4ZOKA

Methylsulfonyl-containing inhibitor bound in the substrate capture site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
Total Genus 113
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
113
sequence length
345
structure length
342
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/transferase inhibitor
molecule keywords Anthranilate phosphoribosyltransferase
publication title Inhibitor bound in the active site of Mycobacterium tuberculosis anthranilate phosphoribosyltransferase (AnPRT; trpD).
rcsb
source organism Mycobacterium tuberculosis h37ra
total genus 113
structure length 342
sequence length 345
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2015-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4zokA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4zokA02
4EADA 5BNEA 1KHDA 4GA6A 1BRWA 4HKMA 4MUOA 3QSAA 2J0FA 2BPQA 4OWUA 4GA5A 4GIUA 1ZXYA 4GTNA 1O17A 1ZVWA 5BO3A 4YEKA 3H5QA 2WK5A 4OWOA 4X5EA 1UOUA 4X59A 4N5VA 3GBRA 1V8GA 5EP8A 4LHMA 2WK6A 3QR9A 4X5BA 4XR5A 3TWPA 2ELCA 4X5DA 4GKMA 5EY3A 1GXBA 2TPTA 4YYYA 4ZTVA 4ZOFA 3R6CA 3UU1A 2DSJA 4IJ1A 4OWVA 1OTPA 4YI7A 1KGZA 4X5CA 4ZOJA 1VQUA 1ZYKA 5BYTA 5C1RA 5BO2A 4X5AA 4OWMA 5C7SA 2GVQA 3QQSA 3R88A 4N93A 1AZYA 3QS8A 4OWQA 4X58A 4OWSA 4X46A 4ZOKA 4M0RA 4OWNA 4N8QA 5C2LA 4GA4A 4EAFA
chains in the Genus database with same CATH superfamily
4EADA 5BNEA 1KHDA 4GA6A 1BRWA 4HKMA 4MUOA 3QSAA 2J0FA 2BPQA 4GA5A 4OWUA 4GIUA 1ZXYA 4GTNA 1O17A 1ZVWA 5BO3A 4YEKA 3H5QA 2WK5A 4OWOA 4X5EA 1UOUA 4X59A 4N5VA 3GBRA 1V8GA 5EP8A 4F3FC 4LHMA 2WK6A 3QR9A 4X5BA 4XR5A 3TWPA 2ELCA 4X5DA 4GKMA 5EY3A 1GXBA 2TPTA 4YYYA 1RF8B 1RRZA 4ZTVA 4ZOFA 3R6CA 3UU1A 2DSJA 4IJ1A 4OWVA 1OTPA 4YI7A 1KGZA 4X5CA 4ZOJA 1VQUA 1ZYKA 5BYTA 5C1RA 5BO2A 4X5AA 4OWMA 5C7SA 2GVQA 3QQSA 3R88A 4N93A 1AZYA 3QS8A 4OWQA 4X58A 4OWSA 4X46A 4ZOKA 4M0RA 4OWNA 4N8QA 5C2LA 4GA4A 4EAFA
chains in the Genus database with same CATH topology
4EADA 5BNEA 1KHDA 4GA6A 1BRWA 4HKMA 4MUOA 3QSAA 2J0FA 2BPQA 4OWUA 4GA5A 4GIUA 1ZXYA 4GTNA 1O17A 1ZVWA 5BO3A 4YEKA 3H5QA 2WK5A 4OWOA 4X5EA 1UOUA 4X59A 4N5VA 3GBRA 1V8GA 5EP8A 4LHMA 2WK6A 3QR9A 4X5BA 4XR5A 3TWPA 2ELCA 4X5DA 4GKMA 5EY3A 1GXBA 2TPTA 4YYYA 4ZTVA 4ZOFA 3R6CA 3UU1A 2DSJA 4IJ1A 4OWVA 1OTPA 4YI7A 1KGZA 4X5CA 4ZOJA 1VQUA 1ZYKA 5BYTA 5C1RA 5BO2A 4X5AA 4OWMA 5C7SA 2GVQA 3QQSA 3R88A 4N93A 1AZYA 3QS8A 4OWQA 4X58A 4OWSA 4X46A 4ZOKA 4M0RA 4OWNA 4N8QA 5C2LA 4GA4A 4EAFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EAD A;  5BNE A;  1KHD A;  4GA6 A;  1BRW A;  4HKM A;  4MUO A;  3QSA A;  2J0F A;  2BPQ A;  4OWU A;  4GA5 A;  4GIU A;  1ZXY A;  4GTN A;  1O17 A;  1ZVW A;  5BO3 A;  4YEK A;  3H5Q A;  2WK5 A;  4OWO A;  4X5E A;  1UOU A;  4X59 A;  4N5V A;  3GBR A;  1V8G A;  5EP8 A;  4LHM A;  2WK6 A;  3QR9 A;  4X5B A;  4XR5 A;  3TWP A;  2ELC A;  4X5D A;  4GKM A;  5EY3 A;  1GXB A;  2TPT A;  4YYY A;  4ZTV A;  4ZOF A;  3R6C A;  3UU1 A;  2DSJ A;  4IJ1 A;  4OWV A;  1OTP A;  4YI7 A;  1KGZ A;  4X5C A;  4ZOJ A;  1VQU A;  1ZYK A;  5BYT A;  5C1R A;  5BO2 A;  4X5A A;  4OWM A;  5C7S A;  2GVQ A;  3QQS A;  3R88 A;  4N93 A;  1AZY A;  3QS8 A;  4OWQ A;  4X58 A;  4OWS A;  4X46 A;  4ZOK A;  4M0R A;  4OWN A;  4N8Q A;  5C2L A;  4GA4 A;  4EAF A; 
#chains in the Genus database with same CATH topology
 4EAD A;  5BNE A;  1KHD A;  4GA6 A;  1BRW A;  4HKM A;  4MUO A;  3QSA A;  2J0F A;  2BPQ A;  4GA5 A;  4OWU A;  4GIU A;  1ZXY A;  4GTN A;  1O17 A;  1ZVW A;  5BO3 A;  4YEK A;  3H5Q A;  2WK5 A;  4OWO A;  4X5E A;  1UOU A;  4X59 A;  4N5V A;  3GBR A;  1V8G A;  5EP8 A;  4F3F C;  4LHM A;  2WK6 A;  3QR9 A;  4X5B A;  4XR5 A;  3TWP A;  2ELC A;  4X5D A;  4GKM A;  5EY3 A;  1GXB A;  2TPT A;  4YYY A;  1RF8 B;  1RRZ A;  4ZTV A;  4ZOF A;  3R6C A;  3UU1 A;  2DSJ A;  4IJ1 A;  4OWV A;  1OTP A;  4YI7 A;  1KGZ A;  4X5C A;  4ZOJ A;  1VQU A;  1ZYK A;  5BYT A;  5C1R A;  5BO2 A;  4X5A A;  4OWM A;  5C7S A;  2GVQ A;  3QQS A;  3R88 A;  4N93 A;  1AZY A;  3QS8 A;  4OWQ A;  4X58 A;  4OWS A;  4X46 A;  4ZOK A;  4M0R A;  4OWN A;  4N8Q A;  5C2L A;  4GA4 A;  4EAF A; 
#chains in the Genus database with same CATH homology
 4EAD A;  5BNE A;  1KHD A;  4GA6 A;  1BRW A;  4HKM A;  4MUO A;  3QSA A;  2J0F A;  2BPQ A;  4OWU A;  4GA5 A;  4GIU A;  1ZXY A;  4GTN A;  1O17 A;  1ZVW A;  5BO3 A;  4YEK A;  3H5Q A;  2WK5 A;  4OWO A;  4X5E A;  1UOU A;  4X59 A;  4N5V A;  3GBR A;  1V8G A;  5EP8 A;  4LHM A;  2WK6 A;  3QR9 A;  4X5B A;  4XR5 A;  3TWP A;  2ELC A;  4X5D A;  4GKM A;  5EY3 A;  1GXB A;  2TPT A;  4YYY A;  4ZTV A;  4ZOF A;  3R6C A;  3UU1 A;  2DSJ A;  4IJ1 A;  4OWV A;  1OTP A;  4YI7 A;  1KGZ A;  4X5C A;  4ZOJ A;  1VQU A;  1ZYK A;  5BYT A;  5C1R A;  5BO2 A;  4X5A A;  4OWM A;  5C7S A;  2GVQ A;  3QQS A;  3R88 A;  4N93 A;  1AZY A;  3QS8 A;  4OWQ A;  4X58 A;  4OWS A;  4X46 A;  4ZOK A;  4M0R A;  4OWN A;  4N8Q A;  5C2L A;  4GA4 A;  4EAF A; 
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