4V62AY

Crystal structure of cyanobacterial photosystem ii
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
28
structure length
28
Chain Sequence
XXXXXXXXXXXXXXXXXXXXXXXXXXXX
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Electron transport
molecule keywords Photosystem Q(B) protein
publication title Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride
pubmed doi rcsb
total genus 5
structure length 28
sequence length 28
chains with identical sequence BY
ec nomenclature
pdb deposition date 2008-01-17
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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