5C3EC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule tags Transferase/dna/rna
total genus 52
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c3eC01
4A3JC 2CW0A 4G7OA 3RZDK 5C44C 2E2HK 4C2MK 3S1QC 2PA8D 4QJVA 4Q4ZA 2NVXC 2JA7K 3GTQK 3M3YC 3HOYK 2Y0SD 4A3IK 4A3CC 4XLPA 3CQZK 3S1NC 5IYCK 4C3JK 3S1MK 2JA5C 4Y7NK 5IYDC 3S17K 3M4OK 2E2HC 3S2DK 4XLNA 1WCMC 1K83C 2YU9K 2WB1D 5D4DA 1TWGK 1TWCK 5FLMK 3CQZC 4XSXA 3PO2K 2E2IK 4C3JC 3H3VD 3S2HK 3GTJK 1I3QC 4AYBL 2E2JK 3S1RC 1I50K 3WODA 4C3HC 3S16K 2YU9C 2R93K 2NVYC 1TWFK 4BBRK 1HQMA 1TWGC 2NVTK 1TWCC 2PMZD 2O5JA 2R7ZK 1Y1VC 4YFNA 4Q5SA 1SFOK 2VUMC 3PO2C 3S14C 5IP9C 3GTOK 4MEXA 4LJZA 2JA6K 2A6HA 1TWHK 3HOWK 3HKZL 4A3KK 1I6HK 1Y1WC 3H0GC 3GTPC 5M5XK 3K7AC 4A3EC 5IP7K 3S15C 3GTLK 1I6VA 4YFKA 2O5IA 4C3IK 3HOZK 2B63K 4A3FK 2BE5A 1BDFA 5M5YK 3RZOK 4BXXK 1ZYRA 5C3EC 4A3MK 4A3BK 3RZDC 2PA8L 3HOVK 4C2MC 2JA7C 2Y0SL 3GTQC 3HOYC 4A3IC 3GTGK 5IYCC 4A3FC 3S1MC 4LK0A 4YFXA 4Y7NC 4NOIA 4XSZA 4G7ZA 3GTKK 3S17C 3M4OC 4KMUA 4BY1K 4Y52K 2WB1L 3S2DC 5FLMC 4X6AK 4OINA 2WAQL 3H3VL 3FKIK 5C4JK 4BY7K 2E2IC 3S2HC 4JK1A 4LLGA 3GTJC 3I4NK 2E2JC 4QIWD 1I50C 3S16C 2NVQK 3GTMK 2PMZL 2R93C 1TWFC 4BBRC 2NVTC 2R7ZC 3PO3K 4A3GK 4G7HA 4OIRA 4A3LK 5C4JC 1SFOC 1YNJA 5M3FK 3GTOC 2R92K 2JA8K 2JA6C 4MQ9A 1XPPA 3I4MK 4A3DK 1IW7A 1R9TK 1TWHC 3HOWC 4A3KC 2NVQC 5C4XK 1I6HC 3HOXK 4A3GC 4MEYA 1TWAK 5IP7C 4A3JK 4A3LC 3GTLC 5IYBK 5M3MK 4C3IC 3HOZC 2B63C 3HKZD 3RZOC 2NVXK 3S1QK 4BXXC 4A3MC 4A3CK 1R9TC 4A3BC 3S1NK 3HOVC 4OIPA 1TWAC 2JA5K 5TMCA 5IYDK 4GZYA 3EQLA 5IYBC 1SMYA 3GTGC 4KN4A 5M5WK 1WCMK 1K83K 3HOUK 2A6EA 4BBSK 3GTKC 4Y52C 4BY1C 5FJ8K 4OIQA 1I3QK 1YNNA 4X6AC 3S1RK 4AYBD 3FKIC 4C3HK 4BY7C 3HOUC 2NVYK 4A93K 3I4NC 2A68A 4QIWL 4BBSC 4KN7A 1Y1VK 4QJVB 4ZH4A 2WAQD 5TMFA 2VUMK 3GTMC 5IP9K 3S14K 3PO3C 4OIOA 4YG2A 5C44K 1Y1WK 4LK1A 3H0GK 3GTPK 2R92C 4A93C 2JA8C 4A3DC 3K7AK 4A3EK 3I4MC 3M3YK 3S15K 2A69A 3HOXC 2PPBA 5C4XC 3DXJA 5C3EK
chains in the Genus database with same CATH superfamily
