4ZOJA

Methylsulfanyl-containing inhibitor bound in the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
345
structure length
341
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/transferase inhibitor
molecule keywords Anthranilate phosphoribosyltransferase
publication title Inhibitor bound in the active site of Mycobacterium tuberculosis anthranilate phosphoribosyltransferase (AnPRT; trpD).
rcsb
source organism Mycobacterium tuberculosis h37ra
total genus 119
structure length 341
sequence length 345
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2015-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4zojA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4zojA02
4OWSA 3QQSA 1VQUA 1ZYKA 4X59A 1BRWA 4OWQA 4IJ1A 3R6CA 4HKMA 4ZTVA 4X5BA 4ZOFA 2TPTA 4M0RA 4OWVA 2WK6A 3QR9A 4X5CA 4XR5A 5BO2A 4GTNA 5EY3A 5EP8A 5BYTA 5BNEA 4LHMA 2J0FA 3TWPA 1OTPA 4GIUA 4MUOA 5C1RA 4ZOKA 4YYYA 4GA5A 4GA6A 1KGZA 4YI7A 2DSJA 5C7SA 4EAFA 1AZYA 1UOUA 3QSAA 4GA4A 2BPQA 2WK5A 4GKMA 4YEKA 4N93A 3GBRA 4X5AA 1ZVWA 2ELCA 4ZOJA 4X5EA 3QS8A 2GVQA 4OWOA 3R88A 1GXBA 4X46A 4EADA 4X58A 4OWNA 1O17A 3H5QA 4OWUA 5BO3A 1ZXYA 4X5DA 1V8GA 3UU1A 4N5VA 1KHDA 4N8QA 5C2LA 4OWMA
chains in the Genus database with same CATH superfamily
1RF8B 4OWSA 3QQSA 1VQUA 1ZYKA 4X59A 1BRWA 4OWQA 4IJ1A 3R6CA 4HKMA 4ZTVA 4X5BA 4ZOFA 2TPTA 4M0RA 2WK6A 4OWVA 3QR9A 4X5CA 4XR5A 5BO2A 4GTNA 5EY3A 5EP8A 5BYTA 5BNEA 4LHMA 2J0FA 3TWPA 1OTPA 4GIUA 4MUOA 5C1RA 4ZOKA 4YYYA 4GA5A 4GA6A 1KGZA 4YI7A 1RRZA 2DSJA 5C7SA 4EAFA 1AZYA 1UOUA 3QSAA 4GA4A 2BPQA 2WK5A 4GKMA 4YEKA 4N93A 3GBRA 4X5AA 1ZVWA 2ELCA 4ZOJA 4X5EA 3QS8A 2GVQA 4OWOA 3R88A 1GXBA 4X46A 4EADA 4X58A 4OWNA 1O17A 3H5QA 4OWUA 5BO3A 1ZXYA 4X5DA 1V8GA 3UU1A 4N5VA 1KHDA 4F3FC 4N8QA 5C2LA 4OWMA
chains in the Genus database with same CATH topology
4OWSA 3QQSA 1VQUA 1ZYKA 4X59A 1BRWA 4OWQA 4IJ1A 3R6CA 4HKMA 4ZTVA 4X5BA 4ZOFA 2TPTA 4M0RA 4OWVA 2WK6A 3QR9A 4X5CA 4XR5A 5BO2A 4GTNA 5EY3A 5EP8A 5BYTA 5BNEA 4LHMA 2J0FA 3TWPA 1OTPA 4GIUA 4MUOA 5C1RA 4ZOKA 4YYYA 4GA5A 4GA6A 1KGZA 4YI7A 2DSJA 5C7SA 4EAFA 1AZYA 1UOUA 3QSAA 4GA4A 2BPQA 2WK5A 4GKMA 4YEKA 4N93A 3GBRA 4X5AA 1ZVWA 2ELCA 4ZOJA 4X5EA 3QS8A 2GVQA 4OWOA 3R88A 1GXBA 4X46A 4EADA 4X58A 4OWNA 1O17A 3H5QA 4OWUA 5BO3A 1ZXYA 4X5DA 1V8GA 3UU1A 4N5VA 1KHDA 4N8QA 5C2LA 4OWMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OWS A;  3QQS A;  1VQU A;  1ZYK A;  4X59 A;  1BRW A;  4OWQ A;  4IJ1 A;  