5C3EC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 52
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c3eC01
3HKZL 5C4XK 4A3BK 4ZH4A 3S1QK 5D4DA 1YNJA 5FLMC 5TMCA 1SMYA 5FLMK 2A69A 4A3FK 4BBSK 4BY1C 1K83C 4BY1K 4YFKA 2E2HC 2JA5K 5IP9K 4XSXA 3H3VD 1YNNA 1SFOC 4A3DC 5C4JC 3S15C 4XLNA 4KMUA 3GTOC 2R93C 4A3DK 2R93K 1TWGC 4C3IK 3I4NC 3H3VL 5M5XK 4A3CC 4A3KK 3HOXC 2E2JK 4KN7A 4Y7NK 2CW0A 1TWHK 1IW7A 2O5IA 5M5WK 3GTLK 2O5JA 5IP7C 3HOYC 4LK1A 4BBSC 5C4XC 3HOYK 3HOVC 4A3IC 4A3BC 4C3JC 4BY7C 2NVTK 2NVQK 3HOVK 3S1QC 4A3IK 4C3JK 5M5YK 2NVXK 4BY7K 4A3FC 3I4MK 3S2HC 4A3EC 3S16C 4A3MC 4A3JK 3GTJC 3S2HK 2JA5C 5C3EC 4A3EK 3WODA 4G7HA 5IP9C 3GTJK 4A3MK 5C3EK 3S16K 2R92C 4MQ9A 4OIRA 2R92K 2JA6C 4YFXA 2JA6K 3DXJA 4MEYA 1HQMA 4C3HC 3S1RC 4C3IC 4MEXA 4C3HK 3S1RK 3HOZC 3PO2C 4QJVA 4A93C 4A3KC 4X6AK 2NVYC 3HOZK 3PO2K 4A93K 4Q5SA 2VUMK 2E2JC 4AYBD 4G7OA 4Y7NC 1I3QK 1XPPA 2NVYK 2WAQD 4A3GC 1TWHC 3GTLC 4BXXC 5M3FK 4XLPA 4A3GK 4BXXK 3GTMC 4OINA 1R9TK 4LLGA 3H0GK 3GTMK 1I6HK 4AYBL 2NVQC 4Y52K 2NVTC 4QJVB 4JK1A 2WAQL 5FJ8K 2NVXC 1Y1WK 3GTGK 3RZOK 1Y1VC 4LJZA 5IP7K 2YU9K 3I4MC 1Y1VK 3K7AC 4YG2A 1TWCC 4A3JC 3K7AK 1TWCK 5IYDK 5IYBC 1WCMC 1I6VA 4LK0A 5TMFA 5IYBK 1WCMK 3M4OK 3CQZK 2E2IK 4YFNA 3GTPK 2A6EA 4OIQA 4NOIA 2B63K 2JA7K 3S17K 3S1NK 4X6AC 1BDFA 4C2MC 4G7ZA 2VUMC 4C2MK 1I3QC 1I50C 3GTQC 1I50K 1TWAC 1ZYRA 3GTQK 1R9TC 1TWAK 4A3LC 3S1MK 3H0GC 3FKIC 3S14C 4A3LK 2A68A 4OIOA 2PPBA 3S2DC 4KN4A 4Y52C 2WB1D 1I6HC 3FKIK 1TWFC 3S14K 3S2DK 2JA8C 1TWFK 3RZDC 5C44C 1Y1WC 3GTGC 3RZOC 4GZYA 5M3MK 2YU9C 5C44K 3RZDK 1K83K 2JA8K 3HOUC 4Q4ZA 2WB1L 2E2HK 2BE5A 2PMZD 2PA8D 3HOUK 3PO3C 5IYCC 5IYDC 3PO3K 2A6HA 5IYCK 2Y0SD 1SFOK 3M4OC 5C4JK 3S15K 3EQLA 3CQZC 4QIWD 3GTOK 2PMZL 2E2IC 3M3YC 3GTPC 2PA8L 1TWGK 2JA7C 2B63C 3I4NK 4BBRC 3M3YK 3S17C 3S1NC 4A3CK 4XSZA 4BBRK 3HKZD 2Y0SL 3HOXK 4OIPA 2R7ZC 4QIWL 3HOWC 2R7ZK 3HOWK 3GTKC 3S1MC 3GTKK
chains in the Genus database with same CATH superfamily
1IL2A 2L3UA 2P8TA 4GTEA 3S1QK 4WJ3M 5TMCA 4O2DA 5FLMK 3GTQA 4BY1C 4BLAA 1KQ4A 4YFKA 2P5MA 1XXCA 4KMUA 2EBBA 2R93K 2ZJPS 4C3IK 5JVGS 1J6XA 1F93A 4A3KK 4IOCS 4G0VA 1B4BA 1TWHK 2O5IA 1PJ7A 4KATA 5C4XC 3HOYK 3HOVC 4A3IC 3TTGA 3TFIA 1J6WA 1EI6A 3GTKA 4A3EC 4A3MC 1JOEA 3GTJC 2ZUEA 2JA5C 4LQYA 5CHPA 3T02A 2JA6K 3S1RK 4C45A 4X6AK 4GTBA 4A93K 4FM9A 