5A7VB

The gh130 family of mannoside phosphorylases contains glycoside hydrolases that target beta-1,2 mannosidic linkages in candida mannan
Total Genus 92
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
92
sequence length
359
structure length
359
Chain Sequence
KKNVLPDWAFGGFERPQGANPVISPIENTKFYCPMTQDYVAWESNDTFNPAATLHDGKIVVLYRAEDKSGVGIGHRTSRLGYATSSDGIHFKREKTPVFYPDNDTQKKLEWPGGCEDPRIAVTAEGLYVMTYTQWNRHIPRLAIATSRNLKDWTKHGPAFAKAYDGKFFNLGCKSGSILTEVVNGKQVIKKIDGKYFMYWGEEHVFAATSEDLVNWTPYVNTDGSLRKLFSPRDGHFDSQLTECGPPAIYTPKGIVLLYNGKNSASRGDKRYTANVYAAGQALFDANDPTRFITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKVGMAIYNPKKPAAADPLPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Bacteroides thetaiotaomicron
publication title The Gh130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases that Target Beta-1,2 Mannosidic Linkages in Candida Mannan
pubmed doi rcsb
molecule keywords PUTATIVE GLYCOSIDASE PH117-RELATED
total genus 92
structure length 359
sequence length 359
ec nomenclature
pdb deposition date 2015-07-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF04041 Glyco_hydro_130 beta-1,4-mannooligosaccharide phosphorylase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 5a7vB00
4UDKE 3ZXLA 5AYEA 4KCBA 2X8FA 5GLQA 5JOXA 3D5ZA 3UGHA 3C7FA 4UDIA 5FKBA 1Y9MA 3WN2A 3ZXJA 4AK7A 5C0PA 3KSTA 5GLMA 4PVIA 3WPZA 2EXKA 1PT2A 3VSZA 3C7HA 5FMDA 3NQHA 5A8DA 4N2RA 3D5YA 5A7VA 3LEMA 3TAWA 3R67A 2QQVA 2YFRA 2YFTA 3OM2A 2QQWA 3D61A 4FFGA 5AYCA 5FKCA 3OM5A 5JOZA 2XQRA 3QZ4A 3PIJA 2ADEA 2AC1A 5B6TA 2QQUA 3BYNA 4AK6A 4KC7A 5FMCA 3WASA 3OM4A 3VSRA 1YI7A 5FK8A 3P2NA 3LV4A 1UV4A 3LF7A 4KCAA 3C2UA 4FFHA 1OYGA 1W2TA 3UGGA 2EXHA 3WMYA 5GLLA 3AKFA 3U14A 2OXBA 4O8PA 4QQSA 5A7VB 3R4ZA 1WL7A 4U6BA 3BYLA 5GLKA 3KF3A 5JOWA 4KMIA 3LIHA 4O8OA 3QEEA 3AKHA 3PIGA 3C7GA 3WPYA 3UGFA 3VT2A 3WN1A 2B4WA 2YFSA 5FMBA 4UDKA 3OM6A 4COTA 3LDRA 5GLOA 3QC2A 5A8CA 3RWKX 5JOYA 1W18A 2VDTA 1YIFA 4ONZA 5FIXA 3VT0A 3R4YA 4PVAA 5AY9A 3WATA 1UYPA 3QEDA 5AYDA 1YRZA 3WPUA 4KC8A 1GYHA 1Y4WA 3AKIA 4U6DA 2EXJA 2EXIA 