5B5VA

Structure of full-length mob1b
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
192
structure length
187
Chain Sequence
PEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
molecule keywords MOB kinase activator 1B
publication title Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
pubmed doi rcsb
source organism Mus musculus
total genus 64
structure length 187
sequence length 192
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2016-05-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03637 Mob1_phocein Mob1/phocein family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.30 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 MOB kinase activator 5b5vA00
4LQQB 5BRMA 1R3BA 5B5WA 2HJNA 4LQSB 5B5VA 5B6BA 4JIZA 4J1VA 1PI1A 5BRKA
chains in the Genus database with same CATH superfamily
4M9AA 2BU2A 4FF3A 1K90A 2R03A 4P13A 4JIOA 3RKHA 3N0RA 4ZYJA 3D9FA 4LQSB 1XFXA 2XS1A 4J1VA 4JIZA 4X28A 5M4KA 4W9UA 2RFQA 2OR0A 3OIBA 3BNFA 1SK6A 5M4NA 2YYGA 2F6LA 2OEXA 3P4TA 3CRLA 4IRNA 4F0XA 5K3GA 2HJNA 2PG0A 1SIQA 4MPNA 2EBFX 2QR4A 3TZ0A 2PO4A 4KSFA 3SCEA 2GBBA 2FONA 2ZDXA 3MDDA 1EGDA 4QICA 4MPCA 2D29A 4Q5CA 4U83A 4MPEA 1LVCA 3AFFA 4V26A 3EOMA 3MKHA 3HWCA 4H85A 2FP2A 3CE2A 3X0YA 5B6BA 3AFEA 3Q24A 4FF4A 1K8TA 1RJ1A 1T9GA 2A1TA 2YYLA 4E00A 1WS9A 4AKHA 4FZ4A 2WBIA 5BRMA 4JEKA 1SIRA 3EONA 2DDHA 1GKXA 2AZEA 2BU8A 1PI1A 2E81A 1UDYA 1U8VA 2RDZA 1FS9A 2CJ7A 3TZ2A 3C3LA 1PK0A 2C0UA 4IV6A 4L3ZA 4RM7A 2Q8FA 1UKWA 2Q8GA 3D9EA 2CJ6A 5M4MA 3VKGA 3MDEA 2FP1A 1XFYA 4O5MA 3VADA 4Q1OA 4E01A 2BU7A 4AI6A 2C12A 3PFDA 1BUCA 5K3IA 3MMOA 3UU9A 2JBTA 3LGQA 1XFWA 2YYKA 4KSAA 2R0MA 2CJ8A 3Q22A 2LFWA 1Y8PA 3OWAA 1IVHA 4HKSA 2BU5A 2YGWA 4H7QA 4L3XA 3CRKA 2PNRA 1R3BA 4G5EA 5B5WA 3Q23A 4L3YA 2JBRA 1FS7A 4HR3A 1JQIA 5M4PA 4AKGA 1QDBA 3D2RA 5GJVE 1Y0VA 3M9VA 1IS2A 2VR0A 1X91A 4NXLA 3D6BA 4Q4UA 3F29A 2BU6A 3R7KA 1EGCA 4KTOA 1FS8A 2JBSA 3B96A 4G97A 3BNHA 2AO2A 4MP7A 3C46A 5B5VA 2Q8HA 3C2PA 2EC5A 3D1IA 3TZ4A 2EBHX 3TORA 2OEVA 5K3JA 2YYMA 3FO3A 4Q17A 4E02A 1X90A 3L1TA 1RP3A 2Z1QA 3LG1A 2XS8A 2EBAA 4H81A 1Y8OA 4L1FA 3SF6A 1GKZA 3SXQA 2ZKJA 2CX9A 4ZXVA 1W07A 4N5FA 5GJWE 3TTBA 5BRKA 2JIFA 3FCJA 4P79A 3Q0AA 1K93A 3GQTA 1Y8NA 1XG2B 2BTZA 1R2JA 3NF4A 1OAHA 2UXWA 4KCFA 3SWOA 4KS9A 2Q8IA 2REHA 1XFZA 2OT4A 4FF1A 3TZ5A 2ZAFA 2E0AA 1X8ZA 3S7WA 1XFUA 2IX5A 4V25A 2VF1A 4FF2A 2ZDYA 4DZYA 2RF7A 2E80A 2R02A 1RJ4A 1RX0A 4DOYA 4XVXA 2OJQA 3BNJA 3BNGA 3D9GA 4AKIA 3D9DA 2R0NA 2DVLA 2XQRB 2VIGA 2ZO5A 4WJYA 4LQQB 3GNCA 3UBRA 2IX6A 2CJ5A 2J7AA 2YYIA 3MPIA 1JM6A 1GJVA 1SC5A 3GM6A 5J6AA 3KMLA 2R05A 3II9A 4Q5BA 4HKRA 3MPJA 1XFVA 1S26A 2CJ4A 4L38A 5K3HA 3X29A 3MXLA 4OO2A 5J71A 3OWMA 4Q0TA 3VKHA 4MP2A 1EGEA 2YYJA 1GU6A 3X0XA 4X28C
chains in the Genus database with same CATH topology
4LQQB 5BRMA 1R3BA 5B5WA 2HJNA 4LQSB 5B5VA 5B6BA 4JIZA 4J1VA 1PI1A 5BRKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4LQQ B;  5BRM A;  1R3B A;  5B5W A;  2HJN A;  4LQS B;  5B5V A;  5B6B A;  4JIZ A;  4J1V A;  1PI1 A;  5BRK A; 
#chains in the Genus database with same CATH topology