4Y7NC 4KB2A 4KMDA 4A3GC 3GTOA 5M3FK 4BXXK 1TWGA 4BKWA 1INNA 2GSUA 2NVTC 1PJ6A 1ISEA 4U67S 1Y1VC 4LJZA 3I4MC 1FEUA 2XCRB 3K7AC 3T00A 4YG2A 5HQHA 3BUEA 1XXAA 1XZPA 1WCMC 5IYBK 1O2BA 4KDDA 1UV7A 2A6EA 5CJ9A 2R92A 2VUMC 1XZPB 3GEEA 1I50K 1TWAC 3OEPA 3S1MK 3H0GC 3FKIC 1YCLA 4A3LK 3S2DC 1I6HC 4Y52C 1DCHA 3RZOC 2JA8K 3GTLA 5M3MK 1X31C 4WFNS 3CF5S 1K83K 3GTMA 3HOUC 4Q4ZA 2E2HK 2BE5A 3ADAC 1WQGA 5IYDC 2NVXA 2L5NA 2Y0SD 3S15K 3GTOK 3AD7C 3GTPC 1TWCA 1TWGK 3AH5A 4WCES 2JA7C 3I4NK 3M3YK 3S17C 3SZYA 4A3CK 2Y0SL 1EK8A 3TFHA 4OIPA 3HOWC 3GTPA 5FLMC 1V5VA 4AH6A 4A3FK 5IP9K 1F7VA 1TWFA 4GTLA 2V6TA 3GTGA 5C4JC 4XLNA 4A3DK 2R93C 3N3YA 1J6VA 3HOXC 2KQ1A 2CW0A 3CQZA 3GTLK 3AQOA 2O5JA 5IP7C 3HOYC 4LK1A 4BBSC 1G51A 4A3BC 4GTFA 3TFJA 2R7ZA 5M5YK 4BY7K 2PHCB 2NVXK 1XXBA 1USOA 4A3JK 3S2HK 3OREA 3WODA 4G7HA 2XCOA 5C3EK 2JA6C 4IO9S 1DCPA 3DXJA 4MEYA 3S1RC 3LAJA 4C3HK 4QJVA 4A93C 3HOZK 3PO2K 2E2JC 4AYBD 2NVYK 3GEHA 1EFWA 1XPPA 4BXXC 4XLPA 4LLGA 5E68A 4AYBL 2NVQC 4QJVB 4G0UA 1O25A 3GTGK 3AQPA 1VH2A 5IYBC 3S0XA 3M4OK 3CQZK 5IORA 2E2IK 4YFNA 3GTJA 2JA5A 3S1NK 2KWAA 3GIRA 1I3QC 1I50C 1WQFA 1O2AA 1O26A 4PAAA 1ZYRA 3GTQK 1R9TC 4A3LC 2JA8C 2KXYA 2JH3A 1Y1WC 4GZYA 1R9TA 2YU9C 4LR2A 2ZFZA 3Q3QA 2PMZD 4WFAS 1Y1WA 3PO3K 1WSRA 2YU9A 5IYCK 1Y1VA 3V4GA 4QIWD 2PMZL 3M3YC 2B63C 4BBRK 3HKZD 1WCMA 4QIWL 4GT9A 3GTKK 3HKZL 1HI9A 5C4XK 2VUMA 4KAWX 5D4DA 1TWAA 3H0GA 3FKIA 3G4CA 4G0WA 4GTCA 2JA5K 3PIOS 4XSXA 3H3VD 4WILA 1YNNA 1SFOC 4A3DC 3NUHA 3DLLS 1WOPA 1ZVUA 3H3VL 5M5XK 1SFOA 2CFAA 4Y7NK 3SZZA 4ILDA 5DM6S 2JA7A 5HL7S 1BJTA 4BY7C 2NVTK 3S1QC 1WSVA 4C3JK 2CFAB 3OPFA 3I4MK 3S2HC 4P9SA 4KARA 1USMA 5C3EC 3S16K 3AD8C 4OIRA 2R92K 1DCOA 4YFXA 1JVIA 4C3HC 1HQMA 4C3IC 3HOZC 3PO2C 5JVOA 4KM8A 4A3KC 2NVYC 3N0BA 4Q5SA 1L0WA 2VUMK 4LOWA 1YX2A 2WAQD 1TWHC 2R93A 5JFEA 4XCHA 4OINA 3H0GK 3GTMK 1JQWA 1I6HK 4Y52K 4GTAA 2WAQL 5FJ8K 3RZOK 4KMHA 4KMAA 1WOSA 2ZJRS 2XCQA 1TWCK 4GFQA 1AB4A 1GE9A 5IYDK 4WJ4A 1BS2A 1I6VA 1EH1A 3GTPK 4OIQA 2JA7K 4NOIA 4GTDA 3S17K 4X6AC 1BDFA 1VLOA 4C2MK 2JA6A 1O27A 1O2FB 3GTQC 2RGRA 3A8JA 2A68A 2PPBA 1F9NA 3L4JA 3ERED 3S14K 2WB1D 1B4AA 1TWFK 3RZDK 5C44K 3MMLB 2WB1L 4KB4A 3VA7A 3PO3C 4WF9S 5IYCC 4PABA 2FQOA 5C4JK 3EQLA 4BBRC 3HOXK 3LPXA 2R7ZK 2GAHC 1F7UA 3A8IA 3GTKC 3S1MC 5IP7K 4BBSK 5IOQA 1WOOA 3BP8C 1WQHA 4A3BK 4ZH4A 4KM9A 