4UY2C

Crystal structure of the complex of the extracellular domain of human alpha9 nachr with alpha-bungarotoxin.
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
73
structure length
73
Chain Sequence
IVCHTTATSPISAVTCPPGENLCYRKMWCDVFCSSRGKVVELGCAATCPSKKPYEEVTCCSTDKCNPHPKQRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin-binding protein/toxin
molecule keywords NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA-9
publication title Crystal Structures of Free and Antagonist-Bound States of Human Alpha9 Nicotinic Receptor Extracellular Domain
pubmed doi rcsb
source organism Homo sapiens
total genus 7
structure length 73
sequence length 73
chains with identical sequence D
ec nomenclature
pdb deposition date 2014-08-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 4uy2C00
1UG4A 2L03A 1ZADA 2N99A 5DO6A 2CDXA 1ONJA 1KU6B 1RGJA 1JBDA 2GOOB 1CDQA 2H64C 1FFJA 1L4WA 1XT3A 2MJ4A 2PJYC 1RL5A 1IDHA 1CODA 1FRAA 1NTNA 3FEVA 2CRSA 1MAHF 3BT2U 5EBXA 2CTXA 2GOOC 1KXIA 1CDTA 2CRTA 1CXOA 4DO8A 1COEA 4QTIU 1M9ZA 1CTXA 1CCQA 1F94A 2ABXA 4OM5A 3KFDE 1CDRA 1NORA 1NTXA 1TXBA 3BT1U 2QC1A 1B41B 1ABTA 2LA1A 2QJAC 3HH7A 2JVEA 4IYEA 2X8BB 1KC4A 1LXGA 1F8UB 1JGKA 2I9BE 3U74U 1IDLA 1QKDA 2H7ZB 4UY2C 2QJBC 1LX5B 4LFTA 2MJ0A 1PLOA 5DZ5A 1CREA 2MJYA 2H62C 1H0JA 2BTXA 2UWRA 2NBTA 2MUOA 5DU1A 1YWHA 6EBXA 1BTEA 1HAAA 3KFDI 4RUDA 2H7ZA 1S4YA 3ERAA 2ERAA 3EBXA 4XJJA 1NYUA 1HAJA 2K3GA 1IQ9A 1W6BA 2VLWA 1JE9A 1ERAA 4AEAA 1FSCA 3NH7A 3EVSC 2BHIA 3NDSA 1BXPA 2HLQA 1TGXA 1CDSA 1IDIA 1KBAA 1DRSA 1V6PA 1CVOA 1KL8A 3VTSA 1FF4A 1QM7A 2UX2A 4OM4A 1LJZA 2H62D 4HQPF 4ZQYA 5IMYC 1ERGA 1REWC 2FD6U 1LXHA 1NYSA 1KTZB 1ES7B 1CB9A 4BDTB 2L5SA 1TFSA 2HLRA 1I02A 3LAQU 1HC9B 1IDGA 2OFSA 2PJYB 1LSIA 4BIKB 1QKEA 4FAOE 1KS6A 1NEAA 2LCRA 1MR6A 2MFAA 1IJCA 1CRFA 1IKCA 1KFHA 3PLCA 1TXAA 4P7UA 1HC9A 4EY8B 3U73U 2J8BA 4FAOC 1NXBA 2MHYA 1CXNA 2QJ9C 1CHVS 1KBSA 1HOYA 1IK8A 1FSSB 1KBTA 2CCXA 2JQPA 2MUPA 2H8UA 1VB0A 1FASA 3QB4B 3NEQA 5IMTD 2H64B 2H5FA 1G6MA
