4OOKA

Third metal bound m.tuberculosis methionine aminopeptidase
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
282
structure length
282
Chain Sequence
RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Methionine aminopeptidase 2
publication title Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 88
structure length 282
sequence length 282
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2014-02-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4ookA01
4U71A 2BHAA 3FM3A 1WN1A 2P9AA 4S2TP 3IU9A 5JFRA 3BITA 3CB5A 4FLLA 4RZZA 4B28A 1KQ9A 2BWSA 2BWUA 2EVOA 3D27A 2GGBA 1QXZA 4IKUA 2BHDA 2GU4A 5CDLA 3RORA 1Y1NA 1PV9A 4S01A 4S00A 5FCHA 2V3XA 2Q92A 5E5BA 1YJ3A 2GG9A 1YW7A 3RVAA 1QXWA 1KQ0A 3L24A 1YVMA 4FLKA 1KP0A 2P99A 2P98A 4U6JA 2B3KA 2V3YA 4RZYA 4IKSA 4IU6A 1R58A 1C22A 1CHMA 2GG3A 3Q6DA 5CNXA 3S6BA 2BB7A 4FLJA 1XNZA 2BH3A 4R60A 5FCFA 4U73A 3TB5A 4IDYA 4IKRA 2GZ5A 1N51A 3PKDA 2GU6A 5CIKA 4FKCA 4FO7A 2MATA 3MX6A 2Q95A 1WY2A 2EA2A 2GG2A 4MATA 1BOAA 4A6VA 4EGEA 1YW8A 2ADUA 1JAWA 5CLSA 2BHCA 5CDVA 5CE6A 2GA2A 2GU5A 1QXYA 2GG5A 3BIQA 1W7VA 4Z7MA 4S2RP 1O0XA 4U69A 1XGSA 4FO8A 2NQ6A 1XGNA 2Q93A 4U6WA 4U75A 1B59A 1QZYA 2Q94A 1WLRA 4U76A 1WBQA 4ZWUA 2Q8KA 2ZSGA 4FUKA 5D6FA 2BHBA 1WKMA 2GU7A 4ZNGA 2GTXA 4HXXA 5CDEA 4U6CA 1WL9A 4FLIA 2BWXA 5JHUA 4IPAA 2GG0A 2BN7A 2NQ7A 2BWYA 3PKAA 1B6AA 2EVCA 4PV4A 3CTZA 3IG4A 4ZWOA 4U1BA 1C23A 3MATA 2EVMA 4U6EA 3PKEA 4KM3A 1R5HA 3PKCA 4IKTA 2OKNA 4RGZ1 2BWVA 4ZWPA 4IF7A 2BWTA 5D6EA 3FMRA 2DFIA 1M35A 2IW2A 4QR8A 2HOWA 3CB6A 1MATA 1A16A 1XGOA 2V6CA 3FMQA 4PNCA 5JI6A 1XGMA 2G6PA 4U6ZA 2B3HA 1R5GA 1W2MA 2GG7A 2GGCA 3MR1A 4JUQA 4U70A 1C21A 3IU8A 2BWWA 1BN5A 3TAVA 2OAZA 3PKBA 4IECA 2V3ZA 3IU7A 1C27A 3L7GA 4A6WA 2EA4A 4OOKA 1C24A 2B3LA 2Q96A 2GG8A 1YW9A 3BIPA 1WL6A
chains in the Genus database with same CATH superfamily