1YNJA 1I3QA 1I50A 1SMYA 2A69A 3IPJA 1K83C 1RU0A 3T01A 4BY1K 2E2HC 2ZJQS 1ZBSA 3GSIA 2GAGC 5L46A 1K83A 4DDQA 1IE0A 4P5AA 3S15C 3GTOC 2E2HA 1IQ0A 5EGEA 1TWGC 4IOAS 3I4NC 5HL8A 4A3CC 3FOEA 5EGHA 2E2JK 4KN7A 1PJ5A 4KASA 4BLBA 1ZQ1C 1IW7A 3AD9C 5M5WK 2B63A 3JSTA 2D6FC 2NVQK 4C3JC 4M1XA 3HOVK 4A3IK 4A3FC 1DD5A 1ZXOA 1EQRA 3S16C 4P5BA 4A3EK 4A3MK 5IP9C 2W7VA 3GTJK 3BP3A 2R92C 4MQ9A 2V6SA 3QX3A 4MEXA 2ZUFA 1XZQA 2RH6A 2FQTA 4J3NA 2Y3PA 4G7OA 1I3QK 3GTLC 5IOSA 4A3GK 3GTMC 1R9TK 1XZQB 4JK1A 3GEIA 2NVXC 1Y1WK 3L4KA 2YU9K 1VJEA 1Y1VK 1TWCC 4A3JC 1O28A 3K7AK 2KPUA 1BGWA 3CAGA 4RMFA 4LK0A 5TMFA 3LAPA 1WCMK 3N0CA 5TJ3A 2B63K 4C2MC 4G7ZA 2GSNA 3FHZA 1C0AA 1TWAK 1IS1A 1J98A 3S14C 2GSOA 4OIOA 3FKIK 2NVYA 4KN4A 3FOFA 1IBAA 1TWFC 3S2DK 3PIPS 4FZBA 3RZDC 5C44C 3GTGC 1TWHA 1O29A 3GDZA 2V6UA 3A8KA 2PA8D 3HOUK 2A6HA 5JVHS 5IOTA 1SFOK 3M4OC 3CQZC 5DM7S 4KC6A 2E2IC 2PA8L 1WORA 4WFBS 3S1NC 4XSZA 1VGXA 3G4AA 2R7ZC 3LYWA 1VRQC 3HXAA 2E2IA 3HOWK 1WIHA 1O24A
chains in the Genus database with same CATH topology
3HKZL 5C4XK 4A3BK 4ZH4A 3S1QK 5D4DA 1YNJA 5FLMC 5TMCA 1SMYA 5FLMK 2A69A 4A3FK 4BBSK 4BY1C 1K83C 4BY1K 4YFKA 2E2HC 2JA5K 5IP9K 4XSXA 3H3VD 1YNNA 1SFOC 4A3DC 5C4JC 3S15C 4XLNA 4KMUA 3GTOC 2R93C 4A3DK 2R93K 1TWGC 4C3IK 3I4NC 3H3VL 5M5XK 4A3CC 4A3KK 3HOXC 2E2JK 4KN7A 4Y7NK 2CW0A 1TWHK 1IW7A 2O5IA 5M5WK 3GTLK 2O5JA 5IP7C 3HOYC 4LK1A 4BBSC 5C4XC 3HOYK 3HOVC 4A3IC 4A3BC 4C3JC 4BY7C 2NVTK 2NVQK 3HOVK 3S1QC 4A3IK 4C3JK 5M5YK 2NVXK 4BY7K 4A3FC 3I4MK 3S2HC 4A3EC 3S16C 4A3MC 4A3JK 3GTJC 3S2HK 2JA5C 5C3EC 4A3EK 3WODA 4G7HA 5IP9C 3GTJK 4A3MK 5C3EK 3S16K 2R92C 4MQ9A 4OIRA 2R92K 2JA6C 4YFXA 2JA6K 3DXJA 4MEYA 1HQMA 4C3HC 3S1RC 4C3IC 4MEXA 4C3HK 3S1RK 3HOZC 3PO2C 4QJVA 4A93C 4A3KC 4X6AK 2NVYC 3HOZK 3PO2K 4A93K 4Q5SA 2VUMK 2E2JC 4AYBD 4G7OA 4Y7NC 1I3QK 1XPPA 2NVYK 2WAQD 4A3GC 1TWHC 3GTLC 4BXXC 5M3FK 4XLPA 4A3GK 4BXXK 3GTMC 4OINA 1R9TK 4LLGA 3H0GK 3GTMK 1I6HK 4AYBL 2NVQC 4Y52K 2NVTC 4QJVB 4JK1A 2WAQL 5FJ8K 2NVXC 1Y1WK 3GTGK 3RZOK 1Y1VC 4LJZA 5IP7K 2YU9K 3I4MC 1Y1VK 3K7AC 4YG2A 1TWCC 4A3JC 3K7AK 1TWCK 5IYDK 5IYBC 1WCMC 1I6VA 4LK0A 5TMFA 5IYBK 1WCMK 3M4OK 3CQZK 2E2IK 4YFNA 3GTPK 2A6EA 4OIQA 4NOIA 2B63K 2JA7K 3S17K 3S1NK 4X6AC 1BDFA 4C2MC 4G7ZA 2VUMC 4C2MK 1I3QC 1I50C 3GTQC 1I50K 1TWAC 1ZYRA 3GTQK 1R9TC 1TWAK 4A3LC 3S1MK 3H0GC 