5BTVA

Crystal structure of human 14-3-3 sigma in complex with a tau-protein peptide surrounding ps324
Total Genus 101
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
101
sequence length
235
structure length
227
Chain Sequence
AMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSEERNLLSVAYKNVVGGQRAAWRVLSSIEQCSNGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Structural protein
molecule keywords 14-3-3 protein sigma
publication title Involvement of 14-3-3 in tubulin instability and impaired axon development is mediated by Tau.
pubmed doi rcsb
source organism Homo sapiens
total genus 101
structure length 227
sequence length 235
ec nomenclature
pdb deposition date 2015-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 5btvA00
4ZDRA 4HKCA 4QLIA 2C74A 4Y3BA 3SMMA 3UALA 5D3EA 4DX0A 4DATA 3P1NA 4DHQA 3M50A 3SMKA 5LHOA 4DHNA 4DHOA 3LW1A 5BY9A 2BQ0A 4E2EA 3SMNA 3SP5A 4J6SA 4DHMA 3M51A 5BTVA 4IHLA 5F74A 1QJAA 4DHTA 4DHUA 1O9DA 1YZ5A 3UBWA 1O9CA 3CU8A 5D3FA 3UZDA 4N7YA 2BR9A 4FR3A 4JC3A 5LVZA 4BG6A 1O9FA 4O46A 3P1PA 3O8IA 5D2DA 3E6YA 3AXYC 2C23A 3RDHA 4DHPA 1YWTA 4DHSA 4IEAA 2V7DA 3P1SA 4F7RA 2O8PA 5EXAA 4Y32A 5EWZA 2NPMA 1O9EA 2C1JA 2C63A 5IQPA 5LU1A 5HF3A 2O98A 4WRQA 4JDDA 5LU2A 3IQVA 1A37A 5LX2A 3SPRA 5J31A 1A38A 3IQJA 3EFZA 4ZQ0A 3SMOA 1IB1A 4FL5A 4DNKA 3T0MA 1A4OA 3P1RA 4GNTA 3SMLA 3NKXA 3P1OA 3UX0A 4DHRA 4Y5IA 3IQUA 2C1NA 3P1QA 2BTPA 4N7GA 2B05A 4DAUA 4N84A 3U9XA 3MHRA 1QJBA 4FJ3A 3T0LA 2WH0A 2O02A
chains in the Genus database with same CATH superfamily
4ZDRA 4HKCA 4QLIA 2C74A 3CQCA 4Y3BA 3SMMA 3UALA 5D3EA 4DX0A 4DATA 4D8MA 2C9KA 4W8JA 3P1NA 4DHQA 3M50A 3SMKA 5LHOA 4DHNA 3CQGA 4DHOA 3LW1A 5BY9A 2BQ0A 4E2EA 3SMNA 3SP5A 4QX3A 4J6SA 4DHMA 3I4RA 1URJA 3M51A 4MOAA 5BTVA 4IHLA 5F74A 1QJAA 4ARXA 4DHTA 4DHUA 1O9DA 1YZ5A 3UBWA 1O9CA 3CU8A 5D3FA 3UZDA 4N7YA 2BR9A 4FR3A 4JC3A 3X0UA 5LVZA 4BG6A 1O9FA 4O46A 3P1PA 3O8IA 5D2DA 3E6YA 3AXYC 2C23A 3RDHA 4DHPA 1YWTA 4DHSA 4IEAA 2V7DA 1CIYA 3P1SA 4F7RA 2O8PA 3EB7A 1JI6A 5EXAA 4QX1A 4Y32A 5EWZA 2NPMA 1O9EA 2C1JA 2C63A 5IQPA 5LU1A 5HF3A 4ARYA 2O98A 1S2XA 4WRQA 4JDDA 5LU2A 3IQVA 1A37A 5LX2A 3SPRA 1W99A 5J31A 1A38A 3IQJA 1DLCA 3EFZA 4ZQ0A 3SMOA 1IB1A 4FL5A 4DNKA 3T0MA 1A4OA 3P1RA 4GNTA 3SMLA 4QX0A 3NKXA 3P1OA 3UX0A 4QX2A 4DHRA 4Y5IA 3IQUA 2C1NA 3P1QA 2BTPA 4N7GA 2B05A 4DAUA 4N84A 3U9XA 3MHRA 1QJBA 1I5PA 4FJ3A 3T0LA 3ZHEB 2WH0A 2O02A
