4YB9D

Crystal structure of the bovine fructose transporter glut5 in an open inward-facing conformation
Total Genus 150
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
150
sequence length
444
structure length
437
Chain Sequence
LATLIAAFGSSFQYGYNVAAINSPSEFMKDFYAYTYYDRVGEYMNEFYLTLLWSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSELAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGLRSLLANEEGWPILLGLTGIPAVLQLLFLPFFPESPRYLLIQKKDEAAAKSALRRLAEIEEILEEDRAEKAVGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIYLSAGVNEDDVQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGALALQDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVHWLSNFTVGLVFPFIQVGLGAYSFVIFAVICLLTTVYIFLIIPE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Solute carrier family 2, facilitated glucose transporter mem
publication title Structure and mechanism of the mammalian fructose transporter GLUT5.
pubmed doi rcsb
source organism Bos taurus
total genus 150
structure length 437
sequence length 444
ec nomenclature
pdb deposition date 2015-02-18
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1250.20 Mainly Alpha Up-down Bundle Growth Hormone; Chain: A; MFS general substrate transporter like domains 4yb9D00
5D58A 4ZWBA 4APSA 4ZYRA 4IKXA 5EQIA 4TPHA 4IKZA 1PW4A 4U4TA 4GC0A 2Y5YA 1PV7A 4JREA 4IU9A 4PYPA 5GXBA 4W6VA 3O7QA 4Q65A 2CFPA 4XNIA 4ZW9A 4YB9D 4ZWCA 4D2CA 5C65A 4U4WA 4IKVA 4GBYA 4OH3A 4UVMA 4D2DA 1PV6A 4IKYA 4XNJA 2V8NA 5D6KA 5EQGA 5A2OA 4GBZA 5EQHA 3WDOA 5A2NA 4LEPA 4TPJA 4U4VA 4OAAA 4D2BA 4JA3A 4JR9A 4LDSA 5D59A 2CFQA 4IKWA 4IU8A 3O7PA 4YBQA 4TPGA 4QIQA 4J05A 2XUTA
chains in the Genus database with same CATH superfamily
2R92D 3PIVA 4XNIA 3UEZE 5IYBD 1HZIA 1ETEA 4IKVA 4NEMA 1Y14A 4YUEC 4DKCA 3TGXB 5TS9A 2Y5YA 1J7VL 1IRLA 1ALUA 1QVNA 4D2CA 2B91A 3N06A 3UX9A 5EQGA 2C35A 4OAAA 4D2BA 1HGUA 4LDSA 1WU3I 2LMSA 5FUCA 4APSA 4IKXA 3OQ3A 2R7ZD 3O7QA 4O6KA 3Q1SI 3H3VE 4YPGC 1F45B 3BPLA 4A3MD 1ITMA 1F6FA 4A3JD 1V7MV 4DOHA 3H0GD 1EVSA 4NEJA 1BGCA 3I4ND 2Q14A 1BGEA 3I4MD 1HIJA 4A3BD 1PW4A 1D9CA 4JREA 3S9DA 1CD9A 1M4RA 1ITIA 3FKID 3NPZA 4BY7D 2OQPA 3SE4B 2VUMD 2B5IA 1M4BA 4D2DA 3HOWD 1PV6A 5C3ED 1Y1VD 1GA3A 1HULA 5D70A 2B63D 3SE3B 