4D5JA

Hypocrea jecorina cellobiohydrolase cel7a e217q soaked with xylotriose.
Total Genus 134
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
134
sequence length
434
structure length
434
Chain Sequence
ESACTLQSETHPPLTWQKCSSGGTCTQQTGSVVIDANWRWTHATNSSTNCYDGNTWSSTLCPDNETCAKNCCLDGAAYASTYGVTTSGNSLSIDFVTQSAQKNVGARLYLMASDTTYQEFTLLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVSKYPTNTAGAKYGTGYCDSQCPRDLKFINGQANVEGWEPSSNNANTGIGGHGSCCSEMDIWQANSISEALTPHPCTTVGQEICEGDGCGGTYSDNRYGGTCDPDGCDWNPYRLGNTSFYGPGSSFTLDTTKKLTVVTQFETSGAINRYYVQNGVTFQQPNAELGSYSGNELNDDYCTAEEAEFGGSSFSDKGGLTQFKKATSGGMVLVMSLWDDYYANMLWLDSTYPTNETSSTPGAVRGSCSTSSGVPAQVESQSPNAKVTFSNIKFGPIGSTGNPSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords CELLULOSE 1,4-BETA-CELLOBIOSIDASE
publication title Structural Insights Into the Inhibition of Cellobiohydrolase Cel7A by Xylooligosaccharides.
pubmed doi rcsb
source organism Hypocrea jecorina
total genus 134
structure length 434
sequence length 434
ec nomenclature ec 3.2.1.91: Cellulose 1,4-beta-cellobiosidase (non-reducing end).
pdb deposition date 2014-11-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00840 Glyco_hydro_7 Glycosyl hydrolase family 7
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.100.10 Mainly Beta Distorted Sandwich 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A Glycoside hydrolase, family 7, domain 4d5jA00
2A39A 4ZZPA 4ZZWA 2RFWA 1EG1A 1OVWA 7CELA 4OVWA 3PFZA 4P1HA 4V20A 2RG0A 4ZZTA 1Q2BA 2V3RA 1EGNA 2CELA 4UWTA 5CELA 3PFJA 2YOKA 4D5OA 1A39A 4HAQA 4ZZUA 4XEBA 4D5JA 1OJKA 4D5VA 3OVWA 6CELA 4P1JA 1GPIA 1DY4A 1Z3VA 2RFYA 2RFZA 2Y9NA 4GWAA 4IPMA 4V1ZA 4C4DA 4V0ZA 4D5IA 4D5QA 1DYMA 1OJJA 4CSIA 2V3IA 1CELA 3CELA 3PL3A 1Q2EA 1Z3TA 2XSPA 1Z3WA 1Q9HA 2YG1A 3PFXA 4HAPA 4XNNA 4C4CA 5AMPA 2OVWA 4D5PA 4ZZVA 4ZZQA 1OJIA 4CELA 1H46X
chains in the Genus database with same CATH superfamily
2A39A 4ZZPA 4ZZWA 2RFWA 1EG1A 1OVWA 7CELA 4OVWA 3PFZA 4P1HA 4V20A 2RG0A 4ZZTA 1Q2BA 2V3RA 1EGNA 2CELA 4UWTA 5CELA 3PFJA 2YOKA 4D5OA 1A39A 4HAQA 4ZZUA 4XEBA 4D5JA 1OJKA 4D5VA 3OVWA 6CELA 4P1JA 1GPIA 1DY4A 1Z3VA 2RFYA 2RFZA 2Y9NA 4GWAA 4IPMA 4V1ZA 4C4DA 4V0ZA 4D5IA 4D5QA 1DYMA 1OJJA 4CSIA 2V3IA 1CELA 3CELA 3PL3A 1Q2EA 1Z3TA 2XSPA 1Z3WA 1Q9HA 2YG1A 3PFXA 4HAPA 4XNNA 4C4CA 5AMPA 2OVWA 4D5PA 4ZZVA 4ZZQA 1OJIA 4CELA 1H46X
chains in the Genus database with same CATH topology
