5BY9A

The crystal structure of polyglycilated 14-3-3 protein from giardia intestinalis
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
236
structure length
236
Chain Sequence
AEAFTREDYVFMAQLNENAERYDEMVETMRKISGMEGELSDKERNLLSVAYKNVIGPRRAAWRIVSSIEAKEKGRQKPNAKRIEQIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVFYYKMQGDYYRYLAEYSSGEDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFYYEILASPDRACELARKAFDAAITDLDKLTEESYKDSTLIMQLLRDNLNLWVT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords 14-3-3 protein
publication title Molecular Dynamics Simulations and Structural Analysis of Giardia duodenalis 14-3-3 Protein-Protein Interactions.
pubmed doi rcsb
source organism Giardia intestinalis
total genus 88
structure length 236
sequence length 236
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2015-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 5by9A00
4DHOA 5D2DA 4DHTA 1O9FA 4QLIA 5LHOA 4IEAA 4DHUA 5LX2A 2NPMA 3P1QA 5BY9A 4F7RA 4Y32A 5BTVA 4N84A 3M50A 2V7DA 1O9DA 4FL5A 2C1NA 1A4OA 5EWZA 3SMKA 4DATA 4DHMA 3E6YA 4N7YA 5J31A 4DHRA 2C63A 5D3EA 5EXAA 4WRQA 3UZDA 4Y3BA 4ZQ0A 3SMMA 4JDDA 4E2EA 1YWTA 3RDHA 3LW1A 2O8PA 4ZDRA 3SPRA 3U9XA 2O98A 4DHPA 5LU1A 3IQUA 3P1NA 1A38A 5D3FA 3P1SA 1IB1A 4DAUA 3P1PA 3P1RA 3UALA 4Y5IA 2WH0A 2C74A 3SMNA 1O9CA 5F74A 4DNKA 4DHNA 2BR9A 3P1OA 2O02A 3M51A 3IQVA 5LVZA 3O8IA 3SMLA 3MHRA 1QJAA 2BQ0A 3CU8A 3NKXA 1YZ5A 2B05A 4N7GA 4DX0A 4IHLA 4DHQA 4O46A 3T0MA 4FR3A 4FJ3A 3SMOA 2C23A 5IQPA 4GNTA 3IQJA 4DHSA 3SP5A 4HKCA 2BTPA 5HF3A 3EFZA 1QJBA 3AXYC 3T0LA 5LU2A 1O9EA 4BG6A 3UX0A 2C1JA 4JC3A 4J6SA 3UBWA 1A37A
chains in the Genus database with same CATH superfamily
4DHOA 5D2DA 4DHTA 1O9FA 4MOAA 4QLIA 5LHOA 4IEAA 4DHUA 3CQGA 3EB7A 2NPMA 3P1QA 5LX2A 5BY9A 4F7RA 4Y32A 5BTVA 4N84A 4W8JA 3M50A 2V7DA 1O9DA 4QX1A 3X0UA 4FL5A 2C1NA 1A4OA 1URJA 5EWZA 3SMKA 4DATA 4DHMA 3E6YA 4N7YA 5J31A 1CIYA 3CQCA 3I4RA 4DHRA 2C63A 5D3EA 5EXAA 4WRQA 3UZDA 4Y3BA 4ZQ0A 3SMMA 4JDDA 4E2EA 1JI6A 1YWTA 3RDHA 3LW1A 2O8PA 4ZDRA 1W99A 3SPRA 3U9XA 4QX2A 2O98A 4DHPA 5LU1A 3IQUA 4QX0A 4QX3A 4ARYA 3P1NA 1A38A 5D3FA 3P1SA 1I5PA 1IB1A 4DAUA 3P1PA 3P1RA 3UALA 4Y5IA 2WH0A 2C74A 4D8MA 3SMNA 1O9CA 5F74A 4DNKA 4DHNA 2BR9A 3P1OA 2O02A 3M51A 3IQVA 4ARXA 5LVZA 3O8IA 3SMLA 3MHRA 1DLCA 1S2XA 1QJAA 2BQ0A 3ZHEB 2C9KA 3CU8A 3NKXA 1YZ5A 2B05A 4N7GA 4DX0A 4IHLA 4DHQA 4O46A 3T0MA 4FR3A 4FJ3A 3SMOA 2C23A 5IQPA 4GNTA 3IQJA 4DHSA 3SP5A 4HKCA 2BTPA 5HF3A 3EFZA 1QJBA 3AXYC 3T0LA 5LU2A 1O9EA 4BG6A 3UX0A 2C1JA 4JC3A 4J6SA 3UBWA 1A37A
