4ZWPA

Crystal structure of organophosphate anhydrolase/prolidase mutant y212f
Total Genus 148
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
148
sequence length
438
structure length
422
Chain Sequence
KLAVLYAEHIATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWNEYWADYFDIELLVKPDQVEKLLPYDKARFAYIGEYLEVAQALGFELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLATQHSENDTPFGNIVALNENCAILHYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGEGEFAELVATMKQHQIALCNQLAPGKLYGELHLDCHQRVAQTLSDFNIVNLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQGAFLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSLENMTRELELD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Alteromonas sp.
publication title Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX.
pubmed doi rcsb
molecule keywords OPAA organophosphate prolidase anhydrolase
total genus 148
structure length 422
sequence length 438
chains with identical sequence B
ec nomenclature ec 3.1.8.1: Aryldialkylphosphatase.
pdb deposition date 2015-05-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4zwpA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4zwpA02
4IKSA 4U6JA 4IKRA 4S01A 2IW2A 4U71A 4RZYA 2BHAA 1C27A 1XGNA 1B6AA 1YVMA 4B28A 4FKCA 1XGOA 4U75A 1BN5A 1C22A 4U70A 1MATA 5JI6A 2V3YA 3PKBA 2Q92A 3MR1A 3IU8A 3S6BA 3QOCA 4FLLA 4FUKA 1QXWA 4A6WA 1WL6A 2V3XA 1YW9A 4PNCA 4U73A 3OOOA 2BWUA 2EA4A 2EVOA 2BWWA 3L7GA 1YJ3A 4FLIA 4U6WA 3I7MA 1C21A 4QR8A 2GU6A 4IKTA 5CNXA 2EVCA 1XGMA 2MATA 1KP0A 2DFIA 2GZ5A 2ZSGA 4OOKA 5CLSA 3D27A 2BN7A 1WY2A 4RGZ1 1QXYA 2ADUA 2OAZA 2GA2A 3O5VA 1W2MA 1C23A 1W7VA 4A6VA 3RVAA 2GGBA 3BIPA 4FO8A 1QZYA 3IU7A 5CDVA 3MX6A 2GG8A 2P9AA 1R58A 3CB5A 4IDYA 1YW8A 3OVKA 4U1BA 3BITA 2B3HA 3RORA 4ZWOA 1R5HA 2GU4A 4Z7MA 4IF7A 4S00A 5JFRA 1WLRA 2BB7A 2BHCA 2EVMA 1O0XA 4MATA 4R60A 2HOWA 2Q94A 2B3KA 1CHMA 3FMRA 4IKUA 2BWXA 2BWSA 3TAVA 1KQ0A 4FLKA 1QXZA 2GU7A 2GGCA 4IECA 3CTZA 4U6EA 3L24A 2P98A 3FMQA 2B3LA 2Q93A 3PKCA 3IU9A 2P99A 3PKDA 4KM3A 1XNZA 4U76A 5FCHA 4FO7A 4PV4A 5E2CA 5CDLA 1BOAA 1Y1NA 1WN1A 2BWYA 1KQ9A 2Q95A 3MATA 4IPAA 3BIQA 5D6FA 2BWTA 2V6CA 4ZWUA 2G6PA 1M35A 2Q8KA 1WKMA 4FLJA 2GU5A 1A16A 5E5BA 2BHDA 2GG9A 2Q96A 1C24A 4RZZA 2GG5A 3TB5A 4IU6A 1R5GA 3Q6DA 2GG3A 1JAWA 3CB6A 1WBQA 2NQ6A 2OKNA 3IL0A 5D6EA 4JUQA 1WL9A 2GG7A 5CIKA 4EGEA 1PV9A 2GG0A 3FM3A 5JHUA 3PKAA 4S2RP 2GTXA 2GG2A 5CDEA 2EA2A 3IG4A 2NQ7A 5CE6A 1XGSA 5FCFA 3PKEA 2BWVA 4U69A 4HXXA 2V3ZA 4ZWPA 4S2TP 1N51A 2BH3A 4ZNGA 2BHBA 3PN9A 4U6ZA 1B59A 1YW7A 3PEBA 4U6CA
