4F5TA

Crystal structure of equine serum albumin
Total Genus 236
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
236
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Structures of bovine, equine and leporine serum albumin.
pubmed doi rcsb
total genus 236
structure length 583
sequence length 583
ec nomenclature
pdb deposition date 2012-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5tA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5tA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5tA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5tA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5tA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5tA05
1E7IA 4L9QA 3A73A 1BKEA 4LUHA 3LU6A 5ID9A 3V03A 3UIVA 2XSIA 3LU7A 4F5SA 2VUFA 1UORA 1H9ZA 2XVVA 3TDLA 4OT2A 4IW1A 1E7GA 3LU8A 1TF0A 4ZBRA 2BX8A 2BXNA 2BXOA 4F5TA 4LB2A 1GNJA 3SQJA 2BXMA 1E7BA 5GHKA 2XW1A 1KXPD 4J2VA 2XVWA 2BXBA 2VUEA 1HA2A 4L8UA 1BJ5A 3JQZA 5IIHA 4PO0A 2I2ZA 1E7AA 1HK5A 5IJEA 4ZBQA 2BXDA 3V08A 3B9MA 4S1YA 4E99A 2I30A 5ID7A 5DQFA 5IIXA 1KW2A 3CX9A 4EMXA 1O9XA 4HGKA 4OR0A 3B9LA 2YDFA 1E7CA 4Z69A 4LA0A 2BXAA 4G04A 1E78A 4IW2A 2BXLA 1E7HA 2BXCA 1HK1A 2BXKA 5DBYA 1MA9A 4LB9A 1J7EA 4BKEA 4K71A 4LUFA 5IJFA 2BXHA 2BXIA 4JK4A 5IFOA 1E7EA 4F5VA 4HGMB 4G03A 1GNIA 2BXPA 1HK3A 1LOTA 5HOZA 1HK4A 2VDBA 3V09A 1HK2A 5IIUA 2BXEA 4L9KA 1BM0A 2XW0A 4N0FD 5FUOA 4F5UA 2BXGA 1J78A 2BXFA 2XVQA 1N5UA 2BXQA 5IJ5A 1E7FA 4N0UD 4K2CA 2XVUA 3JRYA 1AO6A
chains in the Genus database with same CATH superfamily
4NAWB 1E7IA 3WHRA 4L9QA 2KBZA 3A73A 1BKEA 4DHXB 2LQIA 4LUHA 1H5WA 3LU6A 5ID9A 3V03A 4ZBKA 3UIVA 3ECPA 2XSIA 4Z9OA 2OT3A 4TQ0A 5BPKA 2ROHA 3LU7A 3NMUA 3BPJA 4F5SA 3G9KD 2VUFA 1UORA 2AGHB 1VZSA 4D7XA 4I9OA 2LOQA 1H9ZA 2QMCA 2XVVA 4OT2A 3TDLA 3VQIA 5B5TA 4IW1A 1E7GA 3LU8A 1TF0A 3GQUA 2BX8A 4ZBRA 4DM0A 2BXNA 3ICXA 3SIVB 4ZC6A 2BXOA 4F5TA 4LB2A 1GNJA 3SQJA 2BXMA 1E7BA 5GINA 5GHKA 2XW1A 1KXPD 4TQ1A 5GIOA 4J2VA 2JUHA 2XVWA 2BXBA 2V36A 1HA2A 2VUEA 4L8UA 1BJ5A 3KJLA 3JQZA 5IIHA 4PO0A 3FWBC 2I2ZA 1MIYA 3NVKA 1E7AA 