4ZJSA

Crystal structure of a chimeric acetylcholine binding protein from aplysia californica (ac-achbp) containing the main immunogenic region (mir) from the human alpha 1 subunit of the muscle nicotinic acetylcholine receptor in complex with anatoxin-a.
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
206
structure length
206
Chain Sequence
EHETRLVAKLFKDYSSVVRPVEDHRQVVEVTLGFTLQDIVKADSSTNEVDLVYYEQQRWVDYNLKWNPDDYGGVKKIHIPAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
source organism Homo sapiens
publication title Main immunogenic region structure promotes binding of conformation-dependent myasthenia gravis autoantibodies, nicotinic acetylcholine receptor conformation maturation, and agonist sensitivity.
pubmed doi rcsb
molecule keywords Acetylcholine receptor subunit alpha,Soluble acetylcholine r
total genus 49
structure length 206
sequence length 206
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2015-04-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4zjsA00
2XQ4A 2BG9B 5AFNA 3EHZA 2BR7A 4LMKA 4EZ1A 2XNTA 2XQ5A 2XYSA 2PGZA 2XNVA 3UQ4A 2W8GA 4QABA 4UM3A 5J5FA 4WV9A 2BJ0A 5JMEA 4QH1A 1UV6A 5CO5A 2W8FA 5BRXA 3U8LA 2Y58A 5BW2A 2VL0A 2YMDA 3WTIA 5J5IA 2XQ8A 4HFCA 4TWDA 4HFHA 3SQ9A 2WN9A 5CFBA 2Y7YA 4D01A 4XK9A 5J0ZA 3WTHA 4AFHA 4NPPA 4FRRA 3TLSA 4COFA 2X00D 4ZJSA 4HQPA 4ZR6A 3P4WA 3RQUA 3TLVA 3UU4A 2BG9C 3JAEA 5HEOA 4IL4A 5HEUA 3UU5A 4TNVA 5BP0A 5J5HA 2YOEA 3TLTA 4PIRA 3ZDHA 4ZK1A 2Y56A 3U8KA 2WNCA 2WNJA 2BYPA 4ALXA 3IGQA 5AFMB 3WTOA 5KE4A 5HCJA 2Y57A 4UM1A 4TWHA 2PH9A 2XQ9A 3WTNA 2XYTA 2BYSA 3RI5A 3U8JA 3ZKRA 2BYRA 5SYOA 5HEHA 2WNLA 4TWFA 4BQTA 2XQAA 3JAFA 3JADA 4AFGA 2BYNA 4ILAA 2XZ6A 3U8NA 3EI0A 5HCMA 3SQ6A 4F8HA 3SH1A 1UW6A 4HFDA 4ZRUA 2BG9A 4X5TA 5L4HA 3WTKA 4LMJA 5LXBA 2XQ6A 3EAMA 2Y54A 4QAAA 3RIFA 5AFJA 2BYQA 3RIAA 3C79A 4HFBA 4QH5A 5IUXA 4DBMA 5J5GA 2XZ5A 2YMEA 3LSVA 4UM3S 4AFTA 2XQ3A 5FJVA 