5A6RA

Crystal structure of the btb domain of human kctd17
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
102
structure length
102
Chain Sequence
WGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD17
publication title Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases.
pubmed doi rcsb
source organism Homo sapiens
total genus 24
structure length 102
sequence length 102
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2015-06-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02214 BTB_2 BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 5a6rA00
4W9LB 2E32B 3ZKJB 3ZTCB 1QDVA 2I2RA 4B9KB 2P1OA 5A15A 3DCGB 2C9WC 4W9DB 3OGLA 3HVEA 3C6NA 5IBKA 3WSOB 2MA9C 2IF5A 4W9GB 1LQBB 1BUOA 2VPKA 5BXHA 5BXBA 4AJYC 4CXIA 4APFA 2YY9A 4W9EB 4ZOUA 4JTDB 2VKPA 1EODA 4B95B 4AWJB 3OGMA 2NN2A 4WQOC 3B84A 4I6JC 2P1QA 3HU6A 3HVEB 1VCBB 1S1GA 3LNMB 2FNJC 4W9JB 3V7DA 3ZUNB 4AP2A 2IHCA 2OVRA 5FTAA 1HV2A 2ASSA 1CS3A 4CP3A 1NEXA 5HYWB 3L2OA 4CXTA 1T1DA 3OGKA 2E31B 4U2MA 3E4UA 1FS1B 5EUPA 2OVPA 2A79B 4BKTB 4CXJA 3M52A 1R2BA 2P1MA 2P1NA 5H7GA 4JTAB 3KVTA 4EOZA 2PPIA 4U2NA 3LUTB 3DRZA 4W9FB 3M8VA 3ZNGB 2ASTA 3I3NA 3C6PA 4W9CB 5A6RA 1A68A 4N9F5 1NN7A 5HZGC 3OHVA 3ZRCB 3BIMA 1R28A 2JZ3C 4UIJA 3M5BA 4W9HB 1LDKD 3C6OA 3ZTDB 4W9IB 1EXBE 5H7HA 4BGCA 2P1PA 1EOFA 4U77A 5DAFA 4UYIA 1EOEA 4CRHA 4JTCB 4JGHC 3M4TA 5BO4C 5LLIB 2R9RB 1P22B 3HQIA 2Q81A 5BXDA 3HTMA 3MKSA 5JH5B 3FKCA 1FQVB 2OVQA 3ZRFB 4W9KB 4BKSB 2NZ0B 1QDWA 3LBZA 4HXIA 1DSXA 2IZVC 2Z8HA 5DADA 4J8ZA 4B9KE 1R29A 3GA1A 1LM8C 1FS2B 4W9HH 3OHUA
chains in the Genus database with same CATH superfamily
4W9LB 2E32B 3ZKJB 3ZTCB 1QDVA 2I2RA 4YY8A 4B9KB 2P1OA 5A15A 3DCGB 2C9WC 4W9DB 3OGLA 3HVEA 3C6NA 5IBKA 3WSOB 2MA9C 2IF5A 4W9GB 1LQBB 1BUOA 2VPKA 5BXHA 5BXBA 4AJYC 4CXIA 4APFA 2YY9A 4W9EB 4ZOUA 4JTDB 2VKPA 1EODA 4B95B 4AWJB 3OGMA 2NN2A 4WQOC 3B84A 4I6JC 2P1QA 3HU6A 3HVEB 1VCBB 1S1GA 3LNMB 2FNJC 4W9JB 3V7DA 3ZUNB 4AP2A 2IHCA 2OVRA 5FTAA 1HV2A 2ASSA 1CS3A 4CP3A 1NEXA 5HYWB 3L2OA 4CXTA 1T1DA 3OGKA 2E31B 4U2MA 3E4UA 1FS1B 5EUPA 2OVPA 2A79B 4BKTB 