chains in the Genus database with same CATH superfamily
4IKSA 4U6JA 4IKRA 4S01A 2IW2A 4U71A 4RZYA 2BHAA 1C27A 1XGNA 1B6AA 1YVMA 4B28A 4FKCA 1XGOA 4U75A 1BN5A 1C22A 4U70A 1MATA 5JI6A 2V3YA 3PKBA 2Q92A 3MR1A 3IU8A 3S6BA 3QOCA 4FLLA 4FUKA 1QXWA 4A6WA 1WL6A 2V3XA 1YW9A 4PNCA 4U73A 3OOOA 2BWUA 2EA4A 2EVOA 2BWWA 3L7GA 1YJ3A 4FLIA 4U6WA 3I7MA 1C21A 4QR8A 2GU6A 4IKTA 5CNXA 2EVCA 1XGMA 2MATA 1KP0A 2DFIA 2GZ5A 2ZSGA 4OOKA 5CLSA 3D27A 2BN7A 1WY2A 4RGZ1 1QXYA 2ADUA 2OAZA 2GA2A 3O5VA 1W2MA 1C23A 1W7VA 4A6VA 3RVAA 2GGBA 3BIPA 4FO8A 1QZYA 3IU7A 5CDVA 3MX6A 2GG8A 2P9AA 1R58A 3CB5A 4IDYA 1YW8A 3OVKA 4U1BA 3BITA 2B3HA 3RORA 4ZWOA 1R5HA 2GU4A 4Z7MA 4IF7A 4S00A 5JFRA 1WLRA 2BB7A 2BHCA 2EVMA 1O0XA 4MATA 4R60A 2HOWA 2Q94A 2B3KA 1CHMA 3FMRA 4IKUA 2BWXA 2BWSA 3TAVA 1KQ0A 4FLKA 1QXZA 2GU7A 2GGCA 4IECA 3CTZA 4U6EA 3L24A 2P98A 3FMQA 2B3LA 2Q93A 3PKCA 3IU9A 2P99A 3PKDA 4KM3A 1XNZA 4U76A 5FCHA 4FO7A 4PV4A 5E2CA 5CDLA 1BOAA 1Y1NA 1WN1A 2BWYA 1KQ9A 2Q95A 3MATA 4IPAA 3BIQA 5D6FA 2BWTA 2V6CA 4ZWUA 2G6PA 1M35A 2Q8KA 1WKMA 4FLJA 2GU5A 1A16A 5E5BA 2BHDA 2GG9A 2Q96A 1C24A 4RZZA 2GG5A 3TB5A 4IU6A 1R5GA 3Q6DA 2GG3A 1JAWA 3CB6A 1WBQA 2NQ6A 2OKNA 3IL0A 5D6EA 4JUQA 1WL9A 2GG7A 5CIKA 4EGEA 1PV9A 2GG0A 3FM3A 5JHUA 3PKAA 4S2RP 2GTXA 2GG2A 5CDEA 2EA2A 3IG4A 2NQ7A 5CE6A 1XGSA 5FCFA 3PKEA 2BWVA 4U69A 4HXXA 2V3ZA 4ZWPA 4S2TP 1N51A 2BH3A 4ZNGA 2BHBA 3PN9A 4U6ZA 1B59A 1YW7A 3PEBA 4U6CA
chains in the Genus database with same CATH topology
4IKSA 4U6JA 4IKRA 4S01A 2IW2A 4U71A 4RZYA 2BHAA 1C27A 1XGNA 1B6AA 1YVMA 4B28A 4FKCA 1XGOA 4U75A 1BN5A 1C22A 4U70A 1MATA 5JI6A 2V3YA 3PKBA 2Q92A 3MR1A 3IU8A 3S6BA 3QOCA 4FLLA 4FUKA 1QXWA 4A6WA 1WL6A 2V3XA 1YW9A 4PNCA 4U73A 3OOOA 2BWUA 2EA4A 2EVOA 2BWWA 3L7GA 1YJ3A 4FLIA 4U6WA 3I7MA 1C21A 4QR8A 2GU6A 4IKTA 5CNXA 2EVCA 1XGMA 2MATA 1KP0A 2DFIA 2GZ5A 2ZSGA 4OOKA 5CLSA 3D27A 2BN7A 1WY2A 4RGZ1 1QXYA 2ADUA 2OAZA 2GA2A 3O5VA 1W2MA 1C23A 1W7VA 4A6VA 3RVAA 2GGBA 3BIPA 4FO8A 1QZYA 3IU7A 5CDVA 3MX6A 2GG8A 2P9AA 1R58A 3CB5A 4IDYA 1YW8A 3OVKA 4U1BA 3BITA 2B3HA 3RORA 4ZWOA 1R5HA 2GU4A 4Z7MA 4IF7A 4S00A 5JFRA 1WLRA 2BB7A 2BHCA 2EVMA 1O0XA 4MATA 4R60A 2HOWA 2Q94A 2B3KA 