILC A;  2XNT A;  4QH5 A;  2ZJV A;  2XQA A;  4ZRU A;  2BG9 A;  2YOE A;  4XHE A;  4HFD A;  3TLV A;  3TLW A;  4UM3 A;  3U8N A;  5AFM B;  5HEJ A;  5J5G A;  2XNV A;  4UM1 A;  4HFB A;  3TLS A;  3WTK A;  2XNU A;  4F8H A;  4QAC A;  2Y7Y A;  3C84 A;  3WTO A;  4NZB A;  4AFH A;  2YKS A;  2XYS A;  3UU6 A;  4QH1 A;  5IUX A;  2X00 D;  3U8L A;  1UW6 A;  3EAM A;  4LML A;  4TWF A;  5HEO A;  3RHW A;  2Y54 A;  5BRX A;  5J5F A;  4XK9 A;  3GUA A;  5BW2 A;  4DBM A;  3IGQ A;  4A98 A;  3JAD A;  2XYT A;  4ALX A;  3U8K A;  5HEH A;  2BR7 A;  4ZR6 A;  2XQ3 A;  3P50 A;  4LMK A;  4IRE A;  4FRR A;  3UU5 A;  2W8F A;  3WTN A;  2BR8 A;  4D01 A;  4AFT A;  5J5H A;  4ZZC A;  4AFG A;  2XQ4 A;  2Y58 A;  4ILA A;  4QAB A;  4QAA A;  4ZK4 A;  3WTM A;  2XQ9 A;  2BG9 E;  5CFB A;  3C79 A; 
#chains in the Genus database with same CATH topology
 3ZDH A;  2WNJ A;  2BG9 B;  1UV6 A;  2XZ5 A;  4HFH A;  5HEU A;  4UM3 S;  5JME A;  2BYN A;  4IL4 A;  4UM3 P;  5TVC A;  1UX2 A;  5FJV A;  5AIN A;  3PMZ A;  5AFJ A;  3UUB A;  3UU8 A;  2WNL A;  3WTJ A;  2Y57 A;  4TNW A;  3SH1 A;  4HFI A;  3WTI A;  2YMD A;  2XQ5 A;  2BJ0 A;  2UZ6 A;  3WTL A;  4BQT A;  4ZK1 A;  5J5I A;  2X00 A;  3SIO A;  3ZKR A;  2XQ6 A;  3T4M A;  2WZY A;  3RI5 A;  4PIR A;  2ZJU A;  5HEG A;  4QH4 A;  4ZJS A;  1I9B A;  4UY2 A;  5SYO A;  2BYP A;  4X5T A;  3TLU A;  5BP0 A;  2QC1 B;  5HCM A;  4IL9 A;  5AFK A;  5HCJ A;  5J0Z A;  2BYR A;  5AFN A;  4LMJ A;  2YME A;  3RIF A;  4UXU A;  5AFM A;  5L47 A;  2BYS A;  4EZ1 A;  4HFC A;  3UQ4 A;  3U8J A;  4A97 A;  4TNV A;  2XQ7 A;  2W8G A;  3UQ7 A;  2XQ8 A;  5AFL A;  2BYQ A;  5L4H A;  3RIA A;  2XZ6 A;  3RQU A;  5AFH A;  4WV9 A;  4TWD A;  5KZU A;  3EI0 A;  2BG9 C;  3UU3 A;  2Y56 A;  3SQ9 A;  2PH9 A;  3PEO A;  4NPP A;  3EHZ A;  2PGZ A;  3TLT A;  4Z91 A;  4TWH A;  3UU4 A;  3RQW A;  2WNC A;  3LSV A;  2WN9 A;  4Z90 A;  4ZZB A;  4BFQ A;  3JAE A;  4HQP A;  4ZJT A;  4HFE A;  3SQ6 A;  5KE4 A;  5L4E A;  5LXB A;  5CO5 A;  5LG3 A;  3WIP A;  4ILB A;  4COF A;  4B5D A;  3U8M A;  3WTH A;  2YN6 A;  2VL0 A;  2C9T A;  3P4W A;  3JAF A;  3ZDG A;  4ILC A;  2XNT A;  4QH5 A;  2ZJV A;  2XQA A;  4ZRU A;  2BG9 A;  2YOE A;  4XHE A;  4HFD A;  3TLV A;  3TLW A;  4UM3 A;  3U8N A;  5AFM B;  5HEJ A;  5J5G A;  2XNV A;  4UM1 A;  4HFB A;  3TLS A;  3WTK A;  2XNU A;  4F8H A;  4QAC A;  2Y7Y A;  3C84 A;  3WTO A;  4NZB A;  4AFH A;  2YKS A;  2XYS A;  3UU6 A;  4QH1 A;  5IUX A;  2X00 D;  3U8L A;  1UW6 A;  3EAM A;  4LML A;  4TWF A;  5HEO A;  3RHW A;  2Y54 A;  5BRX A;  5J5F A;  4XK9 A;  3GUA A;  5BW2 A;  4DBM A;  3IGQ A;  4A98 A;  3JAD A;  2XYT A;  4ALX A;  3U8K A;  5HEH A;  2BR7 A;  4ZR6 A;  2XQ3 A;  3P50 A;  4LMK A;  4IRE A;  4FRR A;  3UU5 A;  2W8F A;  3WTN A;  2BR8 A;  4D01 A;  4AFT A;  5J5H A;  4ZZC A;  4AFG A;  2XQ4 A;  2Y58 A;  4ILA A;  4QAB A;  4QAA A;  4ZK4 A;  3WTM A;  2XQ9 A;  2BG9 E;  5CFB A;  3C79 A; 
