4U6WA

Hsmetap (f220m) in complex with 1-amino-2-propylpentyl]phosphonic acid
Total Genus 101
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
101
sequence length
304
structure length
304
Chain Sequence
YRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLMHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTRRLDSARPHFMS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Methionine aminopeptidase 1
publication title Identification of the Molecular Basis of Inhibitor Selectivity between the Human and Streptococcal Type I Methionine Aminopeptidases
pubmed doi rcsb
source organism Homo sapiens
total genus 101
structure length 304
sequence length 304
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2014-07-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4u6wA00
2BWTA 2BWUA 3FMRA 2GU4A 4S01A 2GTXA 1M35A 2Q95A 3Q6DA 4RZZA 4B28A 2BH3A 2MATA 2V3ZA 3RORA 3PKAA 4ZWOA 1YJ3A 2NQ7A 1CHMA 4RZYA 2BWYA 1N51A 3RVAA 1BN5A 2P99A 2HOWA 2G6PA 4U1BA 1QZYA 1KQ0A 1Y1NA 1BOAA 2IW2A 4QR8A 4U6CA 4PV4A 3MR1A 4A6VA 1C23A 4EGEA 1QXYA 1B59A 2GGBA 4U76A 2EA2A 5CIKA 1C21A 4ZWUA 5FCFA 4U70A 2GU5A 1KQ9A 4FUKA 3PKCA 4FLLA 2V3YA 1XGOA 2BWVA 1WLRA 1JAWA 2GG0A 3MX6A 4IDYA 4PNCA 4U73A 4A6WA 2BHAA 4MATA 5E5BA 2GA2A 1QXWA 2DFIA 3CB5A 1C27A 1WBQA 1XGMA 2B3LA 2BHBA 3S6BA 5CLSA 3IU7A 4JUQA 2BWSA 4FO7A 2BHCA 1XNZA 1MATA 2GG2A 3FMQA 1XGNA 4HXXA 5FCHA 2B3KA 2NQ6A 3MATA 2GGCA 2GZ5A 3L24A 2EVCA 3IU9A 4S2TP 4U6WA 4IF7A 5JHUA 5JFRA 5CDVA 1WN1A 2Q94A 1WY2A 2GG9A 2BWXA 1QXZA 1WL9A 2BN7A 3PKEA 4R60A 1YW9A 4RGZ1 2OAZA 4ZWPA 5CE6A 1O0XA 4IECA 1R5GA 1R58A 4FLJA 3IU8A 2GG8A 3FM3A 2GG3A 2BWWA 4U6EA 1KP0A 3L7GA 3PKDA 1WKMA 3BIQA 2EA4A 2GG7A 1XGSA 4FKCA 4IKRA 4U71A 1YW8A 2Q96A 4S00A 5CDLA 4KM3A 2GU7A 3PKBA 2V6CA 4IKTA 2GG5A 2ADUA 1WL6A 4IPAA 4U6ZA 2Q92A 5CNXA 2GU6A 2EVOA 2BB7A 3BITA 4IKSA 1B6AA 2BHDA 1YW7A 5D6FA 5D6EA 2Q93A 4FLIA 1YVMA 1C22A 4FO8A 1C24A 4U75A 1W7VA 3IG4A 4S2RP 2ZSGA 4OOKA 2P9AA 4IU6A 1R5HA 5CDEA 3BIPA 3D27A 4Z7MA 4U6JA 2EVMA 2OKNA 3TB5A 2B3HA 3CTZA 4FLKA 1PV9A 4ZNGA 2P98A 4IKUA 3TAVA 4U69A 5JI6A 1A16A 3CB6A 1W2MA 2V3XA 2Q8KA
chains in the Genus database with same CATH superfamily