2ZJUA 3C84A 3TLUA 2YKSA 5AFHA 2XQ7A 5AFLA 5L47A 4UXUA 4ZK4A 3ZDGA 3WTMA 3TLWA 4Z90A 4UY2A 2WZYA 4IL9A 4QH4A 5AFKA 4BFQA 3UQ7A 3UU3A 5L4EA 3UU8A 3U8MA 2C9TA 3T4MA 4HFIA 5HEGA 4A97A 4IREA 5HEJA 2XNUA 3WTJA 2ZJVA 3PEOA 3SIOA 3UU6A 2BG9E 4XHEA 4NZBA 3WTLA 3P50A 4ZZCA 4ILCA 4A98A 1I9BA 4HFEA 5AINA 3WIPA 2UZ6A 3RHWA 2QC1B 5AFMA 3RQWA 4ZZBA 3UUBA 5KZUA 4B5DA 2YN6A 4UM3P 3PMZA 4ILBA 2X00A 4LMLA 4QACA 3GUAA 5LG3A 4Z91A 5TVCA 4ZJTA 1UX2A 4TNWA 2BR8A
chains in the Genus database with same CATH superfamily
2XQ4A 2BG9B 5AFNA 3EHZA 2BR7A 4LMKA 4EZ1A 2XNTA 2XQ5A 2XYSA 2PGZA 2XNVA 3UQ4A 2W8GA 4QABA 4UM3A 5J5FA 4WV9A 2BJ0A 5JMEA 4QH1A 1UV6A 5CO5A 2W8FA 5BRXA 3U8LA 2Y58A 5BW2A 2VL0A 2YMDA 3WTIA 5J5IA 2XQ8A 4HFCA 4TWDA 4HFHA 3SQ9A 2WN9A 5CFBA 2Y7YA 4D01A 4XK9A 5J0ZA 3WTHA 4AFHA 4NPPA 4FRRA 3TLSA 4COFA 2X00D 4ZJSA 4HQPA 4ZR6A 3P4WA 3RQUA 3TLVA 3UU4A 2BG9C 3JAEA 5HEOA 4IL4A 5HEUA 3UU5A 4TNVA 5BP0A 5J5HA 2YOEA 3TLTA 4PIRA 3ZDHA 4ZK1A 2Y56A 3U8KA 2WNCA 2WNJA 2BYPA 4ALXA 3IGQA 5AFMB 3WTOA 5KE4A 5HCJA 2Y57A 4UM1A 4TWHA 2PH9A 2XQ9A 3WTNA 2XYTA 2BYSA 3RI5A 3U8JA 3ZKRA 2BYRA 5SYOA 5HEHA 2WNLA 4TWFA 4BQTA 2XQAA 3JAFA 3JADA 4AFGA 2BYNA 4ILAA 2XZ6A 3U8NA 3EI0A 5HCMA 3SQ6A 4F8HA 3SH1A 1UW6A 4HFDA 4ZRUA 2BG9A 4X5TA 5L4HA 3WTKA 4LMJA 5LXBA 2XQ6A 3EAMA 2Y54A 4QAAA 3RIFA 5AFJA 2BYQA 3RIAA 3C79A 4HFBA 4QH5A 5IUXA 4DBMA 5J5GA 2XZ5A 2YMEA 3LSVA 4UM3S 4AFTA 2XQ3A 5FJVA 2ZJUA 3C84A 3TLUA 2YKSA 5AFHA 2XQ7A 5AFLA 5L47A 4UXUA 4ZK4A 3ZDGA 3WTMA 3TLWA 4Z90A 4UY2A 2WZYA 4IL9A 4QH4A 5AFKA 4BFQA 3UQ7A 3UU3A 5L4EA 3UU8A 3U8MA 2C9TA 3T4MA 4HFIA 5HEGA 4A97A 4IREA 5HEJA 2XNUA 3WTJA 2ZJVA 3PEOA 3SIOA 3UU6A 2BG9E 4XHEA 4NZBA 3WTLA 3P50A 4ZZCA 4ILCA 4A98A 1I9BA 4HFEA 5AINA 3WIPA 2UZ6A 3RHWA 2QC1B 5AFMA 3RQWA 4ZZBA 3UUBA 5KZUA 4B5DA 2YN6A 4UM3P 3PMZA 4ILBA 2X00A 4LMLA 4QACA 3GUAA 5LG3A 4Z91A 5TVCA 4ZJTA 1UX2A 4TNWA 2BR8A
chains in the Genus database with same CATH topology