1CHMA 3FMRA 4IKUA 2BWXA 2BWSA 3TAVA 1KQ0A 4FLKA 1QXZA 2GU7A 2GGCA 4IECA 3CTZA 4U6EA 3L24A 2P98A 3FMQA 2B3LA 2Q93A 3PKCA 3IU9A 2P99A 3PKDA 4KM3A 1XNZA 4U76A 5FCHA 4FO7A 4PV4A 5E2CA 5CDLA 1BOAA 1Y1NA 1WN1A 2BWYA 1KQ9A 2Q95A 3MATA 4IPAA 3BIQA 5D6FA 2BWTA 2V6CA 4ZWUA 2G6PA 1M35A 2Q8KA 1WKMA 4FLJA 2GU5A 1A16A 5E5BA 2BHDA 2GG9A 2Q96A 1C24A 4RZZA 2GG5A 3TB5A 4IU6A 1R5GA 3Q6DA 2GG3A 1JAWA 3CB6A 1WBQA 2NQ6A 2OKNA 3IL0A 5D6EA 4JUQA 1WL9A 2GG7A 5CIKA 4EGEA 1PV9A 2GG0A 3FM3A 5JHUA 3PKAA 4S2RP 2GTXA 2GG2A 5CDEA 2EA2A 3IG4A 2NQ7A 5CE6A 1XGSA 5FCFA 3PKEA 2BWVA 4U69A 4HXXA 2V3ZA 4ZWPA 4S2TP 1N51A 2BH3A 4ZNGA 2BHBA 3PN9A 4U6ZA 1B59A 1YW7A 3PEBA 4U6CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IKS A;  4U6J A;  4IKR A;  4S01 A;  2IW2 A;  4U71 A;  4RZY A;  2BHA A;  1C27 A;  1XGN A;  1B6A A;  1YVM A;  4B28 A;  4FKC A;  1XGO A;  4U75 A;  1BN5 A;  1C22 A;  4U70 A;  1MAT A;  5JI6 A;  2V3Y A;  3PKB A;  2Q92 A;  3MR1 A;  3IU8 A;  3S6B A;  3QOC A;  4FLL A;  4FUK A;  1QXW A;  4A6W A;  1WL6 A;  2V3X A;  1YW9 A;  4PNC A;  4U73 A;  3OOO A;  2BWU A;  2EA4 A;  2EVO A;  2BWW A;  3L7G A;  1YJ3 A;  4FLI A;  4U6W A;  3I7M A;  1C21 A;  4QR8 A;  2GU6 A;  4IKT A;  5CNX A;  2EVC A;  1XGM A;  2MAT A;  1KP0 A;  2DFI A;  2GZ5 A;  2ZSG A;  4OOK A;  5CLS A;  3D27 A;  2BN7 A;  1WY2 A;  4RGZ 1;  1QXY A;  2ADU A;  2OAZ A;  2GA2 A;  3O5V A;  1W2M A;  1C23 A;  1W7V A;  4A6V A;  3RVA A;  2GGB A;  3BIP A;  4FO8 A;  1QZY A;  3IU7 A;  5CDV A;  3MX6 A;  2GG8 A;  2P9A A;  1R58 A;  3CB5 A;  4IDY A;  1YW8 A;  3OVK A;  4U1B A;  3BIT A;  2B3H A;  3ROR A;  4ZWO A;  1R5H A;  2GU4 A;  4Z7M A;  4IF7 A;  4S00 A;  5JFR A;  1WLR A;  2BB7 A;  2BHC A;  2EVM A;  1O0X A;  4MAT A;  4R60 A;  2HOW A;  2Q94 A;  2B3K A;  1CHM A;  3FMR A;  4IKU A;  2BWX A;  2BWS A;  3TAV A;  1KQ0 A;  4FLK A;  1QXZ A;  2GU7 A;  2GGC A;  4IEC A;  3CTZ A;  4U6E A;  3L24 A;  2P98 A;  3FMQ A;  2B3L A;  2Q93 A;  3PKC A;  3IU9 A;  2P99 A;  3PKD A;  4KM3 A;  1XNZ A;  4U76 A;  5FCH A;  4FO7 A;  4PV4 A;  5E2C A;  5CDL A;  1BOA A;  1Y1N A;  1WN1 A;  2BWY A;  1KQ9 A;  2Q95 A;  3MAT A;  4IPA A;  3BIQ A;  5D6F A;  2BWT A;  2V6C A;  4ZWU A;  2G6P A;  1M35 A;  2Q8K A;  1WKM A;  4FLJ A;  2GU5 A;  1A16 A;  5E5B A;  2BHD A;  2GG9 A;  2Q96 A;  1C24 A;  4RZZ A;  2GG5 A;  3TB5 A;  4IU6 A;  1R5G A;  3Q6D A;  2GG3 A;  1JAW