1HK5A 5IJEA 4ZBQA 2DBUA 2E0XA 2BXDA 3V08A 2LQHA 3B9MA 4S1YA 2QHBA 4E99A 3H3AA 3GA9L 1LNSA 2I30A 3WHQA 5ID7A 5GIPA 2XMOA 2CKXA 2DYOA 2NNWA 5DQFA 5IIXA 2LXTA 1KW2A 2QM6A 3GQXA 2EFDA 4N3ZA 2OZBB 3FNMA 2DBXA 4GG2A 2DG5A 3CX9A 3M99C 4EMXA 3KIKA 4GDLB 1O9XA 4HGKA 2Z8JA 4OR0A 3B9LA 2YDFA 1E7CA 4Z69A 4LA0A 1TXUA 2BXAA 4G04A 1MIVA 1E78A 4ZUXV 4IW2A 2BXLA 1E7HA 2BXKA 2BXCA 1HK1A 4GDXA 2AJEA 1MA9A 2E0YA 4OTTA 5DBYA 2K0NA 4LB9A 1J7EA 2GUTA 1FOUA 4MBEC 2NQOA 4BKEA 4K71A 4LUFA 1JNBA 2DBWA 5IJFA 2BXHA 3MHSB 2BXIA 1MUHA 4JK4A 3SIUB 2LXSA 1VFIA 5IFOA 1E7EA 4F5VA 4HGMB 4G03A 1MM8A 2DYMA 1SB0A 1GNIA 4WA6B 4ZCGA 2BXPA 3NVMA 3NVIA 4FIPB 2EFHA 4BY9C 1HK3A 1LOTA 2EFCA 2KWFA 3PLAA 5HOZA 5D7GA 1HK4A 3W1SA 3FWCC 2EFEA 2VDBA 3V09A 1HK2A 5IIUA 1IJGA 2BXEA 2Z8IA 3A75A 4L9KA 1MUSA 1BM0A 1NT2B 4M70B 4FK5B 4G01A 2XW0A 4N0FD 3MHHB 5FUOA 4F5UA 3H37A 4OTUA 2BXGA 1J78A 2BXFA 2XVQA 3WHSA 1N5UA 2BXQA 4FJCB 5IJ5A 1E7FA 4N0UD 1KDXA 4K2CA 4W4UB 2XVUA 1MIWA 4C31B 4GDKB 3JRYA 2Z8KA 1AO6A
chains in the Genus database with same CATH topology
4NAWB 1E7IA 3WHRA 4L9QA 2KBZA 3A73A 1BKEA 4DHXB 4LUHA 1H5WA 3LU6A 5ID9A 3V03A 4ZBKA 3UIVA 2XSIA 4Z9OA 2OT3A 4TQ0A 5BPKA 2ROHA 3LU7A 3NMUA 4F5SA 3G9KD 2VUFA 1UORA 1VZSA 2LOQA 1H9ZA 2QMCA 2XVVA 4OT2A 3TDLA 3VQIA 5B5TA 4IW1A 1E7GA 3LU8A 1TF0A 3GQUA 2BX8A 4ZBRA 2BXNA 3ICXA 3SIVB 4ZC6A 2BXOA 4F5TA 4LB2A 1GNJA 3SQJA 2BXMA 1E7BA 5GINA 5GHKA 2XW1A 1KXPD 4TQ1A 5GIOA 4J2VA 2JUHA 2XVWA 2BXBA 2V36A 1HA2A 2VUEA 4L8UA 1BJ5A 3KJLA 3JQZA 5IIHA 4PO0A 3FWBC 2I2ZA 1MIYA 3NVKA 1E7AA 1HK5A 5IJEA 4ZBQA 2DBUA 2E0XA 2BXDA 3V08A 3B9MA 4S1YA 2QHBA 4E99A 3H3AA 3GA9L 1LNSA 2I30A 3WHQA 5ID7A 5GIPA 2XMOA 2CKXA 2DYOA 2NNWA 5DQFA 5IIXA 1KW2A 2QM6A 3GQXA 2EFDA 4N3ZA 2OZBB 3FNMA 2DBXA 4GG2A 2DG5A 3CX9A 3M99C 4EMXA 3KIKA 4GDLB 1O9XA 4HGKA 2Z8JA 4OR0A 3B9LA 2YDFA 1E7CA 4Z69A 4LA0A 1TXUA 2BXAA 4G04A 1MIVA 1E78A 4ZUXV 4IW2A 2BXLA 1E7HA 2BXCA 1HK1A 2BXKA 4GDXA 2AJEA 1MA9A 2E0YA 4OTTA 5DBYA 4LB9A 1J7EA 1FOUA 4MBEC 2NQOA 4BKEA 4K71A 4LUFA 1JNBA 2DBWA 5IJFA 2BXHA 3MHSB 2BXIA 4JK4A 3SIUB 1VFIA 5IFOA 1E7EA 4F5VA 4HGMB 