2XQ4A 2BG9B 5AFNA 3EHZA 2BR7A 4LMKA 4EZ1A 2XNTA 2XQ5A 2XYSA 2PGZA 2XNVA 3UQ4A 2W8GA 4QABA 4UM3A 5J5FA 4WV9A 2BJ0A 5JMEA 4QH1A 1UV6A 5CO5A 2W8FA 5BRXA 3U8LA 2Y58A 5BW2A 2VL0A 2YMDA 3WTIA 5J5IA 2XQ8A 4HFCA 4TWDA 4HFHA 3SQ9A 2WN9A 5CFBA 2Y7YA 4D01A 4XK9A 5J0ZA 3WTHA 4AFHA 4NPPA 4FRRA 3TLSA 4COFA 2X00D 4ZJSA 4HQPA 4ZR6A 3P4WA 3RQUA 3TLVA 3UU4A 2BG9C 3JAEA 5HEOA 4IL4A 5HEUA 3UU5A 4TNVA 5BP0A 5J5HA 2YOEA 3TLTA 4PIRA 3ZDHA 4ZK1A 2Y56A 3U8KA 2WNCA 2WNJA 2BYPA 4ALXA 3IGQA 5AFMB 3WTOA 5KE4A 5HCJA 2Y57A 4UM1A 4TWHA 2PH9A 2XQ9A 3WTNA 2XYTA 2BYSA 3RI5A 3U8JA 3ZKRA 2BYRA 5SYOA 5HEHA 2WNLA 4TWFA 4BQTA 2XQAA 3JAFA 3JADA 4AFGA 2BYNA 4ILAA 2XZ6A 3U8NA 3EI0A 5HCMA 3SQ6A 4F8HA 3SH1A 1UW6A 4HFDA 4ZRUA 2BG9A 4X5TA 5L4HA 3WTKA 4LMJA 5LXBA 2XQ6A 3EAMA 2Y54A 4QAAA 3RIFA 5AFJA 2BYQA 3RIAA 3C79A 4HFBA 4QH5A 5IUXA 4DBMA 5J5GA 2XZ5A 2YMEA 3LSVA 4UM3S 4AFTA 2XQ3A 5FJVA 2ZJUA 3C84A 3TLUA 2YKSA 5AFHA 2XQ7A 5AFLA 5L47A 4UXUA 4ZK4A 3ZDGA 3WTMA 3TLWA 4Z90A 4UY2A 2WZYA 4IL9A 4QH4A 5AFKA 4BFQA 3UQ7A 3UU3A 5L4EA 3UU8A 3U8MA 2C9TA 3T4MA 4HFIA 5HEGA 4A97A 4IREA 5HEJA 2XNUA 3WTJA 2ZJVA 3PEOA 3SIOA 3UU6A 2BG9E 4XHEA 4NZBA 3WTLA 3P50A 4ZZCA 4ILCA 4A98A 1I9BA 4HFEA 5AINA 3WIPA 2UZ6A 3RHWA 2QC1B 5AFMA 3RQWA 4ZZBA 3UUBA 5KZUA 4B5DA 2YN6A 4UM3P 3PMZA 4ILBA 2X00A 4LMLA 4QACA 3GUAA 5LG3A 4Z91A 5TVCA 4ZJTA 1UX2A 4TNWA 2BR8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XQ4 A;  2BG9 B;  5AFN A;  3EHZ A;  2BR7 A;  4LMK A;  4EZ1 A;  2XNT A;  2XQ5 A;  2XYS A;  2PGZ A;  2XNV A;  3UQ4 A;  2W8G A;  4QAB A;  4UM3 A;  5J5F A;  4WV9 A;  2BJ0 A;  5JME A;  4QH1 A;  1UV6 A;  5CO5 A;  2W8F A;  5BRX A;  3U8L A;  2Y58 A;  5BW2 A;  2VL0 A;  2YMD A;  3WTI A;  5J5I A;  2XQ8 A;  4HFC A;  4TWD A;  4HFH A;  3SQ9 A;  2WN9 A;  5CFB A;  2Y7Y A;  4D01 A;  4XK9 A;  5J0Z A;  3WTH A;  4AFH A;  4NPP A;  4FRR A;  3TLS A;  4COF A;  2X00 D;  4ZJS A;  4HQP A;  4ZR6 A;  3P4W A;  3RQU A;  3TLV