4U71A 2BHAA 3FM3A 1WN1A 2P9AA 4S2TP 3IU9A 5JFRA 3BITA 3CB5A 4FLLA 4RZZA 4B28A 1KQ9A 2BWSA 2BWUA 2EVOA 3D27A 2GGBA 1QXZA 4IKUA 2BHDA 2GU4A 5CDLA 3RORA 1Y1NA 1PV9A 4S01A 4S00A 5FCHA 2V3XA 2Q92A 5E5BA 1YJ3A 2GG9A 1YW7A 3RVAA 1QXWA 1KQ0A 3L24A 1YVMA 4FLKA 1KP0A 2P99A 2P98A 4U6JA 2B3KA 2V3YA 4RZYA 4IKSA 4IU6A 1R58A 1C22A 1CHMA 2GG3A 3Q6DA 5CNXA 3S6BA 2BB7A 4FLJA 1XNZA 2BH3A 4R60A 5FCFA 4U73A 3TB5A 4IDYA 4IKRA 2GZ5A 1N51A 3PKDA 2GU6A 5CIKA 4FKCA 4FO7A 2MATA 3MX6A 2Q95A 1WY2A 2EA2A 2GG2A 4MATA 1BOAA 4A6VA 4EGEA 1YW8A 2ADUA 1JAWA 5CLSA 2BHCA 5CDVA 5CE6A 2GA2A 2GU5A 1QXYA 2GG5A 3BIQA 1W7VA 4Z7MA 4S2RP 1O0XA 4U69A 1XGSA 4FO8A 2NQ6A 1XGNA 2Q93A 4U6WA 4U75A 1B59A 1QZYA 2Q94A 1WLRA 4U76A 1WBQA 4ZWUA 2Q8KA 2ZSGA 4FUKA 5D6FA 2BHBA 1WKMA 2GU7A 4ZNGA 2GTXA 4HXXA 5CDEA 4U6CA 1WL9A 4FLIA 2BWXA 5JHUA 4IPAA 2GG0A 2BN7A 2NQ7A 2BWYA 3PKAA 1B6AA 2EVCA 4PV4A 3CTZA 3IG4A 4ZWOA 4U1BA 1C23A 3MATA 2EVMA 4U6EA 3PKEA 4KM3A 1R5HA 3PKCA 4IKTA 2OKNA 4RGZ1 2BWVA 4ZWPA 4IF7A 2BWTA 5D6EA 3FMRA 2DFIA 1M35A 2IW2A 4QR8A 2HOWA 3CB6A 1MATA 1A16A 1XGOA 2V6CA 3FMQA 4PNCA 5JI6A 1XGMA 2G6PA 4U6ZA 2B3HA 1R5GA 1W2MA 2GG7A 2GGCA 3MR1A 4JUQA 4U70A 1C21A 3IU8A 2BWWA 1BN5A 3TAVA 2OAZA 3PKBA 4IECA 2V3ZA 3IU7A 1C27A 3L7GA 4A6WA 2EA4A 4OOKA 1C24A 2B3LA 2Q96A 2GG8A 1YW9A 3BIPA 1WL6A
chains in the Genus database with same CATH topology
4U71A 2BHAA 3FM3A 1WN1A 2P9AA 4S2TP 3IU9A 5JFRA 3BITA 3CB5A 4FLLA 4RZZA 4B28A 1KQ9A 2BWSA 2BWUA 2EVOA 3D27A 2GGBA 1QXZA 4IKUA 2BHDA 2GU4A 5CDLA 3RORA 1Y1NA 1PV9A 4S01A 4S00A 5FCHA 2V3XA 2Q92A 5E5BA 1YJ3A 2GG9A 1YW7A 3RVAA 1QXWA 1KQ0A 3L24A 1YVMA 4FLKA 1KP0A 2P99A 2P98A 4U6JA 2B3KA 2V3YA 4RZYA 4IKSA 4IU6A 1R58A 1C22A 1CHMA 2GG3A 3Q6DA 5CNXA 3S6BA 2BB7A 4FLJA 1XNZA 2BH3A 4R60A 5FCFA 4U73A 3TB5A 4IDYA 4IKRA 2GZ5A 1N51A 3PKDA 2GU6A 5CIKA 4FKCA 4FO7A 2MATA 3MX6A 2Q95A 1WY2A 2EA2A 2GG2A 4MATA 1BOAA 4A6VA 4EGEA 1YW8A 2ADUA 1JAWA 5CLSA 2BHCA 5CDVA 5CE6A 2GA2A 2GU5A 1QXYA 2GG5A 3BIQA 1W7VA 4Z7MA 4S2RP 1O0XA 4U69A 1XGSA 4FO8A 2NQ6A 1XGNA 2Q93A 4U6WA 4U75A 1B59A 1QZYA 2Q94A 1WLRA 4U76A 1WBQA 4ZWUA 2Q8KA 2ZSGA 4FUKA 5D6FA 2BHBA 1WKMA 2GU7A 4ZNGA 2GTXA 4HXXA 5CDEA 4U6CA 1WL9A 4FLIA 2BWXA 5JHUA 4IPAA 2GG0A 2BN7A 2NQ7A 2BWYA 3PKAA 1B6AA 2EVCA 4PV4A 3CTZA 3IG4A 4ZWOA 4U1BA 1C23A 3MATA 2EVMA 4U6EA 3PKEA 4KM3A 1R5HA 3PKCA 4IKTA 2OKNA 4RGZ1 2BWVA 4ZWPA 4IF7A 2BWTA 5D6EA 3FMRA 2DFIA 1M35A 2IW2A 4QR8A 2HOWA 