5C3EC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 52
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c3eC01
2R92C 2O5JA 4C3JC 4QIWD 3PO3K 5C4JK 3GTKK 4AYBL 3S15K 3K7AC 1HQMA 3RZOK 1TWAK 2PPBA 3S17C 3S1RC 4KN4A 1YNJA 3H3VL 5M3MK 4YG2A 1BDFA 1SMYA 4YFXA 5D4DA 3S2DC 5C4XC 4A3MC 2YU9C 4XSZA 1I50K 5C44K 3HOVK 2E2IK 4LK0A 2VUMK 4BXXK 3HOXC 1I6HK 3PO3C 4C3IC 5C3EK 3K7AK 4OINA 3S1RK 1SFOC 4QJVA 2B63C 4A3DK 5TMCA 5FLMK 3M4OK 4C3HC 3S2HC 2NVXK 1TWFK 3S14K 4JK1A 3GTMC 4GZYA 1TWFC 2NVYC 4A3EC 3PO2C 1I3QK 3S1MC 2BE5A 4BBRK 4BY1K 4C3JK 5M5WK 3WODA 4A3FK 4ZH4A 1IW7A 3GTOC 4C2MK 4QIWL 1R9TK 2NVTK 1Y1VC 3I4NK 4KMUA 2JA8C 3FKIK 4MQ9A 2NVXC 3HOUC 3CQZC 2NVQK 2Y0SL 4AYBD 4A3KC 5M3FK 3HOUK 2NVQC 3DXJA 4A3JC 4A3GC 4A3BK 4C3IK 3I4NC 1Y1VK 3I4MK 3H0GK 3M3YK 1R9TC 3M4OC 1TWGC 4G7HA 2JA7K 3HOVC 1XPPA 3S2DK 4BY7K 1TWGK 4QJVB 2WB1D 4A3LK 5IYCC 1ZYRA 3PO2K 4G7OA 5IYBC 4XLPA 1Y1WK 1YNNA 2VUMC 2JA5C 3HOYK 1TWAC 3HOYC 4A3BC 4A3JK 2JA5K 4A3GK 3HOWK 4BY7C 3S17K 3S1NK 3EQLA 2PA8D 3FKIC 4OIQA 4OIOA 1TWHC 5C4XK 1TWHK 5IYBK 3HOZC 5IP9C 2R92K 3GTQC 4A3CK 4A3FC 4A3IC 4Q5SA 1TWCC 3HKZL 3S16K 3GTMK 3GTGK 2E2HK 2NVYK 4A3EK 2Y0SD 4A3LC 4BBSK 5C4JC 3GTKC 3S14C 1Y1WC 2PA8L 5IYDK 4MEYA 2PMZD 4XLNA 4BBSC 4MEXA 3GTQK 2WAQL 5M5YK 4A3IK 4A93C 4G7ZA 1SFOK 4YFNA 1I6HC 3HOXK 3HOZK 3S16C 4OIRA 2WB1L 3GTGC 1I50C 5C44C 1TWCK 4A3MK 2YU9K 5FLMC 5IP7C 4A3KK 4BY1C 1K83K 5C3EC 3CQZK 1I3QC 4Y52K 3GTPK 4Y7NC 4BXXC 3S1QK 3GTPC 5TMFA 4C3HK 4C2MC 3GTOK 3S1NC 2JA7C 5IP7K 4X6AK 2A6HA 3H0GC 3M3YC 3S1MK 4BBRC 4Q4ZA 2R7ZC 4Y7NK 2E2JK 2E2IC 5IYCK 2E2JC 1K83C 4Y52C 3S15C 4NOIA 2R7ZK 3H3VD 4A93K 5FJ8K 4LK1A 2PMZL 4A3DC 2B63K 2WAQD 4LLGA 3I4MC 4LJZA 2E2HC 2CW0A 2JA6C 3GTLC 3HKZD 4OIPA 3S1QC 3GTJK 2A68A 1WCMC 4A3CC 3GTJC 3HOWC 5IP9K 2O5IA 3RZDC 3RZOC 2A69A 2NVTC 2R93K 2JA6K 3GTLK 2A6EA 2R93C 4YFKA 3RZDK 4KN7A 4XSXA 2JA8K 4X6AC 3S2HK 5M5XK 1I6VA 5IYDC 1WCMK
chains in the Genus database with same CATH superfamily
2R92C 5JVHS 5C4JK 4AYBL 4BLAA 3S15K 1HQMA 1GE9A 1EFWA 1J98A 3S1RC 4KN4A 1YNJA 1SMYA 4YFXA 1USOA 5C4XC 4A3MC 3G4CA 3VA7A 4LK0A 3HOXC 4KMAA 4C3IC 4QJVA 3M4OK 5FLMK 3BP8C 4JK1A 1O2FB 1J6WA 4GZYA 1I3QK 1USMA 4BBRK 3WODA 3IPJA 2E2HA 4C2MK 4PABA 3I4NK 4MQ9A 4ILDA 2RGRA 4AYBD 2NVQC 3DXJA 4A3GC 4A3BK 3TFIA 1V5VA 1R9TC 3M4OC 1I3QA 2R7ZA 1XPPA 3AD8C 