3FKIC 3S14C 4A3LK 2A68A 4OIOA 2PPBA 3S2DC 4KN4A 4Y52C 2WB1D 1I6HC 3FKIK 1TWFC 3S14K 3S2DK 2JA8C 1TWFK 3RZDC 5C44C 1Y1WC 3GTGC 3RZOC 4GZYA 5M3MK 2YU9C 5C44K 3RZDK 1K83K 2JA8K 3HOUC 4Q4ZA 2WB1L 2E2HK 2BE5A 2PMZD 2PA8D 3HOUK 3PO3C 5IYCC 5IYDC 3PO3K 2A6HA 5IYCK 2Y0SD 1SFOK 3M4OC 5C4JK 3S15K 3EQLA 3CQZC 4QIWD 3GTOK 2PMZL 2E2IC 3M3YC 3GTPC 2PA8L 1TWGK 2JA7C 2B63C 3I4NK 4BBRC 3M3YK 3S17C 3S1NC 4A3CK 4XSZA 4BBRK 3HKZD 2Y0SL 3HOXK 4OIPA 2R7ZC 4QIWL 3HOWC 2R7ZK 3HOWK 3GTKC 3S1MC 3GTKK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HKZ L;  5C4X K;  4A3B K;  4ZH4 A;  3S1Q K;  5D4D A;  1YNJ A;  5FLM C;  5TMC A;  1SMY A;  5FLM K;  2A69 A;  4A3F K;  4BBS K;  4BY1 C;  1K83 C;  4BY1 K;  4YFK A;  2E2H C;  2JA5 K;  5IP9 K;  4XSX A;  3H3V D;  1YNN A;  1SFO C;  4A3D C;  5C4J C;  3S15 C;  4XLN A;  4KMU A;  3GTO C;  2R93 C;  4A3D K;  2R93 K;  1TWG C;  4C3I K;  3I4N C;  3H3V L;  5M5X K;  4A3C C;  4A3K K;  3HOX C;  2E2J K;  4KN7 A;  4Y7N K;  2CW0 A;  1TWH K;  1IW7 A;  2O5I A;  5M5W K;  3GTL K;  2O5J A;  5IP7 C;  3HOY C;  4LK1 A;  4BBS C;  5C4X C;  3HOY K;  3HOV C;  4A3I C;  4A3B C;  4C3J C;  4BY7 C;  2NVT K;  2NVQ K;  3HOV K;  3S1Q C;  4A3I K;  4C3J K;  5M5Y K;  2NVX K;  4BY7 K;  4A3F C;  3I4M K;  3S2H C;  4A3E C;  3S16 C;  4A3M C;  4A3J K;  3GTJ C;  3S2H K;  2JA5 C;  5C3E C;  4A3E K;  3WOD A;  4G7H A;  5IP9 C;  3GTJ K;  4A3M K;  5C3E K;  3S16 K;  2R92 C;  4MQ9 A;  4OIR A;  2R92 K;  2JA6 C;  4YFX A;  2JA6 K;  3DXJ A;  4MEY A;  1HQM A;  4C3H C;  3S1R C;  4C3I C;  4MEX A;  4C3H K;  3S1R K;  3HOZ C;  3PO2 C;  4QJV A;  4A93 C;  4A3K C;  4X6A K;  2NVY C;  3HOZ K;  3PO2 K;  4A93 K;  4Q5S A;  2VUM K;  2E2J C;  4AYB D;  4G7O A;  4Y7N C;  1I3Q K;  1XPP A;  2NVY K;  2WAQ D;  4A3G C;  1TWH C;  3GTL C;  4BXX C;  5M3F K;  4XLP A;  4A3G K;  4BXX K;  3GTM C;  4OIN A;  1R9T K;  4LLG A;  3H0G K;  3GTM K;  1I6H K;  4AYB L;  2NVQ C;  4Y52 K;  2NVT C;  4QJV B;  4JK1 A;  2WAQ L;  5FJ8 K;  2NVX C;  1Y1W K;  3GTG K;  3RZO K;  1Y1V C;  4LJZ A;  5IP7 K;  2YU9 K;  3I4M C;  1Y1V K;  3K7A C;  4YG2 A;  1TWC C;  4A3J C;  3K7A K;  1TWC K;  5IYD K;  5IYB C;  1WCM C;  1I6V A;  4LK0 A;  5TMF A;  5IYB K;  1WCM K;  3M4O K;  3CQZ K;  2E2I K;  4YFN A;  3GTP K;  2A6E A;  4OIQ A;  4NOI A;  2B63 K;  2JA7 K;  3S17 K;  3S1N K;  4X6A C;  1BDF A;  