5C3EC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 52
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c3eC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c3eC01
3S16K 1I50C 3M3YC 2NVTK 5FLMK 4OIQA 1I6HC 4A3EC 3PO3C 3GTPK 4LK0A 4BXXK 2PMZL 5TMFA 3HOZK 3S1RC 3S1NC 2VUMC 2E2HK 2PMZD 5IYBK 3S14K 1TWHK 2NVQC 2JA6K 3GTMK 5C44C 2O5JA 1I3QC 4MQ9A 2PA8D 3DXJA 4OIRA 4BY7C 3S1QK 4BY1C 1Y1WC 3I4NC 1TWAK 4A3IC 1ZYRA 3S1MC 5C3EC 2R7ZK 4C3IK 3GTQK 3S16C 3I4MK 4BBRK 3HOYK 4QJVA 2NVTC 5FLMC 5IP9K 4AYBD 3GTPC 4BXXC 3RZOK 4C3JK 3S17K 3HOZC 5M3FK 3GTLK 3PO2K 2JA7K 2E2HC 3S14C 5IYBC 1XPPA 2CW0A 4G7OA 1TWHC 3GTOK 5C4JC 4BBSK 2R92K 3S2HK 1HQMA 4YG2A 4A3GK 4A3DK 4YFNA 2BE5A 3HOXK 2PPBA 3H3VL 3S1QC 3GTJK 1TWGC 3S15K 1TWAC 3M4OC 3CQZC 4A3KK 4Y7NK 4Q4ZA 4A3CK 5IYDC 3RZDC 4Q5SA 2NVYK 2R7ZC 3HOWC 3HOUK 4A3JK 4C3IC 3GTQC 4C3HC 4A93K 1R9TK 1TWCK 1WCMC 4BBRC 3HOYC 3I4MC 1K83K 4A3FK 5IP9C 4MEXA 4XSZA 2E2JC 3HOVK 5C4XK 4JK1A 5M5XK 4X6AK 2JA8K 3RZOC 3K7AK 4C3JC 3S17C 3S2DK 4KN4A 3PO2C 4OINA 2JA7C 1BDFA 3HKZL 3GTOC 2NVXK 3FKIK 4G7HA 4GZYA 2A68A 4BBSC 1I50K 4NOIA 4XSXA 5IYCK 2R92C 3S2HC 4A3MK 2O5IA 2R93K 4A3LK 4A3DC 3HOXC 3PO3K 4LLGA 3GTJC 4G7ZA 2JA6C 3GTMC 4A3BK 5FJ8K 2WB1L 1YNJA 2VUMK 3S1NK 3WODA 4YFKA 4A3CC 3H0GK 4Y52K 2NVQK 3HOUC 2A6EA 4A93C 3H3VD 1I3QK 1Y1VK 5M5WK 1I6VA 1SFOK 2A6HA 1TWCC 4A3FC 1K83C 3HOVC 5M3MK 3GTKK 5C4XC 5TMCA 3I4NK 4X6AC 1TWFK 2E2IK 2YU9K 2B63K 3GTGK 3K7AC 4KN7A 3S2DC 4C2MK 5C3EK 2JA5K 4OIOA 5M5YK 5IP7K 1SMYA 4ZH4A 5IYCC 4KMUA 4A3MC 3GTLC 2R93C 4A3LC 4MEYA 3M3YK 3HKZD 4A3BC 2WAQL 1I6HK 2WAQD 4A3GC 4A3EK 3H0GC 2Y0SL 4Y52C 5C4JK 3EQLA 2A69A 1Y1VC 1SFOC 3S15C 2PA8L 2Y0SD 3S1RK 4A3KC 4Y7NC 2WB1D 1IW7A 4XLNA 4QJVB 2NVYC 3GTKC 1YNNA 1TWGK 4A3JC 5C44K 1TWFC 2E2IC 2YU9C 2B63C 1R9TC 3GTGC 4XLPA 3CQZK 3M4OK 4LK1A 4C2MC 2JA5C 3RZDK 5IYDK 4BY7K 4QIWL 3HOWK 4BY1K 5IP7C 1Y1WK 4C3HK 5D4DA 4A3IK 4QIWD 2JA8C 4AYBL 1WCMK 4LJZA 3S1MK 4OIPA 4YFXA 2E2JK 2NVXC 3FKIC