4G03A 2DYMA 1GNIA 4WA6B 4ZCGA 2BXPA 3NVMA 3NVIA 4FIPB 2EFHA 4BY9C 1HK3A 1LOTA 2EFCA 3PLAA 5HOZA 5D7GA 1HK4A 3W1SA 3FWCC 2EFEA 2VDBA 3V09A 1HK2A 5IIUA 1IJGA 2BXEA 2Z8IA 3A75A 4L9KA 1BM0A 1NT2B 4M70B 4FK5B 4G01A 2XW0A 4N0FD 3MHHB 5FUOA 4F5UA 3H37A 4OTUA 2BXGA 1J78A 2BXFA 2XVQA 3WHSA 1N5UA 2BXQA 4FJCB 5IJ5A 1E7FA 4N0UD 4K2CA 4W4UB 2XVUA 1MIWA 4C31B 4GDKB 3JRYA 2Z8KA 1AO6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E7I A;  4L9Q A;  3A73 A;  1BKE A;  4LUH A;  3LU6 A;  5ID9 A;  3V03 A;  3UIV A;  2XSI A;  3LU7 A;  4F5S A;  2VUF A;  1UOR A;  1H9Z A;  2XVV A;  3TDL A;  4OT2 A;  4IW1 A;  1E7G A;  3LU8 A;  1TF0 A;  4ZBR A;  2BX8 A;  2BXN A;  2BXO A;  4F5T A;  4LB2 A;  1GNJ A;  3SQJ A;  2BXM A;  1E7B A;  5GHK A;  2XW1 A;  1KXP D;  4J2V A;  2XVW A;  2BXB A;  2VUE A;  1HA2 A;  4L8U A;  1BJ5 A;  3JQZ A;  5IIH A;  4PO0 A;  2I2Z A;  1E7A A;  1HK5 A;  5IJE A;  4ZBQ A;  2BXD A;  3V08 A;  3B9M A;  4S1Y A;  4E99 A;  2I30 A;  5ID7 A;  5DQF A;  5IIX A;  1KW2 A;  3CX9 A;  4EMX A;  1O9X A;  4HGK A;  4OR0 A;  3B9L A;  2YDF A;  1E7C A;  4Z69 A;  4LA0 A;  2BXA A;  4G04 A;  1E78 A;  4IW2 A;  2BXL A;  1E7H A;  2BXC A;  1HK1 A;  2BXK A;  5DBY A;  1MA9 A;  4LB9 A;  1J7E A;  4BKE A;  4K71 A;  4LUF A;  5IJF A;  2BXH A;  2BXI A;  4JK4 A;  5IFO A;  1E7E A;  4F5V A;  4HGM B;  4G03 A;  1GNI A;  2BXP A;  1HK3 A;  1LOT A;  5HOZ A;  1HK4 A;  2VDB A;  3V09 A;  1HK2 A;  5IIU A;  2BXE A;  4L9K A;  1BM0 A;  2XW0 A;  4N0F D;  5FUO A;  4F5U A;  2BXG A;  1J78 A;  2BXF A;  2XVQ A;  1N5U A;  2BXQ A;  5IJ5 A;  1E7F A;  4N0U D;  4K2C A;  2XVU A;  3JRY A;  1AO6 A; 
#chains in the Genus database with same CATH topology
 4NAW B;  1E7I A;  3WHR A;  4L9Q A;  2KBZ A;  3A73 A;  1BKE A;  4DHX B;  2LQI A;  4LUH A;  1H5W A;  3LU6 A;  5ID9 A;  3V03 A;  4ZBK A;  3UIV A;  3ECP A;  2XSI A;  4Z9O A;  2OT3 A;  4TQ0 A;  5BPK A;  2ROH A;  3LU7 A;  3NMU A;  3BPJ A;  4F5S A;  3G9K D;  2VUF A;  1UOR A;  2AGH B;  1VZS A;  4D7X A;  4I9O A;  2LOQ A;  1H9Z A;  2QMC A;  2XVV A;  4OT2 A;  3TDL A;  3VQI A;  5B5T A;  4IW1 A;  1E7G A;  3LU8 