4QJVB 2L3UA 2WB1D 1PJ5A 2GSUA 3AD7C 4WJ3M 4A3JK 2Y3PA 1UV7A 4BY7C 3LYWA 4P5AA 3S1NK 3EQLA 3FKIC 4OIQA 1XXCA 5IYBK 5IP9C 4GFQA 4DDQA 1JOEA 2ZUEA 4KATA 1WCMA 2E2HK 2JA6A 3MMLB 4BBSC 3LAJA 4G7ZA 3HXAA 4LR2A 4KMDA 5C44C 1ZVUA 1C0AA 1WSVA 1IQ0A 1WORA 4PAAA 1XXBA 4Y52K 3ERED 5TMFA 4KM8A 1INNA 2GSOA 2JA5A 5IP7K 3T00A 4X6AK 2KXYA 3JSTA 4BBRC 4Y7NK 5IYCK 2JA7A 3S15C 5FJ8K 1VRQC 4KARA 4LJZA 4P5BA 1WOSA 1BGWA 4OIPA 3S1QC 4A3CC 3HOWC 5IP9K 1BS2A 2XCQA 2NVTC 5TJ3A 5EGEA 3GTLK 2A6EA 2R93C 3RZDK 4KN7A 4X6AC 4P9SA 5IYDC 3K7AC 3RZOK 3A8JA 3GTOA 4KMHA 3H3VL 1F9NA 4WJ4A 5C44K 4LOWA 1IBAA 4BXXK 1SFOC 1TWFK 3T02A 2V6SA 4A3EC 2ZFZA 3H0GA 1BJTA 1RU0A 4ZH4A 3GTOC 3GIRA 1X31C 4G0VA 1O29A 1Y1VC 1WSRA 2JA8C 3FKIK 4O2DA 3HOUC 1O28A 1TWHA 2FQTA 5M3FK 1R9TA 3OEPA 4GTBA 3I4NC 2XCOA 4IO9S 3M3YK 4G7HA 4KB2A 3S2DK 3N0BA 5HQHA 1VH2A 5IYCC 1ZYRA 3PO2K 2VUMC 2JA5C 1ISEA 3HOYK 1TWGA 3AQPA 4A3BC 4A3GK 1O25A 3GTPA 4LQYA 2PA8D 4G0WA 3SZYA 1TWHC 3GSIA 1TWCC 3HKZL 1ZXOA 3GTGK 2NVYA 3GTKC 3GTMA 4MEYA 2PMZD 3GTQK 3S1QK 2R93A 2WAQL 4A3IK 3QX3A 4A93C 3V4GA 4GT9A 4OIRA 2WB1L 5JVOA 3N0CA 2YU9K 3Q3QA 3LAPA 2GAGC 2VUMA 4A3KK 1F7UA 1K83K 4GTAA 1I50A 2EBBA 3PIOS 3GTPC 2JA7C 4AH6A 3OREA 1Y1WA 3M3YC 1L0WA 1B4AA 2R7ZC 4KB4A 2E2JC 4Y52C 4GTDA 4A93K 2P8TA 3GEHA 3I4MC 5IORA 1DCOA 5CHPA 3HKZD 3GTJK 2A68A 1WCMC 3FOFA 5JVGS 5JFEA 2O5IA 3NUHA 2B63A 4XSXA 1YCLA 1EQRA 1O2BA 5M5XK 3TFJA 2O5JA 4QIWD 3PO3K 3GTKK 4GTFA 1TWAK 4FM9A 3TTGA 3S17C 5M3MK 1BDFA 3S2DC 5D4DA 2YU9C 4XSZA 1HI9A 3CQZA 4GTLA 2E2IK 2D6FC 1TWCA 3K7AK 3S1RK 4KM9A 2B63C 5DM7S 3GTKA 2NVXK 3GTMC 4WF9S 2NVYC 3PO2C 2P5MA 2BE5A 4BY1K 3OPFA 1Y1VA 1YX2A 1IW7A 2V6UA 5L46A 2R92A 3CQZC 3ADAC 2Y0SL 3HOUK 4WILA 3DLLS 1PJ7A 1Y1VK 3I4MK 4J3NA 4KAWX 4KC6A 4BLBA 1TWGC 3HOVC 4BY7K 1PJ6A 4A3LK 4G7OA 3GEEA 4M1XA 4KASA 2PHCB 2ZUFA 2E2IA 3SZZA 4OIOA 1VGXA 3G4AA 2RH6A 2R92K 4A3CK 4A3FC 1XZQB 1SFOA 2ZJPS 1EK8A 3S16K 2KPUA 3BUEA 4IOAS 4A3EK 2Y0SD 3AH5A 4A3LC 3S14C 5IYDK 4MEXA 1XZQA 4WFBS 5M5YK 1SFOK 1I6HC 3GTJA 3GTGC 1O26A 1I50C 5DM6S 1TWCK 5FLMC 1XZPA 5IP7C 2CFAB 3CQZK 3GEIA 1WQGA 3AD9C 4C3HK 3N3YA 1XZPB 4C2MC 3L4JA 4WCES 1IS1A 1TWAA 2ZJRS 4KDDA 4Q4ZA 1WQHA 1K83C 4NOIA 3TFHA 2PMZL 2B63K 2WAQD 1ZBSA 4LLGA 4C45A 5EGHA 2E2HC 2JA6C 3PIPS 1ZQ1C 1J6XA 5IOTA 3GTJC 3RZDC 2R93K 1DD5A 3GTQA 2JA8K 5IOSA 1O2AA 2NVXA 