4CXJA 3M52A 1R2BA 2P1MA 2P1NA 5H7GA 4JTAB 3KVTA 4EOZA 2PPIA 4U2NA 3LUTB 3DRZA 4W9FB 3M8VA 3ZNGB 3DRYA 2ASTA 3I3NA 3C6PA 4W9CB 5A6RA 1A68A 4N9F5 1NN7A 5HZGC 3OHVA 3ZRCB 3BIMA 1R28A 2JZ3C 4UIJA 3M5BA 4W9HB 1LDKD 3C6OA 3ZTDB 4W9IB 1EXBE 5H7HA 4BGCA 2P1PA 1EOFA 4U77A 5DAFA 4UYIA 1EOEA 4CRHA 4JTCB 4JGHC 3M4TA 5BO4C 5LLIB 2R9RB 1P22B 3HQIA 2Q81A 5BXDA 3HTMA 3MKSA 5JH5B 3FKCA 1FQVB 2OVQA 3ZRFB 4W9KB 4BKSB 2NZ0B 1QDWA 3LBZA 4HXIA 1DSXA 2IZVC 2Z8HA 5DADA 4J8ZA 4B9KE 1R29A 3GA1A 3DRXA 4ZGCA 1LM8C 1FS2B 4W9HH 3OHUA
chains in the Genus database with same CATH topology
4W9LB 2E32B 3ZKJB 3ZTCB 1QDVA 2I2RA 4YY8A 4B9KB 2P1OA 5A15A 3DCGB 2C9WC 4W9DB 3OGLA 3HVEA 3C6NA 5IBKA 3WSOB 2MA9C 2IF5A 4W9GB 1LQBB 1BUOA 2VPKA 5BXHA 5BXBA 4AJYC 4CXIA 4APFA 2YY9A 4W9EB 4ZOUA 4JTDB 2VKPA 1EODA 4B95B 4AWJB 3OGMA 2NN2A 4WQOC 3B84A 4I6JC 2P1QA 3HU6A 3HVEB 1VCBB 1S1GA 3LNMB 2FNJC 4W9JB 3V7DA 3ZUNB 4AP2A 2IHCA 2OVRA 5FTAA 1HV2A 2ASSA 1CS3A 4CP3A 1NEXA 5HYWB 3L2OA 4CXTA 1T1DA 3OGKA 2E31B 4U2MA 3E4UA 1FS1B 5EUPA 2OVPA 2A79B 4BKTB 4CXJA 3M52A 1R2BA 2P1MA 2P1NA 5H7GA 4JTAB 3KVTA 4EOZA 2PPIA 4U2NA 3LUTB 3DRZA 4W9FB 3M8VA 3ZNGB 3DRYA 2ASTA 3I3NA 3C6PA 4W9CB 5A6RA 1A68A 4N9F5 1NN7A 5HZGC 3OHVA 3ZRCB 3BIMA 1R28A 2JZ3C 4UIJA 3M5BA 4W9HB 1LDKD 3C6OA 3ZTDB 4W9IB 1EXBE 5H7HA 4BGCA 2P1PA 1EOFA 4U77A 5DAFA 4UYIA 1EOEA 4CRHA 4JTCB 4JGHC 3M4TA 5BO4C 5LLIB 2R9RB 1P22B 3HQIA 2Q81A 5BXDA 3HTMA 3MKSA 5JH5B 3FKCA 1FQVB 2OVQA 3ZRFB 4W9KB 4BKSB 2NZ0B 1QDWA 3LBZA 4HXIA 1DSXA 2IZVC 2Z8HA 5DADA 4J8ZA 4B9KE 1R29A 3GA1A 3DRXA 4ZGCA 1LM8C 1FS2B 4W9HH 3OHUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4W9L B;  2E32 B;  3ZKJ B;  3ZTC B;  1QDV A;  2I2R A;  4B9K B;  2P1O A;  5A15 A;  3DCG B;  2C9W C;  4W9D B;  3OGL A;  3HVE A;  3C6N A;  5IBK A;  3WSO B;  2MA9 C;  2IF5 A;  4W9G B;  1LQB B;  1BUO A;  2VPK A;  5BXH A;  5BXB A;  4AJY C;  4CXI A;  4APF A;  2YY9 A;  4W9E B;  4ZOU A;  4JTD B;  2VKP A;  1EOD A;  4B95 B;  4AWJ B;  3OGM A;  2NN2 A;  4WQO C;  3B84 A;  4I6J C;  2P1Q A;  3HU6 A;  3HVE B;  1VCB B;  1S1G A;  3LNM B;  2FNJ C;  4W9J B;  3V7D