4D5VA

Hypocrea jecorina cellobiohydrolase cel7a e217q soaked with xylotetraose.
Total Genus 131
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
434
structure length
434
Chain Sequence
ESACTLQSETHPPLTWQKCSSGGTCTQQTGSVVIDANWRWTHATNSSTNCYDGNTWSSTLCPDNETCAKNCCLDGAAYASTYGVTTSGNSLSIDFVTQSAQKNVGARLYLMASDTTYQEFTLLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVSKYPTNTAGAKYGTGYCDSQCPRDLKFINGQANVEGWEPSSNNANTGIGGHGSCCSEMDIWQANSISEALTPHPCTTVGQEICEGDGCGGTYSDNRYGGTCDPDGCDWNPYRLGNTSFYGPGSSFTLDTTKKLTVVTQFETSGAINRYYVQNGVTFQQPNAELGSYSGNELNDDYCTAEEAEFGGSSFSDKGGLTQFKKATSGGMVLVMSLWDDYYANMLWLDSTYPTNETSSTPGAVRGSCSTSSGVPAQVESQSPNAKVTFSNIKFGPIGSTGNPSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords CELLULOSE 1,4-BETA-CELLOBIOSIDASE
publication title Structural Insights Into the Inhibition of Cellobiohydrolase Cel7A by Xylooligosaccharides.
pubmed doi rcsb
source organism Hypocrea jecorina
total genus 131
structure length 434
sequence length 434
ec nomenclature ec 3.2.1.91: Cellulose 1,4-beta-cellobiosidase (non-reducing end).
pdb deposition date 2014-11-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00840 Glyco_hydro_7 Glycosyl hydrolase family 7
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.100.10 Mainly Beta Distorted Sandwich 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A Glycoside hydrolase, family 7, domain 4d5vA00
3PFXA 5AMPA 4IPMA 4OVWA 2RG0A 2XSPA 1EGNA 4P1HA 4V20A 1OJKA 2CELA 4GWAA 3PFJA 4C4CA 1Z3TA 3CELA 4D5JA 1DY4A 1Q9HA 2YOKA 3OVWA 4D5IA 2A39A 1Q2BA 4CELA 4V1ZA 4D5QA 4D5VA 1OVWA 4P1JA 1GPIA 1OJIA 1EG1A 2V3RA 1H46X 4C4DA 4D5PA 3PL3A 4ZZVA 1OJJA 1Z3VA 2YG1A 4CSIA 7CELA 4V0ZA 1Z3WA 2RFZA 5CELA 1CELA 6CELA 4ZZQA 2Y9NA 4D5OA 4ZZUA 1A39A 4ZZTA 2OVWA 2RFWA 4HAPA 4UWTA 4ZZWA 1Q2EA 4ZZPA 4XEBA 3PFZA 1DYMA 4XNNA 2V3IA 4HAQA 2RFYA
chains in the Genus database with same CATH superfamily
3PFXA 5AMPA 4IPMA 4OVWA 2RG0A 2XSPA 1EGNA 4P1HA 4V20A 1OJKA 2CELA 4GWAA 3PFJA 4C4CA 1Z3TA 3CELA 4D5JA 1DY4A 1Q9HA 2YOKA 3OVWA 4D5IA 2A39A 1Q2BA 4CELA 4V1ZA 4D5QA 4D5VA 1OVWA 4P1JA 1GPIA 1OJIA 1EG1A 2V3RA 1H46X 4C4DA 4D5PA 3PL3A 4ZZVA 1OJJA 1Z3VA 2YG1A 4CSIA 7CELA 4V0ZA 1Z3WA 2RFZA 5CELA 1CELA 6CELA 4ZZQA 2Y9NA 4D5OA 4ZZUA 1A39A 4ZZTA 2OVWA 2RFWA 4HAPA 4UWTA 4ZZWA 1Q2EA 4ZZPA 4XEBA 3PFZA 1DYMA 4XNNA 2V3IA 4HAQA 2RFYA
chains in the Genus database with same CATH topology
