4QYQA

Crystal structure of the complex of goat lactoperoxidase with an antithyroid agent propylthiouracil at 2.5 a resolution
Total Genus 176
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
176
sequence length
595
structure length
595
Chain Sequence
SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Lactoperoxidase
publication title Mode of binding of the antithyroid drug propylthiouracil to mammalian haem peroxidases
pubmed doi rcsb
total genus 176
structure length 595
sequence length 595
chains with identical sequence B, C, D
ec nomenclature ec 1.11.1.7: Peroxidase.
pdb deposition date 2014-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03098 An_peroxidase Animal haem peroxidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 4qyqA00
4KVKA 4M10A 4COXA 4OEKA 4RS0A 1MYPC 3ERIA 3ZS1C 3ZS0C 5GH0A 2AYLA 2OYUP 3TGYA 3GCLA 3R55A 5GLSA 1HT8A 1PTHA 1Q4GA 4NT3A 4O1ZA 5FDQA 1EQHA 2GJMA 3UBAA 4QJQA 2OJVA 3I6NA 4E1GA 3HS7A 4KSZA 5F19A 3TZIA 5IKQA 5KIRA 3QL6A 4OTYA 4HHRA 4DL1C 1D7WC 2R5LA 3OLUA 3BXIA 3QMOA 1DDXA 1EBVA 3GC1A 3V6QA 3KK6A 5COXA 3QH0A 5IKVA 1CVUA 3MDLA 1HT5A 3NYHA 4M11A 4RUTA 3GCKA 1CQEA 3ERHA 3NTGA 5B72A 1MHLC 2EHAA 3R5OA 1IGXA 3R5QA 3LN0A 3NT1A 3SXVA 3RR3A 3NIUA 4OTJA 3N8YB 4RRXA 3MQEA 2QQTA 1DIYA 2PUMA 2O86A 6COXA 4QYQA 1D5LC 2IKCA 4N7AA 2QRBA 3QF1A 2Z5ZA 3NAKA 5IKRA 4IG5A 1PXXA 3OLTA 3HS6A 3KRKA 3N8YA 5HPWA 1PRHA 4MSFA 4Y55A 5FIWC 4GN6A 5JVYA 3N8FA 3NTBA 3FNLA 1PGEA 5F1AA 3KRQA 3F9PC 3Q9KA 3OGWA 3PY4A 2NQXA 5IKTA 1CX2A 2PT3A 5FF1A 1IGZA 3GCJA 3Q7DA 3RKEA 1EQGA 4PH9A 5JVZA 3R4XA 3N8XA 3N8VA 4RRYA 3N8WB 1U67A 4KVLA 2QPKA 3LN1A 4RRWA 5JW1A 4KVJA 3PGHA 3N8ZA 1DNWC 3S4FA 1FE2A 2EFBA 4FM5A 4HHSA 4NJBA 2IPSA 4RRZA 3N8WA 4C1MC 1D2VC 2OYEP 4GM7A 2E9EA 1CXPC 4Z0LA 1DNUC 3FAQA 3HS5A 4LJJA 4PNXA
chains in the Genus database with same CATH superfamily