2BWTA 2BWUA 3FMRA 2GU4A 4S01A 2GTXA 1M35A 2Q95A 3Q6DA 4RZZA 4B28A 2BH3A 2MATA 2V3ZA 3RORA 3PKAA 4ZWOA 1YJ3A 2NQ7A 1CHMA 4RZYA 2BWYA 1N51A 3RVAA 1BN5A 2P99A 2HOWA 2G6PA 4U1BA 1QZYA 1KQ0A 1Y1NA 1BOAA 2IW2A 4QR8A 4U6CA 4PV4A 3MR1A 4A6VA 1C23A 4EGEA 1QXYA 1B59A 2GGBA 4U76A 2EA2A 5CIKA 1C21A 4ZWUA 5FCFA 4U70A 2GU5A 1KQ9A 4FUKA 3PKCA 4FLLA 2V3YA 1XGOA 2BWVA 1WLRA 1JAWA 2GG0A 3MX6A 4IDYA 4PNCA 4U73A 4A6WA 2BHAA 4MATA 5E5BA 2GA2A 1QXWA 2DFIA 3CB5A 1C27A 1WBQA 1XGMA 2B3LA 2BHBA 3S6BA 5CLSA 3IU7A 4JUQA 2BWSA 4FO7A 2BHCA 1XNZA 1MATA 2GG2A 3FMQA 1XGNA 4HXXA 5FCHA 2B3KA 2NQ6A 3MATA 2GGCA 2GZ5A 3L24A 2EVCA 3IU9A 4S2TP 4U6WA 4IF7A 5JHUA 5JFRA 5CDVA 1WN1A 2Q94A 1WY2A 2GG9A 2BWXA 1QXZA 1WL9A 2BN7A 3PKEA 4R60A 1YW9A 4RGZ1 2OAZA 4ZWPA 5CE6A 1O0XA 4IECA 1R5GA 1R58A 4FLJA 3IU8A 2GG8A 3FM3A 2GG3A 2BWWA 4U6EA 1KP0A 3L7GA 3PKDA 1WKMA 3BIQA 2EA4A 2GG7A 1XGSA 4FKCA 4IKRA 4U71A 1YW8A 2Q96A 4S00A 5CDLA 4KM3A 2GU7A 3PKBA 2V6CA 4IKTA 2GG5A 2ADUA 1WL6A 4IPAA 4U6ZA 2Q92A 5CNXA 2GU6A 2EVOA 2BB7A 3BITA 4IKSA 1B6AA 2BHDA 1YW7A 5D6FA 5D6EA 2Q93A 4FLIA 1YVMA 1C22A 4FO8A 1C24A 4U75A 1W7VA 3IG4A 4S2RP 2ZSGA 4OOKA 2P9AA 4IU6A 1R5HA 5CDEA 3BIPA 3D27A 4Z7MA 4U6JA 2EVMA 2OKNA 3TB5A 2B3HA 3CTZA 4FLKA 1PV9A 4ZNGA 2P98A 4IKUA 3TAVA 4U69A 5JI6A 1A16A 3CB6A 1W2MA 2V3XA 2Q8KA
chains in the Genus database with same CATH topology
2BWTA 2BWUA 3FMRA 2GU4A 4S01A 2GTXA 1M35A 2Q95A 3Q6DA 4RZZA 4B28A 2BH3A 2MATA 2V3ZA 3RORA 3PKAA 4ZWOA 1YJ3A 2NQ7A 1CHMA 4RZYA 2BWYA 1N51A 3RVAA 1BN5A 2P99A 2HOWA 2G6PA 4U1BA 1QZYA 1KQ0A 1Y1NA 1BOAA 2IW2A 4QR8A 4U6CA 4PV4A 3MR1A 4A6VA 1C23A 4EGEA 1QXYA 1B59A 2GGBA 4U76A 2EA2A 5CIKA 1C21A 4ZWUA 5FCFA 4U70A 2GU5A 1KQ9A 4FUKA 3PKCA 4FLLA 2V3YA 1XGOA 2BWVA 1WLRA 1JAWA 2GG0A 3MX6A 4IDYA 4PNCA 4U73A 4A6WA 2BHAA 4MATA 5E5BA 2GA2A 1QXWA 2DFIA 3CB5A 1C27A 1WBQA 1XGMA 2B3LA 2BHBA 3S6BA 5CLSA 3IU7A 4JUQA 2BWSA 4FO7A 2BHCA 1XNZA 1MATA 2GG2A 3FMQA 1XGNA 4HXXA 5FCHA 2B3KA 2NQ6A 3MATA 2GGCA 2GZ5A 3L24A 2EVCA 3IU9A 4S2TP 4U6WA 4IF7A 5JHUA 5JFRA 5CDVA 1WN1A 2Q94A 1WY2A 2GG9A 2BWXA 1QXZA 1WL9A 2BN7A 3PKEA 4R60A 1YW9A 4RGZ1 2OAZA 4ZWPA 5CE6A 1O0XA 4IECA 1R5GA 1R58A 4FLJA 3IU8A 2GG8A 3FM3A 2GG3A 2BWWA 4U6EA 1KP0A 3L7GA 3PKDA 