4RHLA

Crystal structure of t. brucei arginase-like protein triple mutant s149d/r151h/s226d bound with mn2+
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
304
structure length
304
Chain Sequence
MFSKFLMNVKGVTPRGSDWANRLGPVALFGYGAGMPRRAPLLDFFLQSPRDCDHYAELTIHDKGPIECPPETVMFMPVLNCGQMLDEAAGTETPTSDEWYLGSLEASTELLEKGYVPVSVGGDGSATLSMVEAYKRLFPSDDIVIVHFDAHPSVSDPRSPLRVLLDKGLLKGVVSVGNRQVSSEDRKVRKLHKMFYMDMHAIYSKGLFCIRDIRNDYPVFISIDADVLDPAFAPAVDSPVAGGLSTRDLLHIMNGIRGPKVVGIDVYGYNPDLDVYRKDNVGLTAIALSKIIKEGILKAYSIST
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Unknown function
molecule keywords Arginase
publication title Crystal Structure of an Arginase-like Protein from Trypanosoma brucei That Evolved without a Binuclear Manganese Cluster.
pubmed doi rcsb
source organism Trypanosoma brucei brucei
total genus 95
structure length 304
sequence length 304
chains with identical sequence B
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2014-10-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4rhlA00
3E8ZA 4IE2A 1ZPEA 4Q40A 4HXQA 4G3HA 5CEVA 1TBHA 1T4TA 3MMRA 4IE3A 3F80A 3MFVA 4MXRA 3GN0A 5HJ9A 1T4RA 3E9BA 4RHIA 3SJTA 4ITYA 1P8MA 4Q3RC 4RHLA 1WVAA 3E6VA 1P8NA 4RHQA 4IU4A 1T4SA 1TBJA 1P8QA 1TA1A 1XFKA 3E6KA 3SL0A 5HJAA 4DZ4A 1GQ6A 4Q3VA 3NIPA 2PHOA 1WVBA 3LP7A 4GSVA 3THJA 3E8QA 4RHMA 1CEVA 2CEVA 3LP4A 4GWCA 4Q3RA 3CEVA 4Q3TA 1HQ5A 4Q3UA 1T5GA 3PZLA 4MYKA 2EF4A 4Q3SA 4IXVA 4IE1A 1WOIA 4IXUA 4Q3PA 1P8SA 4IU0A 1T4PA 4FCKA 2EF5A 4Q41A 1D3VA 4IU5A 2EIVA 1P8PA 3MFWA 4RHKA 1HQFA 1RLAA 3SKKA 1TBLA 4MYNA 1P8RA 3KV2A 1P8OA 2RLAA 4CEVA 4RLAA 3RLAA 3NIQA 4RHJA 3LHLA 3NIOA 1WOHA 3DJ8A 4MYFA 4FCIA 4GWDA 2ZAVA 4HWWA 1PQ3A 1HQHA 4GSMA 4MYLA 4GSZA 3SL1A 4HZEA 2PLLA 1HQGA 2PHAA 1R1OA 3THHA 2AEBA 1HQXA 3M1RA 1GQ7A 1T5FA 3TH7A 5RLAA 1ZPGA 4I06A 4Q3QA 3THEA 4Q42A 4IU1A 2A0MA 3TF3A 1WOGA 3MJLA 3GMZA
chains in the Genus database with same CATH superfamily
3E8ZA 4IE2A 3RQDA 1ZPEA 4ZURA 4Q40A 4HXQA 5THTA 4G3HA 5EFBD 1TBHA 5EFHA 1T64A 1T4TA 3MMRA 4IE3A 5G3WA 2GH6A 4CBYA 3F80A 3MFVA 5BWZA 4QA0A 5THUA 1C3PA 4MXRA 4QA1A 5G0JA 3GN0A 5HJ9A 1T4RA 3E9BA 1ZZ3A 4RHIA 3SJTA 2V5XA 2VQMA 5DC5A 4ITYA 1P8MA 5FCWA 5ICNB 5G11A 1VKGA 4RN2A 4Q3RC 4RHLA 1WVAA 3E6VA 5EEKA 1P8NA 5EF8A 5EEFA 4RHQA 5G0XA 4IU4A 2VQOA 1T4SA 1TBJA 5G12A 1P8QA 1TA1A 1XFKA 3E6KA 5G0GA 5EFJD 3MZ7A 3SL0A 5EFKB 4BZ8A 4DZ4A 1GQ6A 4ZUQA 4Q3VA 1C3SA 3NIPA 2PHOA 5DC8A 5G1BA 5THSA 3ZNSA 3EZTA 1WVBA 3LP7A 4GSVA 4RN1A 3THJA 5G0YA 3E8QA 5G1CA 4RHMA 4BZ6A 1CEVA 4BKXB 3Q9CA 2CEVA 3LP4A 4GWCA 4Q3RA 2VQJA 3CEVA 4Q3TA 5EFGA 3C10A 4RN0A 1HQ5A 4QA7A 4Q3UA 4QA5A 1T5GA 3PZLA 4MYKA 4ZUNA 5G13A 2EF4A 4Q3SA 4IXVA 4IE1A 1WOIA 3F0RA 4IXUA 5DC6A 4Q3PA 2VQWG 1P8SA 3EWFA 4IU0A 3MAXA 5D1DA 5EEMA 4ZUOA 1T4PA 5EFNA 4FCKA 2EF5A 4ZUPA 3Q9FA 5G10A 4Q41A 1D3VA 4IU5A 5FUEA 2EIVA 1P8PA 3MFWA 5G17A 3SFHA 4RHKA 1HQFA 2VQVA 1RLAA 4QA3A 3EW8A 4ZUMA 5IWGA 3SKKA 1ZZ0A 1TBLA 2VCGA 3F06A 4CBTA 4MYNA 1P8RA 1W22A 3KV2A 1P8OA 2RLAA 4BZ5A 4CEVA 4QA4A 4RLAA 3EZPA 3NIQA 4RHJA 3RLAA 3LHLA 3MZ4A 3ZNRA 5EEIA 3NIOA 1WOHA 5G0IA 4BZ7A 3DJ8A 4MYFA 4FCIA 4GWDA 2ZAVA 4HWWA 1PQ3A 5A2SA 1HQHA 4GSMA 4LY1A 4MYLA 4GSZA 5THVA 5D1CA 5EENA 4LXZA 3SL1A 5IX0A 4HZEA 2PLLA 3MENA 1HQGA 5G1AA 2PHAA 4BZ9A 1R1OA 3THHA 2AEBA 1T69A 1HQXA 1C3RA 4QA6A 3Q9EA 5G0HA 3F07A 3MZ6A 1T67A 5EF7A 4CQFA 4QA2A 3SFFA 5JI5A 2VQQA 3M1RA 1GQ7A 1T5FA 3TH7A 5D1BA 5RLAA 1ZPGA 4A69A 5CEVA 2V5WA 4I06A 4Q3QA 5DC7A 5LI3A 1ZZ1A 3C0ZA 3MZ3A 4Q42A 3THEA 4IU1A 5HJAA 2A0MA 3C0YA 1WOGA 3MJLA 3TF3A 3GMZA 3Q9BA
chains in the Genus database with same CATH topology
3E8ZA 4IE2A 1ZPEA 4Q40A 4HXQA 4G3HA 5CEVA 1TBHA 1T4TA 3MMRA 4IE3A 3F80A 3MFVA 4MXRA 3GN0A 5HJ9A 1T4RA 3E9BA 4RHIA 3SJTA 4ITYA 1P8MA 4Q3RC 4RHLA 1WVAA 3E6VA 1P8NA 4RHQA 4IU4A 1T4SA 1TBJA 1P8QA 1TA1A 1XFKA 3E6KA 3SL0A 5HJAA 4DZ4A 1GQ6A 4Q3VA 3NIPA 2PHOA 1WVBA 3LP7A 4GSVA 3THJA 3E8QA 4RHMA 1CEVA 2CEVA 3LP4A 4GWCA 4Q3RA 3CEVA 4Q3TA 1HQ5A 4Q3UA 1T5GA 3PZLA 4MYKA 2EF4A 4Q3SA 4IXVA 4IE1A 1WOIA 4IXUA 4Q3PA 1P8SA 4IU0A 1T4PA 4FCKA 2EF5A 4Q41A 1D3VA 4IU5A 2EIVA 1P8PA 3MFWA 4RHKA 1HQFA 1RLAA 3SKKA 1TBLA 4MYNA 1P8RA 3KV2A 1P8OA 2RLAA 4CEVA 4RLAA 3RLAA 3NIQA 4RHJA 3LHLA 3NIOA 1WOHA 3DJ8A 4MYFA 4FCIA 4GWDA 2ZAVA 4HWWA 1PQ3A 1HQHA 4GSMA 4MYLA 4GSZA 3SL1A 4HZEA 2PLLA 1HQGA 2PHAA 1R1OA 3THHA 2AEBA 1HQXA 3M1RA 1GQ7A 1T5FA 3TH7A 5RLAA 1ZPGA 4I06A 4Q3QA 3THEA 4Q42A 4IU1A 2A0MA 3TF3A 1WOGA 3MJLA 3GMZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3E8Z A;  4IE2 A;  1ZPE A;  4Q40 A;  4HXQ A;  4G3H A;  5CEV A;  1TBH A;  1T4T A;  3MMR A;  4IE3 A;  3F80 A;  3MFV A;  4MXR A;  3GN0 A;  5HJ9 A;  1T4R A;  3E9B A;  4RHI A;  3SJT A;  4ITY A;  1P8M A;  4Q3R C;  4RHL A;  1WVA A;  3E6V A;  1P8N A;  4RHQ A;  4IU4 A;  1T4S A;  1TBJ A;  1P8Q A;  1TA1 A;  