3GTMA 3S1QC 2PA8D 1VH2A 2JA7K 3GTQK 1C0AA 3HOYK 4A3IK 3CQZK 4XLPA 5IYCK 1EH1A 4P9SA 5CHPA 3M4OK 1G51A 4XLNA 2YU9K 5FLMK 3CQZC 3LAPA 3GTJK 1BS2A 4GTDA 3L4JA 2YU9C 2NVYC 2JA5A 2R7ZK 3T01A 3SZYA 2O5JA 2CFAA 3V4GA 4GTLA 2E2HA 5IP9C 1K83A 2PHCB 3HOWK 1XXAA 1I6HK 4BLBA 5IP7K 3S15C 2O5IA 4C3IK 3RZOK 2BE5A 4KATA 1ZYRA 3ADAC 3MMLB 4GFQA 4C2MC 2Y0SL 4KAWX 1I50A 3GTGK 3S1MC 3H0GA 4YFXA 1PJ5A 1RU0A 4WFBS 4NOIA 4G7ZA 3S17C 2GAHC 2KPUA 1WQHA 2Y3PA 1J6WA 1V5VA 1GE9A 4BKWA 3S2HC 3A8IA 2E2JC 3AD7C 1I50C 3PIOS 4XCHA 2PMZL 2R93C 1TWFC 4BBRC 2NVTC 3AD8C 4A3GK 4G7HA 4OIRA 1ZQ1C 1WQGA 2R92K 2JA6C 1XPPA 1WOSA 1TWHC 3HOXK 4KASA 2E2IA 4A3GC 4MEYA 4G0VA 1YX2A 1J98A 3GTLC 2XCRB 5IOTA 1USMA 3BP3A 3S1NK 1SFOA 3BP8C 1SMYA 4KN4A 1IE0A 1WCMK 3HOUK 2A6EA 4BBSK 3GTKC 3L4KA 1DCHA 4X6AC 3S1RK 3FKIC 1R9TA 4BY7C 3HOUC 2FQTA 4BBSC 3ERED 4KB2A 3S14K 3PO3C 2GSOA 4OIOA 4YG2A 1Y1WK 3GTPK 3LAJA 4A3DC 3K7AK 1WSRA 1JQWA 1XZPB 4A3JC 3RZDK 4GTFA 3N3YA 2P5MA 2NVXC 5IOSA 3AQOA 4Y7NK 5IYDC 3G4CA 1B4AA 3S2DK 2WB1D 5D4DA 1TWCK 1VGXA 3H3VD 1PJ7A 1I3QC 4AYBL 4WILA 3WODA 1F7VA 2L3UA 1TWCC 4P5BA 1Y1VC 4YFNA 4IOAS 2VUMC 1O28A 3FOFA 3GTOK 4MEXA 1FEUA 4LJZA 3SZZA 5JVOA 3CQZA 4IO9S 4A3EC 2KXYA 4P5AA 3CAGA 3HOZK 2B63K 2YU9A 5M5YK 2NVYA 2ZJPS 2L5NA 3AD9C 4A3MK 4BXXK 4LQYA 4A3BK 5IOQA 2PA8L 3HOVK 2JA7C 3A8KA 3GTQC 2GAGC 3HOYC 4A3IC 5IYCC 2XCQA 4LK0A 3GSIA 4GTAA 4XSZA 3LYWA 3M4OC 4BY1K 3NUHA 5FLMC 2WAQL 4JK1A 3GTJC 1AB4A 1ISEA 4WFAS 5JVGS 2NVQK 3GTMK 1EK8A 2R7ZC 3S0XA 1B4BA 1IL2A 3HOWC 5C4XK 2NVQC 1I6HC 1TWAK 5IP7C 1IQ0A 1VRQC 5M3MK 4KC6A 4C3IC 3RZOC 3BUEA 3GEIA 2KQ1A 4FZBA 1TWFA 4M1XA 2R93A 4A3CK 1XZQA 1O2AA 2ZUFA 1TWAC 2JA5K 1WORA 4PABA 5TMCA 2JA6A 1XXBA 1DCPA 3EQLA 4ILDA 1WSVA 3GTGC 1UV7A 1TWHA 5M5WK 1K83K 3GTLA 2CFAB 3CF5S 4C3HK 5HQHA 4A93K 2A68A 4KN7A 4QJVB 2P8TA 1DD5A 4KM9A 3GTKA 3H0GK 2R92C 4A93C 1HI9A 4KB4A 2V6TA 3HOXC 3FKIA 3GEEA 5TJ3A 1L0WA 1WCMA 3DXJA 1ZXOA 5C3EK 4G7OA 3HXAA 3QX3A 3VA7A 4KARA 1O27A 3S1NC 2GSUA 4J3NA 1J6XA 4BLAA 1KQ4A 1WCMC 1TWGK 3GIRA 1XZPA 4U67S 3PO2K 2E2IK 2NVXA 3G4AA 3S1RC 5EGHA 3S16K 3DLLS 4GT9A 1TWGC 1SFOK 4WF9S 3PO2C 1J6VA 3S14C 2V6UA 2A6HA 3HKZL 4A3KK 1Y1WC 3GTPC 5M5XK 3K7AC 1I3QA 1X31C 1TWCA 1Y1VA 3RZDC 5DM7S 2VUMA 4IOCS 1BJTA 1VLOA 3IPJA 4Y7NC 4O2DA 4FM9A 4Y52K 4KMUA 1O24A 2WB1L 3S2DC 4OINA 3T02A 3H3VL 5C4JK 3I4NK 2JA7A 3GTQA 3OREA 2JH3A 4QIWD 5IORA 4KMDA 5C4JC 2XCOA 1ZVUA 3AH5A 1YNJA 5M3FK 3GTOC 2JA8K 4GTBA 3I4MK 1PJ6A 3N0CA 3GTJA 1VJEA 3Q3QA 5IYBK 3HOZC 2B63C 4KMAA 3S1QK 2R7ZA 4BXXC 4A3MC 4A3BC 3HOVC 4GTCA 4OIPA 4KM8A 3GEHA 3TFHA 5IYBC 1O26A 4BY1C 5FJ8K 1WQFA 4OIQA 3OEPA 3TFIA 4LOWA 1TWAA 2NVYK 4ZH4A 2WAQD 3GTGA 