A;  3ZUN B;  4AP2 A;  2IHC A;  2OVR A;  5FTA A;  1HV2 A;  2ASS A;  1CS3 A;  4CP3 A;  1NEX A;  5HYW B;  3L2O A;  4CXT A;  1T1D A;  3OGK A;  2E31 B;  4U2M A;  3E4U A;  1FS1 B;  5EUP A;  2OVP A;  2A79 B;  4BKT B;  4CXJ A;  3M52 A;  1R2B A;  2P1M A;  2P1N A;  5H7G A;  4JTA B;  3KVT A;  4EOZ A;  2PPI A;  4U2N A;  3LUT B;  3DRZ A;  4W9F B;  3M8V A;  3ZNG B;  2AST A;  3I3N A;  3C6P A;  4W9C B;  5A6R A;  1A68 A;  4N9F 5;  1NN7 A;  5HZG C;  3OHV A;  3ZRC B;  3BIM A;  1R28 A;  2JZ3 C;  4UIJ A;  3M5B A;  4W9H B;  1LDK D;  3C6O A;  3ZTD B;  4W9I B;  1EXB E;  5H7H A;  4BGC A;  2P1P A;  1EOF A;  4U77 A;  5DAF A;  4UYI A;  1EOE A;  4CRH A;  4JTC B;  4JGH C;  3M4T A;  5BO4 C;  5LLI B;  2R9R B;  1P22 B;  3HQI A;  2Q81 A;  5BXD A;  3HTM A;  3MKS A;  5JH5 B;  3FKC A;  1FQV B;  2OVQ A;  3ZRF B;  4W9K B;  4BKS B;  2NZ0 B;  1QDW A;  3LBZ A;  4HXI A;  1DSX A;  2IZV C;  2Z8H A;  5DAD A;  4J8Z A;  4B9K E;  1R29 A;  3GA1 A;  1LM8 C;  1FS2 B;  4W9H H;  3OHU A; 
#chains in the Genus database with same CATH topology
 4W9L B;  2E32 B;  3ZKJ B;  3ZTC B;  1QDV A;  2I2R A;  4YY8 A;  4B9K B;  2P1O A;  5A15 A;  3DCG B;  2C9W C;  4W9D B;  3OGL A;  3HVE A;  3C6N A;  5IBK A;  3WSO B;  2MA9 C;  2IF5 A;  4W9G B;  1LQB B;  1BUO A;  2VPK A;  5BXH A;  5BXB A;  4AJY C;  4CXI A;  4APF A;  2YY9 A;  4W9E B;  4ZOU A;  4JTD B;  2VKP A;  1EOD A;  4B95 B;  4AWJ B;  3OGM A;  2NN2 A;  4WQO C;  3B84 A;  4I6J C;  2P1Q A;  3HU6 A;  3HVE B;  1VCB B;  1S1G A;  3LNM B;  2FNJ C;  4W9J B;  3V7D A;  3ZUN B;  4AP2 A;  2IHC A;  2OVR A;  5FTA A;  1HV2 A;  2ASS A;  1CS3 A;  4CP3 A;  1NEX A;  5HYW B;  3L2O A;  4CXT A;  1T1D A;  3OGK A;  2E31 B;  4U2M A;  3E4U A;  1FS1 B;  5EUP A;  2OVP A;  2A79 B;  4BKT B;  4CXJ A;  3M52 A;  1R2B A;  2P1M A;  2P1N A;  5H7G A;  4JTA B;  3KVT A;  4EOZ A;  2PPI A;  4U2N A;  3LUT B;  3DRZ A;  4W9F B;  3M8V A;  3ZNG B;  3DRY A;  2AST A;  3I3N A;  3C6P A;  4W9C B;  5A6R A;  1A68 A;  4N9F 5;  1NN7 A;  5HZG C;  3OHV A;  3ZRC B;  3BIM A;  1R28 A;  2JZ3 C;  4UIJ A;  3M5B A;  4W9H B;  1LDK D;  3C6O A;  3ZTD B;  4W9I B;  