4V7KA9

Structure of rele nuclease bound to the 70s ribosome (postcleavage state)
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
37
structure length
37
Chain Sequence
MKVRASVKRICDKCKVIRRHGRVYVICENPKHKQRQG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribosome
molecule keywords 30S ribosomal protein S2
publication title The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
pubmed doi rcsb
source organism Escherichia coli k-12
total genus 4
structure length 37
sequence length 37
chains with identical sequence B9
ec nomenclature
pdb deposition date 2009-11-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A9 PF00444 Ribosomal_L36 Ribosomal protein L36
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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