4KVKA 4M10A 4COXA 4OEKA 4RS0A 1MYPC 3ERIA 3ZS1C 3ZS0C 5GH0A 2AYLA 2OYUP 3TGYA 3GCLA 3R55A 5GLSA 1HT8A 1PTHA 1Q4GA 4NT3A 4O1ZA 5FDQA 1EQHA 2GJMA 3UBAA 4QJQA 2OJVA 3I6NA 4E1GA 3HS7A 4KSZA 5F19A 3TZIA 5IKQA 5KIRA 3QL6A 4OTYA 4HHRA 4DL1C 1D7WC 2R5LA 3OLUA 3BXIA 3QMOA 1DDXA 1EBVA 3GC1A 3V6QA 3KK6A 5COXA 3QH0A 5IKVA 1CVUA 3MDLA 1HT5A 3NYHA 4M11A 4RUTA 3GCKA 1CQEA 3ERHA 3NTGA 5B72A 1MHLC 2EHAA 3R5OA 1IGXA 3R5QA 3LN0A 3NT1A 3SXVA 3RR3A 3NIUA 4OTJA 3N8YB 4RRXA 3MQEA 2QQTA 1DIYA 2PUMA 2O86A 6COXA 4QYQA 1D5LC 2IKCA 4N7AA 2QRBA 3QF1A 2Z5ZA 3NAKA 5IKRA 4IG5A 1PXXA 3OLTA 3HS6A 3KRKA 3N8YA 5HPWA 1PRHA 4MSFA 4Y55A 5FIWC 4GN6A 5JVYA 3N8FA 3NTBA 3FNLA 1PGEA 5F1AA 3KRQA 3F9PC 3Q9KA 3OGWA 3PY4A 2NQXA 5IKTA 1CX2A 2PT3A 5FF1A 1IGZA 3GCJA 3Q7DA 3RKEA 1EQGA 4PH9A 5JVZA 3R4XA 3N8XA 3N8VA 4RRYA 3N8WB 1U67A 4KVLA 2QPKA 3LN1A 4RRWA 5JW1A 4KVJA 3PGHA 3N8ZA 1DNWC 3S4FA 1FE2A 2EFBA 4FM5A 4HHSA 4NJBA 2IPSA 4RRZA 3N8WA 4C1MC 1D2VC 2OYEP 4GM7A 2E9EA 1CXPC 4Z0LA 1DNUC 3FAQA 3HS5A 4LJJA 4PNXA
chains in the Genus database with same CATH topology
4KVKA 4M10A 4COXA 4OEKA 4RS0A 1MYPC 3ERIA 3ZS1C 3ZS0C 5GH0A 2AYLA 2OYUP 3TGYA 3GCLA 3R55A 5GLSA 1HT8A 1PTHA 1Q4GA 4NT3A 4O1ZA 5FDQA 1EQHA 2GJMA 3UBAA 4QJQA 2OJVA 3I6NA 4E1GA 3HS7A 4KSZA 5F19A 3TZIA 5IKQA 5KIRA 3QL6A 4OTYA 4HHRA 4DL1C 1D7WC 2R5LA 3OLUA 3BXIA 3QMOA 1DDXA 1EBVA 3GC1A 3V6QA 3KK6A 5COXA 3QH0A 5IKVA 1CVUA 3MDLA 1HT5A 3NYHA 4M11A 4RUTA 3GCKA 1CQEA 3ERHA 3NTGA 5B72A 1MHLC 2EHAA 3R5OA 1IGXA 3R5QA 3LN0A 3NT1A 3SXVA 3RR3A 3NIUA 4OTJA 3N8YB 4RRXA 3MQEA 2QQTA 1DIYA 2PUMA 2O86A 6COXA 4QYQA 1D5LC 2IKCA 4N7AA 2QRBA 3QF1A 2Z5ZA 3NAKA 5IKRA 4IG5A 1PXXA 3OLTA 3HS6A 3KRKA 3N8YA 5HPWA 1PRHA 4MSFA 4Y55A 5FIWC 4GN6A 5JVYA 3N8FA 3NTBA 3FNLA 1PGEA 5F1AA 3KRQA 3F9PC 3Q9KA 3OGWA 3PY4A 2NQXA 5IKTA 1CX2A 2PT3A 5FF1A 1IGZA 3GCJA 3Q7DA 3RKEA 1EQGA 4PH9A 5JVZA 3R4XA 3N8XA 3N8VA 4RRYA 3N8WB 1U67A 4KVLA 2QPKA 3LN1A 4RRWA 5JW1A 4KVJA 3PGHA 3N8ZA 1DNWC 3S4FA 1FE2A 2EFBA 4FM5A 4HHSA 4NJBA 2IPSA 4RRZA 3N8WA 4C1MC 1D2VC 2OYEP 4GM7A 2E9EA 1CXPC 4Z0LA 1DNUC 3FAQA 3HS5A 4LJJA 4PNXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KVK A;  4M10 A;  4COX A;  4OEK A;  4RS0 A;  1MYP C;  3ERI A;  3ZS1 C;  3ZS0 C;  5GH0 A;  2AYL A;  2OYU P;  3TGY A;  3GCL A;  3R55 A;  5GLS A;  1HT8 A;  1PTH A;  1Q4G A;  4NT3 A;  4O1Z A;  5FDQ A;  1EQH A;  2GJM A;  3UBA A;  4QJQ A;  2OJV A;  3I6N A;  4E1G A;  3HS7 A;  4KSZ A;  5F19 A;  3TZI A;  5IKQ A;  5KIR A;  3QL6 A;  4OTY A;  4HHR A;  4DL1 C;  1D7W C;  2R5L A;  3OLU