1WKMA 3BIQA 2EA4A 2GG7A 1XGSA 4FKCA 4IKRA 4U71A 1YW8A 2Q96A 4S00A 5CDLA 4KM3A 2GU7A 3PKBA 2V6CA 4IKTA 2GG5A 2ADUA 1WL6A 4IPAA 4U6ZA 2Q92A 5CNXA 2GU6A 2EVOA 2BB7A 3BITA 4IKSA 1B6AA 2BHDA 1YW7A 5D6FA 5D6EA 2Q93A 4FLIA 1YVMA 1C22A 4FO8A 1C24A 4U75A 1W7VA 3IG4A 4S2RP 2ZSGA 4OOKA 2P9AA 4IU6A 1R5HA 5CDEA 3BIPA 3D27A 4Z7MA 4U6JA 2EVMA 2OKNA 3TB5A 2B3HA 3CTZA 4FLKA 1PV9A 4ZNGA 2P98A 4IKUA 3TAVA 4U69A 5JI6A 1A16A 3CB6A 1W2MA 2V3XA 2Q8KA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BWT A;  2BWU A;  3FMR A;  2GU4 A;  4S01 A;  2GTX A;  1M35 A;  2Q95 A;  3Q6D A;  4RZZ A;  4B28 A;  2BH3 A;  2MAT A;  2V3Z A;  3ROR A;  3PKA A;  4ZWO A;  1YJ3 A;  2NQ7 A;  1CHM A;  4RZY A;  2BWY A;  1N51 A;  3RVA A;  1BN5 A;  2P99 A;  2HOW A;  2G6P A;  4U1B A;  1QZY A;  1KQ0 A;  1Y1N A;  1BOA A;  2IW2 A;  4QR8 A;  4U6C A;  4PV4 A;  3MR1 A;  4A6V A;  1C23 A;  4EGE A;  1QXY A;  1B59 A;  2GGB A;  4U76 A;  2EA2 A;  5CIK A;  1C21 A;  4ZWU A;  5FCF A;  4U70 A;  2GU5 A;  1KQ9 A;  4FUK A;  3PKC A;  4FLL A;  2V3Y A;  1XGO A;  2BWV A;  1WLR A;  1JAW A;  2GG0 A;  3MX6 A;  4IDY A;  4PNC A;  4U73 A;  4A6W A;  2BHA A;  4MAT A;  5E5B A;  2GA2 A;  1QXW A;  2DFI A;  3CB5 A;  1C27 A;  1WBQ A;  1XGM A;  2B3L A;  2BHB A;  3S6B A;  5CLS A;  3IU7 A;  4JUQ A;  2BWS A;  4FO7 A;  2BHC A;  1XNZ A;  1MAT A;  2GG2 A;  3FMQ A;  1XGN A;  4HXX A;  5FCH A;  2B3K A;  2NQ6 A;  3MAT A;  2GGC A;  2GZ5 A;  3L24 A;  2EVC A;  3IU9 A;  4S2T P;  4U6W A;  4IF7 A;  5JHU A;  5JFR A;  5CDV A;  1WN1 A;  2Q94 A;  1WY2 A;  2GG9 A;  2BWX A;  1QXZ A;  1WL9 A;  2BN7 A;  3PKE A;  4R60 A;  1YW9 A;  4RGZ 1;  2OAZ A;  4ZWP A;  5CE6 A;  1O0X A;  4IEC A;  1R5G A;  1R58 A;  4FLJ A;  3IU8 A;  2GG8 A;  3FM3 A;  2GG3 A;  2BWW A;  4U6E A;  1KP0 A;  3L7G A;  3PKD A;  1WKM A;  3BIQ A;  2EA4 A;  2GG7 A;  1XGS A;  4FKC A;  4IKR A;  4U71 A;  1YW8 A;  2Q96 A;  4S00 A;  5CDL A;  4KM3 A;  2GU7 A;  3PKB A;  2V6C A;  4IKT A;  2GG5 A;  2ADU A;  1WL6 A;  4IPA A;  4U6Z A;  2Q92 A;  5CNX A;  2GU6 A;  2EVO A;  2BB7 A;  3BIT A;  4IKS A;  1B6A A;  2BHD A;  1YW7 A;  5D6F A;  5D6E A;  2Q93 A;  4FLI A;  1YVM A;  1C22 A;  4FO8 A;  1C24 A;  4U75 A;  1W7V A;  3IG4 A;  4S2R P;  2ZSG A;  4OOK A;  2P9A A;  4IU6 A;  1R5H A;  5CDE A;  3BIP A;  3D27 A;  4Z7M A;  4U6J A;  2EVM A;  2OKN A;  3TB5 A;  2B3H A;  3CTZ A;  4FLK A;  1PV9 A;  4ZNG A;  2P98 A;  4IKU A;  3TAV A;  4U69 A;  5JI6 A;  1A16 A;  3CB6 A;  1W2M A;  2V3X A;  2Q8K A; 