3CB6A 1MATA 1A16A 1XGOA 2V6CA 3FMQA 4PNCA 5JI6A 1XGMA 2G6PA 4U6ZA 2B3HA 1R5GA 1W2MA 2GG7A 2GGCA 3MR1A 4JUQA 4U70A 1C21A 3IU8A 2BWWA 1BN5A 3TAVA 2OAZA 3PKBA 4IECA 2V3ZA 3IU7A 1C27A 3L7GA 4A6WA 2EA4A 4OOKA 1C24A 2B3LA 2Q96A 2GG8A 1YW9A 3BIPA 1WL6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4U71 A;  2BHA A;  3FM3 A;  1WN1 A;  2P9A A;  4S2T P;  3IU9 A;  5JFR A;  3BIT A;  3CB5 A;  4FLL A;  4RZZ A;  4B28 A;  1KQ9 A;  2BWS A;  2BWU A;  2EVO A;  3D27 A;  2GGB A;  1QXZ A;  4IKU A;  2BHD A;  2GU4 A;  5CDL A;  3ROR A;  1Y1N A;  1PV9 A;  4S01 A;  4S00 A;  5FCH A;  2V3X A;  2Q92 A;  5E5B A;  1YJ3 A;  2GG9 A;  1YW7 A;  3RVA A;  1QXW A;  1KQ0 A;  3L24 A;  1YVM A;  4FLK A;  1KP0 A;  2P99 A;  2P98 A;  4U6J A;  2B3K A;  2V3Y A;  4RZY A;  4IKS A;  4IU6 A;  1R58 A;  1C22 A;  1CHM A;  2GG3 A;  3Q6D A;  5CNX A;  3S6B A;  2BB7 A;  4FLJ A;  1XNZ A;  2BH3 A;  4R60 A;  5FCF A;  4U73 A;  3TB5 A;  4IDY A;  4IKR A;  2GZ5 A;  1N51 A;  3PKD A;  2GU6 A;  5CIK A;  4FKC A;  4FO7 A;  2MAT A;  3MX6 A;  2Q95 A;  1WY2 A;  2EA2 A;  2GG2 A;  4MAT A;  1BOA A;  4A6V A;  4EGE A;  1YW8 A;  2ADU A;  1JAW A;  5CLS A;  2BHC A;  5CDV A;  5CE6 A;  2GA2 A;  2GU5 A;  1QXY A;  2GG5 A;  3BIQ A;  1W7V A;  4Z7M A;  4S2R P;  1O0X A;  4U69 A;  1XGS A;  4FO8 A;  2NQ6 A;  1XGN A;  2Q93 A;  4U6W A;  4U75 A;  1B59 A;  1QZY A;  2Q94 A;  1WLR A;  4U76 A;  1WBQ A;  4ZWU A;  2Q8K A;  2ZSG A;  4FUK A;  5D6F A;  2BHB A;  1WKM A;  2GU7 A;  4ZNG A;  2GTX A;  4HXX A;  5CDE A;  4U6C A;  1WL9 A;  4FLI A;  2BWX A;  5JHU A;  4IPA A;  2GG0 A;  2BN7 A;  2NQ7 A;  2BWY A;  3PKA A;  1B6A A;  2EVC A;  4PV4 A;  3CTZ A;  3IG4 A;  4ZWO A;  4U1B A;  1C23 A;  3MAT A;  2EVM A;  4U6E A;  3PKE A;  4KM3 A;  1R5H A;  3PKC A;  4IKT A;  2OKN A;  4RGZ 1;  2BWV A;  4ZWP A;  4IF7 A;  2BWT A;  5D6E A;  3FMR A;  2DFI A;  1M35 A;  2IW2 A;  4QR8 A;  2HOW A;  3CB6 A;  1MAT A;  1A16 A;  1XGO A;  2V6C A;  3FMQ A;  4PNC A;  5JI6 A;  1XGM A;  2G6P A;  4U6Z A;  2B3H A;  1R5G A;  1W2M A;  2GG7 A;  2GGC A;  3MR1 A;  4JUQ A;  4U70 A;  1C21 A;  3IU8 A;  2BWW A;  1BN5 A;  3TAV A;  2OAZ A;  3PKB A;  4IEC A;  2V3Z A;  3IU7 A;  1C27 A;  3L7G A;  4A6W A;  2EA4 A;  4OOK A;  1C24 A;  2B3L A;  2Q96 A;  2GG8 A;  1YW9 A;  3BIP A;  1WL6 A; 