3GTMC 5IP9K 4WJ4A 2V6SA 2KWAA 3LPXA 1F93A 3PIPS 5EGEA 5C44K 4LK1A 2D6FC 3S15K 3M3YK 3FHZA 2A69A 5C4XC 2CW0A 5C44C 2E2HK 1BGWA 4C2MK 4QJVA 4Q4ZA 3M3YC 2Y0SD 4A3CC 5JVHS 4C3JK 3S1MK 2JA5C 2R92A 4G0UA 3S17K 2E2HC 1JOEA 1K83C 1USOA 3AQPA 4XSXA 1ZBSA 3S2HK 4C3JC 2E2JK 1EQRA 1JVIA 4RMFA 1I50K 4C3HC 2R93K 1TWFK 4BBRK 2NVTK 1HQMA 4DDQA 2PMZD 4Q5SA 4KDDA 2JA6K 2ZUEA 2EBBA 1TWHK 3H0GC 2GSNA 1XZQB 3TTGA 1WOPA 3GTLK 1I6VA 4YFKA 2ZJRS 2ZFZA 4A3FK 1BDFA 1YCLA 1TWGA 5C3EC 5E68A 5HL8A 5DM6S 4PAAA 4WCES 1O2BA 5HL7S 1O2FB 3TFJA 2ZJQS 4A3FC 3GTPA 1Y1WA 1WOOA 3GDZA 3GTKK 1O25A 4X6AK 1WIHA 3FKIK 4BY7K 2E2IC 4KMHA 4LLGA 2RGRA 4G0WA 3OPFA 3S16C 3PO3K 5L46A 4A3LK 1SFOC 3N0BA 1F7UA 4A3DK 5JFEA 1IS1A 4MQ9A 1IW7A 1R9TK 1O29A 4A3KC 3T00A 3FOEA 4A3JK 1IBAA 4A3LC 2W7VA 3HKZD 2NVXK 1INNA 1R9TC 3GTOA 5IYDK 4GZYA 4C45A 2RH6A 5CJ9A 4Y52C 2B63A 1I3QK 1YNNA 2FQOA 4LR2A 4AYBD 1EI6A 1F9NA 3I4NC 4QIWL 4WFNS 3JSTA 1Y1VK 2VUMK 5TMFA 1XXCA 3A8JA 1EFWA 4GTEA 4WJ3M 4AH6A 4A3EK 2JA8C 1DCOA 3I4MC 2PPBA
chains in the Genus database with same CATH topology
4A3JC 2CW0A 4G7OA 3RZDK 5C44C 2E2HK 4C2MK 3S1QC 2PA8D 4QJVA 4Q4ZA 2NVXC 2JA7K 3GTQK 3M3YC 3HOYK 2Y0SD 4A3IK 4A3CC 4XLPA 3CQZK 3S1NC 5IYCK 4C3JK 3S1MK 2JA5C 4Y7NK 5IYDC 3S17K 3M4OK 2E2HC 3S2DK 4XLNA 1WCMC 1K83C 2YU9K 2WB1D 5D4DA 1TWGK 1TWCK 5FLMK 3CQZC 4XSXA 3PO2K 2E2IK 4C3JC 3H3VD 3S2HK 3GTJK 1I3QC 4AYBL 2E2JK 3S1RC 1I50K 3WODA 4C3HC 3S16K 2YU9C 2R93K 2NVYC 1TWFK 4BBRK 1HQMA 1TWGC 2NVTK 1TWCC 2PMZD 2O5JA 2R7ZK 1Y1VC 4YFNA 4Q5SA 1SFOK 2VUMC 3PO2C 3S14C 5IP9C 3GTOK 4MEXA 4LJZA 2JA6K 2A6HA 1TWHK 3HOWK 3HKZL 4A3KK 1I6HK 1Y1WC 3H0GC 3GTPC 5M5XK 3K7AC 4A3EC 5IP7K 3S15C 3GTLK 1I6VA 4YFKA 2O5IA 4C3IK 3HOZK 2B63K 4A3FK 2BE5A 1BDFA 5M5YK 3RZOK 4BXXK 1ZYRA 5C3EC 4A3MK 4A3BK 3RZDC 2PA8L 3HOVK 4C2MC 2JA7C 2Y0SL 3GTQC 3HOYC 4A3IC 3GTGK 5IYCC 4A3FC 3S1MC 4LK0A 4YFXA 4Y7NC 4NOIA 4XSZA 4G7ZA 3GTKK 3S17C 3M4OC 4KMUA 4BY1K 4Y52K 2WB1L 3S2DC 5FLMC 4X6AK 4OINA 2WAQL 3H3VL 3FKIK 5C4JK 4BY7K 2E2IC 3S2HC 4JK1A 4LLGA 3GTJC 3I4NK 2E2JC 4QIWD 1I50C 3S16C 2NVQK 3GTMK 2PMZL 2R93C 1TWFC 4BBRC 2NVTC 2R7ZC 3PO3K 4A3GK 4G7HA 4OIRA 4A3LK 5C4JC 1SFOC 1YNJA 5M3FK 3GTOC 2R92K 2JA8K 2JA6C 4MQ9A 1XPPA 3I4MK 4A3DK 1IW7A 1R9TK 1TWHC 3HOWC 4A3KC 2NVQC 5C4XK 1I6HC 3HOXK 4A3GC 4MEYA 1TWAK 5IP7C 4A3JK 4A3LC 3GTLC 5IYBK 5M3MK 