A;  3BXI A;  3QMO A;  1DDX A;  1EBV A;  3GC1 A;  3V6Q A;  3KK6 A;  5COX A;  3QH0 A;  5IKV A;  1CVU A;  3MDL A;  1HT5 A;  3NYH A;  4M11 A;  4RUT A;  3GCK A;  1CQE A;  3ERH A;  3NTG A;  5B72 A;  1MHL C;  2EHA A;  3R5O A;  1IGX A;  3R5Q A;  3LN0 A;  3NT1 A;  3SXV A;  3RR3 A;  3NIU A;  4OTJ A;  3N8Y B;  4RRX A;  3MQE A;  2QQT A;  1DIY A;  2PUM A;  2O86 A;  6COX A;  4QYQ A;  1D5L C;  2IKC A;  4N7A A;  2QRB A;  3QF1 A;  2Z5Z A;  3NAK A;  5IKR A;  4IG5 A;  1PXX A;  3OLT A;  3HS6 A;  3KRK A;  3N8Y A;  5HPW A;  1PRH A;  4MSF A;  4Y55 A;  5FIW C;  4GN6 A;  5JVY A;  3N8F A;  3NTB A;  3FNL A;  1PGE A;  5F1A A;  3KRQ A;  3F9P C;  3Q9K A;  3OGW A;  3PY4 A;  2NQX A;  5IKT A;  1CX2 A;  2PT3 A;  5FF1 A;  1IGZ A;  3GCJ A;  3Q7D A;  3RKE A;  1EQG A;  4PH9 A;  5JVZ A;  3R4X A;  3N8X A;  3N8V A;  4RRY A;  3N8W B;  1U67 A;  4KVL A;  2QPK A;  3LN1 A;  4RRW A;  5JW1 A;  4KVJ A;  3PGH A;  3N8Z A;  1DNW C;  3S4F A;  1FE2 A;  2EFB A;  4FM5 A;  4HHS A;  4NJB A;  2IPS A;  4RRZ A;  3N8W A;  4C1M C;  1D2V C;  2OYE P;  4GM7 A;  2E9E A;  1CXP C;  4Z0L A;  1DNU C;  3FAQ A;  3HS5 A;  4LJJ A;  4PNX A; 
#chains in the Genus database with same CATH topology
 4KVK A;  4M10 A;  4COX A;  4OEK A;  4RS0 A;  1MYP C;  3ERI A;  3ZS1 C;  3ZS0 C;  5GH0 A;  2AYL A;  2OYU P;  3TGY A;  3GCL A;  3R55 A;  5GLS A;  1HT8 A;  1PTH A;  1Q4G A;  4NT3 A;  4O1Z A;  5FDQ A;  1EQH A;  2GJM A;  3UBA A;  4QJQ A;  2OJV A;  3I6N A;  4E1G A;  3HS7 A;  4KSZ A;  5F19 A;  3TZI A;  5IKQ A;  5KIR A;  3QL6 A;  4OTY A;  4HHR A;  4DL1 C;  1D7W C;  2R5L A;  3OLU A;  3BXI A;  3QMO A;  1DDX A;  1EBV A;  3GC1 A;  3V6Q A;  3KK6 A;  5COX A;  3QH0 A;  5IKV A;  1CVU A;  3MDL A;  1HT5 A;  3NYH A;  4M11 A;  4RUT A;  3GCK A;  1CQE A;  3ERH A;  3NTG A;  5B72 A;  1MHL C;  2EHA A;  3R5O A;  1IGX A;  3R5Q A;  3LN0 A;  3NT1 A;  3SXV A;  3RR3 A;  3NIU A;  4OTJ A;  3N8Y B;  4RRX A;  3MQE A;  2QQT A;  1DIY A;  2PUM A;  2O86 A;  6COX A;  4QYQ A;  1D5L C;  2IKC A;  4N7A A;  2QRB A;  3QF1 A;  2Z5Z A;  3NAK A;  5IKR A;  4IG5 A;  1PXX A;  3OLT A;  3HS6 A;  3KRK A;  3N8Y A;  5HPW A;  1PRH A;  4MSF A;  4Y55 A;  5FIW C;  4GN6 A;  5JVY A;  3N8F A;  3NTB A;  3FNL A;  1PGE