4ZOJA

Methylsulfanyl-containing inhibitor bound in the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
345
structure length
341
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/transferase inhibitor
molecule keywords Anthranilate phosphoribosyltransferase
publication title Inhibitor bound in the active site of Mycobacterium tuberculosis anthranilate phosphoribosyltransferase (AnPRT; trpD).
rcsb
source organism Mycobacterium tuberculosis h37ra
total genus 119
structure length 341
sequence length 345
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2015-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4zojA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4zojA02
4MUOA 4GTNA 4YI7A 1ZYKA 4X59A 4X5DA 4XR5A 1ZXYA 3QSAA 4N5VA 4OWMA 4OWSA 3QR9A 2TPTA 1GXBA 1OTPA 1ZVWA 3TWPA 5EY3A 3R88A 4OWNA 4GA6A 4N93A 4YYYA 4OWUA 4EADA 5C7SA 4ZOFA 4LHMA 4IJ1A 4X5CA 3UU1A 4HKMA 4N8QA 2BPQA 3H5QA 4M0RA 4X5BA 2WK5A 4GKMA 4OWQA 4X58A 1KGZA 4YEKA 1VQUA 4ZOJA 4ZTVA 2ELCA 2DSJA 5EP8A 5BO3A 5C2LA 1AZYA 1V8GA 4EAFA 5BYTA 2GVQA 4ZOKA 4X46A 4X5EA 4OWVA 1BRWA 5C1RA 2J0FA 4OWOA 5BO2A 3QS8A 3R6CA 1KHDA 1O17A 4GIUA 4GA5A 4X5AA 2WK6A 3GBRA 3QQSA 1UOUA 5BNEA 4GA4A
chains in the Genus database with same CATH superfamily
4MUOA 4GTNA 4YI7A 1ZYKA 4X59A 4X5DA 4XR5A 1ZXYA 3QSAA 4N5VA 4OWMA 4OWSA 3QR9A 2TPTA 1GXBA 1OTPA 1ZVWA 3TWPA 5EY3A 3R88A 4OWNA 4GA6A 4N93A 4YYYA 4OWUA 4EADA 5C7SA 4ZOFA 4LHMA 1RRZA 4IJ1A 4X5CA 3UU1A 4HKMA 4N8QA 2BPQA 3H5QA 4M0RA 4X5BA 2WK5A 4GKMA 4OWQA 4X58A 1KGZA 1RF8B 4YEKA 1VQUA 4F3FC 4ZOJA 4ZTVA 2ELCA 2DSJA 5EP8A 5BO3A 5C2LA 1AZYA 1V8GA 4EAFA 5BYTA 2GVQA 4ZOKA 4X46A 4X5EA 4OWVA 1BRWA 5C1RA 2J0FA 4OWOA 5BO2A 3QS8A 3R6CA 1KHDA 1O17A 4GIUA 4GA5A 4X5AA 2WK6A 3GBRA 3QQSA 1UOUA 5BNEA 4GA4A
chains in the Genus database with same CATH topology
4MUOA 4GTNA 4YI7A 1ZYKA 4X59A 4X5DA 4XR5A 1ZXYA 3QSAA 4N5VA 4OWMA 4OWSA 3QR9A 2TPTA 1GXBA 1OTPA 1ZVWA 3TWPA 5EY3A 3R88A 4OWNA 4GA6A 4N93A 4YYYA 4OWUA 4EADA 5C7SA 4ZOFA 4LHMA 4IJ1A 4X5CA 3UU1A 4HKMA 4N8QA 2BPQA 3H5QA 4M0RA 4X5BA 2WK5A 4GKMA 4OWQA 4X58A 1KGZA 4YEKA 1VQUA 4ZOJA 4ZTVA 2ELCA 2DSJA 5EP8A 5BO3A 5C2LA 1AZYA 1V8GA 4EAFA 5BYTA 2GVQA 4ZOKA 4X46A 4X5EA 4OWVA 1BRWA 5C1RA 2J0FA 4OWOA 5BO2A 3QS8A 3R6CA 1KHDA 1O17A 4GIUA 4GA5A 4X5AA 2WK6A 3GBRA 3QQSA 1UOUA 5BNEA 4GA4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MUO A;  4GTN A;  4YI7 A;  1ZYK A;  4X59 A;  4X5D A;  4XR5 A;  1ZXY A;  