4N1IA 5GLRA 3U75A 3WN0A 4N4BA 2AEZA 1ST8A 3SC7X 3BYKA 2X8TA 3WMZA 3ZXKA 4AK5A 4MLGA 4NOVA 4N2ZA 4O8NA 3LDKA 3K1UA 3VSSA 3VSFA 2AEYA 3WPVA 3CU9A 5FLWA 3BYJA 1VKDA 3C7EA 1GYEB 4EQVA 4D47A 3QEFA 4UDJA 5B6SA 5GLPA 3C7OA 3LFIA 5ANNA 5FK7A 2ADDA 2X8SA 3OM7A 3AKGA 4FFIA 3LIGA 1GYDB 4FFFA 3D60A 3WAUA 5GLNA 3VT1A 1Y7BA 4UDGA 3KF5A 1Y9GA
chains in the Genus database with same CATH superfamily
4UDKE 3ZXLA 5AYEA 4KCBA 2X8FA 5GLQA 5JOXA 3D5ZA 3UGHA 3C7FA 4UDIA 1Y9GA 5FKBA 1Y9MA 3WN2A 3ZXJA 4AK7A 5C0PA 3KSTA 5GLMA 1TL2A 4PVIA 3WPZA 2EXKA 1PT2A 3VSZA 3C7HA 5FMDA 3NQHA 5A8DA 4N2RA 3D5YA 5A7VA 3LEMA 3TAWA 3R67A 2QQVA 2YFRA 2YFTA 2QQWA 3OM2A 3D61A 4FFGA 5AYCA 5FKCA 3OM5A 5JOZA 2XQRA 3QZ4A 3PIJA 2ADEA 2AC1A 5B6TA 2QQUA 3BYNA 4AK6A 4KC7A 5FMCA 3WASA 3OM4A 3VSRA 1YI7A 5FK8A 3P2NA 3LV4A 1UV4A 3LF7A 4KCAA 3C2UA 4FFHA 1OYGA 1W2TA 3UGGA 2EXHA 3WMYA 5GLLA 3AKFA 3U14A 2OXBA 4O8PA 4QQSA 5A7VB 3R4ZA 1WL7A 4U6BA 3BYLA 5GLKA 3KF3A 5JOWA 4KMIA 3LIHA 4O8OA 3QEEA 3AKHA 3PIGA 3C7GA 3WPYA 3UGFA 5C2MA 3VT2A 3WN1A 2B4WA 2YFSA 5FMBA 4UDKA 3OM6A 4COTA 3LDRA 5GLOA 3QC2A 5A8CA 3RWKX 5JOYA 1W18A 2VDTA 1YIFA 4ONZA 5FIXA 3VT0A 3R4YA 4PVAA 5AY9A 3WATA 1UYPA 3QEDA 5AYDA 3WPUA 4KC8A 1GYHA 1Y4WA 3AKIA 4U6DA 2EXJA 2EXIA 4N1IA 5GLRA 3U75A 3WN0A 4N4BA 2AEZA 1ST8A 3SC7X 3BYKA 2X8TA 3WMZA 3ZXKA 4AK5A 4MLGA 4NOVA 4N2ZA 4O8NA 3LDKA 3K1UA 3VSSA 3VSFA 2AEYA 3WPVA 3CU9A 5FLWA 3BYJA 1VKDA 3C7EA 1GYEB 4EQVA 4D47A 3QEFA 4UDJA 5B6SA 5GLPA 3C7OA 3LFIA 5ANNA 5FK7A 2ADDA 2X8SA 3OM7A 3AKGA 4FFIA 3LIGA 1GYDB 4FFFA 3D60A 3WAUA 5GLNA 3VT1A 1Y7BA 4UDGA 3KF5A 1YRZA
chains in the Genus database with same CATH topology
4UDKE 3ZXLA 5AYEA 4KCBA 2X8FA 5GLQA 5JOXA 3D5ZA 3UGHA 3C7FA 4UDIA 5FKBA 1Y9MA 3WN2A 3ZXJA 4AK7A 5C0PA 3KSTA 5GLMA 4PVIA 3WPZA 2EXKA 1PT2A 3VSZA 3C7HA 5FMDA 3NQHA 5A8DA 4N2RA 3D5YA 5A7VA 3LEMA 3TAWA 3R67A 2QQVA 2YFRA 2YFTA 3OM2A 2QQWA 3D61A 4FFGA 5AYCA 5FKCA 3OM5A 5JOZA 2XQRA 3QZ4A 3PIJA 2ADEA 2AC1A 5B6TA 2QQUA 3BYNA 4AK6A 4KC7A 5FMCA 3WASA 3OM4A 3VSRA 1YI7A 5FK8A 3P2NA 3LV4A 1UV4A 3LF7A 4KCAA 3C2UA 4FFHA 1OYGA 1W2TA 3UGGA 2EXHA 