3MZGA 3QT2C 2GMFA 1RW5A 2XUTA 3HHRA 4RS1A 4A3FD 4PYPA 4YB9D 1SCFA 3G9VB 4OH3A 4EXPA 1RFBA 3D85C 2O26A 1HIKA 5IYDD 4GRWA 1IL6A 1Z7CA 3LB6A 4YBQA 1LKIA 1IJZA 5D58A 1BP3A 3BPOA 4WRLB 5EQIA 4U4TA 2KZ1A 2L3YA 3DUHC 4O9HA 3QWRB 2CFPA 1ITLA 2HYMB 1B5LA 3WCYI 4GBYA 4UVMA 3QB7A 5D6KA 5IP7D 5D28B 1D9GA 2H24A 1AXIA 4IKWA 4IU8A 1I1RB 3BPNA 3N0PA 1KF9A 4X51A 4TPHA 1IARA 5L6YC 2Q98A 3QB1A 1M4CA 4ZW9A 4A3GD 2JA7D 1VLKA 5C65A 2INTA 5D71A 5A2NA 5EQHA 4LEPA 1WCMD 3B5KA 1FG9A 2E9WC 2O27A 3UF2A 5D72A 1RCBA 4ZYRA 3D48P 1P9MB 4ZF7A 4A3CD 4GS7A 4YQXA 4U4WA 5E4EA 4PS4A 4I77Z 1AX8A 4JR9A 3HOZD 2ILKA 4TPGA 3L5WI 3HOUD 4BBSD 4A3KD 1HWHA 1JLIA 2B8YA 3AYHA 4LRLA 5C4XD 1BBNA 2D48A 2B8UA 4DKFA 1GNCA 2B90A 4DKEA 1Y6ML 4CNIC 4NN6A 5FLMD 3EJJA 5C44D 2CFQA 5C7XA 3D87A 3NCBA 3NCEA 2R93D 1Z92A 3HHCA 1M49A 5LQBA 2LAGA 3UF5A 1NBPA 1PY2A 4ZS7A 3WDOA 4BY1D 2Z3RA 4A3LD 4JA3A 5IP9D 1YKBA 1LK3A 5D59A 4EXNA 1HWGA 3O7PA 4A3ID 4QIQA 2CYKA 3HOVD 3OG6A 2JA5D 2D9QA 1LQSL 4IU9A 1EERA 2B8ZA 4W6VA 3PIWA 2XQBA 5D22A 1EXZA 1A22A 4XNJA 1INRA 1AU1A 1IK0A 2Z3QA 5KNHI 4Z5RD 5FHXA 4NI7A 4NN5A 1ILKA 4ZWBA 3INKC 4J4LC 4GC0A 4DKDA 3DGCL 4NI9A 2IL6A 1BGDA 1M48A 1FYHA 3BESL 3IRHA 4A3DD 4MHLA 4TPJA 1V7NV 3G6DA 3NCCA 5IYCD 1HUWA 4IKZA 3HOYD 1PW6A 1PV7A 2L3OA 3DI2A 3HMXB 1PVHB 4U4VA 3OG4A 3PO3D 1ITFA 1EKUA 1A7MA 4A3ED 2O6IA 3EW3A 1M4AA 3L5XA 4NN7A 4BBRD 4A93D 1Y1WD 3QAZA 3PO2D 5GXBA 3VA2A 3NCFA 4Q65A 1M47A 3HOXD 4ZWCA 3DI3A 3LB6B 1RHGA 5A2OA 4YDYI 1PGRA 3DLQI 1CNT1 2JA6D 2B8XA 1BUYA 4NKQC 4J05A 2ERJD 1N1FA 4FA8E 1BCNA 1CYLA 1CN4C 1Y6KL 4IKYA 2V8NA 1Y6NL 2JA8D 4GBZA 2PSMA 4BXXD 2Q7NB 1EMRA 1CSGA
chains in the Genus database with same CATH topology
5D58A 4ZWBA 4APSA 4ZYRA 4IKXA 5EQIA 4TPHA 4IKZA 1PW4A 4U4TA 4GC0A 2Y5YA 1PV7A 4JREA 4IU9A 4PYPA 5GXBA 4W6VA 3O7QA 4Q65A 2CFPA 4XNIA 4ZW9A 4YB9D 4ZWCA 4D2CA 5C65A 4U4WA 4IKVA 4GBYA 4OH3A 4UVMA 4D2DA 1PV6A 4IKYA 4XNJA 2V8NA 5D6KA 5EQGA 5A2OA 4GBZA 5EQHA 3WDOA 5A2NA 4LEPA 4TPJA 4U4VA 4OAAA 4D2BA 4JA3A 4JR9A 4LDSA 5D59A 2CFQA 4IKWA 4IU8A 3O7PA 4YBQA 4TPGA 4QIQA 4J05A 2XUTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D58 A;  4ZWB A;  4APS A;  4ZYR A;  4IKX A;  5EQI A;  4TPH A;  4IKZ A;  1PW4 A;  4U4T A;  4GC0 A;  2Y5Y A;  1PV7 A;  