4ZR6A

Lymnaea stagnalis acetylcholine binding protein in complex with 3-[(4e)-4-[(3-methylimidazol-4-yl)methylene]-2,3-dihydropyrrol-5-yl]pyridine
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
203
structure length
195
Chain Sequence
DRADILYNIRQTSRPDVIPTRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Acetylcholine binding protein
molecule keywords Acetylcholine-binding protein
publication title Structure-guided design and analysis of arylidene anabaseines and myosmines
rcsb
source organism Lymnaea stagnalis
total genus 37
structure length 195
sequence length 203
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2015-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4zr6A00
4HFIA 3UU8A 3TLTA 3TLUA 3PMZA 3C84A 5HEGA 2ZJUA 3U8KA 2XNUA 4TWDA 2C9TA 4HQPA 2XZ6A 3C79A 2YMEA 3EI0A 4ZJSA 5LG3A 5HEOA 2BG9E 4Z90A 3WIPA 3WTOA 3RIAA 3WTHA 4HFDA 3UQ4A 2PGZA 3UU3A 4UM3A 3U8JA 5BP0A 4HFBA 4IL9A 5HCJA 4PIRA 3SIOA 2PH9A 2BYSA 2UZ6A 3ZDGA 2YKSA 4WV9A 2ZJVA 2BG9A 4HFHA 5SYOA 5AFJA 1UW6A 2Y58A 5AFLA 3UUBA 4A97A 4ILAA 4AFHA 2XNTA 3PEOA 1UV6A 4B5DA 4COFA 2BJ0A 2WNLA 4TNVA 5L4HA 5HEUA 3RHWA 3JAFA 4FRRA 4LMJA 5J5HA 4XHEA 3EAMA 4ZZCA 2BYPA 2XYSA 5CFBA 2W8GA 4QACA 4UY2A 4BQTA 5BW2A 2XYTA 3UU6A 4UM3S 4QABA 4UM3P 5CO5A 3WTLA 2X00A 5TVCA 5J0ZA 2XQ7A 3EHZA 2Y54A 5HEJA 2BYNA 2BR8A 2Y56A 3ZDHA 1I9BA 3SQ6A 3T4MA 2X00D 3JADA 3WTJA 2Y7YA 5L4EA 5KZUA 2QC1B 4QH5A 4EZ1A 2WNCA 2BG9C 5BRXA 3TLVA 1UX2A 5AINA 5JMEA 4ALXA 3RQUA 2BR7A 3SH1A 2XQ6A 4ILBA 4QH1A 3RIFA 2YOEA 4F8HA 4UXUA 5J5IA 5AFMB 4ZR6A 4XK9A 2VL0A 2XQ3A 5L47A 2XQAA 4AFGA 3GUAA 4HFCA 5AFHA 4HFEA 3RQWA 3WTMA 5HCMA 4ZZBA 4Z91A 3IGQA 4ZJTA 4ZK1A 3LSVA 3TLWA 2XQ5A 4X5TA 5IUXA 4NPPA 5J5GA 2WN9A 5LXBA 2YN6A 3P50A 2WZYA 4QH4A 4AFTA 3UU4A 3WTNA 2YMDA 4ILCA 3P4WA 5AFMA 3ZKRA 5J5FA 4IREA 3SQ9A 3RI5A 2XQ4A 3U8LA 5FJVA 3UU5A 3UQ7A 2XQ9A 4ZK4A 4LMKA 4ZRUA 4DBMA 2Y57A 2W8FA 3U8MA 4D01A 4A98A 5KE4A 2XQ8A 4UM1A 2BYRA 4LMLA 2BYQA 3JAEA 4TNWA 3TLSA 3U8NA 3WTIA 5AFKA 2XZ5A 2WNJA 5AFNA 4QAAA 4TWHA 4TWFA 4NZBA 5HEHA 4BFQA 2BG9B 2XNVA 4IL4A 3WTKA
chains in the Genus database with same CATH superfamily
