4KS6A

Crystal structure of the catalytic domain of botulinum neurotoxin bont/a c134s mutant with covalent inhibitor that modifies cys-165 causing disorder in 166-174 stretch
Total Genus 141
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
428
structure length
428
Chain Sequence
GSHMPFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNSINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLFEF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Botulinum neurotoxin A light chain
publication title Covalent modification of the active site cysteine stresses Clostridium botulinum neurotoxin A
rcsb
source organism Clostridium botulinum a
total genus 141
structure length 428
sequence length 428
ec nomenclature ec 3.4.24.69: Bontoxilysin.
pdb deposition date 2013-05-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 4ks6A00
3QIZA 3ZUQA 3DDBA 3C88A 3D3XA 3FIEA 1ZL6A 3ZUSA 1EPWA 2NYYA 1XTFA 1T3AA 1G9AA 5BQNA 1ZN3A 3V0AA 1S0BA 2ETFA 3QW6A 2ILPA 2ISGA 4J1LA 3FIIA 1E1HA 4KTXA 1YVGA 4ZJXA 2G7QA 3VUOA 2W2DA 3QW7A 2FPQA 2A8AA 3QW5A 3K3QB 2IMAA 3BOOA 3V0AB 5BQMA 2ISHA 3FFZA 4ZKTB 3DEBA 2G7KA 4KS6A 1S0DA 1I1EA 2XHLA 3DS9A 3QIYA 1XTGA 3C8AA 3QW8A 4KUFA 1G9BA 4EL4A 3BWIA 3BOKA 3C89A 1S0CA 1ZKWA 2IMBA 3QIXA 2QN0A 2NP0A 2A97A 1Z7HA 3DDAA 2IMCA 3V0BB 3V0BA 3C8BA 3BONA 1S0EA 4EJ5A 2ISEA 1F82A 1G9DA 4HEVA 1F31A 4ELCA 3NF3A 2NZ9A 1ZKXA 1S0FA 1ZL5A 3QJ0A 1S0GA 1ZB7A 3ZURA 1G9CA 1T3CA 3BTAA 2G7PA 2G7NA 3DSEA
chains in the Genus database with same CATH superfamily
3QIZA 3ZUQA 3DDBA 3C88A 3D3XA 4QHFA 3FIEA 1ZL6A 3ZUSA 1EPWA 2NYYA 1XTFA 1T3AA 1G9AA 4IL3A 2YPTA 4AW6A 5BQNA 1ZN3A 3V0AA 1S0BA 2ETFA 3QW6A 2ILPA 2ISGA 4J1LA 3FIIA 1E1HA 4KTXA 3CQBA 1YVGA 4ZJXA 2G7QA 3VUOA 2W2DA 3QW7A 2FPQA 2A8AA 3QW5A 3K3QB 2IMAA 3BOOA 3V0AB 5BQMA 2ISHA 3FFZA 4ZKTB 3DEBA 2G7KA 4KS6A 1S0DA 1I1EA 2XHLA 3DS9A 3QIYA 4JIXA 2EJQA 1XTGA 3C8AA 3QW8A 4KUFA 1G9BA 4EL4A 3BWIA 3BOKA 3C89A 1S0CA 1ZKWA 2IMBA 3QIXA 2QN0A 2NP0A 2A97A 1Z7HA 3DDAA 2IMCA 3V0BB 3V0BA 3C8BA 4JIUA 3BONA 1S0EA 4EJ5A 2ISEA 1F82A 1G9DA 4HEVA 1F31A 4ELCA 3E11A 3NF3A 2NZ9A 1ZKXA 1S0FA 1ZL5A 3QJ0A 1S0GA 1ZB7A 3ZURA 1G9CA 1T3CA 3BTAA 2G7PA 2G7NA 3DSEA
chains in the Genus database with same CATH topology
3QIZA 3ZUQA 3DDBA 3C88A 3D3XA 3FIEA 1ZL6A 3ZUSA 1EPWA 2NYYA 1XTFA 1T3AA 1G9AA 5BQNA 1ZN3A 3V0AA 1S0BA 2ETFA 3QW6A 2ILPA 2ISGA 4J1LA 3FIIA 1E1HA 4KTXA 1YVGA 4ZJXA 2G7QA 3VUOA 2W2DA 3QW7A 2FPQA 2A8AA 3QW5A 3K3QB 2IMAA 3BOOA 3V0AB 5BQMA 2ISHA 3FFZA 4ZKTB 3DEBA 2G7KA 4KS6A 1S0DA 1I1EA 2XHLA 3DS9A 3QIYA 1XTGA 3C8AA 3QW8A 4KUFA 1G9BA 4EL4A 3BWIA 3BOKA 3C89A 1S0CA 1ZKWA 2IMBA 3QIXA 2QN0A 2NP0A 2A97A 1Z7HA 3DDAA 2IMCA 3V0BB 3V0BA 3C8BA 3BONA 1S0EA 4EJ5A 2ISEA 1F82A 1G9DA 4HEVA 1F31A 4ELCA 3NF3A 2NZ9A 1ZKXA 1S0FA 1ZL5A 3QJ0A 1S0GA 1ZB7A 3ZURA 1G9CA 1T3CA 3BTAA 2G7PA 2G7NA 3DSEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3QIZ A;  3ZUQ A;  3DDB A;  3C88 A;  3D3X A;  3FIE