4C2M C;  4G7Z A;  2VUM C;  4C2M K;  1I3Q C;  1I50 C;  3GTQ C;  1I50 K;  1TWA C;  1ZYR A;  3GTQ K;  1R9T C;  1TWA K;  4A3L C;  3S1M K;  3H0G C;  3FKI C;  3S14 C;  4A3L K;  2A68 A;  4OIO A;  2PPB A;  3S2D C;  4KN4 A;  4Y52 C;  2WB1 D;  1I6H C;  3FKI K;  1TWF C;  3S14 K;  3S2D K;  2JA8 C;  1TWF K;  3RZD C;  5C44 C;  1Y1W C;  3GTG C;  3RZO C;  4GZY A;  5M3M K;  2YU9 C;  5C44 K;  3RZD K;  1K83 K;  2JA8 K;  3HOU C;  4Q4Z A;  2WB1 L;  2E2H K;  2BE5 A;  2PMZ D;  2PA8 D;  3HOU K;  3PO3 C;  5IYC C;  5IYD C;  3PO3 K;  2A6H A;  5IYC K;  2Y0S D;  1SFO K;  3M4O C;  5C4J K;  3S15 K;  3EQL A;  3CQZ C;  4QIW D;  3GTO K;  2PMZ L;  2E2I C;  3M3Y C;  3GTP C;  2PA8 L;  1TWG K;  2JA7 C;  2B63 C;  3I4N K;  4BBR C;  3M3Y K;  3S17 C;  3S1N C;  4A3C K;  4XSZ A;  4BBR K;  3HKZ D;  2Y0S L;  3HOX K;  4OIP A;  2R7Z C;  4QIW L;  3HOW C;  2R7Z K;  3HOW K;  3GTK C;  3S1M C;  3GTK K; 
#chains in the Genus database with same CATH topology
 1IL2 A;  2L3U A;  2P8T A;  4GTE A;  3S1Q K;  4WJ3 M;  5TMC A;  4O2D A;  5FLM K;  3GTQ A;  4BY1 C;  4BLA A;  1KQ4 A;  4YFK A;  2P5M A;  1XXC A;  4KMU A;  2EBB A;  2R93 K;  2ZJP S;  4C3I K;  5JVG S;  1J6X A;  1F93 A;  4A3K K;  4IOC S;  4G0V A;  1B4B A;  1TWH K;  2O5I A;  1PJ7 A;  4KAT A;  5C4X C;  3HOY K;  3HOV C;  4A3I C;  3TTG A;  3TFI A;  1J6W A;  1EI6 A;  3GTK A;  4A3E C;  4A3M C;  1JOE A;  3GTJ C;  2ZUE A;  2JA5 C;  4LQY A;  5CHP A;  3T02 A;  2JA6 K;  3S1R K;  4C45 A;  4X6A K;  4GTB A;  4A93 K;  4FM9 A;  4Y7N C;  4KB2 A;  4KMD A;  4A3G C;  3GTO A;  5M3F K;  4BXX K;  1TWG A;  4BKW A;  1INN A;  2GSU A;  2NVT C;  1PJ6 A;  1ISE A;  4U67 S;  1Y1V C;  4LJZ A;  3I4M C;  1FEU A;  2XCR B;  3K7A C;  3T00 A;  4YG2 A;  5HQH A;  3BUE A;  1XXA A;  1XZP A;  1WCM C;  5IYB K;  1O2B A;  4KDD A;  1UV7 A;  2A6E A;  5CJ9 A;  2R92 A;  2VUM C;  1XZP B;  3GEE A;  1I50 K;  1TWA C;  3OEP A;  3S1M K;  3H0G C;  3FKI C;  1YCL A;  4A3L K;  3S2D C;  1I6H C;  4Y52 C;  1DCH A;  3RZO C;  2JA8 K;  3GTL A;  5M3M K;  1X31 C;  4WFN S;  3CF5 S;  1K83 K;  3GTM A;  3HOU C;  4Q4Z A;  2E2H K;  2BE5 A;  3ADA C;  1WQG A;  5IYD C;  2NVX A;  2L5N A;  2Y0S D;  3S15 K;  3GTO K;  3AD7 C;  3GTP C;  1TWC A;  1TWG K;  3AH5 A;  4WCE S;  2JA7 C;  3I4N K;  3M3Y K;  3S17 C;  3SZY A;  4A3C K;  2Y0S L;  1EK8 A;  3TFH A;  4OIP A;  3HOW C;  