chains in the Genus database with same CATH superfamily
1I50C 5FLMK 3GDZA 1IQ0A 3GTPK 4KM8A 2PMZL 2E2HK 3S14K 1J98A 1TWHK 2NVQC 3GTMK 4WFBS 4P5AA 2O5JA 4MQ9A 5DM7S 3CQZA 4LQYA 4BY7C 3S1QK 4ILDA 5C3EC 2XCQA 1ZVUA 3I4MK 4LOWA 3LAPA 3A8KA 4BXXC 3N3YA 4WF9S 5M3FK 2ZFZA 3GTOK 5C4JC 1F93A 2R92K 4A3GK 4A3DK 4WJ4A 2BE5A 2KQ1A 3S15K 4A3KK 1XXBA 4Y7NK 1O25A 1XZQA 2R7ZC 3TFJA 2R7ZA 1TWCK 1HI9A 4KMDA 5IP9C 2E2JC 1ISEA 4X6AK 3RZOC 1VGXA 4C3JC 3S17C 1EFWA 4KN4A 1JOEA 2KWAA 3PO2C 2JA7C 1J6VA 1XXCA 4GFQA 3FKIK 4GZYA 2JA7A 5IYCK 4XSXA 2L3UA 3LYWA 3PIOS 3PO3K 1DCHA 2WB1L 2GSOA 1BJTA 1DCPA 4A3CC 4Y52K 2GSUA 3HOUC 3G4CA 3MMLB 1Y1VK 5M5WK 1SFOK 1I6VA 2A6HA 3SZYA 4A3FC 3I4NK 4KC6A 3K7AC 4KN7A 3FOFA 4KMHA 4FZBA 1SMYA 1VH2A 4KMUA 3VA7A 3GTLC 4A3LC 1RU0A 1WSVA 5CHPA 3M3YK 1USOA 4PABA 4KASA 1I6HK 2WAQD 5JVOA 3H0GC 4IOCS 3H0GA 1WIHA 1O2AA 3IPJA 1B4BA 1I3QA 2NVYC 3GTKC 2EBBA 5C44K 1TWFC 2E2IC 2YU9C 2B63C 3GTGC 3GTKA 4LK1A 4C2MC 2JA5C 1TWFA 3RZDK 2YU9A 3GTGA 2E2IA 2B63A 4BY1K 3AH5A 2JA5A 2CFAB 4QIWD 3S1MK 4OIPA 2NVXC 4GT9A 1O29A 3S16K 2V6SA 2NVTK 2JH3A 4OIQA 1EK8A 4A3EC 1V5VA 2ZJPS 4LK0A 2VUMC 3JSTA 1O2FB 2ZJRS 5EGEA 1EH1A 2JA6K 4IO9S 1TWGA 3GEIA 3OPFA 1Y1WC 4A3IC 1ZYRA 1Y1WA 1WCMA 4C3IK 4BBRK 3HOYK 5FLMC 3V4GA 4AYBD 3GTPC 2RH6A 1UV7A 4DDQA 3GTPA 2E2HC 3S14C 1XPPA 3AQOA 2CFAA 1TWHC 2E2HA 1XZQB 3PIPS 1TWHA 4YG2A 3CAGA 4YFNA 3HOXK 3S1QC 1YCLA 3M4OC 3CQZC 4KARA 4Q4ZA 5IYDC 4Q5SA 2V6TA 4A3JK 1R9TK 1AB4A 3I4MC 2ZUEA 1K83K 1WQFA 4XSZA 4GTEA 3HOVK 2JA8K 1BDFA 3GTOC 1I50K 4G0UA 2ZJQS 3GTOA 2R92C 4A3MK 4A3DC 2R92A 4KM9A 4BLAA 4G7ZA 3SZZA 3G4AA 1YNJA 4KATA 1O27A 1WQGA 2RGRA 2NVQK 2A6EA 1GE9A 1TWCC 1IE0A 4GTCA 1TWCA 5M3MK 1PJ5A 5TMCA 1JQWA 4X6AC 4C45A 1O26A 4PAAA 5C3EK 4OIOA 5M5YK 2FQOA 4G0VA 4ZH4A 5IYCC 3FKIA 4WFAS 3AD9C 2GAGC 4WILA 1B4AA 1PJ7A 3HKZD 5EGHA 3A8IA 3TFIA 