4ZUNA

Crystal structure of acetylpolyamine amidohydrolase from mycoplana ramosa in complex with a thiol inhibitor
Total Genus 118
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
118
sequence length
341
structure length
341
Chain Sequence
MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEETGKGAGAGTTANYPMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Acetylpolyamine aminohydrolase
publication title Design, Synthesis, and Evaluation of Polyamine Deacetylase Inhibitors, and High-Resolution Crystal Structures of Their Complexes with Acetylpolyamine Amidohydrolase.
pubmed doi rcsb
source organism Mycoplana ramosa
total genus 118
structure length 341
sequence length 341
chains with identical sequence B
ec nomenclature ec 3.5.1.48: Acetylspermidine deacetylase.
pdb deposition date 2015-05-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00850 Hist_deacetyl Histone deacetylase domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.20 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Histone deacetylase domain 4zunA00
5A2SA 4QA4A 4ZUPA 4ZUMA 1W22A 5G11A 2VQQA 4LY1A 3MZ6A 4QA0A 5G1CA 3Q9BA 5G17A 4BZ8A 1C3PA 4BZ9A 4ZUQA 3EZPA 5LI3A 4ZURA 4QA7A 5DC6A 4BZ6A 4CBYA 4RN0A 3MZ7A 5EFKB 2VQJA 2VQVA 2V5WA 3F06A 5G0HA 1C3SA 3MAXA 3EWFA 1ZZ1A 3SFFA 3ZNRA 3ZNSA 5D1DA 5EFJD 5DC8A 5EEFA 5BWZA 3C0ZA 3MENA 3MZ3A 5G10A 4ZUOA 4ZUNA 4RN2A 5EENA 5THSA 5JI5A 4QA3A 4QA6A 4QA5A 5G1BA 3F0RA 2VQWG 5DC7A 5EFBD 5EF8A 5EEIA 3Q9EA 1T67A 5EFNA 5EEMA 5G0XA 5G0IA 5THUA 2V5XA 4LXZA 5EFHA 4QA2A 1T64A 5G1AA 3Q9CA 3Q9FA 2VQMA 5IX0A 3EZTA 5G0JA 4BKXB 5DC5A 5EF7A 1C3RA 5EEKA 3C0YA 5G13A 3C10A 4BZ7A 4A69A 5ICNB 1ZZ3A 1T69A 1ZZ0A 4CQFA 5THVA 4RN1A 1VKGA 5G0YA 2VCGA 5IWGA 3RQDA 5D1CA 5FUEA 3EW8A 5EFGA 4QA1A 3MZ4A 5G12A 5THTA 5G0GA 2VQOA 5FCWA 2GH6A 5D1BA 3SFHA 4CBTA 5G3WA 4BZ5A 3F07A
chains in the Genus database with same CATH superfamily
5A2SA 4QA4A 3GMZA 4RHJA 4ZUPA 1GQ7A 4ZUMA 1TA1A 4Q3RA 4RLAA 4Q42A 4IXVA 4ITYA 1P8NA 1W22A 5G11A 2PLLA 2VQQA 4LY1A 3THJA 3MZ6A 4MYNA 2PHAA 4QA0A 5G1CA 3NIPA 3Q9BA 4GWCA 5G17A 2CEVA 1C3PA 4BZ8A 4BZ9A 3E6KA 3PZLA 4ZUQA 1P8OA 3LP7A 3EZPA 5LI3A 4ZURA 4Q3SA 4IE1A 4QA7A 1GQ6A 2ZAVA 4GWDA 4Q41A 5DC6A 4BZ6A 4CBYA 3NIOA 4RN0A 3MZ7A 5EFKB 1WOHA 3KV2A 2VQJA 1P8MA 1HQGA 2V5WA 2VQVA 1T4SA 3F06A 4IE2A 