3GTP A;  5FLM C;  1V5V A;  4AH6 A;  4A3F K;  5IP9 K;  1F7V A;  1TWF A;  4GTL A;  2V6T A;  3GTG A;  5C4J C;  4XLN A;  4A3D K;  2R93 C;  3N3Y A;  1J6V A;  3HOX C;  2KQ1 A;  2CW0 A;  3CQZ A;  3GTL K;  3AQO A;  2O5J A;  5IP7 C;  3HOY C;  4LK1 A;  4BBS C;  1G51 A;  4A3B C;  4GTF A;  3TFJ A;  2R7Z A;  5M5Y K;  4BY7 K;  2PHC B;  2NVX K;  1XXB A;  1USO A;  4A3J K;  3S2H K;  3ORE A;  3WOD A;  4G7H A;  2XCO A;  5C3E K;  2JA6 C;  4IO9 S;  1DCP A;  3DXJ A;  4MEY A;  3S1R C;  3LAJ A;  4C3H K;  4QJV A;  4A93 C;  3HOZ K;  3PO2 K;  2E2J C;  4AYB D;  2NVY K;  3GEH A;  1EFW A;  1XPP A;  4BXX C;  4XLP A;  4LLG A;  5E68 A;  4AYB L;  2NVQ C;  4QJV B;  4G0U A;  1O25 A;  3GTG K;  3AQP A;  1VH2 A;  5IYB C;  3S0X A;  3M4O K;  3CQZ K;  5IOR A;  2E2I K;  4YFN A;  3GTJ A;  2JA5 A;  3S1N K;  2KWA A;  3GIR A;  1I3Q C;  1I50 C;  1WQF A;  1O2A A;  1O26 A;  4PAA A;  1ZYR A;  3GTQ K;  1R9T C;  4A3L C;  2JA8 C;  2KXY A;  2JH3 A;  1Y1W C;  4GZY A;  1R9T A;  2YU9 C;  4LR2 A;  2ZFZ A;  3Q3Q A;  2PMZ D;  4WFA S;  1Y1W A;  3PO3 K;  1WSR A;  2YU9 A;  5IYC K;  1Y1V A;  3V4G A;  4QIW D;  2PMZ L;  3M3Y C;  2B63 C;  4BBR K;  3HKZ D;  1WCM A;  4QIW L;  4GT9 A;  3GTK K;  3HKZ L;  1HI9 A;  5C4X K;  2VUM A;  4KAW X;  5D4D A;  1TWA A;  3H0G A;  3FKI A;  3G4C A;  4G0W A;  4GTC A;  2JA5 K;  3PIO S;  4XSX A;  3H3V D;  4WIL A;  1YNN A;  1SFO C;  4A3D C;  3NUH A;  3DLL S;  1WOP A;  1ZVU A;  3H3V L;  5M5X K;  1SFO A;  2CFA A;  4Y7N K;  3SZZ A;  4ILD A;  5DM6 S;  2JA7 A;  5HL7 S;  1BJT A;  4BY7 C;  2NVT K;  3S1Q C;  1WSV A;  4C3J K;  2CFA B;  3OPF A;  3I4M K;  3S2H C;  4P9S A;  4KAR A;  1USM A;  5C3E C;  3S16 K;  3AD8 C;  4OIR A;  2R92 K;  1DCO A;  4YFX A;  1JVI A;  4C3H C;  1HQM A;  4C3I C;  3HOZ C;  3PO2 C;  5JVO A;  4KM8 A;  4A3K C;  2NVY C;  3N0B A;  4Q5S A;  1L0W A;  2VUM K;  4LOW A;  1YX2 A;  2WAQ D;  1TWH C;  2R93 A;  5JFE A;  4XCH A;  4OIN A;  3H0G K;  3GTM K;  1JQW A;  1I6H K;  4Y52 K;  4GTA A;  2WAQ L;  5FJ8 K;  3RZO K;  4KMH A;  4KMA A;  1WOS A;  2ZJR S;  2XCQ A;  1TWC K;  4GFQ A;  1AB4 A;  1GE9 A;  5IYD K;  4WJ4 A;  1BS2 A;  1I6V A;  1EH1 A;  3GTP K;  4OIQ A;  2JA7 K;  4NOI A;  4GTD A;  3S17 K;  4X6A C;  1BDF A;  1VLO A;  4C2M K;  2JA6 A;  1O27 A;  1O2F B;  3GTQ C;  2RGR A;  3A8J A;  2A68 A;  2PPB A;  1F9N A;  3L4J A;  3ERE D;  