3R6C A;  4HKM A;  4ZTV A;  4X5B A;  4ZOF A;  2TPT A;  4M0R A;  4OWV A;  2WK6 A;  3QR9 A;  4X5C A;  4XR5 A;  5BO2 A;  4GTN A;  5EY3 A;  5EP8 A;  5BYT A;  5BNE A;  4LHM A;  2J0F A;  3TWP A;  1OTP A;  4GIU A;  4MUO A;  5C1R A;  4ZOK A;  4YYY A;  4GA5 A;  4GA6 A;  1KGZ A;  4YI7 A;  2DSJ A;  5C7S A;  4EAF A;  1AZY A;  1UOU A;  3QSA A;  4GA4 A;  2BPQ A;  2WK5 A;  4GKM A;  4YEK A;  4N93 A;  3GBR A;  4X5A A;  1ZVW A;  2ELC A;  4ZOJ A;  4X5E A;  3QS8 A;  2GVQ A;  4OWO A;  3R88 A;  1GXB A;  4X46 A;  4EAD A;  4X58 A;  4OWN A;  1O17 A;  3H5Q A;  4OWU A;  5BO3 A;  1ZXY A;  4X5D A;  1V8G A;  3UU1 A;  4N5V A;  1KHD A;  4N8Q A;  5C2L A;  4OWM A; 
#chains in the Genus database with same CATH topology
 1RF8 B;  4OWS A;  3QQS A;  1VQU A;  1ZYK A;  4X59 A;  1BRW A;  4OWQ A;  4IJ1 A;  3R6C A;  4HKM A;  4ZTV A;  4X5B A;  4ZOF A;  2TPT A;  4M0R A;  2WK6 A;  4OWV A;  3QR9 A;  4X5C A;  4XR5 A;  5BO2 A;  4GTN A;  5EY3 A;  5EP8 A;  5BYT A;  5BNE A;  4LHM A;  2J0F A;  3TWP A;  1OTP A;  4GIU A;  4MUO A;  5C1R A;  4ZOK A;  4YYY A;  4GA5 A;  4GA6 A;  1KGZ A;  4YI7 A;  1RRZ A;  2DSJ A;  5C7S A;  4EAF A;  1AZY A;  1UOU A;  3QSA A;  4GA4 A;  2BPQ A;  2WK5 A;  4GKM A;  4YEK A;  4N93 A;  3GBR A;  4X5A A;  1ZVW A;  2ELC A;  4ZOJ A;  4X5E A;  3QS8 A;  2GVQ A;  4OWO A;  3R88 A;  1GXB A;  4X46 A;  4EAD A;  4X58 A;  4OWN A;  1O17 A;  3H5Q A;  4OWU A;  5BO3 A;  1ZXY A;  4X5D A;  1V8G A;  3UU1 A;  4N5V A;  1KHD A;  4F3F C;  4N8Q A;  5C2L A;  4OWM A; 
#chains in the Genus database with same CATH homology
 4OWS A;  3QQS A;  1VQU A;  1ZYK A;  4X59 A;  1BRW A;  4OWQ A;  4IJ1 A;  3R6C A;  4HKM A;  4ZTV A;  4X5B A;  4ZOF A;  2TPT A;  4M0R A;  4OWV A;  2WK6 A;  3QR9 A;  4X5C A;  4XR5 A;  5BO2 A;  4GTN A;  5EY3 A;  5EP8 A;  5BYT A;  5BNE A;  4LHM A;  2J0F A;  3TWP A;  1OTP A;  4GIU A;  4MUO A;  5C1R A;  4ZOK A;  4YYY A;  4GA5 A;  4GA6 A;  1KGZ A;  4YI7 A;  2DSJ A;  5C7S A;  4EAF A;  1AZY A;  1UOU A;  3QSA A;  4GA4 A;  2BPQ A;  2WK5 A;  4GKM A;  4YEK A;  4N93 A;  3GBR A;  4X5A A;  1ZVW A;  2ELC A;  4ZOJ A;  4X5E A;  3QS8 A;  2GVQ A;  4OWO A;  3R88 A;  1GXB A;  4X46 A;  4EAD A;  4X58 A;  4OWN A;  1O17 A;  3H5Q A;  4OWU A;  5BO3 A;  1ZXY A;  4X5D A;  1V8G A;  3UU1 A;  4N5V A;  1KHD A;  4N8Q A;  5C2L A;  4OWM A; 
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similar chains in the Genus database (?% sequence similarity)
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