4C3IC 3HOZC 2B63C 3HKZD 3RZOC 2NVXK 3S1QK 4BXXC 4A3MC 4A3CK 1R9TC 4A3BC 3S1NK 3HOVC 4OIPA 1TWAC 2JA5K 5TMCA 5IYDK 4GZYA 3EQLA 5IYBC 1SMYA 3GTGC 4KN4A 5M5WK 1WCMK 1K83K 3HOUK 2A6EA 4BBSK 3GTKC 4Y52C 4BY1C 5FJ8K 4OIQA 1I3QK 1YNNA 4X6AC 3S1RK 4AYBD 3FKIC 4C3HK 4BY7C 3HOUC 2NVYK 4A93K 3I4NC 2A68A 4QIWL 4BBSC 4KN7A 1Y1VK 4QJVB 4ZH4A 2WAQD 5TMFA 2VUMK 3GTMC 5IP9K 3S14K 3PO3C 4OIOA 4YG2A 5C44K 1Y1WK 4LK1A 3H0GK 3GTPK 2R92C 4A93C 2JA8C 4A3DC 3K7AK 4A3EK 3I4MC 3M3YK 3S15K 2A69A 3HOXC 2PPBA 5C4XC 3DXJA 5C3EK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3J C;  2CW0 A;  4G7O A;  3RZD K;  5C44 C;  2E2H K;  4C2M K;  3S1Q C;  2PA8 D;  4QJV A;  4Q4Z A;  2NVX C;  2JA7 K;  3GTQ K;  3M3Y C;  3HOY K;  2Y0S D;  4A3I K;  4A3C C;  4XLP A;  3CQZ K;  3S1N C;  5IYC K;  4C3J K;  3S1M K;  2JA5 C;  4Y7N K;  5IYD C;  3S17 K;  3M4O K;  2E2H C;  3S2D K;  4XLN A;  1WCM C;  1K83 C;  2YU9 K;  2WB1 D;  5D4D A;  1TWG K;  1TWC K;  5FLM K;  3CQZ C;  4XSX A;  3PO2 K;  2E2I K;  4C3J C;  3H3V D;  3S2H K;  3GTJ K;  1I3Q C;  4AYB L;  2E2J K;  3S1R C;  1I50 K;  3WOD A;  4C3H C;  3S16 K;  2YU9 C;  2R93 K;  2NVY C;  1TWF K;  4BBR K;  1HQM A;  1TWG C;  2NVT K;  1TWC C;  2PMZ D;  2O5J A;  2R7Z K;  1Y1V C;  4YFN A;  4Q5S A;  1SFO K;  2VUM C;  3PO2 C;  3S14 C;  5IP9 C;  3GTO K;  4MEX A;  4LJZ A;  2JA6 K;  2A6H A;  1TWH K;  3HOW K;  3HKZ L;  4A3K K;  1I6H K;  1Y1W C;  3H0G C;  3GTP C;  5M5X K;  3K7A C;  4A3E C;  5IP7 K;  3S15 C;  3GTL K;  1I6V A;  4YFK A;  2O5I A;  4C3I K;  3HOZ K;  2B63 K;  4A3F K;  2BE5 A;  1BDF A;  5M5Y K;  3RZO K;  4BXX K;  1ZYR A;  5C3E C;  4A3M K;  4A3B K;  3RZD C;  2PA8 L;  3HOV K;  4C2M C;  2JA7 C;  2Y0S L;  3GTQ C;  3HOY C;  4A3I C;  3GTG K;  5IYC C;  4A3F C;  3S1M C;  4LK0 A;  4YFX A;  4Y7N C;  4NOI A;  4XSZ A;  4G7Z A;  3GTK K;  3S17 C;  3M4O C;  4KMU A;  4BY1 K;  4Y52 K;  2WB1 L;  3S2D C;  5FLM C;  4X6A K;  4OIN A;  2WAQ L;  3H3V L;  3FKI K;  5C4J K;  4BY7 K;  2E2I C;  3S2H C;  4JK1 A;  4LLG A;  3GTJ C;  3I4N K;  2E2J C;  4QIW D;  1I50 C;  3S16 C;  2NVQ K;  3GTM K;  2PMZ L;  2R93 C;  1TWF C;  4BBR C;  2NVT C;  2R7Z C;  3PO3 K;  4A3G K;  4G7H A;  4OIR A;  4A3L K;  5C4J C;  1SFO C;  1YNJ A;  5M3F K;  3GTO C;  2R92 K;  2JA8 K;  2JA6 C;  4MQ9 A;  1XPP A;  3I4M K;  4A3D K;  1IW7 A;  1R9T K;  1TWH C;  3HOW C;  