3S14 K;  2WB1 D;  1B4A A;  1TWF K;  3RZD K;  5C44 K;  3MML B;  2WB1 L;  4KB4 A;  3VA7 A;  3PO3 C;  4WF9 S;  5IYC C;  4PAB A;  2FQO A;  5C4J K;  3EQL A;  4BBR C;  3HOX K;  3LPX A;  2R7Z K;  2GAH C;  1F7U A;  3A8I A;  3GTK C;  3S1M C;  5IP7 K;  4BBS K;  5IOQ A;  1WOO A;  3BP8 C;  1WQH A;  4A3B K;  4ZH4 A;  4KM9 A;  1YNJ A;  1I3Q A;  1I50 A;  1SMY A;  2A69 A;  3IPJ A;  1K83 C;  1RU0 A;  3T01 A;  4BY1 K;  2E2H C;  2ZJQ S;  1ZBS A;  3GSI A;  2GAG C;  5L46 A;  1K83 A;  4DDQ A;  1IE0 A;  4P5A A;  3S15 C;  3GTO C;  2E2H A;  1IQ0 A;  5EGE A;  1TWG C;  4IOA S;  3I4N C;  5HL8 A;  4A3C C;  3FOE A;  5EGH A;  2E2J K;  4KN7 A;  1PJ5 A;  4KAS A;  4BLB A;  1ZQ1 C;  1IW7 A;  3AD9 C;  5M5W K;  2B63 A;  3JST A;  2D6F C;  2NVQ K;  4C3J C;  4M1X A;  3HOV K;  4A3I K;  4A3F C;  1DD5 A;  1ZXO A;  1EQR A;  3S16 C;  4P5B A;  4A3E K;  4A3M K;  5IP9 C;  2W7V A;  3GTJ K;  3BP3 A;  2R92 C;  4MQ9 A;  2V6S A;  3QX3 A;  4MEX A;  2ZUF A;  1XZQ A;  2RH6 A;  2FQT A;  4J3N A;  2Y3P A;  4G7O A;  1I3Q K;  3GTL C;  5IOS A;  4A3G K;  3GTM C;  1R9T K;  1XZQ B;  4JK1 A;  3GEI A;  2NVX C;  1Y1W K;  3L4K A;  2YU9 K;  1VJE A;  1Y1V K;  1TWC C;  4A3J C;  1O28 A;  3K7A K;  2KPU A;  1BGW A;  3CAG A;  4RMF A;  4LK0 A;  5TMF A;  3LAP A;  1WCM K;  3N0C A;  5TJ3 A;  2B63 K;  4C2M C;  4G7Z A;  2GSN A;  3FHZ A;  1C0A A;  1TWA K;  1IS1 A;  1J98 A;  3S14 C;  2GSO A;  4OIO A;  3FKI K;  2NVY A;  4KN4 A;  3FOF A;  1IBA A;  1TWF C;  3S2D K;  3PIP S;  4FZB A;  3RZD C;  5C44 C;  3GTG C;  1TWH A;  1O29 A;  3GDZ A;  2V6U A;  3A8K A;  2PA8 D;  3HOU K;  2A6H A;  5JVH S;  5IOT A;  1SFO K;  3M4O C;  3CQZ C;  5DM7 S;  4KC6 A;  2E2I C;  2PA8 L;  1WOR A;  4WFB S;  3S1N C;  4XSZ A;  1VGX A;  3G4A A;  2R7Z C;  3LYW A;  1VRQ C;  3HXA A;  2E2I A;  3HOW K;  1WIH A;  1O24 A; 
#chains in the Genus database with same CATH homology
 3HKZ L;  5C4X K;  4A3B K;  4ZH4 A;  3S1Q K;  5D4D A;  1YNJ A;  5FLM C;  5TMC A;  1SMY A;  5FLM K;  2A69 A;  4A3F K;  4BBS K;  4BY1 C;  1K83 C;  4BY1 K;  4YFK A;  2E2H C;  2JA5 K;  5IP9 K;  4XSX A;  3H3V D;  1YNN A;  1SFO C;  4A3D C;  5C4J C;  3S15 C;  4XLN A;  4KMU A;  3GTO C;  2R93 C;  4A3D K;  2R93 K;  1TWG C;  4C3I K;  3I4N C;  3H3V L;  5M5X K;  4A3C C;  4A3K K;  3HOX C;  2E2J K;  4KN7 A;  4Y7N K;  2CW0 A;  1TWH K;  1IW7 A;  2O5I