#chains in the Genus database with same CATH homology
 3ZDH A;  2WNJ A;  2BG9 B;  1UV6 A;  2XZ5 A;  4HFH A;  5HEU A;  4UM3 S;  5JME A;  2BYN A;  4IL4 A;  4UM3 P;  5TVC A;  1UX2 A;  5FJV A;  5AIN A;  3PMZ A;  5AFJ A;  3UUB A;  3UU8 A;  2WNL A;  3WTJ A;  2Y57 A;  4TNW A;  3SH1 A;  4HFI A;  3WTI A;  2YMD A;  2XQ5 A;  2BJ0 A;  2UZ6 A;  3WTL A;  4BQT A;  4ZK1 A;  5J5I A;  2X00 A;  3SIO A;  3ZKR A;  2XQ6 A;  3T4M A;  2WZY A;  3RI5 A;  4PIR A;  2ZJU A;  5HEG A;  4QH4 A;  4ZJS A;  1I9B A;  4UY2 A;  5SYO A;  2BYP A;  4X5T A;  3TLU A;  5BP0 A;  2QC1 B;  5HCM A;  4IL9 A;  5AFK A;  5HCJ A;  5J0Z A;  2BYR A;  5AFN A;  4LMJ A;  2YME A;  3RIF A;  4UXU A;  5AFM A;  5L47 A;  2BYS A;  4EZ1 A;  4HFC A;  3UQ4 A;  3U8J A;  4A97 A;  4TNV A;  2XQ7 A;  2W8G A;  3UQ7 A;  2XQ8 A;  5AFL A;  2BYQ A;  5L4H A;  3RIA A;  2XZ6 A;  3RQU A;  5AFH A;  4WV9 A;  4TWD A;  5KZU A;  3EI0 A;  2BG9 C;  3UU3 A;  2Y56 A;  3SQ9 A;  2PH9 A;  3PEO A;  4NPP A;  3EHZ A;  2PGZ A;  3TLT A;  4Z91 A;  4TWH A;  3UU4 A;  3RQW A;  2WNC A;  3LSV A;  2WN9 A;  4Z90 A;  4ZZB A;  4BFQ A;  3JAE A;  4HQP A;  4ZJT A;  4HFE A;  3SQ6 A;  5KE4 A;  5L4E A;  5LXB A;  5CO5 A;  5LG3 A;  3WIP A;  4ILB A;  4COF A;  4B5D A;  3U8M A;  3WTH A;  2YN6 A;  2VL0 A;  2C9T A;  3P4W A;  3JAF A;  3ZDG A;  4ILC A;  2XNT A;  4QH5 A;  2ZJV A;  2XQA A;  4ZRU A;  2BG9 A;  2YOE A;  4XHE A;  4HFD A;  3TLV A;  3TLW A;  4UM3 A;  3U8N A;  5AFM B;  5HEJ A;  5J5G A;  2XNV A;  4UM1 A;  4HFB A;  3TLS A;  3WTK A;  2XNU A;  4F8H A;  4QAC A;  2Y7Y A;  3C84 A;  3WTO A;  4NZB A;  4AFH A;  2YKS A;  2XYS A;  3UU6 A;  4QH1 A;  5IUX A;  2X00 D;  3U8L A;  1UW6 A;  3EAM A;  4LML A;  4TWF A;  5HEO A;  3RHW A;  2Y54 A;  5BRX A;  5J5F A;  4XK9 A;  3GUA A;  5BW2 A;  4DBM A;  3IGQ A;  4A98 A;  3JAD A;  2XYT A;  4ALX A;  3U8K A;  5HEH A;  2BR7 A;  4ZR6 A;  2XQ3 A;  3P50 A;  4LMK A;  4IRE A;  4FRR A;  3UU5 A;  2W8F A;  3WTN A;  2BR8 A;  4D01 A;  4AFT A;  5J5H A;  4ZZC A;  4AFG A;  2XQ4 A;  2Y58 A;  4ILA A;  4QAB A;  4QAA A;  4ZK4 A;  3WTM A;  2XQ9 A;  2BG9 E;  5CFB A;  3C79 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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