chains in the Genus database with same CATH topology
4DHOA 5D2DA 4DHTA 1O9FA 4QLIA 5LHOA 4IEAA 4DHUA 5LX2A 2NPMA 3P1QA 5BY9A 4F7RA 4Y32A 5BTVA 4N84A 3M50A 2V7DA 1O9DA 4FL5A 2C1NA 1A4OA 5EWZA 3SMKA 4DATA 4DHMA 3E6YA 4N7YA 5J31A 4DHRA 2C63A 5D3EA 5EXAA 4WRQA 3UZDA 4Y3BA 4ZQ0A 3SMMA 4JDDA 4E2EA 1YWTA 3RDHA 3LW1A 2O8PA 4ZDRA 3SPRA 3U9XA 2O98A 4DHPA 5LU1A 3IQUA 3P1NA 1A38A 5D3FA 3P1SA 1IB1A 4DAUA 3P1PA 3P1RA 3UALA 4Y5IA 2WH0A 2C74A 3SMNA 1O9CA 5F74A 4DNKA 4DHNA 2BR9A 3P1OA 2O02A 3M51A 3IQVA 5LVZA 3O8IA 3SMLA 3MHRA 1QJAA 2BQ0A 3CU8A 3NKXA 1YZ5A 2B05A 4N7GA 4DX0A 4IHLA 4DHQA 4O46A 3T0MA 4FR3A 4FJ3A 3SMOA 2C23A 5IQPA 4GNTA 3IQJA 4DHSA 3SP5A 4HKCA 2BTPA 5HF3A 3EFZA 1QJBA 3AXYC 3T0LA 5LU2A 1O9EA 4BG6A 3UX0A 2C1JA 4JC3A 4J6SA 3UBWA 1A37A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4DHO A;  5D2D A;  4DHT A;  1O9F A;  4QLI A;  5LHO A;  4IEA A;  4DHU A;  5LX2 A;  2NPM A;  3P1Q A;  5BY9 A;  4F7R A;  4Y32 A;  5BTV A;  4N84 A;  3M50 A;  2V7D A;  1O9D A;  4FL5 A;  2C1N A;  1A4O A;  5EWZ A;  3SMK A;  4DAT A;  4DHM A;  3E6Y A;  4N7Y A;  5J31 A;  4DHR A;  2C63 A;  5D3E A;  5EXA A;  4WRQ A;  3UZD A;  4Y3B A;  4ZQ0 A;  3SMM A;  4JDD A;  4E2E A;  1YWT A;  3RDH A;  3LW1 A;  2O8P A;  4ZDR A;  3SPR A;  3U9X A;  2O98 A;  4DHP A;  5LU1 A;  3IQU A;  3P1N A;  1A38 A;  5D3F A;  3P1S A;  1IB1 A;  4DAU A;  3P1P A;  3P1R A;  3UAL A;  4Y5I A;  2WH0 A;  2C74 A;  3SMN A;  1O9C A;  5F74 A;  4DNK A;  4DHN A;  2BR9 A;  3P1O A;  2O02 A;  3M51 A;  3IQV A;  5LVZ A;  3O8I A;  3SML A;  3MHR A;  1QJA A;  2BQ0 A;  3CU8 A;  3NKX A;  1YZ5 A;  2B05 A;  4N7G A;  4DX0 A;  4IHL A;  4DHQ A;  4O46 A;  3T0M A;  4FR3 A;  4FJ3 A;  3SMO A;  2C23 A;  5IQP A;  4GNT A;  3IQJ A;  4DHS A;  3SP5 A;  4HKC A;  2BTP A;  5HF3 A;  3EFZ A;  1QJB A;  3AXY C;  3T0L A;  5LU2 A;  1O9E A;  4BG6 A;  3UX0 A;  2C1J A;  4JC3 A;  4J6S A;  3UBW A;  1A37 A; 
#chains in the Genus database with same CATH topology
