4CSIA

Crystal structure of the thermostable cellobiohydrolase cel7a from the fungus humicola grisea var. thermoidea.
Total Genus 129
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
129
sequence length
437
structure length
437
Chain Sequence
EQACSLTTERHPSLSWKKCTAGGQCQTVQASITLDSNWRWTHQVSGSTNCYTGNKWDTSICTDAKSCAQNCCVDGADYTSTYGITTNGDSLSLKFVTKGQHSTNVGSRTYLMDGEDKYQTFELLGNEFTFDVDVSNIGCGLNGALYFVSMDADGGLSRYPGNKAGAKYGTGYCDAQCPRDIKFINGEANIEGWTGSTNDPNAGAGRYGTCCSEMDIWEANNMATAFTPHPCTIIGQSRCEGDSCGGTYSNERYAGVCDPDGCDFNSYRQGNKTFYGKGMTVDTTKKITVVTQFLKDANGDLGEIKRFYVQDGKIIPNSESTIPGVEGNSITQDWCDRQKVAFGDIDDFNRKGGMKQMGKALAGPMVLVMSIWDDHASNMLWLDSTFPVDAAGKPGAERGACPTTSGVPAEVEAEAPNSNVVFSNIRFGPIGSTVAGL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords CELLULASE
publication title Expression, Crystal Structure and Cellulase Activity of the Thermostable Cellobiohydrolase Cel7A from the Fungus Humicola Grisea Var. Thermoidea.
pubmed doi rcsb
source organism Humicola grisea var. thermoidea
total genus 129
structure length 437
sequence length 437
chains with identical sequence B
ec nomenclature ec 3.2.1.91: Cellulose 1,4-beta-cellobiosidase (non-reducing end).
pdb deposition date 2014-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00840 Glyco_hydro_7 Glycosyl hydrolase family 7
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.100.10 Mainly Beta Distorted Sandwich 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A Glycoside hydrolase, family 7, domain 4csiA00
2OVWA 3PL3A 2RFWA 1OVWA 2V3RA 3PFXA 4D5IA 2RFZA 7CELA 4V0ZA 1Z3WA 4D5OA 4ZZUA 2RG0A 4D5VA 3CELA 4XNNA 1DYMA 3PFZA 1OJIA 3PFJA 1Q9HA 4C4DA 5AMPA 2Y9NA 2V3IA 4D5QA 4ZZTA 4IPMA 2CELA 1Q2BA 2YOKA 1EG1A 4V1ZA 1OJJA 1CELA 1A39A 4ZZWA 1GPIA 1Z3VA 6CELA 1DY4A 4P1JA 2YG1A 4ZZQA 2A39A 3OVWA 4ZZPA 2RFYA 4HAQA 1H46X 4UWTA 4C4CA 5CELA 4XEBA 2XSPA 4HAPA 1Q2EA 1OJKA 4D5JA 1Z3TA 4CSIA 4GWAA 4V20A 4P1HA 4OVWA 4ZZVA 4CELA 4D5PA 1EGNA
chains in the Genus database with same CATH superfamily
2OVWA 3PL3A 2RFWA 1OVWA 2V3RA 3PFXA 4D5IA 2RFZA 7CELA 4V0ZA 1Z3WA 4D5OA 4ZZUA 2RG0A 4D5VA 3CELA 4XNNA 1DYMA 3PFZA 1OJIA 3PFJA 1Q9HA 4C4DA 5AMPA 2Y9NA 2V3IA 4D5QA 4ZZTA 4IPMA 2CELA 1Q2BA 2YOKA 1EG1A 4V1ZA 1OJJA 1CELA 1A39A 4ZZWA 1GPIA 1Z3VA 6CELA 1DY4A 4P1JA 2YG1A 4ZZQA 2A39A 3OVWA 4ZZPA 2RFYA 4HAQA 1H46X 4UWTA 4C4CA 5CELA 4XEBA 2XSPA 4HAPA 1Q2EA 1OJKA 4D5JA 1Z3TA 4CSIA 4GWAA 4V20A 4P1HA 4OVWA 4ZZVA 4CELA 4D5PA 1EGNA
chains in the Genus database with same CATH topology