3BP3A 5IORA 1WOPA 4Y52C 2GAHC 2Y0SL 5C4JK 3N0BA 1Y1VC 1SFOC 4RMFA 5JVHS 3S1RK 1Y1VA 1SFOA 3T02A 2XCOA 1VLOA 3FHZA 5D4DA 4AYBL 4LJZA 3OEPA 3BUEA 2E2JK 1VRQC 3M3YC 2P5MA 4O2DA 1I6HC 2D6FC 4GTDA 3L4JA 1XZPB 5TMFA 3HOZK 3S1NC 2PMZD 5IYBK 5C44C 1I3QC 3AD7C 2W7VA 2PA8D 4OIRA 4BY1C 1TWAK 1KQ4A 1ZXOA 3S1MC 4AH6A 3CF5S 3TTGA 4J3NA 4FM9A 3GTQK 1O24A 3S16C 2NVTC 3GTLK 1EQRA 4G7OA 4BBSK 4G0WA 3S2HK 1HQMA 1WSRA 2JA6A 1F7UA 3GTJK 1TWGC 4BKWA 5L46A 1DD5A 3QX3A 1C0AA 4KDDA 2V6UA 2NVYK 3HOWC 1XZPA 4GTFA 4C3IC 4A93K 4C3HC 2L5NA 1WCMC 4BBRC 3HOYC 1J6XA 4MEXA 2ZUFA 2KXYA 1XXAA 5C4XK 2PHCB 2XCRB 3LPXA 3ERED 3S2DK 3HKZL 2NVXK 5CJ9A 1WORA 4KB4A 2A68A 3GSIA 2O5IA 2R93K 3HOXC 3Q3QA 3GTMC 4A3BK 2VUMK 3GTMA 3WODA 3H3VD 1K83C 1R9TA 4GTBA 3HOVC 1K83A 3T01A 5IP7K 1G51A 1BGWA 3GEEA 4A3MC 1I50A 2WAQL 3BP8C 4A3GC 4GTLA 3AD8C 5IOTA 3EQLA 2A69A 3S15C 2PA8L 4U67S 4A3KC 4Y7NC 4QJVB 4XLNA 1VJEA 3M4OK 3CQZK 4XLPA 5IYDK 3GEHA 4BY7K 4QIWL 4P9SA 3FKIC 4M1XA 4KMAA 1L0WA 3PO3C 4BXXK 1JVIA 3S1RC 3T00A 5DM6S 3DXJA 4LR2A 3L4KA 3I4NC 1X31C 1IBAA 1DCOA 2R7ZK 3S0XA 4BLBA 3N0CA 3LAJA 4QJVA 2KPUA 4P5BA 5IP9K 1J6WA 1O28A 4GTAA 3RZOK 4WJ3M 4C3JK 3S17K 3HOZC 1F9NA 4WCES 3PO2K 2JA7K 4KAWX 5IYBC 2Y3PA 2CW0A 5TJ3A 3GIRA 3TFHA 5HL7S 4XCHA 2PPBA 3H3VL 1YX2A 5IOSA 4KB2A 1TWAC 1TWAA 4A3CK 3RZDC 3HOUK 3GTQC 3GTQA 4A3FK 4JK1A 3ADAC 5HQHA 5M5XK 3AQPA 5HL8A 3K7AK 5E68A 4OINA 4G7HA 3GTLA 4BBSC 4NOIA 3S2HC 3FOEA 4A3LK 4WFNS 4LLGA 3GTJC 2JA6C 1WOSA 5FJ8K 3S1NK 3GTJA 4YFKA 3H0GK 4A93C 1EI6A 1I3QK 2NVYA 1F7VA 1PJ6A 3DLLS 1WQHA 3GTKK 5C4XC 1TWFK 2E2IK 2YU9K 2B63K 3GTGK 3S2DC 3A8JA 4C2MK 2JA5K 3OREA 1O2BA 2GSNA 5JVGS 2NVXA 1IL2A 2R93C 4MEYA 2R93A 1INNA 2FQTA 4A3BC 1ZQ1C 1WOOA 1USMA 4A3EK 2VUMA 4IOAS 2Y0SD 2WB1D 1IW7A 1TWGK 1YNNA 4A3JC 1IS1A 1R9TC 1BS2A 3HXAA 1ZBSA 1FEUA 3NUHA 3HOWK 5IP7C 2P8TA 4C3HK 5IOQA 4A3IK 1Y1WK 2JA8C 1WCMK 4YFXA 5JFEA