1XFK A;  3E6K A;  3SL0 A;  5HJA A;  4DZ4 A;  1GQ6 A;  4Q3V A;  3NIP A;  2PHO A;  1WVB A;  3LP7 A;  4GSV A;  3THJ A;  3E8Q A;  4RHM A;  1CEV A;  2CEV A;  3LP4 A;  4GWC A;  4Q3R A;  3CEV A;  4Q3T A;  1HQ5 A;  4Q3U A;  1T5G A;  3PZL A;  4MYK A;  2EF4 A;  4Q3S A;  4IXV A;  4IE1 A;  1WOI A;  4IXU A;  4Q3P A;  1P8S A;  4IU0 A;  1T4P A;  4FCK A;  2EF5 A;  4Q41 A;  1D3V A;  4IU5 A;  2EIV A;  1P8P A;  3MFW A;  4RHK A;  1HQF A;  1RLA A;  3SKK A;  1TBL A;  4MYN A;  1P8R A;  3KV2 A;  1P8O A;  2RLA A;  4CEV A;  4RLA A;  3RLA A;  3NIQ A;  4RHJ A;  3LHL A;  3NIO A;  1WOH A;  3DJ8 A;  4MYF A;  4FCI A;  4GWD A;  2ZAV A;  4HWW A;  1PQ3 A;  1HQH A;  4GSM A;  4MYL A;  4GSZ A;  3SL1 A;  4HZE A;  2PLL A;  1HQG A;  2PHA A;  1R1O A;  3THH A;  2AEB A;  1HQX A;  3M1R A;  1GQ7 A;  1T5F A;  3TH7 A;  5RLA A;  1ZPG A;  4I06 A;  4Q3Q A;  3THE A;  4Q42 A;  4IU1 A;  2A0M A;  3TF3 A;  1WOG A;  3MJL A;  3GMZ A; 
#chains in the Genus database with same CATH topology
 3E8Z A;  4IE2 A;  3RQD A;  1ZPE A;  4ZUR A;  4Q40 A;  4HXQ A;  5THT A;  4G3H A;  5EFB D;  1TBH A;  5EFH A;  1T64 A;  1T4T A;  3MMR A;  4IE3 A;  5G3W A;  2GH6 A;  4CBY A;  3F80 A;  3MFV A;  5BWZ A;  4QA0 A;  5THU A;  1C3P A;  4MXR A;  4QA1 A;  5G0J A;  3GN0 A;  5HJ9 A;  1T4R A;  3E9B A;  1ZZ3 A;  4RHI A;  3SJT A;  2V5X A;  2VQM A;  5DC5 A;  4ITY A;  1P8M A;  5FCW A;  5ICN B;  5G11 A;  1VKG A;  4RN2 A;  4Q3R C;  4RHL A;  1WVA A;  3E6V A;  5EEK A;  1P8N A;  5EF8 A;  5EEF A;  4RHQ A;  5G0X A;  4IU4 A;  2VQO A;  1T4S A;  1TBJ A;  5G12 A;  1P8Q A;  1TA1 A;  1XFK A;  3E6K A;  5G0G A;  5EFJ D;  3MZ7 A;  3SL0 A;  5EFK B;  4BZ8 A;  4DZ4 A;  1GQ6 A;  4ZUQ A;  4Q3V A;  1C3S A;  3NIP A;  2PHO A;  5DC8 A;  5G1B A;  5THS A;  3ZNS A;  3EZT A;  1WVB A;  3LP7 A;  4GSV A;  4RN1 A;  3THJ A;  5G0Y A;  3E8Q A;  5G1C A;  4RHM A;  4BZ6 A;  1CEV A;  4BKX B;  3Q9C A;  2CEV A;  3LP4 A;  4GWC A;  4Q3R A;  2VQJ A;  3CEV A;  4Q3T A;  5EFG A;  3C10 A;  4RN0 A;  1HQ5 A;  4QA7 A;  4Q3U A;  4QA5 A;  1T5G A;  3PZL A;  4MYK A;  4ZUN A;  5G13 A;  2EF4 A;  4Q3S A;  4IXV A;  4IE1 A;  1WOI A;  3F0R A;  4IXU A;  5DC6 A;  4Q3P A;  2VQW G;  1P8S A;  3EWF A;  4IU0 A;  3MAX A;  5D1D A;  5EEM A;  4ZUO A;  1T4P A;  5EFN A;  4FCK A;  2EF5 A;  4ZUP A;  3Q9F A;  5G10 A;  4Q41 A;  1D3V A;  4IU5 A;  5FUE A;  2EIV A;  1P8P A;  3MFW A;  5G17 A;  3SFH A;  4RHK A;  1HQF A;  2VQV