4JRE A;  4IU9 A;  4PYP A;  5GXB A;  4W6V A;  3O7Q A;  4Q65 A;  2CFP A;  4XNI A;  4ZW9 A;  4YB9 D;  4ZWC A;  4D2C A;  5C65 A;  4U4W A;  4IKV A;  4GBY A;  4OH3 A;  4UVM A;  4D2D A;  1PV6 A;  4IKY A;  4XNJ A;  2V8N A;  5D6K A;  5EQG A;  5A2O A;  4GBZ A;  5EQH A;  3WDO A;  5A2N A;  4LEP A;  4TPJ A;  4U4V A;  4OAA A;  4D2B A;  4JA3 A;  4JR9 A;  4LDS A;  5D59 A;  2CFQ A;  4IKW A;  4IU8 A;  3O7P A;  4YBQ A;  4TPG A;  4QIQ A;  4J05 A;  2XUT A; 
#chains in the Genus database with same CATH topology
 2R92 D;  3PIV A;  4XNI A;  3UEZ E;  5IYB D;  1HZI A;  1ETE A;  4IKV A;  4NEM A;  1Y14 A;  4YUE C;  4DKC A;  3TGX B;  5TS9 A;  2Y5Y A;  1J7V L;  1IRL A;  1ALU A;  1QVN A;  4D2C A;  2B91 A;  3N06 A;  3UX9 A;  5EQG A;  2C35 A;  4OAA A;  4D2B A;  1HGU A;  4LDS A;  1WU3 I;  2LMS A;  5FUC A;  4APS A;  4IKX A;  3OQ3 A;  2R7Z D;  3O7Q A;  4O6K A;  3Q1S I;  3H3V E;  4YPG C;  1F45 B;  3BPL A;  4A3M D;  1ITM A;  1F6F A;  4A3J D;  1V7M V;  4DOH A;  3H0G D;  1EVS A;  4NEJ A;  1BGC A;  3I4N D;  2Q14 A;  1BGE A;  3I4M D;  1HIJ A;  4A3B D;  1PW4 A;  1D9C A;  4JRE A;  3S9D A;  1CD9 A;  1M4R A;  1ITI A;  3FKI D;  3NPZ A;  4BY7 D;  2OQP A;  3SE4 B;  2VUM D;  2B5I A;  1M4B A;  4D2D A;  3HOW D;  1PV6 A;  5C3E D;  1Y1V D;  1GA3 A;  1HUL A;  5D70 A;  2B63 D;  3SE3 B;  3MZG A;  3QT2 C;  2GMF A;  1RW5 A;  2XUT A;  3HHR A;  4RS1 A;  4A3F D;  4PYP A;  4YB9 D;  1SCF A;  3G9V B;  4OH3 A;  4EXP A;  1RFB A;  3D85 C;  2O26 A;  1HIK A;  5IYD D;  4GRW A;  1IL6 A;  1Z7C A;  3LB6 A;  4YBQ A;  1LKI A;  1IJZ A;  5D58 A;  1BP3 A;  3BPO A;  4WRL B;  5EQI A;  4U4T A;  2KZ1 A;  2L3Y A;  3DUH C;  4O9H A;  3QWR B;  2CFP A;  1ITL A;  2HYM B;  1B5L A;  3WCY I;  4GBY A;  4UVM A;  3QB7 A;  5D6K A;  5IP7 D;  5D28 B;  1D9G A;  2H24 A;  1AXI A;  4IKW A;  4IU8 A;  1I1R B;  3BPN A;  3N0P A;  1KF9 A;  4X51 A;  4TPH A;  1IAR A;  5L6Y C;  2Q98 A;  3QB1 A;  1M4C A;  4ZW9 A;  4A3G D;  2JA7 D;  1VLK A;  5C65 A;  2INT A;  5D71 A;  5A2N A;  5EQH A;  4LEP A;  1WCM D;  3B5K A;  1FG9 A;  2E9W C;  2O27 A;  3UF2 A;  5D72 A;  1RCB A;  4ZYR A;  3D48 P;  1P9M B;  4ZF7 A;  4A3C D;  4GS7 A;  4YQX A;  4U4W A;  5E4E A;  4PS4 A;  4I77 Z;  1AX8 A;  4JR9 A;  3HOZ D;  2ILK A;  4TPG A;  3L5W I;  3HOU