A;  3UU4 A;  2BG9 C;  3JAE A;  5HEO A;  4IL4 A;  5HEU A;  3UU5 A;  4TNV A;  5BP0 A;  5J5H A;  2YOE A;  3TLT A;  4PIR A;  3ZDH A;  4ZK1 A;  2Y56 A;  3U8K A;  2WNC A;  2WNJ A;  2BYP A;  4ALX A;  3IGQ A;  5AFM B;  3WTO A;  5KE4 A;  5HCJ A;  2Y57 A;  4UM1 A;  4TWH A;  2PH9 A;  2XQ9 A;  3WTN A;  2XYT A;  2BYS A;  3RI5 A;  3U8J A;  3ZKR A;  2BYR A;  5SYO A;  5HEH A;  2WNL A;  4TWF A;  4BQT A;  2XQA A;  3JAF A;  3JAD A;  4AFG A;  2BYN A;  4ILA A;  2XZ6 A;  3U8N A;  3EI0 A;  5HCM A;  3SQ6 A;  4F8H A;  3SH1 A;  1UW6 A;  4HFD A;  4ZRU A;  2BG9 A;  4X5T A;  5L4H A;  3WTK A;  4LMJ A;  5LXB A;  2XQ6 A;  3EAM A;  2Y54 A;  4QAA A;  3RIF A;  5AFJ A;  2BYQ A;  3RIA A;  3C79 A;  4HFB A;  4QH5 A;  5IUX A;  4DBM A;  5J5G A;  2XZ5 A;  2YME A;  3LSV A;  4UM3 S;  4AFT A;  2XQ3 A;  5FJV A;  2ZJU A;  3C84 A;  3TLU A;  2YKS A;  5AFH A;  2XQ7 A;  5AFL A;  5L47 A;  4UXU A;  4ZK4 A;  3ZDG A;  3WTM A;  3TLW A;  4Z90 A;  4UY2 A;  2WZY A;  4IL9 A;  4QH4 A;  5AFK A;  4BFQ A;  3UQ7 A;  3UU3 A;  5L4E A;  3UU8 A;  3U8M A;  2C9T A;  3T4M A;  4HFI A;  5HEG A;  4A97 A;  4IRE A;  5HEJ A;  2XNU A;  3WTJ A;  2ZJV A;  3PEO A;  3SIO A;  3UU6 A;  2BG9 E;  4XHE A;  4NZB A;  3WTL A;  3P50 A;  4ZZC A;  4ILC A;  4A98 A;  1I9B A;  4HFE A;  5AIN A;  3WIP A;  2UZ6 A;  3RHW A;  2QC1 B;  5AFM A;  3RQW A;  4ZZB A;  3UUB A;  5KZU A;  4B5D A;  2YN6 A;  4UM3 P;  3PMZ A;  4ILB A;  2X00 A;  4LML A;  4QAC A;  3GUA A;  5LG3 A;  4Z91 A;  5TVC A;  4ZJT A;  1UX2 A;  4TNW A;  2BR8 A; 
#chains in the Genus database with same CATH topology
 2XQ4 A;  2BG9 B;  5AFN A;  3EHZ A;  2BR7 A;  4LMK A;  4EZ1 A;  2XNT A;  2XQ5 A;  2XYS A;  2PGZ A;  2XNV A;  3UQ4 A;  2W8G A;  4QAB A;  4UM3 A;  5J5F A;  4WV9 A;  2BJ0 A;  5JME A;  4QH1 A;  1UV6 A;  5CO5 A;  2W8F A;  5BRX A;  3U8L A;  2Y58 A;  5BW2 A;  2VL0 A;  2YMD A;  3WTI A;  5J5I A;  2XQ8 A;  4HFC A;  4TWD A;  4HFH A;  3SQ9 A;  2WN9 A;  5CFB