chains in the Genus database with same CATH topology
4ZDRA 4HKCA 4QLIA 2C74A 4Y3BA 3SMMA 3UALA 5D3EA 4DX0A 4DATA 3P1NA 4DHQA 3M50A 3SMKA 5LHOA 4DHNA 4DHOA 3LW1A 5BY9A 2BQ0A 4E2EA 3SMNA 3SP5A 4J6SA 4DHMA 3M51A 5BTVA 4IHLA 5F74A 1QJAA 4DHTA 4DHUA 1O9DA 1YZ5A 3UBWA 1O9CA 3CU8A 5D3FA 3UZDA 4N7YA 2BR9A 4FR3A 4JC3A 5LVZA 4BG6A 1O9FA 4O46A 3P1PA 3O8IA 5D2DA 3E6YA 3AXYC 2C23A 3RDHA 4DHPA 1YWTA 4DHSA 4IEAA 2V7DA 3P1SA 4F7RA 2O8PA 5EXAA 4Y32A 5EWZA 2NPMA 1O9EA 2C1JA 2C63A 5IQPA 5LU1A 5HF3A 2O98A 4WRQA 4JDDA 5LU2A 3IQVA 1A37A 5LX2A 3SPRA 5J31A 1A38A 3IQJA 3EFZA 4ZQ0A 3SMOA 1IB1A 4FL5A 4DNKA 3T0MA 1A4OA 3P1RA 4GNTA 3SMLA 3NKXA 3P1OA 3UX0A 4DHRA 4Y5IA 3IQUA 2C1NA 3P1QA 2BTPA 4N7GA 2B05A 4DAUA 4N84A 3U9XA 3MHRA 1QJBA 4FJ3A 3T0LA 2WH0A 2O02A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZDR A;  4HKC A;  4QLI A;  2C74 A;  4Y3B A;  3SMM A;  3UAL A;  5D3E A;  4DX0 A;  4DAT A;  3P1N A;  4DHQ A;  3M50 A;  3SMK A;  5LHO A;  4DHN A;  4DHO A;  3LW1 A;  5BY9 A;  2BQ0 A;  4E2E A;  3SMN A;  3SP5 A;  4J6S A;  4DHM A;  3M51 A;  5BTV A;  4IHL A;  5F74 A;  1QJA A;  4DHT A;  4DHU A;  1O9D A;  1YZ5 A;  3UBW A;  1O9C A;  3CU8 A;  5D3F A;  3UZD A;  4N7Y A;  2BR9 A;  4FR3 A;  4JC3 A;  5LVZ A;  4BG6 A;  1O9F A;  4O46 A;  3P1P A;  3O8I A;  5D2D A;  3E6Y A;  3AXY C;  2C23 A;  3RDH A;  4DHP A;  1YWT A;  4DHS A;  4IEA A;  2V7D A;  3P1S A;  4F7R A;  2O8P A;  5EXA A;  4Y32 A;  5EWZ A;  2NPM A;  1O9E A;  2C1J A;  2C63 A;  5IQP A;  5LU1 A;  5HF3 A;  2O98 A;  4WRQ A;  4JDD A;  5LU2 A;  3IQV A;  1A37 A;  5LX2 A;  3SPR A;  5J31 A;  1A38 A;  3IQJ A;  3EFZ A;  4ZQ0 A;  3SMO A;  1IB1 A;  4FL5 A;  4DNK A;  3T0M A;  1A4O A;  3P1R A;  4GNT A;  3SML A;  3NKX A;  3P1O A;  3UX0 A;  4DHR A;  4Y5I A;  3IQU A;  2C1N A;  3P1Q A;  2BTP A;  4N7G A;  2B05 A;  4DAU A;  4N84 A;  3U9X A;  3MHR A;  1QJB A;  4FJ3 A;  3T0L A;  2WH0 A;  2O02 A; 
#chains in the Genus database with same CATH topology
 4ZDR A;  4HKC A;  4QLI A;  2C74 A;  3CQC A;  4Y3B A;  3SMM A;  3UAL A;  5D3E A;  4DX0 A;  4DAT A;  4D8M A;  2C9K A;  4W8J A;  3P1N A;  4DHQ A;  3M50 A;  3SMK A;  5LHO A;  4DHN A;  3CQG A;  4DHO A;  3LW1 A;  5BY9 A;  2BQ0 A;  4E2E A;  3SMN A;  3SP5 A;  4QX3 A;  4J6S A;  4DHM A;  3I4R A;  1URJ A;  3M51 A;  4MOA A;  5BTV A;  4IHL A;  5F74 A;  1QJA A;  4ARX A;  4DHT A;  4DHU A;  1O9D A;  1YZ5 A;  3UBW A;  1O9C A;  3CU8 A;  5D3F A;  3UZD A;  4N7Y A;  2BR9 A;  4FR3 A;  4JC3 A;  3X0U A;  5LVZ A;  4BG6 A;  1O9F A;  4O46 A;  3P1P A;  3O8I A;  5D2D A;  3E6Y A;  3AXY C;  2C23 A;  3RDH A;  4DHP A;  1YWT A;  4DHS A;  4IEA A;  2V7D A;  1CIY A;  3P1S A;  4F7R A;  2O8P A;  3EB7 A;  1JI6 A;  5EXA A;  4QX1 A;  4Y32 A;  5EWZ A;  2NPM A;  1O9E A;  2C1J A;  2C63 A;  5IQP A;  5LU1 A;  5HF3 A;  4ARY A;  2O98 A;  1S2X A;  4WRQ A;  4JDD A;  5LU2 A;  3IQV A;  1A37 A;  5LX2 A;  3SPR A;  1W99 A;  5J31 A;  1A38 A;  3IQJ A;  1DLC A;  3EFZ A;  4ZQ0 A;  3SMO A;  1IB1 A;  4FL5 A;  4DNK A;  3T0M A;  1A4O A;  3P1R A;  4GNT A;  3SML A;  4QX0 A;  3NKX A;  3P1O A;  3UX0 A;  4QX2 A;  4DHR A;  4Y5I A;  3IQU A;  2C1N A;  3P1Q A;  2BTP A;  4N7G A;  2B05 A;  4DAU A;  4N84 A;  3U9X A;  3MHR A;  1QJB A;  1I5P A;  4FJ3 A;  3T0L A;  3ZHE B;  2WH0 A;  2O02 A; 
#chains in the Genus database with same CATH homology
 4ZDR A;  4HKC A;  4QLI A;  2C74 A;  4Y3B A;  3SMM A;  3UAL A;  5D3E A;  4DX0 A;  4DAT A;  3P1N A;  4DHQ A;  3M50 A;  3SMK A;  5LHO A;  4DHN A;  4DHO A;  3LW1 A;  5BY9 A;  2BQ0 A;  4E2E A;  3SMN A;  3SP5 A;  4J6S A;  4DHM A;  3M51 A;  5BTV A;  4IHL A;  5F74 A;  1QJA A;  4DHT A;  4DHU A;  1O9D A;  1YZ5 A;  3UBW A;  1O9C A;  3CU8 A;  5D3F A;  3UZD A;  4N7Y A;  2BR9 A;  4FR3 A;  4JC3 A;  5LVZ A;  4BG6 A;  1O9F A;  4O46 A;  3P1P A;  3O8I A;  5D2D A;  3E6Y A;  3AXY C;  2C23 A;  3RDH A;  4DHP A;  1YWT A;  4DHS A;  4IEA A;  2V7D A;  3P1S A;  4F7R A;  2O8P A;  5EXA A;  4Y32 A;  5EWZ A;  2NPM A;  1O9E A;  2C1J A;  2C63 A;  5IQP A;  5LU1 A;  5HF3 A;  2O98 A;  4WRQ A;  4JDD A;  5LU2 A;  3IQV A;  1A37 A;  5LX2 A;  3SPR A;  5J31 A;  1A38 A;  3IQJ A;  3EFZ A;  4ZQ0 A;  3SMO A;  1IB1 A;  4FL5 A;  4DNK A;  3T0M A;  1A4O A;  3P1R A;  4GNT A;  3SML A;  3NKX A;  3P1O A;  3UX0 A;  4DHR A;  4Y5I A;  3IQU A;  2C1N A;  3P1Q A;  2BTP A;  4N7G A;  2B05 A;  4DAU A;  4N84 A;  3U9X A;  3MHR A;  1QJB A;  4FJ3 A;  3T0L A;  2WH0 A;  2O02 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...