#chains in the Genus database with same CATH topology
 4U71 A;  2BHA A;  3FM3 A;  1WN1 A;  2P9A A;  4S2T P;  3IU9 A;  5JFR A;  3BIT A;  3CB5 A;  4FLL A;  4RZZ A;  4B28 A;  1KQ9 A;  2BWS A;  2BWU A;  2EVO A;  3D27 A;  2GGB A;  1QXZ A;  4IKU A;  2BHD A;  2GU4 A;  5CDL A;  3ROR A;  1Y1N A;  1PV9 A;  4S01 A;  4S00 A;  5FCH A;  2V3X A;  2Q92 A;  5E5B A;  1YJ3 A;  2GG9 A;  1YW7 A;  3RVA A;  1QXW A;  1KQ0 A;  3L24 A;  1YVM A;  4FLK A;  1KP0 A;  2P99 A;  2P98 A;  4U6J A;  2B3K A;  2V3Y A;  4RZY A;  4IKS A;  4IU6 A;  1R58 A;  1C22 A;  1CHM A;  2GG3 A;  3Q6D A;  5CNX A;  3S6B A;  2BB7 A;  4FLJ A;  1XNZ A;  2BH3 A;  4R60 A;  5FCF A;  4U73 A;  3TB5 A;  4IDY A;  4IKR A;  2GZ5 A;  1N51 A;  3PKD A;  2GU6 A;  5CIK A;  4FKC A;  4FO7 A;  2MAT A;  3MX6 A;  2Q95 A;  1WY2 A;  2EA2 A;  2GG2 A;  4MAT A;  1BOA A;  4A6V A;  4EGE A;  1YW8 A;  2ADU A;  1JAW A;  5CLS A;  2BHC A;  5CDV A;  5CE6 A;  2GA2 A;  2GU5 A;  1QXY A;  2GG5 A;  3BIQ A;  1W7V A;  4Z7M A;  4S2R P;  1O0X A;  4U69 A;  1XGS A;  4FO8 A;  2NQ6 A;  1XGN A;  2Q93 A;  4U6W A;  4U75 A;  1B59 A;  1QZY A;  2Q94 A;  1WLR A;  4U76 A;  1WBQ A;  4ZWU A;  2Q8K A;  2ZSG A;  4FUK A;  5D6F A;  2BHB A;  1WKM A;  2GU7 A;  4ZNG A;  2GTX A;  4HXX A;  5CDE A;  4U6C A;  1WL9 A;  4FLI A;  2BWX A;  5JHU A;  4IPA A;  2GG0 A;  2BN7 A;  2NQ7 A;  2BWY A;  3PKA A;  1B6A A;  2EVC A;  4PV4 A;  3CTZ A;  3IG4 A;  4ZWO A;  4U1B A;  1C23 A;  3MAT A;  2EVM A;  4U6E A;  3PKE A;  4KM3 A;  1R5H A;  3PKC A;  4IKT A;  2OKN A;  4RGZ 1;  2BWV A;  4ZWP A;  4IF7 A;  2BWT A;  5D6E A;  3FMR A;  2DFI A;  1M35 A;  2IW2 A;  4QR8 A;  2HOW A;  3CB6 A;  1MAT A;  1A16 A;  1XGO A;  2V6C A;  3FMQ A;  4PNC A;  5JI6 A;  1XGM A;  2G6P A;  4U6Z A;  2B3H A;  1R5G A;  1W2M A;  2GG7 A;  2GGC A;  3MR1 A;  4JUQ A;  4U70 A;  1C21 A;  3IU8 A;  2BWW A;  1BN5 A;  3TAV A;  2OAZ A;  3PKB A;  4IEC A;  2V3Z A;  3IU7 A;  1C27 A;  3L7G A;  4A6W A;  2EA4 A;  4OOK A;  1C24 A;  2B3L A;  2Q96 A;  2GG8 A;  1YW9 A;  3BIP A;  1WL6 A; 