3PFXA 5AMPA 4IPMA 4OVWA 2RG0A 2XSPA 1EGNA 4P1HA 4V20A 1OJKA 2CELA 4GWAA 3PFJA 4C4CA 1Z3TA 3CELA 4D5JA 1DY4A 1Q9HA 2YOKA 3OVWA 4D5IA 2A39A 1Q2BA 4CELA 4V1ZA 4D5QA 4D5VA 1OVWA 4P1JA 1GPIA 1OJIA 1EG1A 2V3RA 1H46X 4C4DA 4D5PA 3PL3A 4ZZVA 1OJJA 1Z3VA 2YG1A 4CSIA 7CELA 4V0ZA 1Z3WA 2RFZA 5CELA 1CELA 6CELA 4ZZQA 2Y9NA 4D5OA 4ZZUA 1A39A 4ZZTA 2OVWA 2RFWA 4HAPA 4UWTA 4ZZWA 1Q2EA 4ZZPA 4XEBA 3PFZA 1DYMA 4XNNA 2V3IA 4HAQA 2RFYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PFX A;  5AMP A;  4IPM A;  4OVW A;  2RG0 A;  2XSP A;  1EGN A;  4P1H A;  4V20 A;  1OJK A;  2CEL A;  4GWA A;  3PFJ A;  4C4C A;  1Z3T A;  3CEL A;  4D5J A;  1DY4 A;  1Q9H A;  2YOK A;  3OVW A;  4D5I A;  2A39 A;  1Q2B A;  4CEL A;  4V1Z A;  4D5Q A;  4D5V A;  1OVW A;  4P1J A;  1GPI A;  1OJI A;  1EG1 A;  2V3R A;  1H46 X;  4C4D A;  4D5P A;  3PL3 A;  4ZZV A;  1OJJ A;  1Z3V A;  2YG1 A;  4CSI A;  7CEL A;  4V0Z A;  1Z3W A;  2RFZ A;  5CEL A;  1CEL A;  6CEL A;  4ZZQ A;  2Y9N A;  4D5O A;  4ZZU A;  1A39 A;  4ZZT A;  2OVW A;  2RFW A;  4HAP A;  4UWT A;  4ZZW A;  1Q2E A;  4ZZP A;  4XEB A;  3PFZ A;  1DYM A;  4XNN A;  2V3I A;  4HAQ A;  2RFY A; 
#chains in the Genus database with same CATH topology
 3PFX A;  5AMP A;  4IPM A;  4OVW A;  2RG0 A;  2XSP A;  1EGN A;  4P1H A;  4V20 A;  1OJK A;  2CEL A;  4GWA A;  3PFJ A;  4C4C A;  1Z3T A;  3CEL A;  4D5J A;  1DY4 A;  1Q9H A;  2YOK A;  3OVW A;  4D5I A;  2A39 A;  1Q2B A;  4CEL A;  4V1Z A;  4D5Q A;  4D5V A;  1OVW A;  4P1J A;  1GPI A;  1OJI A;  1EG1 A;  2V3R A;  1H46 X;  4C4D A;  4D5P A;  3PL3 A;  4ZZV A;  1OJJ A;  1Z3V A;  2YG1 A;  4CSI A;  7CEL A;  4V0Z A;  1Z3W A;  2RFZ A;  5CEL A;  1CEL A;  6CEL A;  4ZZQ A;  2Y9N A;  4D5O A;  4ZZU A;  1A39 A;  4ZZT A;  2OVW A;  2RFW A;  4HAP A;  4UWT A;  4ZZW A;  1Q2E A;  4ZZP A;  4XEB A;  3PFZ A;  1DYM A;  4XNN A;  2V3I A;  4HAQ A;  2RFY A; 
#chains in the Genus database with same CATH homology
 3PFX A;  5AMP A;  4IPM A;  4OVW A;  2RG0 A;  2XSP A;  1EGN A;  4P1H A;  4V20 A;  1OJK A;  2CEL A;  4GWA A;  3PFJ A;  4C4C A;  1Z3T A;  3CEL A;  4D5J A;  1DY4 A;  1Q9H A;  2YOK A;  3OVW A;  4D5I A;  2A39 A;  1Q2B A;  4CEL A;  4V1Z A;  4D5Q A;  4D5V A;  1OVW A;  4P1J A;  1GPI A;  1OJI A;  1EG1 A;  2V3R A;  1H46 X;  4C4D A;  4D5P A;  3PL3 A;  4ZZV A;  1OJJ A;  1Z3V A;  2YG1 A;  4CSI A;  7CEL A;  4V0Z A;  1Z3W A;  2RFZ A;  5CEL A;  1CEL A;  6CEL A;  4ZZQ A;  2Y9N A;  4D5O A;  4ZZU A;  1A39 A;  4ZZT A;  2OVW A;  2RFW A;  4HAP A;  4UWT A;  4ZZW A;  1Q2E A;  4ZZP A;  4XEB A;  3PFZ A;  1DYM A;  4XNN A;  2V3I A;  4HAQ A;  2RFY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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