chains in the Genus database with same CATH topology
3S16K 1I50C 3M3YC 2NVTK 5FLMK 4OIQA 1I6HC 4A3EC 3PO3C 3GTPK 4LK0A 4BXXK 2PMZL 5TMFA 3HOZK 3S1RC 3S1NC 2VUMC 2E2HK 2PMZD 5IYBK 3S14K 1TWHK 2NVQC 2JA6K 3GTMK 5C44C 2O5JA 1I3QC 4MQ9A 2PA8D 3DXJA 4OIRA 4BY7C 3S1QK 4BY1C 1Y1WC 3I4NC 1TWAK 4A3IC 1ZYRA 3S1MC 5C3EC 2R7ZK 4C3IK 3GTQK 3S16C 3I4MK 4BBRK 3HOYK 4QJVA 2NVTC 5FLMC 5IP9K 4AYBD 3GTPC 4BXXC 3RZOK 4C3JK 3S17K 3HOZC 5M3FK 3GTLK 3PO2K 2JA7K 2E2HC 3S14C 5IYBC 1XPPA 2CW0A 4G7OA 1TWHC 3GTOK 5C4JC 4BBSK 2R92K 3S2HK 1HQMA 4YG2A 4A3GK 4A3DK 4YFNA 2BE5A 3HOXK 2PPBA 3H3VL 3S1QC 3GTJK 1TWGC 3S15K 1TWAC 3M4OC 3CQZC 4A3KK 4Y7NK 4Q4ZA 4A3CK 5IYDC 3RZDC 4Q5SA 2NVYK 2R7ZC 3HOWC 3HOUK 4A3JK 4C3IC 3GTQC 4C3HC 4A93K 1R9TK 1TWCK 1WCMC 4BBRC 3HOYC 3I4MC 1K83K 4A3FK 5IP9C 4MEXA 4XSZA 2E2JC 3HOVK 5C4XK 4JK1A 5M5XK 4X6AK 2JA8K 3RZOC 3K7AK 4C3JC 3S17C 3S2DK 4KN4A 3PO2C 4OINA 2JA7C 1BDFA 3HKZL 3GTOC 2NVXK 3FKIK 4G7HA 4GZYA 2A68A 4BBSC 1I50K 4NOIA 4XSXA 5IYCK 2R92C 3S2HC 4A3MK 2O5IA 2R93K 4A3LK 4A3DC 3HOXC 3PO3K 4LLGA 3GTJC 4G7ZA 2JA6C 3GTMC 4A3BK 5FJ8K 2WB1L 1YNJA 2VUMK 3S1NK 3WODA 4YFKA 4A3CC 3H0GK 4Y52K 2NVQK 3HOUC 2A6EA 4A93C 3H3VD 1I3QK 1Y1VK 5M5WK 1I6VA 1SFOK 2A6HA 1TWCC 4A3FC 1K83C 3HOVC 5M3MK 3GTKK 5C4XC 5TMCA 3I4NK 4X6AC 1TWFK 2E2IK 2YU9K 2B63K 3GTGK 3K7AC 4KN7A 3S2DC 4C2MK 5C3EK 2JA5K 4OIOA 5M5YK 5IP7K 1SMYA 4ZH4A 5IYCC 4KMUA 4A3MC 3GTLC 2R93C 4A3LC 4MEYA 3M3YK 3HKZD 4A3BC 2WAQL 1I6HK 2WAQD 4A3GC 4A3EK 3H0GC 2Y0SL 4Y52C 5C4JK 3EQLA 2A69A 1Y1VC 1SFOC 3S15C 2PA8L 2Y0SD 3S1RK 4A3KC 4Y7NC 2WB1D 1IW7A 4XLNA 4QJVB 2NVYC 3GTKC 1YNNA 1TWGK 4A3JC 5C44K 1TWFC 2E2IC 2YU9C 2B63C 1R9TC 3GTGC 4XLPA 3CQZK 3M4OK 4LK1A 4C2MC 2JA5C 3RZDK 5IYDK 4BY7K 4QIWL 3HOWK 4BY1K 5IP7C 1Y1WK 4C3HK 5D4DA 4A3IK 4QIWD 2JA8C 4AYBL 1WCMK 4LJZA 3S1MK 4OIPA 4YFXA 2E2JK 2NVXC 3FKIC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S16 K;  1I50 C;  3M3Y C;  2NVT K;  5FLM