5G0HA 5HJ9A 3MFVA 3MJLA 4IXUA 3DJ8A 1C3SA 3MAXA 2PHOA 1ZZ1A 3EWFA 4RHLA 3SFFA 1HQXA 4MXRA 5D1DA 5DC8A 5EFJD 3SL1A 3ZNSA 1TBLA 3NIQA 5EEFA 5BWZA 5HJAA 3C0ZA 3RLAA 1TBJA 3MENA 3MZ3A 4MYFA 5G10A 3LHLA 1HQ5A 2A0MA 1P8PA 3CEVA 4G3HA 4ZUOA 4ZUNA 3SL0A 3MFWA 3THEA 4RN2A 5CEVA 5EENA 5THSA 1T4RA 5JI5A 1RLAA 4IU5A 4MYLA 4Q3TA 4QA3A 4IU4A 1WVBA 4RHIA 1HQHA 4QA6A 4QA5A 5G1BA 2EF4A 3F0RA 4HWWA 4Q3RC 2VQWG 5DC7A 3F80A 4RHMA 4Q3QA 5EFBD 5RLAA 5EF8A 5EEIA 3Q9EA 1T67A 5EFNA 5EEMA 3ZNRA 1XFKA 5G0XA 3MMRA 1ZPGA 5G0IA 5THUA 1ZPEA 4HZEA 1T5GA 2V5XA 3GN0A 4FCIA 4LXZA 5EFHA 1PQ3A 4QA2A 1T64A 5G1AA 4CEVA 3LP4A 3Q9CA 3Q9FA 1T4TA 2VQMA 4DZ4A 1T5FA 5IX0A 1WVAA 4FCKA 3EZTA 5G0JA 4RHQA 4BKXB 4Q40A 2EIVA 1WOIA 5DC5A 5EF7A 1C3RA 5EEKA 4GSZA 1P8SA 3E8ZA 4I06A 2RLAA 3C0YA 4Q3VA 3C10A 5G13A 4BZ7A 3M1RA 4A69A 3E8QA 5ICNB 1ZZ3A 1TBHA 3SJTA 1P8QA 1HQFA 1T69A 3TF3A 1CEVA 2EF5A 1ZZ0A 1R1OA 4IU0A 3E6VA 4CQFA 4Q3PA 4MYKA 5THVA 4RN1A 1VKGA 5G0YA 2VCGA 5IWGA 1WOGA 3RQDA 5D1CA 5FUEA 3EW8A 4RHKA 3THHA 5EFGA 1P8RA 3E9BA 4HXQA 4QA1A 4BZ5A 3MZ4A 4IU1A 5G12A 5THTA 4GSMA 5G0GA 4GSVA 1T4PA 2VQOA 5FCWA 3SKKA 2GH6A 3TH7A 5D1BA 3SFHA 1D3VA 4Q3UA 4CBTA 2AEBA 5G3WA 4IE3A 3F07A
chains in the Genus database with same CATH topology
5A2SA 4QA4A 4ZUPA 4ZUMA 1W22A 5G11A 2VQQA 4LY1A 3MZ6A 4QA0A 5G1CA 3Q9BA 5G17A 4BZ8A 1C3PA 4BZ9A 4ZUQA 3EZPA 5LI3A 4ZURA 4QA7A 5DC6A 4BZ6A 4CBYA 4RN0A 3MZ7A 5EFKB 2VQJA 2VQVA 2V5WA 3F06A 5G0HA 1C3SA 3MAXA 3EWFA 1ZZ1A 3SFFA 3ZNRA 3ZNSA 5D1DA 5EFJD 5DC8A 5EEFA 5BWZA 3C0ZA 3MENA 3MZ3A 5G10A 4ZUOA 4ZUNA 4RN2A 5EENA 5THSA 5JI5A 4QA3A 4QA6A 4QA5A 5G1BA 3F0RA 2VQWG 5DC7A 5EFBD 5EF8A 5EEIA 3Q9EA 1T67A 5EFNA 5EEMA 5G0XA 5G0IA 5THUA 2V5XA 4LXZA 5EFHA 4QA2A 1T64A 5G1AA 3Q9CA 3Q9FA 2VQMA 5IX0A 3EZTA 5G0JA 4BKXB 5DC5A 5EF7A 1C3RA 5EEKA 3C0YA 5G13A 3C10A 4BZ7A 4A69A 5ICNB 1ZZ3A 1T69A 1ZZ0A 4CQFA 5THVA 4RN1A 1VKGA 5G0YA 2VCGA 5IWGA 3RQDA 5D1CA 5FUEA 3EW8A 5EFGA 4QA1A 3MZ4A 5G12A 5THTA 5G0GA 2VQOA 5FCWA 2GH6A 5D1BA 3SFHA 4CBTA 5G3WA 4BZ5A 3F07A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5A2S A;  4QA4 A;  4ZUP A;  4ZUM A;  1W22 A;  5G11 A;  2VQQ A;  4LY1 A;  3MZ6 A;  4QA0 A;  5G1C A;  3Q9B A;  5G17 A;  4BZ8 A;  1C3P A;  4BZ9 A;  4ZUQ A;  3EZP A;  5LI3 A;  4ZUR A;  4QA7 A;  5DC6 A;  4BZ6 A;  4CBY A;  4RN0 A;  3MZ7 A;  5EFK B;  2VQJ A;  