4A3K C;  2NVQ C;  5C4X K;  1I6H C;  3HOX K;  4A3G C;  4MEY A;  1TWA K;  5IP7 C;  4A3J K;  4A3L C;  3GTL C;  5IYB K;  5M3M K;  4C3I C;  3HOZ C;  2B63 C;  3HKZ D;  3RZO C;  2NVX K;  3S1Q K;  4BXX C;  4A3M C;  4A3C K;  1R9T C;  4A3B C;  3S1N K;  3HOV C;  4OIP A;  1TWA C;  2JA5 K;  5TMC A;  5IYD K;  4GZY A;  3EQL A;  5IYB C;  1SMY A;  3GTG C;  4KN4 A;  5M5W K;  1WCM K;  1K83 K;  3HOU K;  2A6E A;  4BBS K;  3GTK C;  4Y52 C;  4BY1 C;  5FJ8 K;  4OIQ A;  1I3Q K;  1YNN A;  4X6A C;  3S1R K;  4AYB D;  3FKI C;  4C3H K;  4BY7 C;  3HOU C;  2NVY K;  4A93 K;  3I4N C;  2A68 A;  4QIW L;  4BBS C;  4KN7 A;  1Y1V K;  4QJV B;  4ZH4 A;  2WAQ D;  5TMF A;  2VUM K;  3GTM C;  5IP9 K;  3S14 K;  3PO3 C;  4OIO A;  4YG2 A;  5C44 K;  1Y1W K;  4LK1 A;  3H0G K;  3GTP K;  2R92 C;  4A93 C;  2JA8 C;  4A3D C;  3K7A K;  4A3E K;  3I4M C;  3M3Y K;  3S15 K;  2A69 A;  3HOX C;  2PPB A;  5C4X C;  3DXJ A;  5C3E K; 
#chains in the Genus database with same CATH topology
 3GTM A;  3S1Q C;  2PA8 D;  1VH2 A;  2JA7 K;  3GTQ K;  1C0A A;  3HOY K;  4A3I K;  3CQZ K;  4XLP A;  5IYC K;  1EH1 A;  4P9S A;  5CHP A;  3M4O K;  1G51 A;  4XLN A;  2YU9 K;  5FLM K;  3CQZ C;  3LAP A;  3GTJ K;  1BS2 A;  4GTD A;  3L4J A;  2YU9 C;  2NVY C;  2JA5 A;  2R7Z K;  3T01 A;  3SZY A;  2O5J A;  2CFA A;  3V4G A;  4GTL A;  2E2H A;  5IP9 C;  1K83 A;  2PHC B;  3HOW K;  1XXA A;  1I6H K;  4BLB A;  5IP7 K;  3S15 C;  2O5I A;  4C3I K;  3RZO K;  2BE5 A;  4KAT A;  1ZYR A;  3ADA C;  3MML B;  4GFQ A;  4C2M C;  2Y0S L;  4KAW X;  1I50 A;  3GTG K;  3S1M C;  3H0G A;  4YFX A;  1PJ5 A;  1RU0 A;  4WFB S;  4NOI A;  4G7Z A;  3S17 C;  2GAH C;  2KPU A;  1WQH A;  2Y3P A;  1J6W A;  1V5V A;  1GE9 A;  4BKW A;  3S2H C;  3A8I A;  2E2J C;  3AD7 C;  1I50 C;  3PIO S;  4XCH A;  2PMZ L;  2R93 C;  1TWF C;  4BBR C;  2NVT C;  3AD8 C;  4A3G K;  4G7H A;  4OIR A;  1ZQ1 C;  1WQG A;  2R92 K;  2JA6 C;  1XPP A;  1WOS A;  1TWH C;  3HOX K;  4KAS A;  2E2I A;  4A3G C;  4MEY A;  4G0V A;  1YX2 A;  1J98 A;  3GTL C;  2XCR B;  5IOT A;  1USM A;  3BP3 A;  3S1N K;  1SFO A;  3BP8 C;  1SMY A;  4KN4 A;  1IE0 A;  1WCM K;  3HOU K;  2A6E A;  4BBS K;  3GTK C;  3L4K A;  1DCH A;  4X6A C;  3S1R K;  3FKI C;  1R9T A;  4BY7 C;  3HOU C;  2FQT A;  4BBS C;  3ERE D;  4KB2 A;  3S14 K;  3PO3 C;  2GSO A;  4OIO A;  4YG2 A;  1Y1W K;  3GTP K;  3LAJ A;  4A3D C;  3K7A K;  1WSR A;  1JQW A;  1XZP B;  4A3J C;  3RZD K;  4GTF A;  3N3Y A;  2P5M A;  2NVX C;  5IOS A;  3AQO A;  4Y7N K;  5IYD C;  3G4C A;  1B4A A;  3S2D K;  2WB1 D;  5D4D A;  1TWC K;  1VGX A;  3H3V D;  1PJ7 A;  1I3Q C;  4AYB L;  4WIL A;  3WOD A;  1F7V A;  2L3U A;  1TWC C;  4P5B A;  1Y1V C;  4YFN A;  4IOA S;  2VUM C;  1O28 A;  3FOF A;  3GTO K;  4MEX A;  1FEU A;  4LJZ A;  3SZZ A;  5JVO A;  3CQZ A;  4IO9 S;  4A3E C;  2KXY A;  4P5A A;  3CAG A;  3HOZ K;  2B63 K;  2YU9 A;  5M5Y K;  2NVY A;  2ZJP S;  2L5N A;  3AD9 C;  4A3M K;  4BXX K;  4LQY A;  4A3B K;  5IOQ A;  2PA8 L;  3HOV K;  2JA7 C;  3A8K A;  3GTQ C;  2GAG C;  3HOY C;  4A3I C;  5IYC C;  2XCQ A;  4LK0 A;  3GSI A;  4GTA A;  4XSZ A;  3LYW A;  3M4O C;  4BY1 K;  3NUH A;  5FLM C;  2WAQ L;  4JK1 A;  3GTJ C;  1AB4 A;  1ISE A;  4WFA S;  5JVG S;  2NVQ K;  3GTM K;  1EK8 A;  2R7Z C;  3S0X A;  1B4B A;  1IL2 A;  3HOW C;  5C4X K;  2NVQ C;  1I6H C;  1TWA K;  5IP7 C;  1IQ0 A;  1VRQ C;  5M3M K;  4KC6 A;  4C3I C;  3RZO C;  3BUE A;  3GEI A;  2KQ1 A;  4FZB A;  1TWF A;  4M1X A;  2R93 A;  4A3C K;  1XZQ A;  1O2A A;  2ZUF A;  1TWA C;  2JA5 K;  1WOR A;  4PAB A;  5TMC A;  2JA6 A;  1XXB A;  1DCP A;  3EQL A;  4ILD A;  1WSV A;  3GTG C;  1UV7 A;  1TWH A;  5M5W K;  1K83 K;  3GTL A;  2CFA B;  3CF5 S;  4C3H K;  5HQH A;  4A93 K;  2A68 A;  4KN7 A;  4QJV B;  2P8T A;  1DD5 A;  4KM9 A;  3GTK A;  3H0G K;  2R92 C;  4A93 C;  1HI9 A;  4KB4 A;  2V6T A;  3HOX C;  3FKI A;  3GEE A;  5TJ3 A;  1L0W A;  1WCM A;  3DXJ A;  1ZXO A;  5C3E K;  4G7O A;  3HXA A;  3QX3 A;  3VA7 A;  4KAR A;  1O27 A;  3S1N C;  2GSU A;  4J3N A;  1J6X A;  4BLA A;  1KQ4 A;  1WCM C;  1TWG K;  3GIR A;  1XZP A;  4U67 S;  3PO2 K;  2E2I K;  2NVX A;  3G4A A;  3S1R C;  5EGH A;  3S16 K;  3DLL S;  4GT9 A;  1TWG C;  1SFO K;  4WF9 S;  3PO2 C;  1J6V A;  3S14 C;  2V6U A;  2A6H A;  3HKZ L;  4A3K K;  1Y1W C;  3GTP C;  5M5X K;  3K7A C;  1I3Q A;  1X31 C;  1TWC A;  1Y1V A;  3RZD C;  5DM7 S;  2VUM A;  4IOC S;  1BJT A;  1VLO A;  3IPJ A;  4Y7N C;  4O2D A;  4FM9 A;  4Y52 K;  4KMU A;  1O24 A;  2WB1 L;  3S2D C;  4OIN A;  3T02 A;  3H3V L;  5C4J K;  3I4N K;  2JA7 A;  3GTQ A;  3ORE A;  2JH3 A;  4QIW D;  5IOR A;  4KMD A;  5C4J C;  2XCO A;  1ZVU A;  3AH5 A;  1YNJ A;  5M3F K;  3GTO C;  2JA8 K;  4GTB A;  3I4M K;  1PJ6 A;  3N0C A;  3GTJ A;  1VJE A;  3Q3Q A;  5IYB K;  3HOZ C;  2B63 C;  4KMA A;  3S1Q K;  2R7Z A;  4BXX C;  4A3M C;  4A3B C;  3HOV C;  4GTC A;  4OIP A;  4KM8 A;  3GEH A;  3TFH A;  5IYB C;  1O26 A;  4BY1 C;  5FJ8 K;  1WQF A;  4OIQ A;  3OEP A;  3TFI A;  4LOW A;  1TWA A;  2NVY K;  4ZH4 A;  2WAQ D;  3GTG A;  3GTM C;  5IP9 K;  4WJ4 A;  2V6S A;  2KWA A;  3LPX A;  1F93 A;  3PIP S;  5EGE A;  5C44 K;  4LK1 A;  2D6F C;  3S15 K;  3M3Y K;  3FHZ A;  2A69 A;  5C4X C;  2CW0 A;  5C44 C;  2E2H K;  1BGW A;  4C2M K;  4QJV A;  4Q4Z A;  3M3Y C;  2Y0S D;  4A3C C;  5JVH S;  4C3J K;  3S1M K;  2JA5 C;  2R92 A;  4G0U A;  3S17 K;  2E2H C;  1JOE A;  1K83 C;  1USO A;  3AQP A;  4XSX A;  1ZBS A;  3S2H K;  4C3J C;  2E2J K;  1EQR A;  1JVI A;  4RMF A;  1I50 K;  4C3H C;  2R93 K;  1TWF K;  4BBR K;  2NVT K;  1HQM A;  4DDQ A;  2PMZ D;  4Q5S A;  4KDD A;  2JA6 K;  2ZUE A;  2EBB A;  1TWH K;  3H0G C;  2GSN A;  1XZQ B;  3TTG A;  1WOP A;  3GTL K;  1I6V A;  4YFK A;  2ZJR S;  2ZFZ A;  4A3F K;  1BDF A;  1YCL A;  1TWG A;  5C3E C;  5E68 A;  5HL8 A;  5DM6 S;  4PAA A;  4WCE S;  1O2B A;  5HL7 S;  1O2F B;  3TFJ A;  2ZJQ S;  4A3F C;  3GTP A;  1Y1W A;  1WOO A;  3GDZ A;  3GTK K;  1O25 A;  4X6A K;  1WIH A;  3FKI K;  4BY7 K;  2E2I C;  4KMH A;  4LLG A;  2RGR A;  4G0W A;  3OPF A;  3S16 C;  3PO3 K;  5L46 A;  4A3L K;  1SFO C;  3N0B A;  1F7U A;  4A3D K;  5JFE A;  1IS1 A;  4MQ9 A;  1IW7 A;  1R9T K;  1O29 A;  4A3K C;  3T00 A;  3FOE A;  4A3J K;  1IBA A;  4A3L C;  2W7V A;  3HKZ D;  2NVX K;  1INN A;  1R9T C;  3GTO A;  5IYD K;  4GZY A;  4C45 A;  2RH6 A;  5CJ9 A;  4Y52 C;  2B63 A;  1I3Q K;  1YNN A;  2FQO A;  4LR2 A;  4AYB D;  1EI6 A;  1F9N A;  3I4N C;  4QIW L;  4WFN S;  3JST A;  1Y1V K;  2VUM K;  5TMF A;  1XXC A;  3A8J A;  1EFW A;  4GTE A;  4WJ3 M;  4AH6 A;  4A3E K;  2JA8 C;  1DCO A;  3I4M C;  2PPB A; 
#chains in the Genus database with same CATH homology
 4A3J C;  2CW0 A;  4G7O A;  3RZD K;  5C44 C;  2E2H K;  4C2M K;  3S1Q C;  2PA8 D;  4QJV A;  4Q4Z A;  2NVX C;  2JA7 K;  3GTQ K;  3M3Y C;  3HOY K;  2Y0S D;  4A3I K;  4A3C C;  4XLP A;  3CQZ K;  3S1N C;  5IYC K;  4C3J K;  3S1M K;  2JA5 C;  4Y7N K;  5IYD C;  3S17 K;  3M4O K;  2E2H C;  3S2D K;  4XLN A;  1WCM C;  1K83 C;  2YU9 K;  2WB1 D;  5D4D A;  1TWG K;  1TWC K;  5FLM K;  3CQZ C;  4XSX A;  3PO2 K;  2E2I K;  4C3J C;  3H3V D;  3S2H K;  