 4M9A A;  2BU2 A;  4FF3 A;  1K90 A;  2R03 A;  4P13 A;  4JIO A;  3RKH A;  3N0R A;  4ZYJ A;  3D9F A;  4LQS B;  1XFX A;  2XS1 A;  4J1V A;  4JIZ A;  4X28 A;  5M4K A;  4W9U A;  2RFQ A;  2OR0 A;  3OIB A;  3BNF A;  1SK6 A;  5M4N A;  2YYG A;  2F6L A;  2OEX A;  3P4T A;  3CRL A;  4IRN A;  4F0X A;  5K3G A;  2HJN A;  2PG0 A;  1SIQ A;  4MPN A;  2EBF X;  2QR4 A;  3TZ0 A;  2PO4 A;  4KSF A;  3SCE A;  2GBB A;  2FON A;  2ZDX A;  3MDD A;  1EGD A;  4QIC A;  4MPC A;  2D29 A;  4Q5C A;  4U83 A;  4MPE A;  1LVC A;  3AFF A;  4V26 A;  3EOM A;  3MKH A;  3HWC A;  4H85 A;  2FP2 A;  3CE2 A;  3X0Y A;  5B6B A;  3AFE A;  3Q24 A;  4FF4 A;  1K8T A;  1RJ1 A;  1T9G A;  2A1T A;  2YYL A;  4E00 A;  1WS9 A;  4AKH A;  4FZ4 A;  2WBI A;  5BRM A;  4JEK A;  1SIR A;  3EON A;  2DDH A;  1GKX A;  2AZE A;  2BU8 A;  1PI1 A;  2E81 A;  1UDY A;  1U8V A;  2RDZ A;  1FS9 A;  2CJ7 A;  3TZ2 A;  3C3L A;  1PK0 A;  2C0U A;  4IV6 A;  4L3Z A;  4RM7 A;  2Q8F A;  1UKW A;  2Q8G A;  3D9E A;  2CJ6 A;  5M4M A;  3VKG A;  3MDE A;  2FP1 A;  1XFY A;  4O5M A;  3VAD A;  4Q1O A;  4E01 A;  2BU7 A;  4AI6 A;  2C12 A;  3PFD A;  1BUC A;  5K3I A;  3MMO A;  3UU9 A;  2JBT A;  3LGQ A;  1XFW A;  2YYK A;  4KSA A;  2R0M A;  2CJ8 A;  3Q22 A;  2LFW A;  1Y8P A;  3OWA A;  1IVH A;  4HKS A;  2BU5 A;  2YGW A;  4H7Q A;  4L3X A;  3CRK A;  2PNR A;  1R3B A;  4G5E A;  5B5W A;  3Q23 A;  4L3Y A;  2JBR A;  1FS7 A;  4HR3 A;  1JQI A;  5M4P A;  4AKG A;  1QDB A;  3D2R A;  5GJV E;  1Y0V A;  3M9V A;  1IS2 A;  2VR0 A;  1X91 A;  4NXL A;  3D6B A;  4Q4U A;  3F29 A;  2BU6 A;  3R7K A;  1EGC A;  4KTO A;  1FS8 A;  2JBS A;  3B96 A;  4G97 A;  3BNH A;  2AO2 A;  4MP7 A;  3C46 A;  5B5V A;  2Q8H A;  3C2P A;  2EC5 A;  3D1I A;  3TZ4 A;  2EBH X;  3TOR A;  2OEV A;  5K3J A;  2YYM A;  3FO3 A;  4Q17 A;  4E02 A;  1X90 A;  3L1T A;  1RP3 A;  2Z1Q A;  3LG1 A;  2XS8 A;  2EBA A;  4H81 A;  1Y8O A;  4L1F A;  3SF6 A;  1GKZ A;  3SXQ A;  2ZKJ A;  2CX9 A;  4ZXV A;  1W07 A;  4N5F A;  5GJW E;  3TTB A;  5BRK A;  2JIF A;  3FCJ A;  4P79 A;  3Q0A A;  1K93 A;  3GQT A;  1Y8N A;  1XG2 B;  2BTZ A;  1R2J A;  3NF4 A;  1OAH A;  2UXW A;  4KCF A;  3SWO A;  4KS9 A;  2Q8I A;  2REH A;  1XFZ A;  2OT4 A;  4FF1 A;  3TZ5 A;  2ZAF A;  2E0A A;  1X8Z A;  3S7W A;  1XFU A;  2IX5 A;  4V25 A;  2VF1 A;  4FF2 A;  2ZDY A;  4DZY A;  2RF7 A;  2E80 A;  2R02 A;  1RJ4 A;  1RX0 A;  4DOY A;  4XVX A;  2OJQ A;  3BNJ A;  3BNG A;  3D9G A;  4AKI A;  3D9D A;  2R0N A;  2DVL A;  2XQR B;  2VIG A;  2ZO5 A;  4WJY A;  4LQQ B;  3GNC A;  3UBR A;  2IX6 A;  2CJ5 A;  2J7A A;  2YYI A;  3MPI A;  1JM6 A;  1GJV A;  1SC5 A;  3GM6 A;  5J6A A;  3KML A;  2R05 A;  3II9 A;  4Q5B A;  4HKR A;  3MPJ A;  1XFV A;  1S26 A;  2CJ4 A;  4L38 A;  5K3H A;  3X29 A;  3MXL A;  4OO2 A;  5J71 A;  3OWM A;  4Q0T A;  3VKH A;  4MP2 A;  1EGE A;  2YYJ A;  1GU6 A;  3X0X A;  4X28 C; 
#chains in the Genus database with same CATH homology
 4LQQ B;  5BRM A;  1R3B A;  5B5W A;  2HJN A;  4LQS B;  5B5V A;  5B6B A;  4JIZ A;  4J1V A;  1PI1 A;  5BRK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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