K;  4OIQ A;  1I6H C;  4A3E C;  3PO3 C;  3GTP K;  4LK0 A;  4BXX K;  2PMZ L;  5TMF A;  3HOZ K;  3S1R C;  3S1N C;  2VUM C;  2E2H K;  2PMZ D;  5IYB K;  3S14 K;  1TWH K;  2NVQ C;  2JA6 K;  3GTM K;  5C44 C;  2O5J A;  1I3Q C;  4MQ9 A;  2PA8 D;  3DXJ A;  4OIR A;  4BY7 C;  3S1Q K;  4BY1 C;  1Y1W C;  3I4N C;  1TWA K;  4A3I C;  1ZYR A;  3S1M C;  5C3E C;  2R7Z K;  4C3I K;  3GTQ K;  3S16 C;  3I4M K;  4BBR K;  3HOY K;  4QJV A;  2NVT C;  5FLM C;  5IP9 K;  4AYB D;  3GTP C;  4BXX C;  3RZO K;  4C3J K;  3S17 K;  3HOZ C;  5M3F K;  3GTL K;  3PO2 K;  2JA7 K;  2E2H C;  3S14 C;  5IYB C;  1XPP A;  2CW0 A;  4G7O A;  1TWH C;  3GTO K;  5C4J C;  4BBS K;  2R92 K;  3S2H K;  1HQM A;  4YG2 A;  4A3G K;  4A3D K;  4YFN A;  2BE5 A;  3HOX K;  2PPB A;  3H3V L;  3S1Q C;  3GTJ K;  1TWG C;  3S15 K;  1TWA C;  3M4O C;  3CQZ C;  4A3K K;  4Y7N K;  4Q4Z A;  4A3C K;  5IYD C;  3RZD C;  4Q5S A;  2NVY K;  2R7Z C;  3HOW C;  3HOU K;  4A3J K;  4C3I C;  3GTQ C;  4C3H C;  4A93 K;  1R9T K;  1TWC K;  1WCM C;  4BBR C;  3HOY C;  3I4M C;  1K83 K;  4A3F K;  5IP9 C;  4MEX A;  4XSZ A;  2E2J C;  3HOV K;  5C4X K;  4JK1 A;  5M5X K;  4X6A K;  2JA8 K;  3RZO C;  3K7A K;  4C3J C;  3S17 C;  3S2D K;  4KN4 A;  3PO2 C;  4OIN A;  2JA7 C;  1BDF A;  3HKZ L;  3GTO C;  2NVX K;  3FKI K;  4G7H A;  4GZY A;  2A68 A;  4BBS C;  1I50 K;  4NOI A;  4XSX A;  5IYC K;  2R92 C;  3S2H C;  4A3M K;  2O5I A;  2R93 K;  4A3L K;  4A3D C;  3HOX C;  3PO3 K;  4LLG A;  3GTJ C;  4G7Z A;  2JA6 C;  3GTM C;  4A3B K;  5FJ8 K;  2WB1 L;  1YNJ A;  2VUM K;  3S1N K;  3WOD A;  4YFK A;  4A3C C;  3H0G K;  4Y52 K;  2NVQ K;  3HOU C;  2A6E A;  4A93 C;  3H3V D;  1I3Q K;  1Y1V K;  5M5W K;  1I6V A;  1SFO K;  2A6H A;  1TWC C;  4A3F C;  1K83 C;  3HOV C;  5M3M K;  3GTK K;  5C4X C;  5TMC A;  3I4N K;  4X6A C;  1TWF K;  2E2I K;  2YU9 K;  2B63 K;  3GTG K;  3K7A C;  4KN7 A;  3S2D C;  4C2M K;  5C3E K;  2JA5 K;  4OIO A;  