2A39A 4ZZPA 4ZZWA 2RFWA 1EG1A 1OVWA 7CELA 4OVWA 3PFZA 4P1HA 4V20A 2RG0A 4ZZTA 1Q2BA 2V3RA 1EGNA 2CELA 4UWTA 5CELA 3PFJA 2YOKA 4D5OA 1A39A 4HAQA 4ZZUA 4XEBA 4D5JA 1OJKA 4D5VA 3OVWA 6CELA 4P1JA 1GPIA 1DY4A 1Z3VA 2RFYA 2RFZA 2Y9NA 4GWAA 4IPMA 4V1ZA 4C4DA 4V0ZA 4D5IA 4D5QA 1DYMA 1OJJA 4CSIA 2V3IA 1CELA 3CELA 3PL3A 1Q2EA 1Z3TA 2XSPA 1Z3WA 1Q9HA 2YG1A 3PFXA 4HAPA 4XNNA 4C4CA 5AMPA 2OVWA 4D5PA 4ZZVA 4ZZQA 1OJIA 4CELA 1H46X
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A39 A;  4ZZP A;  4ZZW A;  2RFW A;  1EG1 A;  1OVW A;  7CEL A;  4OVW A;  3PFZ A;  4P1H A;  4V20 A;  2RG0 A;  4ZZT A;  1Q2B A;  2V3R A;  1EGN A;  2CEL A;  4UWT A;  5CEL A;  3PFJ A;  2YOK A;  4D5O A;  1A39 A;  4HAQ A;  4ZZU A;  4XEB A;  4D5J A;  1OJK A;  4D5V A;  3OVW A;  6CEL A;  4P1J A;  1GPI A;  1DY4 A;  1Z3V A;  2RFY A;  2RFZ A;  2Y9N A;  4GWA A;  4IPM A;  4V1Z A;  4C4D A;  4V0Z A;  4D5I A;  4D5Q A;  1DYM A;  1OJJ A;  4CSI A;  2V3I A;  1CEL A;  3CEL A;  3PL3 A;  1Q2E A;  1Z3T A;  2XSP A;  1Z3W A;  1Q9H A;  2YG1 A;  3PFX A;  4HAP A;  4XNN A;  4C4C A;  5AMP A;  2OVW A;  4D5P A;  4ZZV A;  4ZZQ A;  1OJI A;  4CEL A;  1H46 X; 
#chains in the Genus database with same CATH topology
 2A39 A;  4ZZP A;  4ZZW A;  2RFW A;  1EG1 A;  1OVW A;  7CEL A;  4OVW A;  3PFZ A;  4P1H A;  4V20 A;  2RG0 A;  4ZZT A;  1Q2B A;  2V3R A;  1EGN A;  2CEL A;  4UWT A;  5CEL A;  3PFJ A;  2YOK A;  4D5O A;  1A39 A;  4HAQ A;  4ZZU A;  4XEB A;  4D5J A;  1OJK A;  4D5V A;  3OVW A;  6CEL A;  4P1J A;  1GPI A;  1DY4 A;  1Z3V A;  2RFY A;  2RFZ A;  2Y9N A;  4GWA A;  4IPM A;  4V1Z A;  4C4D A;  4V0Z A;  4D5I A;  4D5Q A;  1DYM A;  1OJJ A;  4CSI A;  2V3I A;  1CEL A;  3CEL A;  3PL3 A;  1Q2E A;  1Z3T A;  2XSP A;  1Z3W A;  1Q9H A;  2YG1 A;  3PFX A;  4HAP A;  4XNN A;  4C4C A;  5AMP A;  2OVW A;  4D5P A;  4ZZV A;  4ZZQ A;  1OJI A;  4CEL A;  1H46 X; 
#chains in the Genus database with same CATH homology
 2A39 A;  4ZZP A;  4ZZW A;  2RFW A;  1EG1 A;  1OVW A;  7CEL A;  4OVW A;  3PFZ A;  4P1H A;  4V20 A;  2RG0 A;  4ZZT A;  1Q2B A;  2V3R A;  1EGN A;  2CEL A;  4UWT A;  5CEL A;  3PFJ A;  2YOK A;  4D5O A;  1A39 A;  4HAQ A;  4ZZU A;  4XEB A;  4D5J A;  1OJK A;  4D5V A;  3OVW A;  6CEL A;  4P1J A;  1GPI A;  1DY4 A;  1Z3V A;  2RFY A;  2RFZ A;  2Y9N A;  4GWA A;  4IPM A;  4V1Z A;  4C4D A;  4V0Z A;  4D5I A;  4D5Q A;  1DYM A;  1OJJ A;  4CSI A;  2V3I A;  1CEL A;  3CEL A;  3PL3 A;  1Q2E A;  1Z3T A;  2XSP A;  1Z3W A;  1Q9H A;  2YG1 A;  3PFX A;  4HAP A;  4XNN A;  4C4C A;  5AMP A;  2OVW A;  4D5P A;  4ZZV A;  4ZZQ A;  1OJI A;  4CEL A;  1H46 X; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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