 4DHO A;  5D2D A;  4DHT A;  1O9F A;  4MOA A;  4QLI A;  5LHO A;  4IEA A;  4DHU A;  3CQG A;  3EB7 A;  2NPM A;  3P1Q A;  5LX2 A;  5BY9 A;  4F7R A;  4Y32 A;  5BTV A;  4N84 A;  4W8J A;  3M50 A;  2V7D A;  1O9D A;  4QX1 A;  3X0U A;  4FL5 A;  2C1N A;  1A4O A;  1URJ A;  5EWZ A;  3SMK A;  4DAT A;  4DHM A;  3E6Y A;  4N7Y A;  5J31 A;  1CIY A;  3CQC A;  3I4R A;  4DHR A;  2C63 A;  5D3E A;  5EXA A;  4WRQ A;  3UZD A;  4Y3B A;  4ZQ0 A;  3SMM A;  4JDD A;  4E2E A;  1JI6 A;  1YWT A;  3RDH A;  3LW1 A;  2O8P A;  4ZDR A;  1W99 A;  3SPR A;  3U9X A;  4QX2 A;  2O98 A;  4DHP A;  5LU1 A;  3IQU A;  4QX0 A;  4QX3 A;  4ARY A;  3P1N A;  1A38 A;  5D3F A;  3P1S A;  1I5P A;  1IB1 A;  4DAU A;  3P1P A;  3P1R A;  3UAL A;  4Y5I A;  2WH0 A;  2C74 A;  4D8M A;  3SMN A;  1O9C A;  5F74 A;  4DNK A;  4DHN A;  2BR9 A;  3P1O A;  2O02 A;  3M51 A;  3IQV A;  4ARX A;  5LVZ A;  3O8I A;  3SML A;  3MHR A;  1DLC A;  1S2X A;  1QJA A;  2BQ0 A;  3ZHE B;  2C9K A;  3CU8 A;  3NKX A;  1YZ5 A;  2B05 A;  4N7G A;  4DX0 A;  4IHL A;  4DHQ A;  4O46 A;  3T0M A;  4FR3 A;  4FJ3 A;  3SMO A;  2C23 A;  5IQP A;  4GNT A;  3IQJ A;  4DHS A;  3SP5 A;  4HKC A;  2BTP A;  5HF3 A;  3EFZ A;  1QJB A;  3AXY C;  3T0L A;  5LU2 A;  1O9E A;  4BG6 A;  3UX0 A;  2C1J A;  4JC3 A;  4J6S A;  3UBW A;  1A37 A; 
#chains in the Genus database with same CATH homology
 4DHO A;  5D2D A;  4DHT A;  1O9F A;  4QLI A;  5LHO A;  4IEA A;  4DHU A;  5LX2 A;  2NPM A;  3P1Q A;  5BY9 A;  4F7R A;  4Y32 A;  5BTV A;  4N84 A;  3M50 A;  2V7D A;  1O9D A;  4FL5 A;  2C1N A;  1A4O A;  5EWZ A;  3SMK A;  4DAT A;  4DHM A;  3E6Y A;  4N7Y A;  5J31 A;  4DHR A;  2C63 A;  5D3E A;  5EXA A;  4WRQ A;  3UZD A;  4Y3B A;  4ZQ0 A;  3SMM A;  4JDD A;  4E2E A;  1YWT A;  3RDH A;  3LW1 A;  2O8P A;  4ZDR A;  3SPR A;  3U9X A;  2O98 A;  4DHP A;  5LU1 A;  3IQU A;  3P1N A;  1A38 A;  5D3F A;  3P1S A;  1IB1 A;  4DAU A;  3P1P A;  3P1R A;  3UAL A;  4Y5I A;  2WH0 A;  2C74 A;  3SMN A;  1O9C A;  5F74 A;  4DNK A;  4DHN A;  2BR9 A;  3P1O A;  2O02 A;  3M51 A;  3IQV A;  5LVZ A;  3O8I A;  3SML A;  3MHR A;  1QJA A;  2BQ0 A;  3CU8 A;  3NKX A;  1YZ5 A;  2B05 A;  4N7G A;  4DX0 A;  4IHL A;  4DHQ A;  4O46 A;  3T0M A;  4FR3 A;  4FJ3 A;  3SMO A;  2C23 A;  5IQP A;  4GNT A;  3IQJ A;  4DHS A;  3SP5 A;  4HKC A;  2BTP A;  5HF3 A;  3EFZ A;  1QJB A;  3AXY C;  3T0L A;  5LU2 A;  1O9E A;  4BG6 A;  3UX0 A;  2C1J A;  4JC3 A;  4J6S A;  3UBW A;  1A37 A; 
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similar chains in the Genus database (?% sequence similarity)
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