A;  1RLA A;  4QA3 A;  3EW8 A;  4ZUM A;  5IWG A;  3SKK A;  1ZZ0 A;  1TBL A;  2VCG A;  3F06 A;  4CBT A;  4MYN A;  1P8R A;  1W22 A;  3KV2 A;  1P8O A;  2RLA A;  4BZ5 A;  4CEV A;  4QA4 A;  4RLA A;  3EZP A;  3NIQ A;  4RHJ A;  3RLA A;  3LHL A;  3MZ4 A;  3ZNR A;  5EEI A;  3NIO A;  1WOH A;  5G0I A;  4BZ7 A;  3DJ8 A;  4MYF A;  4FCI A;  4GWD A;  2ZAV A;  4HWW A;  1PQ3 A;  5A2S A;  1HQH A;  4GSM A;  4LY1 A;  4MYL A;  4GSZ A;  5THV A;  5D1C A;  5EEN A;  4LXZ A;  3SL1 A;  5IX0 A;  4HZE A;  2PLL A;  3MEN A;  1HQG A;  5G1A A;  2PHA A;  4BZ9 A;  1R1O A;  3THH A;  2AEB A;  1T69 A;  1HQX A;  1C3R A;  4QA6 A;  3Q9E A;  5G0H A;  3F07 A;  3MZ6 A;  1T67 A;  5EF7 A;  4CQF A;  4QA2 A;  3SFF A;  5JI5 A;  2VQQ A;  3M1R A;  1GQ7 A;  1T5F A;  3TH7 A;  5D1B A;  5RLA A;  1ZPG A;  4A69 A;  5CEV A;  2V5W A;  4I06 A;  4Q3Q A;  5DC7 A;  5LI3 A;  1ZZ1 A;  3C0Z A;  3MZ3 A;  4Q42 A;  3THE A;  4IU1 A;  5HJA A;  2A0M A;  3C0Y A;  1WOG A;  3MJL A;  3TF3 A;  3GMZ A;  3Q9B A; 
#chains in the Genus database with same CATH homology
 3E8Z A;  4IE2 A;  1ZPE A;  4Q40 A;  4HXQ A;  4G3H A;  5CEV A;  1TBH A;  1T4T A;  3MMR A;  4IE3 A;  3F80 A;  3MFV A;  4MXR A;  3GN0 A;  5HJ9 A;  1T4R A;  3E9B A;  4RHI A;  3SJT A;  4ITY A;  1P8M A;  4Q3R C;  4RHL A;  1WVA A;  3E6V A;  1P8N A;  4RHQ A;  4IU4 A;  1T4S A;  1TBJ A;  1P8Q A;  1TA1 A;  1XFK A;  3E6K A;  3SL0 A;  5HJA A;  4DZ4 A;  1GQ6 A;  4Q3V A;  3NIP A;  2PHO A;  1WVB A;  3LP7 A;  4GSV A;  3THJ A;  3E8Q A;  4RHM A;  1CEV A;  2CEV A;  3LP4 A;  4GWC A;  4Q3R A;  3CEV A;  4Q3T A;  1HQ5 A;  4Q3U A;  1T5G A;  3PZL A;  4MYK A;  2EF4 A;  4Q3S A;  4IXV A;  4IE1 A;  1WOI A;  4IXU A;  4Q3P A;  1P8S A;  4IU0 A;  1T4P A;  4FCK A;  2EF5 A;  4Q41 A;  1D3V A;  4IU5 A;  2EIV A;  1P8P A;  3MFW A;  4RHK A;  1HQF A;  1RLA A;  3SKK A;  1TBL A;  4MYN A;  1P8R A;  3KV2 A;  1P8O A;  2RLA A;  4CEV A;  4RLA A;  3RLA A;  3NIQ A;  4RHJ A;  3LHL A;  3NIO A;  1WOH A;  3DJ8 A;  4MYF A;  4FCI A;  4GWD A;  2ZAV A;  4HWW A;  1PQ3 A;  1HQH A;  4GSM A;  4MYL A;  4GSZ A;  3SL1 A;  4HZE A;  2PLL A;  1HQG A;  2PHA A;  1R1O A;  3THH A;  2AEB A;  1HQX A;  3M1R A;  1GQ7 A;  1T5F A;  3TH7 A;  5RLA A;  1ZPG A;  4I06 A;  4Q3Q A;  3THE A;  4Q42 A;  4IU1 A;  2A0M A;  3TF3 A;  1WOG A;  3MJL A;  3GMZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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