A;  1TF0 A;  3GQU A;  2BX8 A;  4ZBR A;  4DM0 A;  2BXN A;  3ICX A;  3SIV B;  4ZC6 A;  2BXO A;  4F5T A;  4LB2 A;  1GNJ A;  3SQJ A;  2BXM A;  1E7B A;  5GIN A;  5GHK A;  2XW1 A;  1KXP D;  4TQ1 A;  5GIO A;  4J2V A;  2JUH A;  2XVW A;  2BXB A;  2V36 A;  1HA2 A;  2VUE A;  4L8U A;  1BJ5 A;  3KJL A;  3JQZ A;  5IIH A;  4PO0 A;  3FWB C;  2I2Z A;  1MIY A;  3NVK A;  1E7A A;  1HK5 A;  5IJE A;  4ZBQ A;  2DBU A;  2E0X A;  2BXD A;  3V08 A;  2LQH A;  3B9M A;  4S1Y A;  2QHB A;  4E99 A;  3H3A A;  3GA9 L;  1LNS A;  2I30 A;  3WHQ A;  5ID7 A;  5GIP A;  2XMO A;  2CKX A;  2DYO A;  2NNW A;  5DQF A;  5IIX A;  2LXT A;  1KW2 A;  2QM6 A;  3GQX A;  2EFD A;  4N3Z A;  2OZB B;  3FNM A;  2DBX A;  4GG2 A;  2DG5 A;  3CX9 A;  3M99 C;  4EMX A;  3KIK A;  4GDL B;  1O9X A;  4HGK A;  2Z8J A;  4OR0 A;  3B9L A;  2YDF A;  1E7C A;  4Z69 A;  4LA0 A;  1TXU A;  2BXA A;  4G04 A;  1MIV A;  1E78 A;  4ZUX V;  4IW2 A;  2BXL A;  1E7H A;  2BXK A;  2BXC A;  1HK1 A;  4GDX A;  2AJE A;  1MA9 A;  2E0Y A;  4OTT A;  5DBY A;  2K0N A;  4LB9 A;  1J7E A;  2GUT A;  1FOU A;  4MBE C;  2NQO A;  4BKE A;  4K71 A;  4LUF A;  1JNB A;  2DBW A;  5IJF A;  2BXH A;  3MHS B;  2BXI A;  1MUH A;  4JK4 A;  3SIU B;  2LXS A;  1VFI A;  5IFO A;  1E7E A;  4F5V A;  4HGM B;  4G03 A;  1MM8 A;  2DYM A;  1SB0 A;  1GNI A;  4WA6 B;  4ZCG A;  2BXP A;  3NVM A;  3NVI A;  4FIP B;  2EFH A;  4BY9 C;  1HK3 A;  1LOT A;  2EFC A;  2KWF A;  3PLA A;  5HOZ A;  5D7G A;  1HK4 A;  3W1S A;  3FWC C;  2EFE A;  2VDB A;  3V09 A;  1HK2 A;  5IIU A;  1IJG A;  2BXE A;  2Z8I A;  3A75 A;  4L9K A;  1MUS A;  1BM0 A;  1NT2 B;  4M70 B;  4FK5 B;  4G01 A;  2XW0 A;  4N0F D;  3MHH B;  5FUO A;  4F5U A;  3H37 A;  4OTU A;  2BXG A;  1J78 A;  2BXF A;  2XVQ A;  3WHS A;  1N5U A;  2BXQ A;  4FJC B;  5IJ5 A;  1E7F A;  4N0U D;  1KDX A;  4K2C A;  4W4U B;  2XVU A;  1MIW A;  4C31 B;  4GDK B;  3JRY A;  2Z8K A;  1AO6 A; 
#chains in the Genus database with same CATH homology