3QSA A;  4N5V A;  4OWM A;  4OWS A;  3QR9 A;  2TPT A;  1GXB A;  1OTP A;  1ZVW A;  3TWP A;  5EY3 A;  3R88 A;  4OWN A;  4GA6 A;  4N93 A;  4YYY A;  4OWU A;  4EAD A;  5C7S A;  4ZOF A;  4LHM A;  4IJ1 A;  4X5C A;  3UU1 A;  4HKM A;  4N8Q A;  2BPQ A;  3H5Q A;  4M0R A;  4X5B A;  2WK5 A;  4GKM A;  4OWQ A;  4X58 A;  1KGZ A;  4YEK A;  1VQU A;  4ZOJ A;  4ZTV A;  2ELC A;  2DSJ A;  5EP8 A;  5BO3 A;  5C2L A;  1AZY A;  1V8G A;  4EAF A;  5BYT A;  2GVQ A;  4ZOK A;  4X46 A;  4X5E A;  4OWV A;  1BRW A;  5C1R A;  2J0F A;  4OWO A;  5BO2 A;  3QS8 A;  3R6C A;  1KHD A;  1O17 A;  4GIU A;  4GA5 A;  4X5A A;  2WK6 A;  3GBR A;  3QQS A;  1UOU A;  5BNE A;  4GA4 A; 
#chains in the Genus database with same CATH topology
 4MUO A;  4GTN A;  4YI7 A;  1ZYK A;  4X59 A;  4X5D A;  4XR5 A;  1ZXY A;  3QSA A;  4N5V A;  4OWM A;  4OWS A;  3QR9 A;  2TPT A;  1GXB A;  1OTP A;  1ZVW A;  3TWP A;  5EY3 A;  3R88 A;  4OWN A;  4GA6 A;  4N93 A;  4YYY A;  4OWU A;  4EAD A;  5C7S A;  4ZOF A;  4LHM A;  1RRZ A;  4IJ1 A;  4X5C A;  3UU1 A;  4HKM A;  4N8Q A;  2BPQ A;  3H5Q A;  4M0R A;  4X5B A;  2WK5 A;  4GKM A;  4OWQ A;  4X58 A;  1KGZ A;  1RF8 B;  4YEK A;  1VQU A;  4F3F C;  4ZOJ A;  4ZTV A;  2ELC A;  2DSJ A;  5EP8 A;  5BO3 A;  5C2L A;  1AZY A;  1V8G A;  4EAF A;  5BYT A;  2GVQ A;  4ZOK A;  4X46 A;  4X5E A;  4OWV A;  1BRW A;  5C1R A;  2J0F A;  4OWO A;  5BO2 A;  3QS8 A;  3R6C A;  1KHD A;  1O17 A;  4GIU A;  4GA5 A;  4X5A A;  2WK6 A;  3GBR A;  3QQS A;  1UOU A;  5BNE A;  4GA4 A; 
#chains in the Genus database with same CATH homology
 4MUO A;  4GTN A;  4YI7 A;  1ZYK A;  4X59 A;  4X5D A;  4XR5 A;  1ZXY A;  3QSA A;  4N5V A;  4OWM A;  4OWS A;  3QR9 A;  2TPT A;  1GXB A;  1OTP A;  1ZVW A;  3TWP A;  5EY3 A;  3R88 A;  4OWN A;  4GA6 A;  4N93 A;  4YYY A;  4OWU A;  4EAD A;  5C7S A;  4ZOF A;  4LHM A;  4IJ1 A;  4X5C A;  3UU1 A;  4HKM A;  4N8Q A;  2BPQ A;  3H5Q A;  4M0R A;  4X5B A;  2WK5 A;  4GKM A;  4OWQ A;  4X58 A;  1KGZ A;  4YEK A;  1VQU A;  4ZOJ A;  4ZTV A;  2ELC A;  2DSJ A;  5EP8 A;  5BO3 A;  5C2L A;  1AZY A;  1V8G A;  4EAF A;  5BYT A;  2GVQ A;  4ZOK A;  4X46 A;  4X5E A;  4OWV A;  1BRW A;  5C1R A;  2J0F A;  4OWO A;  5BO2 A;  3QS8 A;  3R6C A;  1KHD A;  1O17 A;  4GIU A;  4GA5 A;  4X5A A;  2WK6 A;  3GBR A;  3QQS A;  1UOU A;  5BNE A;  4GA4 A; 
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similar chains in the Genus database (?% sequence similarity)
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