2OVWA 3PL3A 2RFWA 1OVWA 2V3RA 3PFXA 4D5IA 2RFZA 7CELA 4V0ZA 1Z3WA 4D5OA 4ZZUA 2RG0A 4D5VA 3CELA 4XNNA 1DYMA 3PFZA 1OJIA 3PFJA 1Q9HA 4C4DA 5AMPA 2Y9NA 2V3IA 4D5QA 4ZZTA 4IPMA 2CELA 1Q2BA 2YOKA 1EG1A 4V1ZA 1OJJA 1CELA 1A39A 4ZZWA 1GPIA 1Z3VA 6CELA 1DY4A 4P1JA 2YG1A 4ZZQA 2A39A 3OVWA 4ZZPA 2RFYA 4HAQA 1H46X 4UWTA 4C4CA 5CELA 4XEBA 2XSPA 4HAPA 1Q2EA 1OJKA 4D5JA 1Z3TA 4CSIA 4GWAA 4V20A 4P1HA 4OVWA 4ZZVA 4CELA 4D5PA 1EGNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2OVW A;  3PL3 A;  2RFW A;  1OVW A;  2V3R A;  3PFX A;  4D5I A;  2RFZ A;  7CEL A;  4V0Z A;  1Z3W A;  4D5O A;  4ZZU A;  2RG0 A;  4D5V A;  3CEL A;  4XNN A;  1DYM A;  3PFZ A;  1OJI A;  3PFJ A;  1Q9H A;  4C4D A;  5AMP A;  2Y9N A;  2V3I A;  4D5Q A;  4ZZT A;  4IPM A;  2CEL A;  1Q2B A;  2YOK A;  1EG1 A;  4V1Z A;  1OJJ A;  1CEL A;  1A39 A;  4ZZW A;  1GPI A;  1Z3V A;  6CEL A;  1DY4 A;  4P1J A;  2YG1 A;  4ZZQ A;  2A39 A;  3OVW A;  4ZZP A;  2RFY A;  4HAQ A;  1H46 X;  4UWT A;  4C4C A;  5CEL A;  4XEB A;  2XSP A;  4HAP A;  1Q2E A;  1OJK A;  4D5J A;  1Z3T A;  4CSI A;  4GWA A;  4V20 A;  4P1H A;  4OVW A;  4ZZV A;  4CEL A;  4D5P A;  1EGN A; 
#chains in the Genus database with same CATH topology
 2OVW A;  3PL3 A;  2RFW A;  1OVW A;  2V3R A;  3PFX A;  4D5I A;  2RFZ A;  7CEL A;  4V0Z A;  1Z3W A;  4D5O A;  4ZZU A;  2RG0 A;  4D5V A;  3CEL A;  4XNN A;  1DYM A;  3PFZ A;  1OJI A;  3PFJ A;  1Q9H A;  4C4D A;  5AMP A;  2Y9N A;  2V3I A;  4D5Q A;  4ZZT A;  4IPM A;  2CEL A;  1Q2B A;  2YOK A;  1EG1 A;  4V1Z A;  1OJJ A;  1CEL A;  1A39 A;  4ZZW A;  1GPI A;  1Z3V A;  6CEL A;  1DY4 A;  4P1J A;  2YG1 A;  4ZZQ A;  2A39 A;  3OVW A;  4ZZP A;  2RFY A;  4HAQ A;  1H46 X;  4UWT A;  4C4C A;  5CEL A;  4XEB A;  2XSP A;  4HAP A;  1Q2E A;  1OJK A;  4D5J A;  1Z3T A;  4CSI A;  4GWA A;  4V20 A;  4P1H A;  4OVW A;  4ZZV A;  4CEL A;  4D5P A;  1EGN A; 
#chains in the Genus database with same CATH homology
 2OVW A;  3PL3 A;  2RFW A;  1OVW A;  2V3R A;  3PFX A;  4D5I A;  2RFZ A;  7CEL A;  4V0Z A;  1Z3W A;  4D5O A;  4ZZU A;  2RG0 A;  4D5V A;  3CEL A;  4XNN A;  1DYM A;  3PFZ A;  1OJI A;  3PFJ A;  1Q9H A;  4C4D A;  5AMP A;  2Y9N A;  2V3I A;  4D5Q A;  4ZZT A;  4IPM A;  2CEL A;  1Q2B A;  2YOK A;  1EG1 A;  4V1Z A;  1OJJ A;  1CEL A;  1A39 A;  4ZZW A;  1GPI A;  1Z3V A;  6CEL A;  1DY4 A;  4P1J A;  2YG1 A;  4ZZQ A;  2A39 A;  3OVW A;  4ZZP A;  2RFY A;  4HAQ A;  1H46 X;  4UWT A;  4C4C A;  5CEL A;  4XEB A;  2XSP A;  4HAP A;  1Q2E A;  1OJK A;  4D5J A;  1Z3T A;  4CSI A;  4GWA A;  4V20 A;  4P1H A;  4OVW A;  4ZZV A;  4CEL A;  4D5P A;  1EGN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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