4HFIA 3UU8A 3TLTA 3TLUA 3PMZA 3C84A 5HEGA 2ZJUA 3U8KA 2XNUA 4TWDA 2C9TA 4HQPA 2XZ6A 3C79A 2YMEA 3EI0A 4ZJSA 5LG3A 5HEOA 2BG9E 4Z90A 3WIPA 3WTOA 3RIAA 3WTHA 4HFDA 3UQ4A 2PGZA 3UU3A 4UM3A 3U8JA 5BP0A 4HFBA 4IL9A 5HCJA 4PIRA 3SIOA 2PH9A 2BYSA 2UZ6A 3ZDGA 2YKSA 4WV9A 2ZJVA 2BG9A 4HFHA 5SYOA 5AFJA 1UW6A 2Y58A 5AFLA 3UUBA 4A97A 4ILAA 4AFHA 2XNTA 3PEOA 1UV6A 4B5DA 4COFA 2BJ0A 2WNLA 4TNVA 5L4HA 5HEUA 3RHWA 3JAFA 4FRRA 4LMJA 5J5HA 4XHEA 3EAMA 4ZZCA 2BYPA 2XYSA 5CFBA 2W8GA 4QACA 4UY2A 4BQTA 5BW2A 2XYTA 3UU6A 4UM3S 4QABA 4UM3P 5CO5A 3WTLA 2X00A 5TVCA 5J0ZA 2XQ7A 3EHZA 2Y54A 5HEJA 2BYNA 2BR8A 2Y56A 3ZDHA 1I9BA 3SQ6A 3T4MA 2X00D 3JADA 3WTJA 2Y7YA 5L4EA 5KZUA 2QC1B 4QH5A 4EZ1A 2WNCA 2BG9C 5BRXA 3TLVA 1UX2A 5AINA 5JMEA 4ALXA 3RQUA 2BR7A 3SH1A 2XQ6A 4ILBA 4QH1A 3RIFA 2YOEA 4F8HA 4UXUA 5J5IA 5AFMB 4ZR6A 4XK9A 2VL0A 2XQ3A 5L47A 2XQAA 4AFGA 3GUAA 4HFCA 5AFHA 4HFEA 3RQWA 3WTMA 5HCMA 4ZZBA 4Z91A 3IGQA 4ZJTA 4ZK1A 3LSVA 3TLWA 2XQ5A 4X5TA 5IUXA 4NPPA 5J5GA 2WN9A 5LXBA 2YN6A 3P50A 2WZYA 4QH4A 4AFTA 3UU4A 3WTNA 2YMDA 4ILCA 3P4WA 5AFMA 3ZKRA 5J5FA 4IREA 3SQ9A 3RI5A 2XQ4A 3U8LA 5FJVA 3UU5A 3UQ7A 2XQ9A 4ZK4A 4LMKA 4ZRUA 4DBMA 2Y57A 2W8FA 3U8MA 4D01A 4A98A 5KE4A 2XQ8A 4UM1A 2BYRA 4LMLA 2BYQA 3JAEA 4TNWA 3TLSA 3U8NA 3WTIA 5AFKA 2XZ5A 2WNJA 5AFNA 4QAAA 4TWHA 4TWFA 4NZBA 5HEHA 4BFQA 2BG9B 2XNVA 4IL4A 3WTKA
chains in the Genus database with same CATH topology
4HFIA 3UU8A 3TLTA 3TLUA 3PMZA 3C84A 5HEGA 2ZJUA 3U8KA 2XNUA 4TWDA 2C9TA 4HQPA 2XZ6A 3C79A 2YMEA 3EI0A 4ZJSA 5LG3A 5HEOA 2BG9E 4Z90A 3WIPA 3WTOA 3RIAA 3WTHA 4HFDA 3UQ4A 2PGZA 3UU3A 4UM3A 3U8JA 5BP0A 4HFBA 4IL9A 5HCJA 4PIRA 3SIOA 2PH9A 2BYSA 2UZ6A 3ZDGA 2YKSA 4WV9A 2ZJVA 2BG9A 4HFHA 5SYOA 5AFJA 1UW6A 2Y58A 5AFLA 3UUBA 4A97A 4ILAA 4AFHA 2XNTA 3PEOA 1UV6A 4B5DA 4COFA 2BJ0A 2WNLA 4TNVA 5L4HA 5HEUA 3RHWA 3JAFA 4FRRA 4LMJA 5J5HA 4XHEA 3EAMA 4ZZCA 2BYPA 2XYSA 5CFBA 2W8GA 4QACA 4UY2A 4BQTA 5BW2A 2XYTA 3UU6A 4UM3S 4QABA 4UM3P 5CO5A 3WTLA 2X00A 5TVCA 5J0ZA 2XQ7A 3EHZA 2Y54A 5HEJA 2BYNA 2BR8A 2Y56A 3ZDHA 1I9BA 3SQ6A 3T4MA 2X00D 3JADA 3WTJA 2Y7YA 5L4EA 5KZUA 2QC1B 4QH5A 4EZ1A 2WNCA 2BG9C 5BRXA 3TLVA 1UX2A 5AINA 5JMEA 4ALXA 3RQUA 2BR7A 3SH1A 2XQ6A 4ILBA 4QH1A 3RIFA 2YOEA 4F8HA 4UXUA 5J5IA 5AFMB 4ZR6A 4XK9A 2VL0A 2XQ3A 5L47A 2XQAA 4AFGA 3GUAA 4HFCA 5AFHA 4HFEA 3RQWA 3WTMA 5HCMA 4ZZBA 4Z91A 3IGQA 4ZJTA 4ZK1A 3LSVA 