1EXB E;  5H7H A;  4BGC A;  2P1P A;  1EOF A;  4U77 A;  5DAF A;  4UYI A;  1EOE A;  4CRH A;  4JTC B;  4JGH C;  3M4T A;  5BO4 C;  5LLI B;  2R9R B;  1P22 B;  3HQI A;  2Q81 A;  5BXD A;  3HTM A;  3MKS A;  5JH5 B;  3FKC A;  1FQV B;  2OVQ A;  3ZRF B;  4W9K B;  4BKS B;  2NZ0 B;  1QDW A;  3LBZ A;  4HXI A;  1DSX A;  2IZV C;  2Z8H A;  5DAD A;  4J8Z A;  4B9K E;  1R29 A;  3GA1 A;  3DRX A;  4ZGC A;  1LM8 C;  1FS2 B;  4W9H H;  3OHU A; 
#chains in the Genus database with same CATH homology
 4W9L B;  2E32 B;  3ZKJ B;  3ZTC B;  1QDV A;  2I2R A;  4YY8 A;  4B9K B;  2P1O A;  5A15 A;  3DCG B;  2C9W C;  4W9D B;  3OGL A;  3HVE A;  3C6N A;  5IBK A;  3WSO B;  2MA9 C;  2IF5 A;  4W9G B;  1LQB B;  1BUO A;  2VPK A;  5BXH A;  5BXB A;  4AJY C;  4CXI A;  4APF A;  2YY9 A;  4W9E B;  4ZOU A;  4JTD B;  2VKP A;  1EOD A;  4B95 B;  4AWJ B;  3OGM A;  2NN2 A;  4WQO C;  3B84 A;  4I6J C;  2P1Q A;  3HU6 A;  3HVE B;  1VCB B;  1S1G A;  3LNM B;  2FNJ C;  4W9J B;  3V7D A;  3ZUN B;  4AP2 A;  2IHC A;  2OVR A;  5FTA A;  1HV2 A;  2ASS A;  1CS3 A;  4CP3 A;  1NEX A;  5HYW B;  3L2O A;  4CXT A;  1T1D A;  3OGK A;  2E31 B;  4U2M A;  3E4U A;  1FS1 B;  5EUP A;  2OVP A;  2A79 B;  4BKT B;  4CXJ A;  3M52 A;  1R2B A;  2P1M A;  2P1N A;  5H7G A;  4JTA B;  3KVT A;  4EOZ A;  2PPI A;  4U2N A;  3LUT B;  3DRZ A;  4W9F B;  3M8V A;  3ZNG B;  3DRY A;  2AST A;  3I3N A;  3C6P A;  4W9C B;  5A6R A;  1A68 A;  4N9F 5;  1NN7 A;  5HZG C;  3OHV A;  3ZRC B;  3BIM A;  1R28 A;  2JZ3 C;  4UIJ A;  3M5B A;  4W9H B;  1LDK D;  3C6O A;  3ZTD B;  4W9I B;  1EXB E;  5H7H A;  4BGC A;  2P1P A;  1EOF A;  4U77 A;  5DAF A;  4UYI A;  1EOE A;  4CRH A;  4JTC B;  4JGH C;  3M4T A;  5BO4 C;  5LLI B;  2R9R B;  1P22 B;  3HQI A;  2Q81 A;  5BXD A;  3HTM A;  3MKS A;  5JH5 B;  3FKC A;  1FQV B;  2OVQ A;  3ZRF B;  4W9K B;  4BKS B;  2NZ0 B;  1QDW A;  3LBZ A;  4HXI A;  1DSX A;  2IZV C;  2Z8H A;  5DAD A;  4J8Z A;  4B9K E;  1R29 A;  3GA1 A;  3DRX A;  4ZGC A;  1LM8 C;  1FS2 B;  4W9H H;  3OHU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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