3WMYA 5GLLA 3AKFA 3U14A 2OXBA 4O8PA 4QQSA 5A7VB 3R4ZA 1WL7A 4U6BA 3BYLA 5GLKA 3KF3A 5JOWA 4KMIA 3LIHA 4O8OA 3QEEA 3AKHA 3PIGA 3C7GA 3WPYA 3UGFA 3VT2A 3WN1A 2B4WA 2YFSA 5FMBA 4UDKA 3OM6A 4COTA 3LDRA 5GLOA 3QC2A 5A8CA 3RWKX 5JOYA 1W18A 2VDTA 1YIFA 4ONZA 5FIXA 3VT0A 3R4YA 4PVAA 5AY9A 3WATA 1UYPA 3QEDA 5AYDA 1YRZA 3WPUA 4KC8A 1GYHA 1Y4WA 3AKIA 4U6DA 2EXJA 2EXIA 4N1IA 5GLRA 3U75A 3WN0A 4N4BA 2AEZA 1ST8A 3SC7X 3BYKA 2X8TA 3WMZA 3ZXKA 4AK5A 4MLGA 4NOVA 4N2ZA 4O8NA 3LDKA 3K1UA 3VSSA 3VSFA 2AEYA 3WPVA 3CU9A 5FLWA 3BYJA 1VKDA 3C7EA 1GYEB 4EQVA 4D47A 3QEFA 4UDJA 5B6SA 5GLPA 3C7OA 3LFIA 5ANNA 5FK7A 2ADDA 2X8SA 3OM7A 3AKGA 4FFIA 3LIGA 1GYDB 4FFFA 3D60A 3WAUA 5GLNA 3VT1A 1Y7BA 4UDGA 3KF5A 1Y9GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UDK E;  3ZXL A;  5AYE A;  4KCB A;  2X8F A;  5GLQ A;  5JOX A;  3D5Z A;  3UGH A;  3C7F A;  4UDI A;  5FKB A;  1Y9M A;  3WN2 A;  3ZXJ A;  4AK7 A;  5C0P A;  3KST A;  5GLM A;  4PVI A;  3WPZ A;  2EXK A;  1PT2 A;  3VSZ A;  3C7H A;  5FMD A;  3NQH A;  5A8D A;  4N2R A;  3D5Y A;  5A7V A;  3LEM A;  3TAW A;  3R67 A;  2QQV A;  2YFR A;  2YFT A;  3OM2 A;  2QQW A;  3D61 A;  4FFG A;  5AYC A;  5FKC A;  3OM5 A;  5JOZ A;  2XQR A;  3QZ4 A;  3PIJ A;  2ADE A;  2AC1 A;  5B6T A;  2QQU A;  3BYN A;  4AK6 A;  4KC7 A;  5FMC A;  3WAS A;  3OM4 A;  3VSR A;  1YI7 A;  5FK8 A;  3P2N A;  3LV4 A;  1UV4 A;  3LF7 A;  4KCA A;  3C2U A;  4FFH A;  1OYG A;  1W2T A;  3UGG A;  2EXH A;  3WMY A;  5GLL A;  3AKF A;  3U14 A;  2OXB A;  4O8P A;  4QQS A;  5A7V B;  3R4Z A;  1WL7 A;  4U6B A;  3BYL A;  5GLK A;  3KF3 A;  5JOW A;  4KMI A;  3LIH A;  4O8O A;  3QEE A;  3AKH A;  3PIG A;  3C7G A;  3WPY A;  3UGF A;  3VT2 A;  3WN1 A;  2B4W A;  2YFS A;  5FMB A;  4UDK A;  3OM6 A;  4COT A;  3LDR A;  5GLO A;  3QC2 A;  5A8C A;  3RWK X;  5JOY A;  1W18 A;  2VDT A;  1YIF A;  4ONZ A;  5FIX A;  3VT0 A;  3R4Y A;  4PVA A;  5AY9 A;  3WAT A;  1UYP A;  3QED A;  5AYD A;  1YRZ A;  3WPU A;  4KC8 A;  1GYH A;  1Y4W A;  3AKI A;  4U6D A;  2EXJ A;  2EXI A;  4N1I A;  5GLR A;  3U75 A;  3WN0 A;  4N4B A;  2AEZ A;  1ST8 A;  3SC7 X;  3BYK A;  