3TLWA 2XQ5A 4X5TA 5IUXA 4NPPA 5J5GA 2WN9A 5LXBA 2YN6A 3P50A 2WZYA 4QH4A 4AFTA 3UU4A 3WTNA 2YMDA 4ILCA 3P4WA 5AFMA 3ZKRA 5J5FA 4IREA 3SQ9A 3RI5A 2XQ4A 3U8LA 5FJVA 3UU5A 3UQ7A 2XQ9A 4ZK4A 4LMKA 4ZRUA 4DBMA 2Y57A 2W8FA 3U8MA 4D01A 4A98A 5KE4A 2XQ8A 4UM1A 2BYRA 4LMLA 2BYQA 3JAEA 4TNWA 3TLSA 3U8NA 3WTIA 5AFKA 2XZ5A 2WNJA 5AFNA 4QAAA 4TWHA 4TWFA 4NZBA 5HEHA 4BFQA 2BG9B 2XNVA 4IL4A 3WTKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4HFI A;  3UU8 A;  3TLT A;  3TLU A;  3PMZ A;  3C84 A;  5HEG A;  2ZJU A;  3U8K A;  2XNU A;  4TWD A;  2C9T A;  4HQP A;  2XZ6 A;  3C79 A;  2YME A;  3EI0 A;  4ZJS A;  5LG3 A;  5HEO A;  2BG9 E;  4Z90 A;  3WIP A;  3WTO A;  3RIA A;  3WTH A;  4HFD A;  3UQ4 A;  2PGZ A;  3UU3 A;  4UM3 A;  3U8J A;  5BP0 A;  4HFB A;  4IL9 A;  5HCJ A;  4PIR A;  3SIO A;  2PH9 A;  2BYS A;  2UZ6 A;  3ZDG A;  2YKS A;  4WV9 A;  2ZJV A;  2BG9 A;  4HFH A;  5SYO A;  5AFJ A;  1UW6 A;  2Y58 A;  5AFL A;  3UUB A;  4A97 A;  4ILA A;  4AFH A;  2XNT A;  3PEO A;  1UV6 A;  4B5D A;  4COF A;  2BJ0 A;  2WNL A;  4TNV A;  5L4H A;  5HEU A;  3RHW A;  3JAF A;  4FRR A;  4LMJ A;  5J5H A;  4XHE A;  3EAM A;  4ZZC A;  2BYP A;  2XYS A;  5CFB A;  2W8G A;  4QAC A;  4UY2 A;  4BQT A;  5BW2 A;  2XYT A;  3UU6 A;  4UM3 S;  4QAB A;  4UM3 P;  5CO5 A;  3WTL A;  2X00 A;  5TVC A;  5J0Z A;  2XQ7 A;  3EHZ A;  2Y54 A;  5HEJ A;  2BYN A;  2BR8 A;  2Y56 A;  3ZDH A;  1I9B A;  3SQ6 A;  3T4M A;  2X00 D;  3JAD A;  3WTJ A;  2Y7Y A;  5L4E A;  5KZU A;  2QC1 B;  4QH5 A;  4EZ1 A;  2WNC A;  2BG9 C;  5BRX A;  3TLV A;  1UX2 A;  5AIN A;  5JME A;  4ALX A;  3RQU A;  2BR7 A;  3SH1 A;  2XQ6 A;  4ILB A;  4QH1 A;  3RIF A;  2YOE A;  4F8H A;  4UXU A;  5J5I A;  5AFM B;  4ZR6 A;  4XK9 A;  2VL0 A;  2XQ3 A;  5L47 A;  2XQA A;  4AFG A;  3GUA A;  4HFC A;  5AFH A;  4HFE A;  3RQW A;  3WTM A;  5HCM A;  4ZZB A;  4Z91 A;  3IGQ A;  4ZJT A;  4ZK1 A;  3LSV A;  3TLW A;  2XQ5 A;  4X5T A;  5IUX A;  4NPP A;  5J5G A;  2WN9 A;  5LXB A;  2YN6 A;  3P50 A;  2WZY A;  4QH4 A;  4AFT A;  3UU4 A;  3WTN A;  2YMD A;  4ILC A;  3P4W A;  5AFM A;  3ZKR A;  5J5F A;  4IRE A;  3SQ9 A;  3RI5 A;  2XQ4 A;  3U8L A;  5FJV A;  3UU5 A;  3UQ7 A;  2XQ9 A;  4ZK4 A;  4LMK A;  4ZRU A;  4DBM A;  2Y57 A;  2W8F A;  3U8M A;  4D01 A;  4A98 A;  5KE4 A;  2XQ8 A;  4UM1 A;  2BYR A;  4LML A;  2BYQ A;  3JAE A;  4TNW A;  3TLS A;  3U8N A;  3WTI A;  5AFK A;  2XZ5 A;  2WNJ A;  5AFN A;  4QAA A;  4TWH A;  4TWF A;  4NZB A;  5HEH A;  4BFQ A;  2BG9 B;  2XNV A;  4IL4 A;  3WTK A; 