#chains in the Genus database with same CATH homology
 4U71 A;  2BHA A;  3FM3 A;  1WN1 A;  2P9A A;  4S2T P;  3IU9 A;  5JFR A;  3BIT A;  3CB5 A;  4FLL A;  4RZZ A;  4B28 A;  1KQ9 A;  2BWS A;  2BWU A;  2EVO A;  3D27 A;  2GGB A;  1QXZ A;  4IKU A;  2BHD A;  2GU4 A;  5CDL A;  3ROR A;  1Y1N A;  1PV9 A;  4S01 A;  4S00 A;  5FCH A;  2V3X A;  2Q92 A;  5E5B A;  1YJ3 A;  2GG9 A;  1YW7 A;  3RVA A;  1QXW A;  1KQ0 A;  3L24 A;  1YVM A;  4FLK A;  1KP0 A;  2P99 A;  2P98 A;  4U6J A;  2B3K A;  2V3Y A;  4RZY A;  4IKS A;  4IU6 A;  1R58 A;  1C22 A;  1CHM A;  2GG3 A;  3Q6D A;  5CNX A;  3S6B A;  2BB7 A;  4FLJ A;  1XNZ A;  2BH3 A;  4R60 A;  5FCF A;  4U73 A;  3TB5 A;  4IDY A;  4IKR A;  2GZ5 A;  1N51 A;  3PKD A;  2GU6 A;  5CIK A;  4FKC A;  4FO7 A;  2MAT A;  3MX6 A;  2Q95 A;  1WY2 A;  2EA2 A;  2GG2 A;  4MAT A;  1BOA A;  4A6V A;  4EGE A;  1YW8 A;  2ADU A;  1JAW A;  5CLS A;  2BHC A;  5CDV A;  5CE6 A;  2GA2 A;  2GU5 A;  1QXY A;  2GG5 A;  3BIQ A;  1W7V A;  4Z7M A;  4S2R P;  1O0X A;  4U69 A;  1XGS A;  4FO8 A;  2NQ6 A;  1XGN A;  2Q93 A;  4U6W A;  4U75 A;  1B59 A;  1QZY A;  2Q94 A;  1WLR A;  4U76 A;  1WBQ A;  4ZWU A;  2Q8K A;  2ZSG A;  4FUK A;  5D6F A;  2BHB A;  1WKM A;  2GU7 A;  4ZNG A;  2GTX A;  4HXX A;  5CDE A;  4U6C A;  1WL9 A;  4FLI A;  2BWX A;  5JHU A;  4IPA A;  2GG0 A;  2BN7 A;  2NQ7 A;  2BWY A;  3PKA A;  1B6A A;  2EVC A;  4PV4 A;  3CTZ A;  3IG4 A;  4ZWO A;  4U1B A;  1C23 A;  3MAT A;  2EVM A;  4U6E A;  3PKE A;  4KM3 A;  1R5H A;  3PKC A;  4IKT A;  2OKN A;  4RGZ 1;  2BWV A;  4ZWP A;  4IF7 A;  2BWT A;  5D6E A;  3FMR A;  2DFI A;  1M35 A;  2IW2 A;  4QR8 A;  2HOW A;  3CB6 A;  1MAT A;  1A16 A;  1XGO A;  2V6C A;  3FMQ A;  4PNC A;  5JI6 A;  1XGM A;  2G6P A;  4U6Z A;  2B3H A;  1R5G A;  1W2M A;  2GG7 A;  2GGC A;  3MR1 A;  4JUQ A;  4U70 A;  1C21 A;  3IU8 A;  2BWW A;  1BN5 A;  3TAV A;  2OAZ A;  3PKB A;  4IEC A;  2V3Z A;  3IU7 A;  1C27 A;  3L7G A;  4A6W A;  2EA4 A;  4OOK A;  1C24 A;  2B3L A;  2Q96 A;  2GG8 A;  1YW9 A;  3BIP A;  1WL6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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