A;  3CB6 A;  1WBQ A;  2NQ6 A;  2OKN A;  3IL0 A;  5D6E A;  4JUQ A;  1WL9 A;  2GG7 A;  5CIK A;  4EGE A;  1PV9 A;  2GG0 A;  3FM3 A;  5JHU A;  3PKA A;  4S2R P;  2GTX A;  2GG2 A;  5CDE A;  2EA2 A;  3IG4 A;  2NQ7 A;  5CE6 A;  1XGS A;  5FCF A;  3PKE A;  2BWV A;  4U69 A;  4HXX A;  2V3Z A;  4ZWP A;  4S2T P;  1N51 A;  2BH3 A;  4ZNG A;  2BHB A;  3PN9 A;  4U6Z A;  1B59 A;  1YW7 A;  3PEB A;  4U6C A; 
#chains in the Genus database with same CATH topology
 4IKS A;  4U6J A;  4IKR A;  4S01 A;  2IW2 A;  4U71 A;  4RZY A;  2BHA A;  1C27 A;  1XGN A;  1B6A A;  1YVM A;  4B28 A;  4FKC A;  1XGO A;  4U75 A;  1BN5 A;  1C22 A;  4U70 A;  1MAT A;  5JI6 A;  2V3Y A;  3PKB A;  2Q92 A;  3MR1 A;  3IU8 A;  3S6B A;  3QOC A;  4FLL A;  4FUK A;  1QXW A;  4A6W A;  1WL6 A;  2V3X A;  1YW9 A;  4PNC A;  4U73 A;  3OOO A;  2BWU A;  2EA4 A;  2EVO A;  2BWW A;  3L7G A;  1YJ3 A;  4FLI A;  4U6W A;  3I7M A;  1C21 A;  4QR8 A;  2GU6 A;  4IKT A;  5CNX A;  2EVC A;  1XGM A;  2MAT A;  1KP0 A;  2DFI A;  2GZ5 A;  2ZSG A;  4OOK A;  5CLS A;  3D27 A;  2BN7 A;  1WY2 A;  4RGZ 1;  1QXY A;  2ADU A;  2OAZ A;  2GA2 A;  3O5V A;  1W2M A;  1C23 A;  1W7V A;  4A6V A;  3RVA A;  2GGB A;  3BIP A;  4FO8 A;  1QZY A;  3IU7 A;  5CDV A;  3MX6 A;  2GG8 A;  2P9A A;  1R58 A;  3CB5 A;  4IDY A;  1YW8 A;  3OVK A;  4U1B A;  3BIT A;  2B3H A;  3ROR A;  4ZWO A;  1R5H A;  2GU4 A;  4Z7M A;  4IF7 A;  4S00 A;  5JFR A;  1WLR A;  2BB7 A;  2BHC A;  2EVM A;  1O0X A;  4MAT A;  4R60 A;  2HOW A;  2Q94 A;  2B3K A;  1CHM A;  3FMR A;  4IKU A;  2BWX A;  2BWS A;  3TAV A;  1KQ0 A;  4FLK A;  1QXZ A;  2GU7 A;  2GGC A;  4IEC A;  3CTZ A;  4U6E A;  3L24 A;  2P98 A;  3FMQ A;  2B3L A;  2Q93 A;  3PKC A;  3IU9 A;  2P99 A;  3PKD A;  4KM3 A;  1XNZ A;  4U76 A;  5FCH A;  4FO7 A;  4PV4 A;  5E2C A;  5CDL A;  1BOA A;  1Y1N A;  1WN1 A;  2BWY A;  1KQ9 A;  2Q95 A;  3MAT A;  4IPA A;  3BIQ A;  5D6F A;  2BWT A;  2V6C A;  4ZWU A;  2G6P A;  1M35 A;  2Q8K A;  1WKM A;  4FLJ A;  2GU5 A;  1A16 A;  5E5B A;  2BHD A;  2GG9 A;  2Q96 A;  1C24 A;  4RZZ A;  2GG5 A;  3TB5 A;  4IU6 A;  1R5G A;  3Q6D A;  2GG3 A;  1JAW A;  3CB6 A;  1WBQ A;  2NQ6 A;  2OKN A;  3IL0 A;  5D6E A;  4JUQ A;  1WL9 A;  2GG7 A;  5CIK A;  4EGE A;  1PV9 A;  2GG0 A;  3FM3 A;  5JHU A;  3PKA A;  4S2R P;  2GTX A;  2GG2 A;  5CDE A;  2EA2 A;  3IG4 A;  2NQ7 A;  5CE6 A;  1XGS A;  5FCF A;  3PKE A;  2BWV A;  4U69 A;  4HXX A;  2V3Z A;  4ZWP A;  4S2T P;  1N51 A;  2BH3 A;  4ZNG A;  2BHB A;  3PN9 A;  4U6Z A;  1B59 A;  1YW7 A;  3PEB A;  4U6C A; 