#chains in the Genus database with same CATH topology
 4HFI A;  3UU8 A;  3TLT A;  3TLU A;  3PMZ A;  3C84 A;  5HEG A;  2ZJU A;  3U8K A;  2XNU A;  4TWD A;  2C9T A;  4HQP A;  2XZ6 A;  3C79 A;  2YME A;  3EI0 A;  4ZJS A;  5LG3 A;  5HEO A;  2BG9 E;  4Z90 A;  3WIP A;  3WTO A;  3RIA A;  3WTH A;  4HFD A;  3UQ4 A;  2PGZ A;  3UU3 A;  4UM3 A;  3U8J A;  5BP0 A;  4HFB A;  4IL9 A;  5HCJ A;  4PIR A;  3SIO A;  2PH9 A;  2BYS A;  2UZ6 A;  3ZDG A;  2YKS A;  4WV9 A;  2ZJV A;  2BG9 A;  4HFH A;  5SYO A;  5AFJ A;  1UW6 A;  2Y58 A;  5AFL A;  3UUB A;  4A97 A;  4ILA A;  4AFH A;  2XNT A;  3PEO A;  1UV6 A;  4B5D A;  4COF A;  2BJ0 A;  2WNL A;  4TNV A;  5L4H A;  5HEU A;  3RHW A;  3JAF A;  4FRR A;  4LMJ A;  5J5H A;  4XHE A;  3EAM A;  4ZZC A;  2BYP A;  2XYS A;  5CFB A;  2W8G A;  4QAC A;  4UY2 A;  4BQT A;  5BW2 A;  2XYT A;  3UU6 A;  4UM3 S;  4QAB A;  4UM3 P;  5CO5 A;  3WTL A;  2X00 A;  5TVC A;  5J0Z A;  2XQ7 A;  3EHZ A;  2Y54 A;  5HEJ A;  2BYN A;  2BR8 A;  2Y56 A;  3ZDH A;  1I9B A;  3SQ6 A;  3T4M A;  2X00 D;  3JAD A;  3WTJ A;  2Y7Y A;  5L4E A;  5KZU A;  2QC1 B;  4QH5 A;  4EZ1 A;  2WNC A;  2BG9 C;  5BRX A;  3TLV A;  1UX2 A;  5AIN A;  5JME A;  4ALX A;  3RQU A;  2BR7 A;  3SH1 A;  2XQ6 A;  4ILB A;  4QH1 A;  3RIF A;  2YOE A;  4F8H A;  4UXU A;  5J5I A;  5AFM B;  4ZR6 A;  4XK9 A;  2VL0 A;  2XQ3 A;  5L47 A;  2XQA A;  4AFG A;  3GUA A;  4HFC A;  5AFH A;  4HFE A;  3RQW A;  3WTM A;  5HCM A;  4ZZB A;  4Z91 A;  3IGQ A;  4ZJT A;  4ZK1 A;  3LSV A;  3TLW A;  2XQ5 A;  4X5T A;  5IUX A;  4NPP A;  5J5G A;  2WN9 A;  5LXB A;  2YN6 A;  3P50 A;  2WZY A;  4QH4 A;  4AFT A;  3UU4 A;  3WTN A;  2YMD A;  4ILC A;  3P4W A;  5AFM A;  3ZKR A;  5J5F A;  4IRE A;  3SQ9 A;  3RI5 A;  2XQ4 A;  3U8L A;  5FJV A;  3UU5 A;  3UQ7 A;  2XQ9 A;  4ZK4 A;  4LMK A;  4ZRU A;  4DBM A;  2Y57 A;  2W8F A;  3U8M A;  4D01 A;  4A98 A;  5KE4 A;  2XQ8 A;  4UM1 A;  2BYR A;  4LML A;  2BYQ A;  3JAE A;  4TNW A;  3TLS A;  3U8N A;  3WTI A;  5AFK A;  2XZ5 A;  2WNJ A;  5AFN A;  4QAA A;  4TWH A;  4TWF A;  4NZB A;  5HEH A;  4BFQ A;  2BG9 B;  2XNV A;  4IL4 A;  3WTK A; 