A;  1ZL6 A;  3ZUS A;  1EPW A;  2NYY A;  1XTF A;  1T3A A;  1G9A A;  5BQN A;  1ZN3 A;  3V0A A;  1S0B A;  2ETF A;  3QW6 A;  2ILP A;  2ISG A;  4J1L A;  3FII A;  1E1H A;  4KTX A;  1YVG A;  4ZJX A;  2G7Q A;  3VUO A;  2W2D A;  3QW7 A;  2FPQ A;  2A8A A;  3QW5 A;  3K3Q B;  2IMA A;  3BOO A;  3V0A B;  5BQM A;  2ISH A;  3FFZ A;  4ZKT B;  3DEB A;  2G7K A;  4KS6 A;  1S0D A;  1I1E A;  2XHL A;  3DS9 A;  3QIY A;  1XTG A;  3C8A A;  3QW8 A;  4KUF A;  1G9B A;  4EL4 A;  3BWI A;  3BOK A;  3C89 A;  1S0C A;  1ZKW A;  2IMB A;  3QIX A;  2QN0 A;  2NP0 A;  2A97 A;  1Z7H A;  3DDA A;  2IMC A;  3V0B B;  3V0B A;  3C8B A;  3BON A;  1S0E A;  4EJ5 A;  2ISE A;  1F82 A;  1G9D A;  4HEV A;  1F31 A;  4ELC A;  3NF3 A;  2NZ9 A;  1ZKX A;  1S0F A;  1ZL5 A;  3QJ0 A;  1S0G A;  1ZB7 A;  3ZUR A;  1G9C A;  1T3C A;  3BTA A;  2G7P A;  2G7N A;  3DSE A; 
#chains in the Genus database with same CATH topology
 3QIZ A;  3ZUQ A;  3DDB A;  3C88 A;  3D3X A;  4QHF A;  3FIE A;  1ZL6 A;  3ZUS A;  1EPW A;  2NYY A;  1XTF A;  1T3A A;  1G9A A;  4IL3 A;  2YPT A;  4AW6 A;  5BQN A;  1ZN3 A;  3V0A A;  1S0B A;  2ETF A;  3QW6 A;  2ILP A;  2ISG A;  4J1L A;  3FII A;  1E1H A;  4KTX A;  3CQB A;  1YVG A;  4ZJX A;  2G7Q A;  3VUO A;  2W2D A;  3QW7 A;  2FPQ A;  2A8A A;  3QW5 A;  3K3Q B;  2IMA A;  3BOO A;  3V0A B;  5BQM A;  2ISH A;  3FFZ A;  4ZKT B;  3DEB A;  2G7K A;  4KS6 A;  1S0D A;  1I1E A;  2XHL A;  3DS9 A;  3QIY A;  4JIX A;  2EJQ A;  1XTG A;  3C8A A;  3QW8 A;  4KUF A;  1G9B A;  4EL4 A;  3BWI A;  3BOK A;  3C89 A;  1S0C A;  1ZKW A;  2IMB A;  3QIX A;  2QN0 A;  2NP0 A;  2A97 A;  1Z7H A;  3DDA A;  2IMC A;  3V0B B;  3V0B A;  3C8B A;  4JIU A;  3BON A;  1S0E A;  4EJ5 A;  2ISE A;  1F82 A;  1G9D A;  4HEV A;  1F31 A;  4ELC A;  3E11 A;  3NF3 A;  2NZ9 A;  1ZKX A;  1S0F A;  1ZL5 A;  3QJ0 A;  1S0G A;  1ZB7 A;  3ZUR A;  1G9C A;  1T3C A;  3BTA A;  2G7P A;  2G7N A;  3DSE A; 
#chains in the Genus database with same CATH homology
 3QIZ A;  3ZUQ A;  3DDB A;  3C88 A;  3D3X A;  3FIE A;  1ZL6 A;  3ZUS A;  1EPW A;  2NYY A;  1XTF A;  1T3A A;  1G9A A;  5BQN A;  1ZN3 A;  3V0A A;  1S0B A;  2ETF A;  3QW6 A;  2ILP A;  2ISG A;  4J1L A;  3FII A;  1E1H A;  4KTX A;  1YVG A;  4ZJX A;  2G7Q A;  3VUO A;  2W2D A;  3QW7 A;  2FPQ A;  2A8A A;  3QW5 A;  3K3Q B;  2IMA A;  3BOO A;  3V0A B;  5BQM A;  2ISH A;  3FFZ A;  4ZKT B;  3DEB A;  2G7K A;  4KS6 A;  1S0D A;  1I1E A;  2XHL A;  3DS9 A;  3QIY A;  1XTG A;  3C8A A;  3QW8 A;  4KUF A;  1G9B A;  4EL4 A;  3BWI A;  3BOK A;  3C89 A;  1S0C A;  1ZKW A;  2IMB A;  3QIX A;  2QN0 A;  2NP0 A;  2A97 A;  1Z7H A;  3DDA A;  2IMC A;  3V0B B;  3V0B A;  3C8B A;  3BON A;  1S0E A;  4EJ5 A;  2ISE A;  1F82 A;  1G9D A;  4HEV A;  1F31 A;  4ELC A;  3NF3 A;  2NZ9 A;  1ZKX A;  1S0F A;  1ZL5 A;  3QJ0 A;  1S0G A;  1ZB7 A;  3ZUR A;  1G9C A;  1T3C A;  3BTA A;  2G7P A;  2G7N A;  3DSE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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