4C3JC 5E68A 2PPBA 3BP3A 1JVIA 4GTEA 1IL2A 4YG2A 3S17K 3HOVK 1I50K 2VUMK 1G51A 2CFAA 1I6HK 3PO3C 5C3EK 1EH1A 3FHZA 4OINA 1IE0A 4A3DK 3CF5S 5TMCA 4C3HC 3GDZA 3S2HC 3S14K 1TWFC 3S1MC 3S0XA 4C3JK 5M5WK 3GTGA 4BKWA 4GTCA 4A3FK 4QIWL 1R9TK 2NVTK 4KMUA 2FQOA 2NVXC 2KQ1A 3CAGA 2XCRB 4WFAS 2NVQK 4A3KC 1WIHA 1B4BA 4A3JC 4C3IK 3H0GK 2JA7K 1TWGK 1WOOA 1TWFA 3A8IA 1Y1WK 5IYBC 4XLPA 2KWAA 1YNNA 4IOCS 4G0UA 3T01A 1TWAC 3HOYC 2JA5K 1J6VA 1F7VA 3HOWK 1K83A 1EI6A 5C4XK 1TWHK 2YU9A 3HOZC 3GTQC 2JH3A 4A3IC 4Q5SA 4U67S 3GTMK 2NVYK 1VJEA 3A8KA 2GAHC 5C4JC 4BBSK 2PA8L 1Y1WC 3GTLA 4XLNA 2W7VA 3HOZK 4YFNA 1FEUA 2V6TA 3HOXK 3S16C 4A3MK 4BY1C 5IOQA 5C3EC 4RMFA 1I3QC 2ZJQS 3GTPK 3FOEA 4Y7NC 4BXXC 3L4KA 4FZBA 1VLOA 3GTOK 3S1NC 2GSNA 2A6HA 3H0GC 3S1MK 2E2JK 2E2IC 2R7ZK 4XCHA 3H3VD 5HL8A 2L5NA 5HL7S 4LK1A 3LPXA 4A3DC 1DCHA 2CW0A 3GTLC 1O24A 5CJ9A 3FKIA 3AQOA 1WQFA 1O27A 1KQ4A 1DCPA 1JQWA 3RZOC 2A69A 1AB4A 2JA6K 4YFKA 4WFNS 3S2HK 1WOPA 1XXAA 1I6VA 1F93A 1WCMK
chains in the Genus database with same CATH topology
2R92C 2O5JA 4C3JC 4QIWD 3PO3K 5C4JK 3GTKK 4AYBL 3S15K 3K7AC 1HQMA 3RZOK 1TWAK 2PPBA 3S17C 3S1RC 4KN4A 1YNJA 3H3VL 5M3MK 4YG2A 1BDFA 1SMYA 4YFXA 5D4DA 3S2DC 5C4XC 4A3MC 2YU9C 4XSZA 1I50K 5C44K 3HOVK 2E2IK 4LK0A 2VUMK 4BXXK 3HOXC 1I6HK 3PO3C 4C3IC 5C3EK 3K7AK 4OINA 3S1RK 1SFOC 4QJVA 2B63C 4A3DK 5TMCA 5FLMK 3M4OK 4C3HC 3S2HC 2NVXK 1TWFK 3S14K 4JK1A 3GTMC 4GZYA 1TWFC 2NVYC 4A3EC 3PO2C 1I3QK 3S1MC 2BE5A 4BBRK 4BY1K 4C3JK 5M5WK 3WODA 4A3FK 4ZH4A 1IW7A 3GTOC 4C2MK 4QIWL 1R9TK 2NVTK 1Y1VC 3I4NK 4KMUA 2JA8C 3FKIK 4MQ9A 2NVXC 3HOUC 3CQZC 2NVQK 2Y0SL 4AYBD 4A3KC 5M3FK 3HOUK 2NVQC 3DXJA 4A3JC 4A3GC 4A3BK 4C3IK 3I4NC 1Y1VK 3I4MK 3H0GK 3M3YK 1R9TC 3M4OC 1TWGC 4G7HA 2JA7K 3HOVC 1XPPA 3S2DK 4BY7K 1TWGK 4QJVB 2WB1D 4A3LK 5IYCC 1ZYRA 3PO2K 4G7OA 5IYBC 4XLPA 1Y1WK 1YNNA 2VUMC 2JA5C 3HOYK 1TWAC 3HOYC 4A3BC 4A3JK 2JA5K 4A3GK 3HOWK 4BY7C 3S17K 3S1NK 3EQLA 2PA8D 3FKIC 4OIQA 4OIOA 1TWHC 5C4XK 1TWHK 5IYBK 3HOZC 5IP9C 2R92K 3GTQC 4A3CK 4A3FC 4A3IC 4Q5SA 1TWCC 3HKZL 3S16K 3GTMK 3GTGK 2E2HK 2NVYK 4A3EK 2Y0SD 4A3LC 4BBSK 5C4JC 3GTKC 3S14C 1Y1WC 2PA8L 5IYDK 4MEYA 2PMZD 4XLNA 4BBSC 4MEXA 3GTQK 2WAQL 5M5YK 4A3IK 4A93C 4G7ZA 1SFOK 4YFNA 1I6HC 3HOXK 3HOZK 3S16C 4OIRA 2WB1L 3GTGC 1I50C 5C44C 1TWCK 4A3MK 2YU9K 5FLMC 5IP7C 4A3KK 4BY1C 1K83K 