chains in the Genus database with same CATH superfamily
1UG4A 2L03A 1ZADA 2N99A 5DO6A 2CDXA 1ONJA 1KU6B 1RGJA 1JBDA 2GOOB 1CDQA 2H64C 1FFJA 1L4WA 1XT3A 2MJ4A 2PJYC 1RL5A 1IDHA 1CODA 1FRAA 1NTNA 3FEVA 2CRSA 1MAHF 3BT2U 5EBXA 2CTXA 2GOOC 1KXIA 1CDTA 2CRTA 1CXOA 4DO8A 1COEA 4QTIU 1M9ZA 1CTXA 1CCQA 1F94A 2ABXA 4OM5A 3KFDE 1CDRA 1NORA 1NTXA 1TXBA 3BT1U 2QC1A 1B41B 1ABTA 2LA1A 2QJAC 4KSNA 3HH7A 2JVEA 4IYEA 2X8BB 1KC4A 1LXGA 1F8UB 1JGKA 2I9BE 3U74U 1IDLA 1QKDA 2H7ZB 4UY2C 2QJBC 1LX5B 4LFTA 2MJ0A 1PLOA 5DZ5A 1CREA 2MJYA 2H62C 1H0JA 2BTXA 2UWRA 2NBTA 2MUOA 5DU1A 1YWHA 6EBXA 1BTEA 1HAAA 3KFDI 4RUDA 2H7ZA 1S4YA 3ERAA 2ERAA 3EBXA 4XJJA 1NYUA 1HAJA 2K3GA 1IQ9A 1W6BA 2VLWA 1JE9A 1ERAA 4AEAA 1FSCA 3NH7A 3EVSC 2BHIA 3NDSA 1BXPA 2HLQA 1TGXA 1CDSA 1IDIA 1KBAA 1DRSA 1V6PA 1CVOA 1KL8A 3VTSA 1FF4A 1QM7A 2UX2A 4OM4A 1LJZA 2H62D 4HQPF 4ZQYA 5IMYC 1ERGA 1REWC 2FD6U 1LXHA 1NYSA 1KTZB 1ES7B 1CB9A 4BDTB 2L5SA 1TFSA 2HLRA 1I02A 3LAQU 1HC9B 1IDGA 2OFSA 2PJYB 1LSIA 4BIKB 1QKEA 4FAOE 1KS6A 1NEAA 2LCRA 1MR6A 2MFAA 1IJCA 1CRFA 1IKCA 1KFHA 3PLCA 1TXAA 4P7UA 1HC9A 4EY8B 3U73U 2J8BA 4FAOC 1NXBA 2MHYA 1CXNA 2QJ9C 1CHVS 1KBSA 1HOYA 1IK8A 1FSSB 1KBTA 2CCXA 2JQPA 2MUPA 2H8UA 1VB0A 1FASA 3QB4B 3NEQA 5IMTD 2H64B 2H5FA 1G6MA
chains in the Genus database with same CATH topology
1UG4A 2L03A 1ZADA 2N99A 5DO6A 2CDXA 1ONJA 1KU6B 1RGJA 1JBDA 2GOOB 1CDQA 2H64C 1FFJA 1L4WA 1XT3A 2MJ4A 2PJYC 1RL5A 1IDHA 1CODA 1FRAA 1NTNA 3FEVA 2CRSA 1MAHF 3BT2U 5EBXA 2CTXA 2GOOC 1KXIA 1CDTA 2CRTA 1CXOA 4DO8A 1COEA 4QTIU 1M9ZA 1CTXA 1CCQA 1F94A 2ABXA 4OM5A 3KFDE 1CDRA 1NORA 1NTXA 1TXBA 3BT1U 2QC1A 1B41B 1ABTA 2LA1A 2QJAC 4KSNA 3HH7A 2JVEA 4IYEA 2X8BB 1KC4A 1LXGA 1F8UB 1JGKA 2I9BE 3U74U 1IDLA 1QKDA 2H7ZB 4UY2C 2QJBC 1LX5B 4LFTA 2MJ0A 1PLOA 5DZ5A 1CREA 2MJYA 2H62C 1H0JA 2BTXA 2UWRA 2NBTA 2MUOA 5DU1A 1YWHA 6EBXA 1BTEA 1HAAA 3KFDI 4RUDA 2H7ZA 1S4YA 3ERAA 2ERAA 3EBXA 4XJJA 1NYUA 1HAJA 2K3GA 1IQ9A 1W6BA 2VLWA 1JE9A 1ERAA 4AEAA 1FSCA 3NH7A 3EVSC 2BHIA 3NDSA 1BXPA 2HLQA 1TGXA 1CDSA 1IDIA 1KBAA 1DRSA 1V6PA 