2X8T A;  3WMZ A;  3ZXK A;  4AK5 A;  4MLG A;  4NOV A;  4N2Z A;  4O8N A;  3LDK A;  3K1U A;  3VSS A;  3VSF A;  2AEY A;  3WPV A;  3CU9 A;  5FLW A;  3BYJ A;  1VKD A;  3C7E A;  1GYE B;  4EQV A;  4D47 A;  3QEF A;  4UDJ A;  5B6S A;  5GLP A;  3C7O A;  3LFI A;  5ANN A;  5FK7 A;  2ADD A;  2X8S A;  3OM7 A;  3AKG A;  4FFI A;  3LIG A;  1GYD B;  4FFF A;  3D60 A;  3WAU A;  5GLN A;  3VT1 A;  1Y7B A;  4UDG A;  3KF5 A;  1Y9G A; 
#chains in the Genus database with same CATH topology
 4UDK E;  3ZXL A;  5AYE A;  4KCB A;  2X8F A;  5GLQ A;  5JOX A;  3D5Z A;  3UGH A;  3C7F A;  4UDI A;  1Y9G A;  5FKB A;  1Y9M A;  3WN2 A;  3ZXJ A;  4AK7 A;  5C0P A;  3KST A;  5GLM A;  1TL2 A;  4PVI A;  3WPZ A;  2EXK A;  1PT2 A;  3VSZ A;  3C7H A;  5FMD A;  3NQH A;  5A8D A;  4N2R A;  3D5Y A;  5A7V A;  3LEM A;  3TAW A;  3R67 A;  2QQV A;  2YFR A;  2YFT A;  2QQW A;  3OM2 A;  3D61 A;  4FFG A;  5AYC A;  5FKC A;  3OM5 A;  5JOZ A;  2XQR A;  3QZ4 A;  3PIJ A;  2ADE A;  2AC1 A;  5B6T A;  2QQU A;  3BYN A;  4AK6 A;  4KC7 A;  5FMC A;  3WAS A;  3OM4 A;  3VSR A;  1YI7 A;  5FK8 A;  3P2N A;  3LV4 A;  1UV4 A;  3LF7 A;  4KCA A;  3C2U A;  4FFH A;  1OYG A;  1W2T A;  3UGG A;  2EXH A;  3WMY A;  5GLL A;  3AKF A;  3U14 A;  2OXB A;  4O8P A;  4QQS A;  5A7V B;  3R4Z A;  1WL7 A;  4U6B A;  3BYL A;  5GLK A;  3KF3 A;  5JOW A;  4KMI A;  3LIH A;  4O8O A;  3QEE A;  3AKH A;  3PIG A;  3C7G A;  3WPY A;  3UGF A;  5C2M A;  3VT2 A;  3WN1 A;  2B4W A;  2YFS A;  5FMB A;  4UDK A;  3OM6 A;  4COT A;  3LDR A;  5GLO A;  3QC2 A;  5A8C A;  3RWK X;  5JOY A;  1W18 A;  2VDT A;  1YIF A;  4ONZ A;  5FIX A;  3VT0 A;  3R4Y A;  4PVA A;  5AY9 A;  3WAT A;  1UYP A;  3QED A;  5AYD A;  3WPU A;  4KC8 A;  1GYH A;  1Y4W A;  3AKI A;  4U6D A;  2EXJ A;  2EXI A;  4N1I A;  5GLR A;  3U75 A;  3WN0 A;  4N4B A;  2AEZ A;  1ST8 A;  3SC7 X;  3BYK A;  2X8T A;  3WMZ A;  3ZXK A;  4AK5 A;  4MLG A;  4NOV A;  4N2Z A;  4O8N A;  3LDK A;  3K1U A;  3VSS A;  3VSF A;  2AEY A;  3WPV A;  3CU9 A;  5FLW A;  3BYJ A;  1VKD A;  3C7E A;  1GYE B;  4EQV A;  4D47 A;  3QEF A;  4UDJ A;  5B6S A;  5GLP A;  3C7O A;  3LFI A;  5ANN A;  5FK7 A;  2ADD A;  2X8S A;  3OM7 A;  3AKG A;  4FFI A;  3LIG A;  1GYD B;  4FFF A;  3D60 A;  3WAU A;  5GLN A;  3VT1 A;  1Y7B A;  4UDG A;  3KF5 A;  1YRZ A; 