5C3EC 3CQZK 1I3QC 4Y52K 3GTPK 4Y7NC 4BXXC 3S1QK 3GTPC 5TMFA 4C3HK 4C2MC 3GTOK 3S1NC 2JA7C 5IP7K 4X6AK 2A6HA 3H0GC 3M3YC 3S1MK 4BBRC 4Q4ZA 2R7ZC 4Y7NK 2E2JK 2E2IC 5IYCK 2E2JC 1K83C 4Y52C 3S15C 4NOIA 2R7ZK 3H3VD 4A93K 5FJ8K 4LK1A 2PMZL 4A3DC 2B63K 2WAQD 4LLGA 3I4MC 4LJZA 2E2HC 2CW0A 2JA6C 3GTLC 3HKZD 4OIPA 3S1QC 3GTJK 2A68A 1WCMC 4A3CC 3GTJC 3HOWC 5IP9K 2O5IA 3RZDC 3RZOC 2A69A 2NVTC 2R93K 2JA6K 3GTLK 2A6EA 2R93C 4YFKA 3RZDK 4KN7A 4XSXA 2JA8K 4X6AC 3S2HK 5M5XK 1I6VA 5IYDC 1WCMK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2R92 C;  2O5J A;  4C3J C;  4QIW D;  3PO3 K;  5C4J K;  3GTK K;  4AYB L;  3S15 K;  3K7A C;  1HQM A;  3RZO K;  1TWA K;  2PPB A;  3S17 C;  3S1R C;  4KN4 A;  1YNJ A;  3H3V L;  5M3M K;  4YG2 A;  1BDF A;  1SMY A;  4YFX A;  5D4D A;  3S2D C;  5C4X C;  4A3M C;  2YU9 C;  4XSZ A;  1I50 K;  5C44 K;  3HOV K;  2E2I K;  4LK0 A;  2VUM K;  4BXX K;  3HOX C;  1I6H K;  3PO3 C;  4C3I C;  5C3E K;  3K7A K;  4OIN A;  3S1R K;  1SFO C;  4QJV A;  2B63 C;  4A3D K;  5TMC A;  5FLM K;  3M4O K;  4C3H C;  3S2H C;  2NVX K;  1TWF K;  3S14 K;  4JK1 A;  3GTM C;  4GZY A;  1TWF C;  2NVY C;  4A3E C;  3PO2 C;  1I3Q K;  3S1M C;  2BE5 A;  4BBR K;  4BY1 K;  4C3J K;  5M5W K;  3WOD A;  4A3F K;  4ZH4 A;  1IW7 A;  3GTO C;  4C2M K;  4QIW L;  1R9T K;  2NVT K;  1Y1V C;  3I4N K;  4KMU A;  2JA8 C;  3FKI K;  4MQ9 A;  2NVX C;  3HOU C;  3CQZ C;  2NVQ K;  2Y0S L;  4AYB D;  4A3K C;  5M3F K;  3HOU K;  2NVQ C;  3DXJ A;  4A3J C;  4A3G C;  4A3B K;  4C3I K;  3I4N C;  1Y1V K;  3I4M K;  3H0G K;  3M3Y K;  1R9T C;  3M4O C;  1TWG C;  4G7H A;  2JA7 K;  3HOV C;  1XPP A;  3S2D K;  4BY7 K;  1TWG K;  4QJV B;  2WB1 D;  4A3L K;  5IYC C;  1ZYR A;  3PO2 K;  4G7O A;  5IYB C;  4XLP A;  1Y1W K;  1YNN A;  2VUM C;  2JA5 C;  3HOY K;  1TWA C;  3HOY C;  4A3B C;  4A3J K;  2JA5 K;  4A3G K;  3HOW K;  4BY7 C;  3S17 K;  3S1N K;  3EQL A;  2PA8 D;  3FKI C;  4OIQ A;  4OIO A;  1TWH C;  5C4X K;  1TWH K;  5IYB K;  3HOZ C;  5IP9 C;  2R92 K;  3GTQ C;  4A3C K;  4A3F C;  4A3I C;  4Q5S A;  1TWC C;  3HKZ L;  3S16 K;  3GTM K;  3GTG K;  2E2H K;  2NVY K;  4A3E K;  2Y0S D;  4A3L C;  4BBS K;  5C4J C;  3GTK C;  3S14 C;  1Y1W C;  2PA8 L;  5IYD K;  4MEY A;  2PMZ D;  4XLN A;  4BBS C;  4MEX A;  3GTQ K;  2WAQ L;  5M5Y K;  4A3I K;  4A93 C;  4G7Z A;  1SFO K;  4YFN A;  1I6H C;  