1CVOA 1KL8A 3VTSA 1FF4A 1QM7A 2UX2A 4OM4A 1LJZA 2H62D 4HQPF 4ZQYA 5IMYC 1ERGA 1REWC 2FD6U 1LXHA 1NYSA 1KTZB 1ES7B 1CB9A 4BDTB 2L5SA 1TFSA 2HLRA 1I02A 3LAQU 1HC9B 1IDGA 2OFSA 2PJYB 1LSIA 4BIKB 1QKEA 4FAOE 1KS6A 1NEAA 2LCRA 1MR6A 2MFAA 1IJCA 1CRFA 1IKCA 1KFHA 3PLCA 1TXAA 4P7UA 1HC9A 4EY8B 3U73U 2J8BA 4FAOC 1NXBA 2MHYA 1CXNA 2QJ9C 1CHVS 1KBSA 1HOYA 1IK8A 1FSSB 1KBTA 2CCXA 2JQPA 2MUPA 2H8UA 1VB0A 1FASA 3QB4B 3NEQA 5IMTD 2H64B 2H5FA 1G6MA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UG4 A;  2L03 A;  1ZAD A;  2N99 A;  5DO6 A;  2CDX A;  1ONJ A;  1KU6 B;  1RGJ A;  1JBD A;  2GOO B;  1CDQ A;  2H64 C;  1FFJ A;  1L4W A;  1XT3 A;  2MJ4 A;  2PJY C;  1RL5 A;  1IDH A;  1COD A;  1FRA A;  1NTN A;  3FEV A;  2CRS A;  1MAH F;  3BT2 U;  5EBX A;  2CTX A;  2GOO C;  1KXI A;  1CDT A;  2CRT A;  1CXO A;  4DO8 A;  1COE A;  4QTI U;  1M9Z A;  1CTX A;  1CCQ A;  1F94 A;  2ABX A;  4OM5 A;  3KFD E;  1CDR A;  1NOR A;  1NTX A;  1TXB A;  3BT1 U;  2QC1 A;  1B41 B;  1ABT A;  2LA1 A;  2QJA C;  3HH7 A;  2JVE A;  4IYE A;  2X8B B;  1KC4 A;  1LXG A;  1F8U B;  1JGK A;  2I9B E;  3U74 U;  1IDL A;  1QKD A;  2H7Z B;  4UY2 C;  2QJB C;  1LX5 B;  4LFT A;  2MJ0 A;  1PLO A;  5DZ5 A;  1CRE A;  2MJY A;  2H62 C;  1H0J A;  2BTX A;  2UWR A;  2NBT A;  2MUO A;  5DU1 A;  1YWH A;  6EBX A;  1BTE A;  1HAA A;  3KFD I;  4RUD A;  2H7Z A;  1S4Y A;  3ERA A;  2ERA A;  3EBX A;  4XJJ A;  1NYU A;  1HAJ A;  2K3G A;  1IQ9 A;  1W6B A;  2VLW A;  1JE9 A;  1ERA A;  4AEA A;  1FSC A;  3NH7 A;  3EVS C;  2BHI A;  3NDS A;  1BXP A;  2HLQ A;  1TGX A;  1CDS A;  1IDI A;  1KBA A;  1DRS A;  1V6P A;  1CVO A;  1KL8 A;  3VTS A;  1FF4 A;  1QM7 A;  2UX2 A;  4OM4 A;  1LJZ A;  2H62 D;  4HQP F;  4ZQY A;  5IMY C;  1ERG A;  1REW C;  2FD6 U;  1LXH A;  1NYS A;  1KTZ B;  1ES7 B;  1CB9 A;  4BDT B;  2L5S A;  1TFS A;  2HLR A;  1I02 A;  3LAQ U;  1HC9 B;  1IDG A;  2OFS A;  2PJY B;  1LSI A;  4BIK B;  1QKE A;  4FAO E;  1KS6 A;  1NEA A;  2LCR A;  1MR6 A;  2MFA A;  1IJC A;  1CRF A;  1IKC A;  1KFH A;  3PLC A;  1TXA A;  4P7U A;  1HC9 A;  4EY8 B;  3U73 U;  2J8B A;  4FAO C;  1NXB A;  2MHY A;  1CXN A;  2QJ9 C;  1CHV S;  1KBS A;  1HOY A;  1IK8 A;  1FSS B;  1KBT A;  2CCX A;  2JQP A;  2MUP A;  2H8U A;  1VB0 A;  1FAS A;  3QB4 B;  3NEQ A;  5IMT D;  2H64 B;  2H5F A;  1G6M A; 