#chains in the Genus database with same CATH topology
 2BWT A;  2BWU A;  3FMR A;  2GU4 A;  4S01 A;  2GTX A;  1M35 A;  2Q95 A;  3Q6D A;  4RZZ A;  4B28 A;  2BH3 A;  2MAT A;  2V3Z A;  3ROR A;  3PKA A;  4ZWO A;  1YJ3 A;  2NQ7 A;  1CHM A;  4RZY A;  2BWY A;  1N51 A;  3RVA A;  1BN5 A;  2P99 A;  2HOW A;  2G6P A;  4U1B A;  1QZY A;  1KQ0 A;  1Y1N A;  1BOA A;  2IW2 A;  4QR8 A;  4U6C A;  4PV4 A;  3MR1 A;  4A6V A;  1C23 A;  4EGE A;  1QXY A;  1B59 A;  2GGB A;  4U76 A;  2EA2 A;  5CIK A;  1C21 A;  4ZWU A;  5FCF A;  4U70 A;  2GU5 A;  1KQ9 A;  4FUK A;  3PKC A;  4FLL A;  2V3Y A;  1XGO A;  2BWV A;  1WLR A;  1JAW A;  2GG0 A;  3MX6 A;  4IDY A;  4PNC A;  4U73 A;  4A6W A;  2BHA A;  4MAT A;  5E5B A;  2GA2 A;  1QXW A;  2DFI A;  3CB5 A;  1C27 A;  1WBQ A;  1XGM A;  2B3L A;  2BHB A;  3S6B A;  5CLS A;  3IU7 A;  4JUQ A;  2BWS A;  4FO7 A;  2BHC A;  1XNZ A;  1MAT A;  2GG2 A;  3FMQ A;  1XGN A;  4HXX A;  5FCH A;  2B3K A;  2NQ6 A;  3MAT A;  2GGC A;  2GZ5 A;  3L24 A;  2EVC A;  3IU9 A;  4S2T P;  4U6W A;  4IF7 A;  5JHU A;  5JFR A;  5CDV A;  1WN1 A;  2Q94 A;  1WY2 A;  2GG9 A;  2BWX A;  1QXZ A;  1WL9 A;  2BN7 A;  3PKE A;  4R60 A;  1YW9 A;  4RGZ 1;  2OAZ A;  4ZWP A;  5CE6 A;  1O0X A;  4IEC A;  1R5G A;  1R58 A;  4FLJ A;  3IU8 A;  2GG8 A;  3FM3 A;  2GG3 A;  2BWW A;  4U6E A;  1KP0 A;  3L7G A;  3PKD A;  1WKM A;  3BIQ A;  2EA4 A;  2GG7 A;  1XGS A;  4FKC A;  4IKR A;  4U71 A;  1YW8 A;  2Q96 A;  4S00 A;  5CDL A;  4KM3 A;  2GU7 A;  3PKB A;  2V6C A;  4IKT A;  2GG5 A;  2ADU A;  1WL6 A;  4IPA A;  4U6Z A;  2Q92 A;  5CNX A;  2GU6 A;  2EVO A;  2BB7 A;  3BIT A;  4IKS A;  1B6A A;  2BHD A;  1YW7 A;  5D6F A;  5D6E A;  2Q93 A;  4FLI A;  1YVM A;  1C22 A;  4FO8 A;  1C24 A;  4U75 A;  1W7V A;  3IG4 A;  4S2R P;  2ZSG A;  4OOK A;  2P9A A;  4IU6 A;  1R5H A;  5CDE A;  3BIP A;  3D27 A;  4Z7M A;  4U6J A;  2EVM A;  2OKN A;  3TB5 A;  2B3H A;  3CTZ A;  4FLK A;  1PV9 A;  4ZNG A;  2P98 A;  4IKU A;  3TAV A;  4U69 A;  5JI6 A;  1A16 A;  3CB6 A;  1W2M A;  2V3X A;  2Q8K A; 