 4NAW B;  1E7I A;  3WHR A;  4L9Q A;  2KBZ A;  3A73 A;  1BKE A;  4DHX B;  4LUH A;  1H5W A;  3LU6 A;  5ID9 A;  3V03 A;  4ZBK A;  3UIV A;  2XSI A;  4Z9O A;  2OT3 A;  4TQ0 A;  5BPK A;  2ROH A;  3LU7 A;  3NMU A;  4F5S A;  3G9K D;  2VUF A;  1UOR A;  1VZS A;  2LOQ A;  1H9Z A;  2QMC A;  2XVV A;  4OT2 A;  3TDL A;  3VQI A;  5B5T A;  4IW1 A;  1E7G A;  3LU8 A;  1TF0 A;  3GQU A;  2BX8 A;  4ZBR A;  2BXN A;  3ICX A;  3SIV B;  4ZC6 A;  2BXO A;  4F5T A;  4LB2 A;  1GNJ A;  3SQJ A;  2BXM A;  1E7B A;  5GIN A;  5GHK A;  2XW1 A;  1KXP D;  4TQ1 A;  5GIO A;  4J2V A;  2JUH A;  2XVW A;  2BXB A;  2V36 A;  1HA2 A;  2VUE A;  4L8U A;  1BJ5 A;  3KJL A;  3JQZ A;  5IIH A;  4PO0 A;  3FWB C;  2I2Z A;  1MIY A;  3NVK A;  1E7A A;  1HK5 A;  5IJE A;  4ZBQ A;  2DBU A;  2E0X A;  2BXD A;  3V08 A;  3B9M A;  4S1Y A;  2QHB A;  4E99 A;  3H3A A;  3GA9 L;  1LNS A;  2I30 A;  3WHQ A;  5ID7 A;  5GIP A;  2XMO A;  2CKX A;  2DYO A;  2NNW A;  5DQF A;  5IIX A;  1KW2 A;  2QM6 A;  3GQX A;  2EFD A;  4N3Z A;  2OZB B;  3FNM A;  2DBX A;  4GG2 A;  2DG5 A;  3CX9 A;  3M99 C;  4EMX A;  3KIK A;  4GDL B;  1O9X A;  4HGK A;  2Z8J A;  4OR0 A;  3B9L A;  2YDF A;  1E7C A;  4Z69 A;  4LA0 A;  1TXU A;  2BXA A;  4G04 A;  1MIV A;  1E78 A;  4ZUX V;  4IW2 A;  2BXL A;  1E7H A;  2BXC A;  1HK1 A;  2BXK A;  4GDX A;  2AJE A;  1MA9 A;  2E0Y A;  4OTT A;  5DBY A;  4LB9 A;  1J7E A;  1FOU A;  4MBE C;  2NQO A;  4BKE A;  4K71 A;  4LUF A;  1JNB A;  2DBW A;  5IJF A;  2BXH A;  3MHS B;  2BXI A;  4JK4 A;  3SIU B;  1VFI A;  5IFO A;  1E7E A;  4F5V A;  4HGM B;  4G03 A;  2DYM A;  1GNI A;  4WA6 B;  4ZCG A;  2BXP A;  3NVM A;  3NVI A;  4FIP B;  2EFH A;  4BY9 C;  1HK3 A;  1LOT A;  2EFC A;  3PLA A;  5HOZ A;  5D7G A;  1HK4 A;  3W1S A;  3FWC C;  2EFE A;  2VDB A;  3V09 A;  1HK2 A;  5IIU A;  1IJG A;  2BXE A;  2Z8I A;  3A75 A;  4L9K A;  1BM0 A;  1NT2 B;  4M70 B;  4FK5 B;  4G01 A;  2XW0 A;  4N0F D;  3MHH B;  5FUO A;  4F5U A;  3H37 A;  4OTU A;  2BXG A;  1J78 A;  2BXF A;  2XVQ A;  3WHS A;  1N5U A;  2BXQ A;  4FJC B;  5IJ5 A;  1E7F A;  4N0U D;  4K2C A;  4W4U B;  2XVU A;  1MIW A;  4C31 B;  4GDK B;  3JRY A;  2Z8K A;  1AO6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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