#chains in the Genus database with same CATH topology
 1UG4 A;  2L03 A;  1ZAD A;  2N99 A;  5DO6 A;  2CDX A;  1ONJ A;  1KU6 B;  1RGJ A;  1JBD A;  2GOO B;  1CDQ A;  2H64 C;  1FFJ A;  1L4W A;  1XT3 A;  2MJ4 A;  2PJY C;  1RL5 A;  1IDH A;  1COD A;  1FRA A;  1NTN A;  3FEV A;  2CRS A;  1MAH F;  3BT2 U;  5EBX A;  2CTX A;  2GOO C;  1KXI A;  1CDT A;  2CRT A;  1CXO A;  4DO8 A;  1COE A;  4QTI U;  1M9Z A;  1CTX A;  1CCQ A;  1F94 A;  2ABX A;  4OM5 A;  3KFD E;  1CDR A;  1NOR A;  1NTX A;  1TXB A;  3BT1 U;  2QC1 A;  1B41 B;  1ABT A;  2LA1 A;  2QJA C;  4KSN A;  3HH7 A;  2JVE A;  4IYE A;  2X8B B;  1KC4 A;  1LXG A;  1F8U B;  1JGK A;  2I9B E;  3U74 U;  1IDL A;  1QKD A;  2H7Z B;  4UY2 C;  2QJB C;  1LX5 B;  4LFT A;  2MJ0 A;  1PLO A;  5DZ5 A;  1CRE A;  2MJY A;  2H62 C;  1H0J A;  2BTX A;  2UWR A;  2NBT A;  2MUO A;  5DU1 A;  1YWH A;  6EBX A;  1BTE A;  1HAA A;  3KFD I;  4RUD A;  2H7Z A;  1S4Y A;  3ERA A;  2ERA A;  3EBX A;  4XJJ A;  1NYU A;  1HAJ A;  2K3G A;  1IQ9 A;  1W6B A;  2VLW A;  1JE9 A;  1ERA A;  4AEA A;  1FSC A;  3NH7 A;  3EVS C;  2BHI A;  3NDS A;  1BXP A;  2HLQ A;  1TGX A;  1CDS A;  1IDI A;  1KBA A;  1DRS A;  1V6P A;  1CVO A;  1KL8 A;  3VTS A;  1FF4 A;  1QM7 A;  2UX2 A;  4OM4 A;  1LJZ A;  2H62 D;  4HQP F;  4ZQY A;  5IMY C;  1ERG A;  1REW C;  2FD6 U;  1LXH A;  1NYS A;  1KTZ B;  1ES7 B;  1CB9 A;  4BDT B;  2L5S A;  1TFS A;  2HLR A;  1I02 A;  3LAQ U;  1HC9 B;  1IDG A;  2OFS A;  2PJY B;  1LSI A;  4BIK B;  1QKE A;  4FAO E;  1KS6 A;  1NEA A;  2LCR A;  1MR6 A;  2MFA A;  1IJC A;  1CRF A;  1IKC A;  1KFH A;  3PLC A;  1TXA A;  4P7U A;  1HC9 A;  4EY8 B;  3U73 U;  2J8B A;  4FAO C;  1NXB A;  2MHY A;  1CXN A;  2QJ9 C;  1CHV S;  1KBS A;  1HOY A;  1IK8 A;  1FSS B;  1KBT A;  2CCX A;  2JQP A;  2MUP A;  2H8U A;  1VB0 A;  1FAS A;  3QB4 B;  3NEQ A;  5IMT D;  2H64 B;  2H5F A;  1G6M A; 