#chains in the Genus database with same CATH homology
 4UDK E;  3ZXL A;  5AYE A;  4KCB A;  2X8F A;  5GLQ A;  5JOX A;  3D5Z A;  3UGH A;  3C7F A;  4UDI A;  5FKB A;  1Y9M A;  3WN2 A;  3ZXJ A;  4AK7 A;  5C0P A;  3KST A;  5GLM A;  4PVI A;  3WPZ A;  2EXK A;  1PT2 A;  3VSZ A;  3C7H A;  5FMD A;  3NQH A;  5A8D A;  4N2R A;  3D5Y A;  5A7V A;  3LEM A;  3TAW A;  3R67 A;  2QQV A;  2YFR A;  2YFT A;  3OM2 A;  2QQW A;  3D61 A;  4FFG A;  5AYC A;  5FKC A;  3OM5 A;  5JOZ A;  2XQR A;  3QZ4 A;  3PIJ A;  2ADE A;  2AC1 A;  5B6T A;  2QQU A;  3BYN A;  4AK6 A;  4KC7 A;  5FMC A;  3WAS A;  3OM4 A;  3VSR A;  1YI7 A;  5FK8 A;  3P2N A;  3LV4 A;  1UV4 A;  3LF7 A;  4KCA A;  3C2U A;  4FFH A;  1OYG A;  1W2T A;  3UGG A;  2EXH A;  3WMY A;  5GLL A;  3AKF A;  3U14 A;  2OXB A;  4O8P A;  4QQS A;  5A7V B;  3R4Z A;  1WL7 A;  4U6B A;  3BYL A;  5GLK A;  3KF3 A;  5JOW A;  4KMI A;  3LIH A;  4O8O A;  3QEE A;  3AKH A;  3PIG A;  3C7G A;  3WPY A;  3UGF A;  3VT2 A;  3WN1 A;  2B4W A;  2YFS A;  5FMB A;  4UDK A;  3OM6 A;  4COT A;  3LDR A;  5GLO A;  3QC2 A;  5A8C A;  3RWK X;  5JOY A;  1W18 A;  2VDT A;  1YIF A;  4ONZ A;  5FIX A;  3VT0 A;  3R4Y A;  4PVA A;  5AY9 A;  3WAT A;  1UYP A;  3QED A;  5AYD A;  1YRZ A;  3WPU A;  4KC8 A;  1GYH A;  1Y4W A;  3AKI A;  4U6D A;  2EXJ A;  2EXI A;  4N1I A;  5GLR A;  3U75 A;  3WN0 A;  4N4B A;  2AEZ A;  1ST8 A;  3SC7 X;  3BYK A;  2X8T A;  3WMZ A;  3ZXK A;  4AK5 A;  4MLG A;  4NOV A;  4N2Z A;  4O8N A;  3LDK A;  3K1U A;  3VSS A;  3VSF A;  2AEY A;  3WPV A;  3CU9 A;  5FLW A;  3BYJ A;  1VKD A;  3C7E A;  1GYE B;  4EQV A;  4D47 A;  3QEF A;  4UDJ A;  5B6S A;  5GLP A;  3C7O A;  3LFI A;  5ANN A;  5FK7 A;  2ADD A;  2X8S A;  3OM7 A;  3AKG A;  4FFI A;  3LIG A;  1GYD B;  4FFF A;  3D60 A;  3WAU A;  5GLN A;  3VT1 A;  1Y7B A;  4UDG A;  3KF5 A;  1Y9G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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