3HOX K;  3HOZ K;  3S16 C;  4OIR A;  2WB1 L;  3GTG C;  1I50 C;  5C44 C;  1TWC K;  4A3M K;  2YU9 K;  5FLM C;  5IP7 C;  4A3K K;  4BY1 C;  1K83 K;  5C3E C;  3CQZ K;  1I3Q C;  4Y52 K;  3GTP K;  4Y7N C;  4BXX C;  3S1Q K;  3GTP C;  5TMF A;  4C3H K;  4C2M C;  3GTO K;  3S1N C;  2JA7 C;  5IP7 K;  4X6A K;  2A6H A;  3H0G C;  3M3Y C;  3S1M K;  4BBR C;  4Q4Z A;  2R7Z C;  4Y7N K;  2E2J K;  2E2I C;  5IYC K;  2E2J C;  1K83 C;  4Y52 C;  3S15 C;  4NOI A;  2R7Z K;  3H3V D;  4A93 K;  5FJ8 K;  4LK1 A;  2PMZ L;  4A3D C;  2B63 K;  2WAQ D;  4LLG A;  3I4M C;  4LJZ A;  2E2H C;  2CW0 A;  2JA6 C;  3GTL C;  3HKZ D;  4OIP A;  3S1Q C;  3GTJ K;  2A68 A;  1WCM C;  4A3C C;  3GTJ C;  3HOW C;  5IP9 K;  2O5I A;  3RZD C;  3RZO C;  2A69 A;  2NVT C;  2R93 K;  2JA6 K;  3GTL K;  2A6E A;  2R93 C;  4YFK A;  3RZD K;  4KN7 A;  4XSX A;  2JA8 K;  4X6A C;  3S2H K;  5M5X K;  1I6V A;  5IYD C;  1WCM K; 
#chains in the Genus database with same CATH topology
 2R92 C;  5JVH S;  5C4J K;  4AYB L;  4BLA A;  3S15 K;  1HQM A;  1GE9 A;  1EFW A;  1J98 A;  3S1R C;  4KN4 A;  1YNJ A;  1SMY A;  4YFX A;  1USO A;  5C4X C;  4A3M C;  3G4C A;  3VA7 A;  4LK0 A;  3HOX C;  4KMA A;  4C3I C;  4QJV A;  3M4O K;  5FLM K;  3BP8 C;  4JK1 A;  1O2F B;  1J6W A;  4GZY A;  1I3Q K;  1USM A;  4BBR K;  3WOD A;  3IPJ A;  2E2H A;  4C2M K;  4PAB A;  3I4N K;  4MQ9 A;  4ILD A;  2RGR A;  4AYB D;  2NVQ C;  3DXJ A;  4A3G C;  4A3B K;  3TFI A;  1V5V A;  1R9T C;  3M4O C;  1I3Q A;  2R7Z A;  1XPP A;  3AD8 C;  4QJV B;  2L3U A;  2WB1 D;  1PJ5 A;  2GSU A;  3AD7 C;  4WJ3 M;  4A3J K;  2Y3P A;  1UV7 A;  4BY7 C;  3LYW A;  4P5A A;  3S1N K;  3EQL A;  3FKI C;  4OIQ A;  1XXC A;  5IYB K;  5IP9 C;  4GFQ A;  4DDQ A;  1JOE A;  2ZUE A;  4KAT A;  1WCM A;  2E2H K;  2JA6 A;  3MML B;  4BBS C;  3LAJ A;  4G7Z A;  3HXA A;  4LR2 A;  4KMD A;  5C44 C;  1ZVU A;  1C0A A;  1WSV A;  1IQ0 A;  1WOR A;  4PAA A;  1XXB A;  4Y52 K;  3ERE D;  5TMF A;  4KM8 A;  1INN A;  2GSO A;  2JA5 A;  5IP7 K;  3T00 A;  4X6A K;  2KXY A;  3JST A;  4BBR C;  4Y7N K;  5IYC K;  2JA7 A;  3S15 C;  5FJ8 K;  1VRQ C;  4KAR A;  4LJZ A;  4P5B A;  1WOS A;  1BGW A;  4OIP A;  3S1Q C;  4A3C C;  3HOW C;  5IP9 K;  1BS2 A;  2XCQ A;  2NVT C;  5TJ3 A;  5EGE A;  3GTL K;  2A6E A;  2R93 C;  3RZD K;  4KN7 A;  4X6A C;  4P9S A;  5IYD C;  3K7A C;  3RZO K;  3A8J A;  