#chains in the Genus database with same CATH homology
 2BWT A;  2BWU A;  3FMR A;  2GU4 A;  4S01 A;  2GTX A;  1M35 A;  2Q95 A;  3Q6D A;  4RZZ A;  4B28 A;  2BH3 A;  2MAT A;  2V3Z A;  3ROR A;  3PKA A;  4ZWO A;  1YJ3 A;  2NQ7 A;  1CHM A;  4RZY A;  2BWY A;  1N51 A;  3RVA A;  1BN5 A;  2P99 A;  2HOW A;  2G6P A;  4U1B A;  1QZY A;  1KQ0 A;  1Y1N A;  1BOA A;  2IW2 A;  4QR8 A;  4U6C A;  4PV4 A;  3MR1 A;  4A6V A;  1C23 A;  4EGE A;  1QXY A;  1B59 A;  2GGB A;  4U76 A;  2EA2 A;  5CIK A;  1C21 A;  4ZWU A;  5FCF A;  4U70 A;  2GU5 A;  1KQ9 A;  4FUK A;  3PKC A;  4FLL A;  2V3Y A;  1XGO A;  2BWV A;  1WLR A;  1JAW A;  2GG0 A;  3MX6 A;  4IDY A;  4PNC A;  4U73 A;  4A6W A;  2BHA A;  4MAT A;  5E5B A;  2GA2 A;  1QXW A;  2DFI A;  3CB5 A;  1C27 A;  1WBQ A;  1XGM A;  2B3L A;  2BHB A;  3S6B A;  5CLS A;  3IU7 A;  4JUQ A;  2BWS A;  4FO7 A;  2BHC A;  1XNZ A;  1MAT A;  2GG2 A;  3FMQ A;  1XGN A;  4HXX A;  5FCH A;  2B3K A;  2NQ6 A;  3MAT A;  2GGC A;  2GZ5 A;  3L24 A;  2EVC A;  3IU9 A;  4S2T P;  4U6W A;  4IF7 A;  5JHU A;  5JFR A;  5CDV A;  1WN1 A;  2Q94 A;  1WY2 A;  2GG9 A;  2BWX A;  1QXZ A;  1WL9 A;  2BN7 A;  3PKE A;  4R60 A;  1YW9 A;  4RGZ 1;  2OAZ A;  4ZWP A;  5CE6 A;  1O0X A;  4IEC A;  1R5G A;  1R58 A;  4FLJ A;  3IU8 A;  2GG8 A;  3FM3 A;  2GG3 A;  2BWW A;  4U6E A;  1KP0 A;  3L7G A;  3PKD A;  1WKM A;  3BIQ A;  2EA4 A;  2GG7 A;  1XGS A;  4FKC A;  4IKR A;  4U71 A;  1YW8 A;  2Q96 A;  4S00 A;  5CDL A;  4KM3 A;  2GU7 A;  3PKB A;  2V6C A;  4IKT A;  2GG5 A;  2ADU A;  1WL6 A;  4IPA A;  4U6Z A;  2Q92 A;  5CNX A;  2GU6 A;  2EVO A;  2BB7 A;  3BIT A;  4IKS A;  1B6A A;  2BHD A;  1YW7 A;  5D6F A;  5D6E A;  2Q93 A;  4FLI A;  1YVM A;  1C22 A;  4FO8 A;  1C24 A;  4U75 A;  1W7V A;  3IG4 A;  4S2R P;  2ZSG A;  4OOK A;  2P9A A;  4IU6 A;  1R5H A;  5CDE A;  3BIP A;  3D27 A;  4Z7M A;  4U6J A;  2EVM A;  2OKN A;  3TB5 A;  2B3H A;  3CTZ A;  4FLK A;  1PV9 A;  4ZNG A;  2P98 A;  4IKU A;  3TAV A;  4U69 A;  5JI6 A;  1A16 A;  3CB6 A;  1W2M A;  2V3X A;  2Q8K A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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