4Q41A

Crystal structure of schistosoma mansoni arginase in complex with l-lysine
Total Genus 125
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
125
sequence length
344
structure length
333
Chain Sequence
KLLYTSANFLGIPTNRGQPKIGTYQGPELIRKSNFFQLVAEDGIQLTDCGDIIPVELNEAEDPQRFGMKWSRSFSLTTLRIAERVEELMKQKSTPLVIVGGDHSMATGTILGHAEAKPDLCVLWIDAHGDINTPLNSASGNMHGMPLSFLVKELQDQIPWLDDFEGIKPCLNASNIAYIGLRDLDAHETHDIRKHGIAYFTMLDVDRMGIEAVIKEALLAVNPRLEKAIHLSFDIDALDPLVAPSTGTAVPGGLTLREGLRICEEVSATGKLSVVELAELNPLLGSQEDVLKTQSSAVHILRACLGHCRSGHLPFKVRNLTDQGIMSRAAHMQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase
publication title Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis.
pubmed doi rcsb
source organism Schistosoma mansoni
total genus 125
structure length 333
sequence length 344
chains with identical sequence B, C, D
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2014-04-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4q41A00
1T4RA 1P8NA 4ITYA 4IXUA 2EF4A 2ZAVA 1HQXA 3M1RA 4Q3RA 5HJ9A 4RHKA 3E9BA 3CEVA 3KV2A 1D3VA 4GSMA 1ZPGA 3E8QA 1P8SA 3MFWA 4FCIA 1T4SA 2PHAA 3SJTA 4Q3QA 1P8QA 5HJAA 4IE1A 4Q3VA 4RHQA 1HQ5A 1P8MA 3TF3A 1T4TA 4I06A 2CEVA 1WVBA 4IE2A 4MYNA 4MXRA 4IU5A 1HQHA 4FCKA 3GMZA 3NIPA 2EIVA 3E8ZA 3NIOA 2AEBA 4DZ4A 4IXVA 4RLAA 1P8OA 3LHLA 4HXQA 4Q41A 1TBHA 4GWDA 3GN0A 4IU4A 3MJLA 4MYFA 4HZEA 3SL1A 3F80A 2RLAA 2A0MA 1PQ3A 4Q40A 1GQ6A 4IE3A 4RHIA 1TA1A 1R1OA 4GWCA 1P8RA 4GSZA 1GQ7A 1WOGA 2EF5A 4Q3PA 3NIQA 2PHOA 1P8PA 5CEVA 4IU0A 1ZPEA 1HQFA 1CEVA 3TH7A 3LP7A 3SL0A 4RHJA 3LP4A 3RLAA 1TBLA 4Q3TA 4GSVA 4CEVA 1TBJA 1T5FA 3SKKA 4RHLA 3THHA 4HWWA 4Q3RC 3E6VA 3THJA 1RLAA 4IU1A 2PLLA 4G3HA 1HQGA 3THEA 3DJ8A 1WOIA 3E6KA 4Q3SA 1WOHA 1XFKA 4MYLA 3PZLA 4Q42A 5RLAA 3MMRA 3MFVA 1T5GA 1WVAA 4RHMA 4MYKA 4Q3UA 1T4PA
chains in the Genus database with same CATH superfamily
1T4RA 1P8NA 4ITYA 4IXUA 2EF4A 4RN1A 3SFHA 2ZAVA 5THUA 1HQXA 5G0XA 3M1RA 4Q3RA 3MENA 5HJ9A 5EEMA 4BZ5A 4RHKA 3E9BA 3CEVA 5G1AA 3KV2A 1D3VA 5DC5A 3MZ6A 4GSMA 1ZPGA 3E8QA 1P8SA 3SFFA 3MFWA 4FCIA 1T4SA 3C0YA 4QA6A 2PHAA 3SJTA 5G3WA 4Q3QA 5G0HA 1C3SA 5THSA 1P8QA 4QA4A 4BZ7A 5A2SA 5HJAA 4QA1A 4IE1A 4Q3VA 5EFHA 4RHQA 1HQ5A 4LY1A 5IX0A 1P8MA 3TF3A 1T4TA 4ZUQA 5G13A 3C10A 4I06A 2CEVA 1WVBA 4IE2A 4MYNA 4MXRA 4IU5A 1HQHA 2V5WA 5D1BA 4FCKA 4ZUOA 4QA2A 3GMZA 1VKGA 3NIPA 2EIVA 1T67A 2VQJA 