#chains in the Genus database with same CATH homology
 1UG4 A;  2L03 A;  1ZAD A;  2N99 A;  5DO6 A;  2CDX A;  1ONJ A;  1KU6 B;  1RGJ A;  1JBD A;  2GOO B;  1CDQ A;  2H64 C;  1FFJ A;  1L4W A;  1XT3 A;  2MJ4 A;  2PJY C;  1RL5 A;  1IDH A;  1COD A;  1FRA A;  1NTN A;  3FEV A;  2CRS A;  1MAH F;  3BT2 U;  5EBX A;  2CTX A;  2GOO C;  1KXI A;  1CDT A;  2CRT A;  1CXO A;  4DO8 A;  1COE A;  4QTI U;  1M9Z A;  1CTX A;  1CCQ A;  1F94 A;  2ABX A;  4OM5 A;  3KFD E;  1CDR A;  1NOR A;  1NTX A;  1TXB A;  3BT1 U;  2QC1 A;  1B41 B;  1ABT A;  2LA1 A;  2QJA C;  4KSN A;  3HH7 A;  2JVE A;  4IYE A;  2X8B B;  1KC4 A;  1LXG A;  1F8U B;  1JGK A;  2I9B E;  3U74 U;  1IDL A;  1QKD A;  2H7Z B;  4UY2 C;  2QJB C;  1LX5 B;  4LFT A;  2MJ0 A;  1PLO A;  5DZ5 A;  1CRE A;  2MJY A;  2H62 C;  1H0J A;  2BTX A;  2UWR A;  2NBT A;  2MUO A;  5DU1 A;  1YWH A;  6EBX A;  1BTE A;  1HAA A;  3KFD I;  4RUD A;  2H7Z A;  1S4Y A;  3ERA A;  2ERA A;  3EBX A;  4XJJ A;  1NYU A;  1HAJ A;  2K3G A;  1IQ9 A;  1W6B A;  2VLW A;  1JE9 A;  1ERA A;  4AEA A;  1FSC A;  3NH7 A;  3EVS C;  2BHI A;  3NDS A;  1BXP A;  2HLQ A;  1TGX A;  1CDS A;  1IDI A;  1KBA A;  1DRS A;  1V6P A;  1CVO A;  1KL8 A;  3VTS A;  1FF4 A;  1QM7 A;  2UX2 A;  4OM4 A;  1LJZ A;  2H62 D;  4HQP F;  4ZQY A;  5IMY C;  1ERG A;  1REW C;  2FD6 U;  1LXH A;  1NYS A;  1KTZ B;  1ES7 B;  1CB9 A;  4BDT B;  2L5S A;  1TFS A;  2HLR A;  1I02 A;  3LAQ U;  1HC9 B;  1IDG A;  2OFS A;  2PJY B;  1LSI A;  4BIK B;  1QKE A;  4FAO E;  1KS6 A;  1NEA A;  2LCR A;  1MR6 A;  2MFA A;  1IJC A;  1CRF A;  1IKC A;  1KFH A;  3PLC A;  1TXA A;  4P7U A;  1HC9 A;  4EY8 B;  3U73 U;  2J8B A;  4FAO C;  1NXB A;  2MHY A;  1CXN A;  2QJ9 C;  1CHV S;  1KBS A;  1HOY A;  1IK8 A;  1FSS B;  1KBT A;  2CCX A;  2JQP A;  2MUP A;  2H8U A;  1VB0 A;  1FAS A;  3QB4 B;  3NEQ A;  5IMT D;  2H64 B;  2H5F A;  1G6M A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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