A;  2Y7Y A;  4D01 A;  4XK9 A;  5J0Z A;  3WTH A;  4AFH A;  4NPP A;  4FRR A;  3TLS A;  4COF A;  2X00 D;  4ZJS A;  4HQP A;  4ZR6 A;  3P4W A;  3RQU A;  3TLV A;  3UU4 A;  2BG9 C;  3JAE A;  5HEO A;  4IL4 A;  5HEU A;  3UU5 A;  4TNV A;  5BP0 A;  5J5H A;  2YOE A;  3TLT A;  4PIR A;  3ZDH A;  4ZK1 A;  2Y56 A;  3U8K A;  2WNC A;  2WNJ A;  2BYP A;  4ALX A;  3IGQ A;  5AFM B;  3WTO A;  5KE4 A;  5HCJ A;  2Y57 A;  4UM1 A;  4TWH A;  2PH9 A;  2XQ9 A;  3WTN A;  2XYT A;  2BYS A;  3RI5 A;  3U8J A;  3ZKR A;  2BYR A;  5SYO A;  5HEH A;  2WNL A;  4TWF A;  4BQT A;  2XQA A;  3JAF A;  3JAD A;  4AFG A;  2BYN A;  4ILA A;  2XZ6 A;  3U8N A;  3EI0 A;  5HCM A;  3SQ6 A;  4F8H A;  3SH1 A;  1UW6 A;  4HFD A;  4ZRU A;  2BG9 A;  4X5T A;  5L4H A;  3WTK A;  4LMJ A;  5LXB A;  2XQ6 A;  3EAM A;  2Y54 A;  4QAA A;  3RIF A;  5AFJ A;  2BYQ A;  3RIA A;  3C79 A;  4HFB A;  4QH5 A;  5IUX A;  4DBM A;  5J5G A;  2XZ5 A;  2YME A;  3LSV A;  4UM3 S;  4AFT A;  2XQ3 A;  5FJV A;  2ZJU A;  3C84 A;  3TLU A;  2YKS A;  5AFH A;  2XQ7 A;  5AFL A;  5L47 A;  4UXU A;  4ZK4 A;  3ZDG A;  3WTM A;  3TLW A;  4Z90 A;  4UY2 A;  2WZY A;  4IL9 A;  4QH4 A;  5AFK A;  4BFQ A;  3UQ7 A;  3UU3 A;  5L4E A;  3UU8 A;  3U8M A;  2C9T A;  3T4M A;  4HFI A;  5HEG A;  4A97 A;  4IRE A;  5HEJ A;  2XNU A;  3WTJ A;  2ZJV A;  3PEO A;  3SIO A;  3UU6 A;  2BG9 E;  4XHE A;  4NZB A;  3WTL A;  3P50 A;  4ZZC A;  4ILC A;  4A98 A;  1I9B A;  4HFE A;  5AIN A;  3WIP A;  2UZ6 A;  3RHW A;  2QC1 B;  5AFM A;  3RQW A;  4ZZB A;  3UUB A;  5KZU A;  4B5D A;  2YN6 A;  4UM3 P;  3PMZ A;  4ILB A;  2X00 A;  4LML A;  4QAC A;  3GUA A;  5LG3 A;  4Z91 A;  5TVC A;  4ZJT A;  1UX2 A;  4TNW A;  2BR8 A; 
#chains in the Genus database with same CATH homology