#chains in the Genus database with same CATH homology
 4HFI A;  3UU8 A;  3TLT A;  3TLU A;  3PMZ A;  3C84 A;  5HEG A;  2ZJU A;  3U8K A;  2XNU A;  4TWD A;  2C9T A;  4HQP A;  2XZ6 A;  3C79 A;  2YME A;  3EI0 A;  4ZJS A;  5LG3 A;  5HEO A;  2BG9 E;  4Z90 A;  3WIP A;  3WTO A;  3RIA A;  3WTH A;  4HFD A;  3UQ4 A;  2PGZ A;  3UU3 A;  4UM3 A;  3U8J A;  5BP0 A;  4HFB A;  4IL9 A;  5HCJ A;  4PIR A;  3SIO A;  2PH9 A;  2BYS A;  2UZ6 A;  3ZDG A;  2YKS A;  4WV9 A;  2ZJV A;  2BG9 A;  4HFH A;  5SYO A;  5AFJ A;  1UW6 A;  2Y58 A;  5AFL A;  3UUB A;  4A97 A;  4ILA A;  4AFH A;  2XNT A;  3PEO A;  1UV6 A;  4B5D A;  4COF A;  2BJ0 A;  2WNL A;  4TNV A;  5L4H A;  5HEU A;  3RHW A;  3JAF A;  4FRR A;  4LMJ A;  5J5H A;  4XHE A;  3EAM A;  4ZZC A;  2BYP A;  2XYS A;  5CFB A;  2W8G A;  4QAC A;  4UY2 A;  4BQT A;  5BW2 A;  2XYT A;  3UU6 A;  4UM3 S;  4QAB A;  4UM3 P;  5CO5 A;  3WTL A;  2X00 A;  5TVC A;  5J0Z A;  2XQ7 A;  3EHZ A;  2Y54 A;  5HEJ A;  2BYN A;  2BR8 A;  2Y56 A;  3ZDH A;  1I9B A;  3SQ6 A;  3T4M A;  2X00 D;  3JAD A;  3WTJ A;  2Y7Y A;  5L4E A;  5KZU A;  2QC1 B;  4QH5 A;  4EZ1 A;  2WNC A;  2BG9 C;  5BRX A;  3TLV A;  1UX2 A;  5AIN A;  5JME A;  4ALX A;  3RQU A;  2BR7 A;  3SH1 A;  2XQ6 A;  4ILB A;  4QH1 A;  3RIF A;  2YOE A;  4F8H A;  4UXU A;  5J5I A;  5AFM B;  4ZR6 A;  4XK9 A;  2VL0 A;  2XQ3 A;  5L47 A;  2XQA A;  4AFG A;  3GUA A;  4HFC A;  5AFH A;  4HFE A;  3RQW A;  3WTM A;  5HCM A;  4ZZB A;  4Z91 A;  3IGQ A;  4ZJT A;  4ZK1 A;  3LSV A;  3TLW A;  2XQ5 A;  4X5T A;  5IUX A;  4NPP A;  5J5G A;  2WN9 A;  5LXB A;  2YN6 A;  3P50 A;  2WZY A;  4QH4 A;  4AFT A;  3UU4 A;  3WTN A;  2YMD A;  4ILC A;  3P4W A;  5AFM A;  3ZKR A;  5J5F A;  4IRE A;  3SQ9 A;  3RI5 A;  2XQ4 A;  3U8L A;  5FJV A;  3UU5 A;  3UQ7 A;  2XQ9 A;  4ZK4 A;  4LMK A;  4ZRU A;  4DBM A;  2Y57 A;  2W8F A;  3U8M A;  4D01 A;  4A98 A;  5KE4 A;  2XQ8 A;  4UM1 A;  2BYR A;  4LML A;  2BYQ A;  3JAE A;  4TNW A;  3TLS A;  3U8N A;  3WTI A;  5AFK A;  2XZ5 A;  2WNJ A;  5AFN A;  4QAA A;  4TWH A;  4TWF A;  4NZB A;  5HEH A;  4BFQ A;  2BG9 B;  2XNV A;  4IL4 A;  3WTK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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