3GTO A;  4KMH A;  3H3V L;  1F9N A;  4WJ4 A;  5C44 K;  4LOW A;  1IBA A;  4BXX K;  1SFO C;  1TWF K;  3T02 A;  2V6S A;  4A3E C;  2ZFZ A;  3H0G A;  1BJT A;  1RU0 A;  4ZH4 A;  3GTO C;  3GIR A;  1X31 C;  4G0V A;  1O29 A;  1Y1V C;  1WSR A;  2JA8 C;  3FKI K;  4O2D A;  3HOU C;  1O28 A;  1TWH A;  2FQT A;  5M3F K;  1R9T A;  3OEP A;  4GTB A;  3I4N C;  2XCO A;  4IO9 S;  3M3Y K;  4G7H A;  4KB2 A;  3S2D K;  3N0B A;  5HQH A;  1VH2 A;  5IYC C;  1ZYR A;  3PO2 K;  2VUM C;  2JA5 C;  1ISE A;  3HOY K;  1TWG A;  3AQP A;  4A3B C;  4A3G K;  1O25 A;  3GTP A;  4LQY A;  2PA8 D;  4G0W A;  3SZY A;  1TWH C;  3GSI A;  1TWC C;  3HKZ L;  1ZXO A;  3GTG K;  2NVY A;  3GTK C;  3GTM A;  4MEY A;  2PMZ D;  3GTQ K;  3S1Q K;  2R93 A;  2WAQ L;  4A3I K;  3QX3 A;  4A93 C;  3V4G A;  4GT9 A;  4OIR A;  2WB1 L;  5JVO A;  3N0C A;  2YU9 K;  3Q3Q A;  3LAP A;  2GAG C;  2VUM A;  4A3K K;  1F7U A;  1K83 K;  4GTA A;  1I50 A;  2EBB A;  3PIO S;  3GTP C;  2JA7 C;  4AH6 A;  3ORE A;  1Y1W A;  3M3Y C;  1L0W A;  1B4A A;  2R7Z C;  4KB4 A;  2E2J C;  4Y52 C;  4GTD A;  4A93 K;  2P8T A;  3GEH A;  3I4M C;  5IOR A;  1DCO A;  5CHP A;  3HKZ D;  3GTJ K;  2A68 A;  1WCM C;  3FOF A;  5JVG S;  5JFE A;  2O5I A;  3NUH A;  2B63 A;  4XSX A;  1YCL A;  1EQR A;  1O2B A;  5M5X K;  3TFJ A;  2O5J A;  4QIW D;  3PO3 K;  3GTK K;  4GTF A;  1TWA K;  4FM9 A;  3TTG A;  3S17 C;  5M3M K;  1BDF A;  3S2D C;  5D4D A;  2YU9 C;  4XSZ A;  1HI9 A;  3CQZ A;  4GTL A;  2E2I K;  2D6F C;  1TWC A;  3K7A K;  3S1R K;  4KM9 A;  2B63 C;  5DM7 S;  3GTK A;  2NVX K;  3GTM C;  4WF9 S;  2NVY C;  3PO2 C;  2P5M A;  2BE5 A;  4BY1 K;  3OPF A;  1Y1V A;  1YX2 A;  1IW7 A;  2V6U A;  5L46 A;  2R92 A;  3CQZ C;  3ADA C;  2Y0S L;  3HOU K;  4WIL A;  3DLL S;  1PJ7 A;  1Y1V K;  3I4M K;  4J3N A;  4KAW X;  4KC6 A;  4BLB A;  1TWG C;  3HOV C;  4BY7 K;  1PJ6 A;  4A3L K;  4G7O A;  3GEE A;  4M1X A;  4KAS A;  2PHC B;  2ZUF A;  2E2I A;  3SZZ A;  4OIO A;  1VGX A;  3G4A A;  2RH6 A;  2R92 K;  4A3C K;  4A3F C;  1XZQ B;  1SFO A;  2ZJP S;  1EK8 A;  3S16 K;  2KPU A;  3BUE A;  4IOA S;  4A3E K;  2Y0S D;  3AH5 A;  4A3L C;  3S14 C;  5IYD K;  4MEX A;  1XZQ A;  4WFB S;  5M5Y K;  1SFO K;  1I6H C;  3GTJ A;  3GTG C;  1O26 A;  1I50 C;  5DM6 S;  1TWC K;  5FLM C;  1XZP A;  5IP7 C;  2CFA B;  3CQZ K;  3GEI A;  1WQG A;  3AD9 C;  4C3H K;  3N3Y