 2XQ4 A;  2BG9 B;  5AFN A;  3EHZ A;  2BR7 A;  4LMK A;  4EZ1 A;  2XNT A;  2XQ5 A;  2XYS A;  2PGZ A;  2XNV A;  3UQ4 A;  2W8G A;  4QAB A;  4UM3 A;  5J5F A;  4WV9 A;  2BJ0 A;  5JME A;  4QH1 A;  1UV6 A;  5CO5 A;  2W8F A;  5BRX A;  3U8L A;  2Y58 A;  5BW2 A;  2VL0 A;  2YMD A;  3WTI A;  5J5I A;  2XQ8 A;  4HFC A;  4TWD A;  4HFH A;  3SQ9 A;  2WN9 A;  5CFB A;  2Y7Y A;  4D01 A;  4XK9 A;  5J0Z A;  3WTH A;  4AFH A;  4NPP A;  4FRR A;  3TLS A;  4COF A;  2X00 D;  4ZJS A;  4HQP A;  4ZR6 A;  3P4W A;  3RQU A;  3TLV A;  3UU4 A;  2BG9 C;  3JAE A;  5HEO A;  4IL4 A;  5HEU A;  3UU5 A;  4TNV A;  5BP0 A;  5J5H A;  2YOE A;  3TLT A;  4PIR A;  3ZDH A;  4ZK1 A;  2Y56 A;  3U8K A;  2WNC A;  2WNJ A;  2BYP A;  4ALX A;  3IGQ A;  5AFM B;  3WTO A;  5KE4 A;  5HCJ A;  2Y57 A;  4UM1 A;  4TWH A;  2PH9 A;  2XQ9 A;  3WTN A;  2XYT A;  2BYS A;  3RI5 A;  3U8J A;  3ZKR A;  2BYR A;  5SYO A;  5HEH A;  2WNL A;  4TWF A;  4BQT A;  2XQA A;  3JAF A;  3JAD A;  4AFG A;  2BYN A;  4ILA A;  2XZ6 A;  3U8N A;  3EI0 A;  5HCM A;  3SQ6 A;  4F8H A;  3SH1 A;  1UW6 A;  4HFD A;  4ZRU A;  2BG9 A;  4X5T A;  5L4H A;  3WTK A;  4LMJ A;  5LXB A;  2XQ6 A;  3EAM A;  2Y54 A;  4QAA A;  3RIF A;  5AFJ A;  2BYQ A;  3RIA A;  3C79 A;  4HFB A;  4QH5 A;  5IUX A;  4DBM A;  5J5G A;  2XZ5 A;  2YME A;  3LSV A;  4UM3 S;  4AFT A;  2XQ3 A;  5FJV A;  2ZJU A;  3C84 A;  3TLU A;  2YKS A;  5AFH A;  2XQ7 A;  5AFL A;  5L47 A;  4UXU A;  4ZK4 A;  3ZDG A;  3WTM A;  3TLW A;  4Z90 A;  4UY2 A;  2WZY A;  4IL9 A;  4QH4 A;  5AFK A;  4BFQ A;  3UQ7 A;  3UU3 A;  5L4E A;  3UU8 A;  3U8M A;  2C9T A;  3T4M A;  4HFI A;  5HEG A;  4A97 A;  4IRE A;  5HEJ A;  2XNU A;  3WTJ A;  2ZJV A;  3PEO A;  3SIO A;  3UU6 A;  2BG9 E;  4XHE A;  4NZB A;  3WTL A;  3P50 A;  4ZZC A;  4ILC A;  4A98 A;  1I9B A;  4HFE A;  5AIN A;  3WIP A;  2UZ6 A;  3RHW A;  2QC1 B;  5AFM A;  3RQW A;  4ZZB A;  3UUB A;  5KZU A;  4B5D A;  2YN6 A;  4UM3 P;  3PMZ A;  4ILB A;  2X00 A;  4LML A;  4QAC A;  3GUA A;  5LG3 A;  4Z91 A;  5TVC A;  4ZJT A;  1UX2 A;  4TNW A;  2BR8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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