5BWZA 3E8ZA 3EZPA 1C3RA 3NIOA 3ZNSA 2AEBA 4DZ4A 4IXVA 4RLAA 5DC7A 1P8OA 3LHLA 5G1BA 4HXQA 3RQDA 4Q41A 1TBHA 4GWDA 3GN0A 2GH6A 4IU4A 3MJLA 5EFKB 5EEFA 1ZZ3A 4CBYA 4ZUMA 3F07A 3F06A 4MYFA 5EF8A 4HZEA 5EFJD 3SL1A 3F80A 5EFBD 3Q9CA 2RLAA 2A0MA 1PQ3A 2VQVA 3MAXA 1GQ6A 4Q40A 5D1CA 4IE3A 5EENA 3F0RA 3Q9EA 4RHIA 4CBTA 2V5XA 1TA1A 1R1OA 2VQWG 4GWCA 3MZ7A 1P8RA 5JI5A 3EW8A 3EZTA 4GSZA 1GQ7A 1WOGA 2VQMA 2EF5A 5G1CA 5G17A 4A69A 4Q3PA 5DC6A 3NIQA 2PHOA 1P8PA 4RN0A 5THTA 5D1DA 5FUEA 4QA5A 5CEVA 4IU0A 1ZPEA 5G0IA 1HQFA 2VQQA 1CEVA 3TH7A 3LP7A 3Q9BA 5DC8A 5G0GA 3MZ4A 3SL0A 4CQFA 2VQOA 4RHJA 5G0JA 3LP4A 3RLAA 5IWGA 1TBLA 5EFGA 4Q3TA 4ZUNA 1T4PA 4GSVA 4BKXB 5LI3A 4BZ9A 4RN2A 5G10A 4CEVA 1TBJA 1T5FA 3SKKA 5EEKA 4RHLA 5EF7A 3MZ3A 3THHA 4HWWA 4Q3RC 2VCGA 1ZZ1A 3E6VA 1RLAA 1ZZ0A 4QA7A 4IU1A 2PLLA 4G3HA 3THJA 1HQGA 3THEA 3EWFA 3DJ8A 1WOIA 3E6KA 4Q3SA 5G12A 1WOHA 3ZNRA 5EEIA 1T64A 1XFKA 5G11A 3Q9FA 5EFNA 1C3PA 4ZURA 4MYLA 3PZLA 4BZ8A 4Q42A 5RLAA 4QA0A 5THVA 3MMRA 1T69A 5FCWA 3MFVA 1T5GA 4QA3A 1W22A 1WVAA 4RHMA 4MYKA 4Q3UA 4LXZA 4BZ6A 5ICNB 5G0YA 3C0ZA 4ZUPA
chains in the Genus database with same CATH topology
1T4RA 1P8NA 4ITYA 4IXUA 2EF4A 2ZAVA 1HQXA 3M1RA 4Q3RA 5HJ9A 4RHKA 3E9BA 3CEVA 3KV2A 1D3VA 4GSMA 1ZPGA 3E8QA 1P8SA 3MFWA 4FCIA 1T4SA 2PHAA 3SJTA 4Q3QA 1P8QA 5HJAA 4IE1A 4Q3VA 4RHQA 1HQ5A 1P8MA 3TF3A 1T4TA 4I06A 2CEVA 1WVBA 4IE2A 4MYNA 4MXRA 4IU5A 1HQHA 4FCKA 3GMZA 3NIPA 2EIVA 3E8ZA 3NIOA 2AEBA 4DZ4A 4IXVA 4RLAA 1P8OA 3LHLA 4HXQA 4Q41A 1TBHA 4GWDA 3GN0A 4IU4A 3MJLA 4MYFA 4HZEA 3SL1A 3F80A 2RLAA 2A0MA 1PQ3A 4Q40A 1GQ6A 4IE3A 4RHIA 1TA1A 1R1OA 4GWCA 1P8RA 4GSZA 1GQ7A 1WOGA 2EF5A 4Q3PA 3NIQA 2PHOA 1P8PA 5CEVA 4IU0A 1ZPEA 1HQFA 1CEVA 3TH7A 3LP7A 3SL0A 4RHJA 3LP4A 3RLAA 1TBLA 4Q3TA 4GSVA 4CEVA 1TBJA 1T5FA 3SKKA 4RHLA 3THHA 4HWWA 4Q3RC 3E6VA 3THJA 1RLAA 4IU1A 2PLLA 4G3HA 1HQGA 3THEA 3DJ8A 1WOIA 3E6KA 4Q3SA 1WOHA 1XFKA 4MYLA 3PZLA 4Q42A 5RLAA 3MMRA 3MFVA 1T5GA 1WVAA 4RHMA 4MYKA 4Q3UA 1T4PA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T4R A;  1P8N A;  4ITY A;  4IXU A;  2EF4 A;  2ZAV A;  1HQX A;  3M1R A;  4Q3R A;  5HJ9 A;  4RHK A;  3E9B A;  3CEV A;  3KV2 A;  1D3V A;  4GSM A;  1ZPG A;  3E8Q A;  1P8S A;  3MFW A;  4FCI A;  1T4S A;  2PHA A;  3SJT A;  4Q3Q A;  1P8Q A;  5HJA A;  4IE1 A;  4Q3V A;  4RHQ A;  1HQ5 A;  1P8M A;  3TF3 A;  1T4T A;  4I06 A;  2CEV A;  1WVB A;  