A;  1XZP B;  4C2M C;  3L4J A;  4WCE S;  1IS1 A;  1TWA A;  2ZJR S;  4KDD A;  4Q4Z A;  1WQH A;  1K83 C;  4NOI A;  3TFH A;  2PMZ L;  2B63 K;  2WAQ D;  1ZBS A;  4LLG A;  4C45 A;  5EGH A;  2E2H C;  2JA6 C;  3PIP S;  1ZQ1 C;  1J6X A;  5IOT A;  3GTJ C;  3RZD C;  2R93 K;  1DD5 A;  3GTQ A;  2JA8 K;  5IOS A;  1O2A A;  2NVX A;  4C3J C;  5E68 A;  2PPB A;  3BP3 A;  1JVI A;  4GTE A;  1IL2 A;  4YG2 A;  3S17 K;  3HOV K;  1I50 K;  2VUM K;  1G51 A;  2CFA A;  1I6H K;  3PO3 C;  5C3E K;  1EH1 A;  3FHZ A;  4OIN A;  1IE0 A;  4A3D K;  3CF5 S;  5TMC A;  4C3H C;  3GDZ A;  3S2H C;  3S14 K;  1TWF C;  3S1M C;  3S0X A;  4C3J K;  5M5W K;  3GTG A;  4BKW A;  4GTC A;  4A3F K;  4QIW L;  1R9T K;  2NVT K;  4KMU A;  2FQO A;  2NVX C;  2KQ1 A;  3CAG A;  2XCR B;  4WFA S;  2NVQ K;  4A3K C;  1WIH A;  1B4B A;  4A3J C;  4C3I K;  3H0G K;  2JA7 K;  1TWG K;  1WOO A;  1TWF A;  3A8I A;  1Y1W K;  5IYB C;  4XLP A;  2KWA A;  1YNN A;  4IOC S;  4G0U A;  3T01 A;  1TWA C;  3HOY C;  2JA5 K;  1J6V A;  1F7V A;  3HOW K;  1K83 A;  1EI6 A;  5C4X K;  1TWH K;  2YU9 A;  3HOZ C;  3GTQ C;  2JH3 A;  4A3I C;  4Q5S A;  4U67 S;  3GTM K;  2NVY K;  1VJE A;  3A8K A;  2GAH C;  5C4J C;  4BBS K;  2PA8 L;  1Y1W C;  3GTL A;  4XLN A;  2W7V A;  3HOZ K;  4YFN A;  1FEU A;  2V6T A;  3HOX K;  3S16 C;  4A3M K;  4BY1 C;  5IOQ A;  5C3E C;  4RMF A;  1I3Q C;  2ZJQ S;  3GTP K;  3FOE A;  4Y7N C;  4BXX C;  3L4K A;  4FZB A;  1VLO A;  3GTO K;  3S1N C;  2GSN A;  2A6H A;  3H0G C;  3S1M K;  2E2J K;  2E2I C;  2R7Z K;  4XCH A;  3H3V D;  5HL8 A;  2L5N A;  5HL7 S;  4LK1 A;  3LPX A;  4A3D C;  1DCH A;  2CW0 A;  3GTL C;  1O24 A;  5CJ9 A;  3FKI A;  3AQO A;  1WQF A;  1O27 A;  1KQ4 A;  1DCP A;  1JQW A;  3RZO C;  2A69 A;  1AB4 A;  2JA6 K;  4YFK A;  4WFN S;  3S2H K;  1WOP A;  1XXA A;  1I6V A;  1F93 A;  1WCM K; 
#chains in the Genus database with same CATH homology
 2R92 C;  2O5J A;  4C3J C;  4QIW D;  3PO3 K;  5C4J K;  3GTK K;  4AYB L;  3S15 K;  3K7A C;  1HQM A;  3RZO K;  1TWA K;  2PPB A;  3S17 C;  3S1R C;  4KN4 A;  1YNJ A;  3H3V L;  5M3M K;  4YG2 A;  1BDF A;  1SMY A;  4YFX A;  5D4D A;  3S2D C;  5C4X C;  4A3M C;  2YU9 C;  4XSZ A;  1I50 K;  5C44 K;  3HOV K;  2E2I K;  4LK0 A;  2VUM K;  4BXX K;  3HOX C;  1I6H K;  3PO3 C;  4C3I C;  5C3E K;  3K7A K;  4OIN A;  3S1R K;  1SFO C;  4QJV A;  2B63 C;  4A3D