3GTJ K;  1I3Q C;  4AYB L;  2E2J K;  3S1R C;  1I50 K;  3WOD A;  4C3H C;  3S16 K;  2YU9 C;  2R93 K;  2NVY C;  1TWF K;  4BBR K;  1HQM A;  1TWG C;  2NVT K;  1TWC C;  2PMZ D;  2O5J A;  2R7Z K;  1Y1V C;  4YFN A;  4Q5S A;  1SFO K;  2VUM C;  3PO2 C;  3S14 C;  5IP9 C;  3GTO K;  4MEX A;  4LJZ A;  2JA6 K;  2A6H A;  1TWH K;  3HOW K;  3HKZ L;  4A3K K;  1I6H K;  1Y1W C;  3H0G C;  3GTP C;  5M5X K;  3K7A C;  4A3E C;  5IP7 K;  3S15 C;  3GTL K;  1I6V A;  4YFK A;  2O5I A;  4C3I K;  3HOZ K;  2B63 K;  4A3F K;  2BE5 A;  1BDF A;  5M5Y K;  3RZO K;  4BXX K;  1ZYR A;  5C3E C;  4A3M K;  4A3B K;  3RZD C;  2PA8 L;  3HOV K;  4C2M C;  2JA7 C;  2Y0S L;  3GTQ C;  3HOY C;  4A3I C;  3GTG K;  5IYC C;  4A3F C;  3S1M C;  4LK0 A;  4YFX A;  4Y7N C;  4NOI A;  4XSZ A;  4G7Z A;  3GTK K;  3S17 C;  3M4O C;  4KMU A;  4BY1 K;  4Y52 K;  2WB1 L;  3S2D C;  5FLM C;  4X6A K;  4OIN A;  2WAQ L;  3H3V L;  3FKI K;  5C4J K;  4BY7 K;  2E2I C;  3S2H C;  4JK1 A;  4LLG A;  3GTJ C;  3I4N K;  2E2J C;  4QIW D;  1I50 C;  3S16 C;  2NVQ K;  3GTM K;  2PMZ L;  2R93 C;  1TWF C;  4BBR C;  2NVT C;  2R7Z C;  3PO3 K;  4A3G K;  4G7H A;  4OIR A;  4A3L K;  5C4J C;  1SFO C;  1YNJ A;  5M3F K;  3GTO C;  2R92 K;  2JA8 K;  2JA6 C;  4MQ9 A;  1XPP A;  3I4M K;  4A3D K;  1IW7 A;  1R9T K;  1TWH C;  3HOW C;  4A3K C;  2NVQ C;  5C4X K;  1I6H C;  3HOX K;  4A3G C;  4MEY A;  1TWA K;  5IP7 C;  4A3J K;  4A3L C;  3GTL C;  5IYB K;  5M3M K;  4C3I C;  3HOZ C;  2B63 C;  3HKZ D;  3RZO C;  2NVX K;  3S1Q K;  4BXX C;  4A3M C;  4A3C K;  1R9T C;  4A3B C;  3S1N K;  3HOV C;  4OIP A;  1TWA C;  2JA5 K;  5TMC A;  5IYD K;  4GZY A;  3EQL A;  5IYB C;  1SMY A;  3GTG C;  4KN4 A;  5M5W K;  1WCM K;  1K83 K;  3HOU K;  2A6E A;  4BBS K;  3GTK C;  4Y52 C;  4BY1 C;  5FJ8 K;  4OIQ A;  1I3Q K;  1YNN A;  4X6A C;  3S1R K;  4AYB D;  3FKI C;  4C3H K;  4BY7 C;  3HOU C;  2NVY K;  4A93 K;  3I4N C;  2A68 A;  4QIW L;  4BBS C;  4KN7 A;  1Y1V K;  4QJV B;  4ZH4 A;  2WAQ D;  5TMF A;  2VUM K;  3GTM C;  5IP9 K;  3S14 K;  3PO3 C;  4OIO A;  4YG2 A;  5C44 K;  1Y1W K;  4LK1 A;  3H0G K;  3GTP K;  2R92 C;  4A93 C;  2JA8 C;  4A3D C;  3K7A K;  4A3E K;  3I4M C;  3M3Y K;  3S15 K;  2A69 A;  3HOX C;  2PPB A;  5C4X C;  3DXJ A;  5C3E K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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