4IE2 A;  4MYN A;  4MXR A;  4IU5 A;  1HQH A;  4FCK A;  3GMZ A;  3NIP A;  2EIV A;  3E8Z A;  3NIO A;  2AEB A;  4DZ4 A;  4IXV A;  4RLA A;  1P8O A;  3LHL A;  4HXQ A;  4Q41 A;  1TBH A;  4GWD A;  3GN0 A;  4IU4 A;  3MJL A;  4MYF A;  4HZE A;  3SL1 A;  3F80 A;  2RLA A;  2A0M A;  1PQ3 A;  4Q40 A;  1GQ6 A;  4IE3 A;  4RHI A;  1TA1 A;  1R1O A;  4GWC A;  1P8R A;  4GSZ A;  1GQ7 A;  1WOG A;  2EF5 A;  4Q3P A;  3NIQ A;  2PHO A;  1P8P A;  5CEV A;  4IU0 A;  1ZPE A;  1HQF A;  1CEV A;  3TH7 A;  3LP7 A;  3SL0 A;  4RHJ A;  3LP4 A;  3RLA A;  1TBL A;  4Q3T A;  4GSV A;  4CEV A;  1TBJ A;  1T5F A;  3SKK A;  4RHL A;  3THH A;  4HWW A;  4Q3R C;  3E6V A;  3THJ A;  1RLA A;  4IU1 A;  2PLL A;  4G3H A;  1HQG A;  3THE A;  3DJ8 A;  1WOI A;  3E6K A;  4Q3S A;  1WOH A;  1XFK A;  4MYL A;  3PZL A;  4Q42 A;  5RLA A;  3MMR A;  3MFV A;  1T5G A;  1WVA A;  4RHM A;  4MYK A;  4Q3U A;  1T4P A; 
#chains in the Genus database with same CATH topology
 1T4R A;  1P8N A;  4ITY A;  4IXU A;  2EF4 A;  4RN1 A;  3SFH A;  2ZAV A;  5THU A;  1HQX A;  5G0X A;  3M1R A;  4Q3R A;  3MEN A;  5HJ9 A;  5EEM A;  4BZ5 A;  4RHK A;  3E9B A;  3CEV A;  5G1A A;  3KV2 A;  1D3V A;  5DC5 A;  3MZ6 A;  4GSM A;  1ZPG A;  3E8Q A;  1P8S A;  3SFF A;  3MFW A;  4FCI A;  1T4S A;  3C0Y A;  4QA6 A;  2PHA A;  3SJT A;  5G3W A;  4Q3Q A;  5G0H A;  1C3S A;  5THS A;  1P8Q A;  4QA4 A;  4BZ7 A;  5A2S A;  5HJA A;  4QA1 A;  4IE1 A;  4Q3V A;  5EFH A;  4RHQ A;  1HQ5 A;  4LY1 A;  5IX0 A;  1P8M A;  3TF3 A;  1T4T A;  4ZUQ A;  5G13 A;  3C10 A;  4I06 A;  2CEV A;  1WVB A;  4IE2 A;  4MYN A;  4MXR A;  4IU5 A;  1HQH A;  2V5W A;  5D1B A;  4FCK A;  4ZUO A;  4QA2 A;  3GMZ A;  1VKG A;  3NIP A;  2EIV A;  1T67 A;  2VQJ A;  5BWZ A;  3E8Z A;  3EZP A;  1C3R A;  3NIO A;  3ZNS A;  2AEB A;  4DZ4 A;  4IXV A;  4RLA A;  5DC7 A;  1P8O A;  3LHL A;  5G1B A;  4HXQ A;  3RQD A;  4Q41 A;  1TBH A;  4GWD A;  3GN0 A;  2GH6 A;  4IU4 A;  3MJL A;  5EFK B;  5EEF A;  1ZZ3 A;  4CBY A;  4ZUM A;  3F07 A;  3F06 A;  4MYF A;  5EF8 A;  4HZE A;  5EFJ D;  3SL1 A;  3F80 A;  5EFB D;  3Q9C A;  2RLA A;  2A0M A;  1PQ3 A;  2VQV A;  3MAX A;  1GQ6 A;  4Q40 A;  5D1C A;  4IE3 A;  5EEN A;  3F0R A;  3Q9E A;  4RHI A;  4CBT A;  2V5X A;  1TA1 A;  1R1O A;  2VQW G;  4GWC A;  3MZ7 A;  1P8R A;  5JI5 A;  3EW8 A;  3EZT A;  4GSZ A;  1GQ7 A;  1WOG A;  2VQM A;  2EF5 A;  5G1C A;  5G17 A;  4A69 A;  4Q3P A;  5DC6 