K;  5TMC A;  5FLM K;  3M4O K;  4C3H C;  3S2H C;  2NVX K;  1TWF K;  3S14 K;  4JK1 A;  3GTM C;  4GZY A;  1TWF C;  2NVY C;  4A3E C;  3PO2 C;  1I3Q K;  3S1M C;  2BE5 A;  4BBR K;  4BY1 K;  4C3J K;  5M5W K;  3WOD A;  4A3F K;  4ZH4 A;  1IW7 A;  3GTO C;  4C2M K;  4QIW L;  1R9T K;  2NVT K;  1Y1V C;  3I4N K;  4KMU A;  2JA8 C;  3FKI K;  4MQ9 A;  2NVX C;  3HOU C;  3CQZ C;  2NVQ K;  2Y0S L;  4AYB D;  4A3K C;  5M3F K;  3HOU K;  2NVQ C;  3DXJ A;  4A3J C;  4A3G C;  4A3B K;  4C3I K;  3I4N C;  1Y1V K;  3I4M K;  3H0G K;  3M3Y K;  1R9T C;  3M4O C;  1TWG C;  4G7H A;  2JA7 K;  3HOV C;  1XPP A;  3S2D K;  4BY7 K;  1TWG K;  4QJV B;  2WB1 D;  4A3L K;  5IYC C;  1ZYR A;  3PO2 K;  4G7O A;  5IYB C;  4XLP A;  1Y1W K;  1YNN A;  2VUM C;  2JA5 C;  3HOY K;  1TWA C;  3HOY C;  4A3B C;  4A3J K;  2JA5 K;  4A3G K;  3HOW K;  4BY7 C;  3S17 K;  3S1N K;  3EQL A;  2PA8 D;  3FKI C;  4OIQ A;  4OIO A;  1TWH C;  5C4X K;  1TWH K;  5IYB K;  3HOZ C;  5IP9 C;  2R92 K;  3GTQ C;  4A3C K;  4A3F C;  4A3I C;  4Q5S A;  1TWC C;  3HKZ L;  3S16 K;  3GTM K;  3GTG K;  2E2H K;  2NVY K;  4A3E K;  2Y0S D;  4A3L C;  4BBS K;  5C4J C;  3GTK C;  3S14 C;  1Y1W C;  2PA8 L;  5IYD K;  4MEY A;  2PMZ D;  4XLN A;  4BBS C;  4MEX A;  3GTQ K;  2WAQ L;  5M5Y K;  4A3I K;  4A93 C;  4G7Z A;  1SFO K;  4YFN A;  1I6H C;  3HOX K;  3HOZ K;  3S16 C;  4OIR A;  2WB1 L;  3GTG C;  1I50 C;  5C44 C;  1TWC K;  4A3M K;  2YU9 K;  5FLM C;  5IP7 C;  4A3K K;  4BY1 C;  1K83 K;  5C3E C;  3CQZ K;  1I3Q C;  4Y52 K;  3GTP K;  4Y7N C;  4BXX C;  3S1Q K;  3GTP C;  5TMF A;  4C3H K;  4C2M C;  3GTO K;  3S1N C;  2JA7 C;  5IP7 K;  4X6A K;  2A6H A;  3H0G C;  3M3Y C;  3S1M K;  4BBR C;  4Q4Z A;  2R7Z C;  4Y7N K;  2E2J K;  2E2I C;  5IYC K;  2E2J C;  1K83 C;  4Y52 C;  3S15 C;  4NOI A;  2R7Z K;  3H3V D;  4A93 K;  5FJ8 K;  4LK1 A;  2PMZ L;  4A3D C;  2B63 K;  2WAQ D;  4LLG A;  3I4M C;  4LJZ A;  2E2H C;  2CW0 A;  2JA6 C;  3GTL C;  3HKZ D;  4OIP A;  3S1Q C;  3GTJ K;  2A68 A;  1WCM C;  4A3C C;  3GTJ C;  3HOW C;  5IP9 K;  2O5I A;  3RZD C;  3RZO C;  2A69 A;  2NVT C;  2R93 K;  2JA6 K;  3GTL K;  2A6E A;  2R93 C;  4YFK A;  3RZD K;  4KN7 A;  4XSX A;  2JA8 K;  4X6A C;  3S2H K;  5M5X K;  1I6V A;  5IYD C;  1WCM K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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