2VQV A;  2V5W A;  3F06 A;  5G0H A;  1C3S A;  3MAX A;  3EWF A;  1ZZ1 A;  3SFF A;  3ZNR A;  3ZNS A;  5D1D A;  5EFJ D;  5DC8 A;  5EEF A;  5BWZ A;  3C0Z A;  3MEN A;  3MZ3 A;  5G10 A;  4ZUO A;  4ZUN A;  4RN2 A;  5EEN A;  5THS A;  5JI5 A;  4QA3 A;  4QA6 A;  4QA5 A;  5G1B A;  3F0R A;  2VQW G;  5DC7 A;  5EFB D;  5EF8 A;  5EEI A;  3Q9E A;  1T67 A;  5EFN A;  5EEM A;  5G0X A;  5G0I A;  5THU A;  2V5X A;  4LXZ A;  5EFH A;  4QA2 A;  1T64 A;  5G1A A;  3Q9C A;  3Q9F A;  2VQM A;  5IX0 A;  3EZT A;  5G0J A;  4BKX B;  5DC5 A;  5EF7 A;  1C3R A;  5EEK A;  3C0Y A;  5G13 A;  3C10 A;  4BZ7 A;  4A69 A;  5ICN B;  1ZZ3 A;  1T69 A;  1ZZ0 A;  4CQF A;  5THV A;  4RN1 A;  1VKG A;  5G0Y A;  2VCG A;  5IWG A;  3RQD A;  5D1C A;  5FUE A;  3EW8 A;  5EFG A;  4QA1 A;  3MZ4 A;  5G12 A;  5THT A;  5G0G A;  2VQO A;  5FCW A;  2GH6 A;  5D1B A;  3SFH A;  4CBT A;  5G3W A;  4BZ5 A;  3F07 A; 
#chains in the Genus database with same CATH topology
 5A2S A;  4QA4 A;  3GMZ A;  4RHJ A;  4ZUP A;  1GQ7 A;  4ZUM A;  1TA1 A;  4Q3R A;  4RLA A;  4Q42 A;  4IXV A;  4ITY A;  1P8N A;  1W22 A;  5G11 A;  2PLL A;  2VQQ A;  4LY1 A;  3THJ A;  3MZ6 A;  4MYN A;  2PHA A;  4QA0 A;  5G1C A;  3NIP A;  3Q9B A;  4GWC A;  5G17 A;  2CEV A;  1C3P A;  4BZ8 A;  4BZ9 A;  3E6K A;  3PZL A;  4ZUQ A;  1P8O A;  3LP7 A;  3EZP A;  5LI3 A;  4ZUR A;  4Q3S A;  4IE1 A;  4QA7 A;  1GQ6 A;  2ZAV A;  4GWD A;  4Q41 A;  5DC6 A;  4BZ6 A;  4CBY A;  3NIO A;  4RN0 A;  3MZ7 A;  5EFK B;  1WOH A;  3KV2 A;  2VQJ A;  1P8M A;  1HQG A;  2V5W A;  2VQV A;  1T4S A;  3F06 A;  4IE2 A;  5G0H A;  5HJ9 A;  3MFV A;  3MJL A;  4IXU A;  3DJ8 A;  1C3S A;  3MAX A;  2PHO A;  1ZZ1 A;  3EWF A;  4RHL A;  3SFF A;  1HQX A;  4MXR A;  5D1D A;  5DC8 A;  5EFJ D;  3SL1 A;  3ZNS A;  1TBL A;  3NIQ A;  5EEF A;  5BWZ A;  5HJA A;  3C0Z A;  3RLA A;  1TBJ A;  3MEN A;  3MZ3 A;  4MYF A;  5G10 A;  3LHL A;  1HQ5 A;  2A0M A;  1P8P A;  3CEV A;  4G3H A;  4ZUO A;  4ZUN A;  3SL0 A;  3MFW A;  3THE A;  4RN2 A;  5CEV A;  5EEN A;  5THS A;  1T4R A;  5JI5 A;  1RLA A;  4IU5 A;  4MYL A;  4Q3T A;  4QA3 A;  4IU4 A;  1WVB A;  4RHI A;  1HQH A;  4QA6 A;  4QA5 A;  5G1B A;  2EF4 A;  3F0R A;  4HWW A;  4Q3R C;  2VQW G;  5DC7 A;  3F80 A;  4RHM A;  4Q3Q A;  5EFB D;  5RLA A;  5EF8 A;  5EEI A;  3Q9E A;  1T67 A;  5EFN A;  5EEM A;  3ZNR A;  1XFK A;  5G0X A;  3MMR A;  