A;  5M5W K;  3GTL K;  2O5J A;  5IP7 C;  3HOY C;  4LK1 A;  4BBS C;  5C4X C;  3HOY K;  3HOV C;  4A3I C;  4A3B C;  4C3J C;  4BY7 C;  2NVT K;  2NVQ K;  3HOV K;  3S1Q C;  4A3I K;  4C3J K;  5M5Y K;  2NVX K;  4BY7 K;  4A3F C;  3I4M K;  3S2H C;  4A3E C;  3S16 C;  4A3M C;  4A3J K;  3GTJ C;  3S2H K;  2JA5 C;  5C3E C;  4A3E K;  3WOD A;  4G7H A;  5IP9 C;  3GTJ K;  4A3M K;  5C3E K;  3S16 K;  2R92 C;  4MQ9 A;  4OIR A;  2R92 K;  2JA6 C;  4YFX A;  2JA6 K;  3DXJ A;  4MEY A;  1HQM A;  4C3H C;  3S1R C;  4C3I C;  4MEX A;  4C3H K;  3S1R K;  3HOZ C;  3PO2 C;  4QJV A;  4A93 C;  4A3K C;  4X6A K;  2NVY C;  3HOZ K;  3PO2 K;  4A93 K;  4Q5S A;  2VUM K;  2E2J C;  4AYB D;  4G7O A;  4Y7N C;  1I3Q K;  1XPP A;  2NVY K;  2WAQ D;  4A3G C;  1TWH C;  3GTL C;  4BXX C;  5M3F K;  4XLP A;  4A3G K;  4BXX K;  3GTM C;  4OIN A;  1R9T K;  4LLG A;  3H0G K;  3GTM K;  1I6H K;  4AYB L;  2NVQ C;  4Y52 K;  2NVT C;  4QJV B;  4JK1 A;  2WAQ L;  5FJ8 K;  2NVX C;  1Y1W K;  3GTG K;  3RZO K;  1Y1V C;  4LJZ A;  5IP7 K;  2YU9 K;  3I4M C;  1Y1V K;  3K7A C;  4YG2 A;  1TWC C;  4A3J C;  3K7A K;  1TWC K;  5IYD K;  5IYB C;  1WCM C;  1I6V A;  4LK0 A;  5TMF A;  5IYB K;  1WCM K;  3M4O K;  3CQZ K;  2E2I K;  4YFN A;  3GTP K;  2A6E A;  4OIQ A;  4NOI A;  2B63 K;  2JA7 K;  3S17 K;  3S1N K;  4X6A C;  1BDF A;  4C2M C;  4G7Z A;  2VUM C;  4C2M K;  1I3Q C;  1I50 C;  3GTQ C;  1I50 K;  1TWA C;  1ZYR A;  3GTQ K;  1R9T C;  1TWA K;  4A3L C;  3S1M K;  3H0G C;  3FKI C;  3S14 C;  4A3L K;  2A68 A;  4OIO A;  2PPB A;  3S2D C;  4KN4 A;  4Y52 C;  2WB1 D;  1I6H C;  3FKI K;  1TWF C;  3S14 K;  3S2D K;  2JA8 C;  1TWF K;  3RZD C;  5C44 C;  1Y1W C;  3GTG C;  3RZO C;  4GZY A;  5M3M K;  2YU9 C;  5C44 K;  3RZD K;  1K83 K;  2JA8 K;  3HOU C;  4Q4Z A;  2WB1 L;  2E2H K;  2BE5 A;  2PMZ D;  2PA8 D;  3HOU K;  3PO3 C;  5IYC C;  5IYD C;  3PO3 K;  2A6H A;  5IYC K;  2Y0S D;  1SFO K;  3M4O C;  5C4J K;  3S15 K;  3EQL A;  3CQZ C;  4QIW D;  3GTO K;  2PMZ L;  2E2I C;  3M3Y C;  3GTP C;  2PA8 L;  1TWG K;  2JA7 C;  2B63 C;  3I4N K;  4BBR C;  3M3Y K;  3S17 C;  3S1N C;  4A3C K;  4XSZ A;  4BBR K;  3HKZ D;  2Y0S L;  3HOX K;  4OIP A;  2R7Z C;  4QIW L;  3HOW C;  2R7Z K;  3HOW K;  3GTK C;  3S1M C;  3GTK K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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