#chains in the Genus database with same CATH homology
 4IKS A;  4U6J A;  4IKR A;  4S01 A;  2IW2 A;  4U71 A;  4RZY A;  2BHA A;  1C27 A;  1XGN A;  1B6A A;  1YVM A;  4B28 A;  4FKC A;  1XGO A;  4U75 A;  1BN5 A;  1C22 A;  4U70 A;  1MAT A;  5JI6 A;  2V3Y A;  3PKB A;  2Q92 A;  3MR1 A;  3IU8 A;  3S6B A;  3QOC A;  4FLL A;  4FUK A;  1QXW A;  4A6W A;  1WL6 A;  2V3X A;  1YW9 A;  4PNC A;  4U73 A;  3OOO A;  2BWU A;  2EA4 A;  2EVO A;  2BWW A;  3L7G A;  1YJ3 A;  4FLI A;  4U6W A;  3I7M A;  1C21 A;  4QR8 A;  2GU6 A;  4IKT A;  5CNX A;  2EVC A;  1XGM A;  2MAT A;  1KP0 A;  2DFI A;  2GZ5 A;  2ZSG A;  4OOK A;  5CLS A;  3D27 A;  2BN7 A;  1WY2 A;  4RGZ 1;  1QXY A;  2ADU A;  2OAZ A;  2GA2 A;  3O5V A;  1W2M A;  1C23 A;  1W7V A;  4A6V A;  3RVA A;  2GGB A;  3BIP A;  4FO8 A;  1QZY A;  3IU7 A;  5CDV A;  3MX6 A;  2GG8 A;  2P9A A;  1R58 A;  3CB5 A;  4IDY A;  1YW8 A;  3OVK A;  4U1B A;  3BIT A;  2B3H A;  3ROR A;  4ZWO A;  1R5H A;  2GU4 A;  4Z7M A;  4IF7 A;  4S00 A;  5JFR A;  1WLR A;  2BB7 A;  2BHC A;  2EVM A;  1O0X A;  4MAT A;  4R60 A;  2HOW A;  2Q94 A;  2B3K A;  1CHM A;  3FMR A;  4IKU A;  2BWX A;  2BWS A;  3TAV A;  1KQ0 A;  4FLK A;  1QXZ A;  2GU7 A;  2GGC A;  4IEC A;  3CTZ A;  4U6E A;  3L24 A;  2P98 A;  3FMQ A;  2B3L A;  2Q93 A;  3PKC A;  3IU9 A;  2P99 A;  3PKD A;  4KM3 A;  1XNZ A;  4U76 A;  5FCH A;  4FO7 A;  4PV4 A;  5E2C A;  5CDL A;  1BOA A;  1Y1N A;  1WN1 A;  2BWY A;  1KQ9 A;  2Q95 A;  3MAT A;  4IPA A;  3BIQ A;  5D6F A;  2BWT A;  2V6C A;  4ZWU A;  2G6P A;  1M35 A;  2Q8K A;  1WKM A;  4FLJ A;  2GU5 A;  1A16 A;  5E5B A;  2BHD A;  2GG9 A;  2Q96 A;  1C24 A;  4RZZ A;  2GG5 A;  3TB5 A;  4IU6 A;  1R5G A;  3Q6D A;  2GG3 A;  1JAW A;  3CB6 A;  1WBQ A;  2NQ6 A;  2OKN A;  3IL0 A;  5D6E A;  4JUQ A;  1WL9 A;  2GG7 A;  5CIK A;  4EGE A;  1PV9 A;  2GG0 A;  3FM3 A;  5JHU A;  3PKA A;  4S2R P;  2GTX A;  2GG2 A;  5CDE A;  2EA2 A;  3IG4 A;  2NQ7 A;  5CE6 A;  1XGS A;  5FCF A;  3PKE A;  2BWV A;  4U69 A;  4HXX A;  2V3Z A;  4ZWP A;  4S2T P;  1N51 A;  2BH3 A;  4ZNG A;  2BHB A;  3PN9 A;  4U6Z A;  1B59 A;  1YW7 A;  3PEB A;  4U6C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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