D;  4BBS D;  4A3K D;  1HWH A;  1JLI A;  2B8Y A;  3AYH A;  4LRL A;  5C4X D;  1BBN A;  2D48 A;  2B8U A;  4DKF A;  1GNC A;  2B90 A;  4DKE A;  1Y6M L;  4CNI C;  4NN6 A;  5FLM D;  3EJJ A;  5C44 D;  2CFQ A;  5C7X A;  3D87 A;  3NCB A;  3NCE A;  2R93 D;  1Z92 A;  3HHC A;  1M49 A;  5LQB A;  2LAG A;  3UF5 A;  1NBP A;  1PY2 A;  4ZS7 A;  3WDO A;  4BY1 D;  2Z3R A;  4A3L D;  4JA3 A;  5IP9 D;  1YKB A;  1LK3 A;  5D59 A;  4EXN A;  1HWG A;  3O7P A;  4A3I D;  4QIQ A;  2CYK A;  3HOV D;  3OG6 A;  2JA5 D;  2D9Q A;  1LQS L;  4IU9 A;  1EER A;  2B8Z A;  4W6V A;  3PIW A;  2XQB A;  5D22 A;  1EXZ A;  1A22 A;  4XNJ A;  1INR A;  1AU1 A;  1IK0 A;  2Z3Q A;  5KNH I;  4Z5R D;  5FHX A;  4NI7 A;  4NN5 A;  1ILK A;  4ZWB A;  3INK C;  4J4L C;  4GC0 A;  4DKD A;  3DGC L;  4NI9 A;  2IL6 A;  1BGD A;  1M48 A;  1FYH A;  3BES L;  3IRH A;  4A3D D;  4MHL A;  4TPJ A;  1V7N V;  3G6D A;  3NCC A;  5IYC D;  1HUW A;  4IKZ A;  3HOY D;  1PW6 A;  1PV7 A;  2L3O A;  3DI2 A;  3HMX B;  1PVH B;  4U4V A;  3OG4 A;  3PO3 D;  1ITF A;  1EKU A;  1A7M A;  4A3E D;  2O6I A;  3EW3 A;  1M4A A;  3L5X A;  4NN7 A;  4BBR D;  4A93 D;  1Y1W D;  3QAZ A;  3PO2 D;  5GXB A;  3VA2 A;  3NCF A;  4Q65 A;  1M47 A;  3HOX D;  4ZWC A;  3DI3 A;  3LB6 B;  1RHG A;  5A2O A;  4YDY I;  1PGR A;  3DLQ I;  1CNT 1;  2JA6 D;  2B8X A;  1BUY A;  4NKQ C;  4J05 A;  2ERJ D;  1N1F A;  4FA8 E;  1BCN A;  1CYL A;  1CN4 C;  1Y6K L;  4IKY A;  2V8N A;  1Y6N L;  2JA8 D;  4GBZ A;  2PSM A;  4BXX D;  2Q7N B;  1EMR A;  1CSG A; 
#chains in the Genus database with same CATH homology
 5D58 A;  4ZWB A;  4APS A;  4ZYR A;  4IKX A;  5EQI A;  4TPH A;  4IKZ A;  1PW4 A;  4U4T A;  4GC0 A;  2Y5Y A;  1PV7 A;  4JRE A;  4IU9 A;  4PYP A;  5GXB A;  4W6V A;  3O7Q A;  4Q65 A;  2CFP A;  4XNI A;  4ZW9 A;  4YB9 D;  4ZWC A;  4D2C A;  5C65 A;  4U4W A;  4IKV A;  4GBY A;  4OH3 A;  4UVM A;  4D2D A;  1PV6 A;  4IKY A;  4XNJ A;  2V8N A;  5D6K A;  5EQG A;  5A2O A;  4GBZ A;  5EQH A;  3WDO A;  5A2N A;  4LEP A;  4TPJ A;  4U4V A;  4OAA A;  4D2B A;  4JA3 A;  4JR9 A;  4LDS A;  5D59 A;  2CFQ A;  4IKW A;  4IU8 A;  3O7P A;  4YBQ A;  4TPG A;  4QIQ A;  4J05 A;  2XUT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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