A;  3NIQ A;  2PHO A;  1P8P A;  4RN0 A;  5THT A;  5D1D A;  5FUE A;  4QA5 A;  5CEV A;  4IU0 A;  1ZPE A;  5G0I A;  1HQF A;  2VQQ A;  1CEV A;  3TH7 A;  3LP7 A;  3Q9B A;  5DC8 A;  5G0G A;  3MZ4 A;  3SL0 A;  4CQF A;  2VQO A;  4RHJ A;  5G0J A;  3LP4 A;  3RLA A;  5IWG A;  1TBL A;  5EFG A;  4Q3T A;  4ZUN A;  1T4P A;  4GSV A;  4BKX B;  5LI3 A;  4BZ9 A;  4RN2 A;  5G10 A;  4CEV A;  1TBJ A;  1T5F A;  3SKK A;  5EEK A;  4RHL A;  5EF7 A;  3MZ3 A;  3THH A;  4HWW A;  4Q3R C;  2VCG A;  1ZZ1 A;  3E6V A;  1RLA A;  1ZZ0 A;  4QA7 A;  4IU1 A;  2PLL A;  4G3H A;  3THJ A;  1HQG A;  3THE A;  3EWF A;  3DJ8 A;  1WOI A;  3E6K A;  4Q3S A;  5G12 A;  1WOH A;  3ZNR A;  5EEI A;  1T64 A;  1XFK A;  5G11 A;  3Q9F A;  5EFN A;  1C3P A;  4ZUR A;  4MYL A;  3PZL A;  4BZ8 A;  4Q42 A;  5RLA A;  4QA0 A;  5THV A;  3MMR A;  1T69 A;  5FCW A;  3MFV A;  1T5G A;  4QA3 A;  1W22 A;  1WVA A;  4RHM A;  4MYK A;  4Q3U A;  4LXZ A;  4BZ6 A;  5ICN B;  5G0Y A;  3C0Z A;  4ZUP A; 
#chains in the Genus database with same CATH homology
 1T4R A;  1P8N A;  4ITY A;  4IXU A;  2EF4 A;  2ZAV A;  1HQX A;  3M1R A;  4Q3R A;  5HJ9 A;  4RHK A;  3E9B A;  3CEV A;  3KV2 A;  1D3V A;  4GSM A;  1ZPG A;  3E8Q A;  1P8S A;  3MFW A;  4FCI A;  1T4S A;  2PHA A;  3SJT A;  4Q3Q A;  1P8Q A;  5HJA A;  4IE1 A;  4Q3V A;  4RHQ A;  1HQ5 A;  1P8M A;  3TF3 A;  1T4T A;  4I06 A;  2CEV A;  1WVB A;  4IE2 A;  4MYN A;  4MXR A;  4IU5 A;  1HQH A;  4FCK A;  3GMZ A;  3NIP A;  2EIV A;  3E8Z A;  3NIO A;  2AEB A;  4DZ4 A;  4IXV A;  4RLA A;  1P8O A;  3LHL A;  4HXQ A;  4Q41 A;  1TBH A;  4GWD A;  3GN0 A;  4IU4 A;  3MJL A;  4MYF A;  4HZE A;  3SL1 A;  3F80 A;  2RLA A;  2A0M A;  1PQ3 A;  4Q40 A;  1GQ6 A;  4IE3 A;  4RHI A;  1TA1 A;  1R1O A;  4GWC A;  1P8R A;  4GSZ A;  1GQ7 A;  1WOG A;  2EF5 A;  4Q3P A;  3NIQ A;  2PHO A;  1P8P A;  5CEV A;  4IU0 A;  1ZPE A;  1HQF A;  1CEV A;  3TH7 A;  3LP7 A;  3SL0 A;  4RHJ A;  3LP4 A;  3RLA A;  1TBL A;  4Q3T A;  4GSV A;  4CEV A;  1TBJ A;  1T5F A;  3SKK A;  4RHL A;  3THH A;  4HWW A;  4Q3R C;  3E6V A;  3THJ A;  1RLA A;  4IU1 A;  2PLL A;  4G3H A;  1HQG A;  3THE A;  3DJ8 A;  1WOI A;  3E6K A;  4Q3S A;  1WOH A;  1XFK A;  4MYL A;  3PZL A;  4Q42 A;  5RLA A;  3MMR A;  3MFV A;  1T5G A;  1WVA A;  4RHM A;  4MYK A;  4Q3U A;  1T4P A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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