A;  5F1A A;  3KRQ A;  3F9P C;  3Q9K A;  3OGW A;  3PY4 A;  2NQX A;  5IKT A;  1CX2 A;  2PT3 A;  5FF1 A;  1IGZ A;  3GCJ A;  3Q7D A;  3RKE A;  1EQG A;  4PH9 A;  5JVZ A;  3R4X A;  3N8X A;  3N8V A;  4RRY A;  3N8W B;  1U67 A;  4KVL A;  2QPK A;  3LN1 A;  4RRW A;  5JW1 A;  4KVJ A;  3PGH A;  3N8Z A;  1DNW C;  3S4F A;  1FE2 A;  2EFB A;  4FM5 A;  4HHS A;  4NJB A;  2IPS A;  4RRZ A;  3N8W A;  4C1M C;  1D2V C;  2OYE P;  4GM7 A;  2E9E A;  1CXP C;  4Z0L A;  1DNU C;  3FAQ A;  3HS5 A;  4LJJ A;  4PNX A; 
#chains in the Genus database with same CATH homology
 4KVK A;  4M10 A;  4COX A;  4OEK A;  4RS0 A;  1MYP C;  3ERI A;  3ZS1 C;  3ZS0 C;  5GH0 A;  2AYL A;  2OYU P;  3TGY A;  3GCL A;  3R55 A;  5GLS A;  1HT8 A;  1PTH A;  1Q4G A;  4NT3 A;  4O1Z A;  5FDQ A;  1EQH A;  2GJM A;  3UBA A;  4QJQ A;  2OJV A;  3I6N A;  4E1G A;  3HS7 A;  4KSZ A;  5F19 A;  3TZI A;  5IKQ A;  5KIR A;  3QL6 A;  4OTY A;  4HHR A;  4DL1 C;  1D7W C;  2R5L A;  3OLU A;  3BXI A;  3QMO A;  1DDX A;  1EBV A;  3GC1 A;  3V6Q A;  3KK6 A;  5COX A;  3QH0 A;  5IKV A;  1CVU A;  3MDL A;  1HT5 A;  3NYH A;  4M11 A;  4RUT A;  3GCK A;  1CQE A;  3ERH A;  3NTG A;  5B72 A;  1MHL C;  2EHA A;  3R5O A;  1IGX A;  3R5Q A;  3LN0 A;  3NT1 A;  3SXV A;  3RR3 A;  3NIU A;  4OTJ A;  3N8Y B;  4RRX A;  3MQE A;  2QQT A;  1DIY A;  2PUM A;  2O86 A;  6COX A;  4QYQ A;  1D5L C;  2IKC A;  4N7A A;  2QRB A;  3QF1 A;  2Z5Z A;  3NAK A;  5IKR A;  4IG5 A;  1PXX A;  3OLT A;  3HS6 A;  3KRK A;  3N8Y A;  5HPW A;  1PRH A;  4MSF A;  4Y55 A;  5FIW C;  4GN6 A;  5JVY A;  3N8F A;  3NTB A;  3FNL A;  1PGE A;  5F1A A;  3KRQ A;  3F9P C;  3Q9K A;  3OGW A;  3PY4 A;  2NQX A;  5IKT A;  1CX2 A;  2PT3 A;  5FF1 A;  1IGZ A;  3GCJ A;  3Q7D A;  3RKE A;  1EQG A;  4PH9 A;  5JVZ A;  3R4X A;  3N8X A;  3N8V A;  4RRY A;  3N8W B;  1U67 A;  4KVL A;  2QPK A;  3LN1 A;  4RRW A;  5JW1 A;  4KVJ A;  3PGH A;  3N8Z A;  1DNW C;  3S4F A;  1FE2 A;  2EFB A;  4FM5 A;  4HHS A;  4NJB A;  2IPS A;  4RRZ A;  3N8W A;  4C1M C;  1D2V C;  2OYE P;  4GM7 A;  2E9E A;  1CXP C;  4Z0L A;  1DNU C;  3FAQ A;  3HS5 A;  4LJJ A;  4PNX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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