1ZPG A;  5G0I A;  5THU A;  1ZPE A;  4HZE A;  1T5G A;  2V5X A;  3GN0 A;  4FCI A;  4LXZ A;  5EFH A;  1PQ3 A;  4QA2 A;  1T64 A;  5G1A A;  4CEV A;  3LP4 A;  3Q9C A;  3Q9F A;  1T4T A;  2VQM A;  4DZ4 A;  1T5F A;  5IX0 A;  1WVA A;  4FCK A;  3EZT A;  5G0J A;  4RHQ A;  4BKX B;  4Q40 A;  2EIV A;  1WOI A;  5DC5 A;  5EF7 A;  1C3R A;  5EEK A;  4GSZ A;  1P8S A;  3E8Z A;  4I06 A;  2RLA A;  3C0Y A;  4Q3V A;  3C10 A;  5G13 A;  4BZ7 A;  3M1R A;  4A69 A;  3E8Q A;  5ICN B;  1ZZ3 A;  1TBH A;  3SJT A;  1P8Q A;  1HQF A;  1T69 A;  3TF3 A;  1CEV A;  2EF5 A;  1ZZ0 A;  1R1O A;  4IU0 A;  3E6V A;  4CQF A;  4Q3P A;  4MYK A;  5THV A;  4RN1 A;  1VKG A;  5G0Y A;  2VCG A;  5IWG A;  1WOG A;  3RQD A;  5D1C A;  5FUE A;  3EW8 A;  4RHK A;  3THH A;  5EFG A;  1P8R A;  3E9B A;  4HXQ A;  4QA1 A;  4BZ5 A;  3MZ4 A;  4IU1 A;  5G12 A;  5THT A;  4GSM A;  5G0G A;  4GSV A;  1T4P A;  2VQO A;  5FCW A;  3SKK A;  2GH6 A;  3TH7 A;  5D1B A;  3SFH A;  1D3V A;  4Q3U A;  4CBT A;  2AEB A;  5G3W A;  4IE3 A;  3F07 A; 
#chains in the Genus database with same CATH homology
 5A2S A;  4QA4 A;  4ZUP A;  4ZUM A;  1W22 A;  5G11 A;  2VQQ A;  4LY1 A;  3MZ6 A;  4QA0 A;  5G1C A;  3Q9B A;  5G17 A;  4BZ8 A;  1C3P A;  4BZ9 A;  4ZUQ A;  3EZP A;  5LI3 A;  4ZUR A;  4QA7 A;  5DC6 A;  4BZ6 A;  4CBY A;  4RN0 A;  3MZ7 A;  5EFK B;  2VQJ A;  2VQV A;  2V5W A;  3F06 A;  5G0H A;  1C3S A;  3MAX A;  3EWF A;  1ZZ1 A;  3SFF A;  3ZNR A;  3ZNS A;  5D1D A;  5EFJ D;  5DC8 A;  5EEF A;  5BWZ A;  3C0Z A;  3MEN A;  3MZ3 A;  5G10 A;  4ZUO A;  4ZUN A;  4RN2 A;  5EEN A;  5THS A;  5JI5 A;  4QA3 A;  4QA6 A;  4QA5 A;  5G1B A;  3F0R A;  2VQW G;  5DC7 A;  5EFB D;  5EF8 A;  5EEI A;  3Q9E A;  1T67 A;  5EFN A;  5EEM A;  5G0X A;  5G0I A;  5THU A;  2V5X A;  4LXZ A;  5EFH A;  4QA2 A;  1T64 A;  5G1A A;  3Q9C A;  3Q9F A;  2VQM A;  5IX0 A;  3EZT A;  5G0J A;  4BKX B;  5DC5 A;  5EF7 A;  1C3R A;  5EEK A;  3C0Y A;  5G13 A;  3C10 A;  4BZ7 A;  4A69 A;  5ICN B;  1ZZ3 A;  1T69 A;  1ZZ0 A;  4CQF A;  5THV A;  4RN1 A;  1VKG A;  5G0Y A;  2VCG A;  5IWG A;  3RQD A;  5D1C A;  5FUE A;  3EW8 A;  5EFG A;  4QA1 A;  3MZ4 A;  5G12 A;  5THT A;  5G0G A;  2VQO A;  5FCW A;  2GH6 A;  5D1B A;  3SFH A;  4CBT A;  5G3W A;  4BZ5 A;  3F07 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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