5M5Y K;  5IP7 K;  1SMY A;  4ZH4 A;  5IYC C;  4KMU A;  4A3M C;  3GTL C;  2R93 C;  4A3L C;  4MEY A;  3M3Y K;  3HKZ D;  4A3B C;  2WAQ L;  1I6H K;  2WAQ D;  4A3G C;  4A3E K;  3H0G C;  2Y0S L;  4Y52 C;  5C4J K;  3EQL A;  2A69 A;  1Y1V C;  1SFO C;  3S15 C;  2PA8 L;  2Y0S D;  3S1R K;  4A3K C;  4Y7N C;  2WB1 D;  1IW7 A;  4XLN A;  4QJV B;  2NVY C;  3GTK C;  1YNN A;  1TWG K;  4A3J C;  5C44 K;  1TWF C;  2E2I C;  2YU9 C;  2B63 C;  1R9T C;  3GTG C;  4XLP A;  3CQZ K;  3M4O K;  4LK1 A;  4C2M C;  2JA5 C;  3RZD K;  5IYD K;  4BY7 K;  4QIW L;  3HOW K;  4BY1 K;  5IP7 C;  1Y1W K;  4C3H K;  5D4D A;  4A3I K;  4QIW D;  2JA8 C;  4AYB L;  1WCM K;  4LJZ A;  3S1M K;  4OIP A;  4YFX A;  2E2J K;  2NVX C;  3FKI C; 
#chains in the Genus database with same CATH topology
 1I50 C;  5FLM K;  3GDZ A;  1IQ0 A;  3GTP K;  4KM8 A;  2PMZ L;  2E2H K;  3S14 K;  1J98 A;  1TWH K;  2NVQ C;  3GTM K;  4WFB S;  4P5A A;  2O5J A;  4MQ9 A;  5DM7 S;  3CQZ A;  4LQY A;  4BY7 C;  3S1Q K;  4ILD A;  5C3E C;  2XCQ A;  1ZVU A;  3I4M K;  4LOW A;  3LAP A;  3A8K A;  4BXX C;  3N3Y A;  4WF9 S;  5M3F K;  2ZFZ A;  3GTO K;  5C4J C;  1F93 A;  2R92 K;  4A3G K;  4A3D K;  4WJ4 A;  2BE5 A;  2KQ1 A;  3S15 K;  4A3K K;  1XXB A;  4Y7N K;  1O25 A;  1XZQ A;  2R7Z C;  3TFJ A;  2R7Z A;  1TWC K;  1HI9 A;  4KMD A;  5IP9 C;  2E2J C;  1ISE A;  4X6A K;  3RZO C;  1VGX A;  4C3J C;  3S17 C;  1EFW A;  4KN4 A;  1JOE A;  2KWA A;  3PO2 C;  2JA7 C;  1J6V A;  1XXC A;  4GFQ A;  3FKI K;  4GZY A;  2JA7 A;  5IYC K;  4XSX A;  2L3U A;  3LYW A;  3PIO S;  3PO3 K;  1DCH A;  2WB1 L;  2GSO A;  1BJT A;  1DCP A;  4A3C C;  4Y52 K;  2GSU A;  3HOU C;  3G4C A;  3MML B;  1Y1V K;  5M5W K;  1SFO K;  1I6V A;  2A6H A;  3SZY A;  4A3F C;  3I4N K;  4KC6 A;  3K7A C;  4KN7 A;  3FOF A;  4KMH A;  4FZB A;  1SMY A;  1VH2 A;  4KMU A;  3VA7 A;  3GTL C;  4A3L C;  1RU0 A;  1WSV A;  5CHP A;  3M3Y K;  1USO A;  4PAB A;  4KAS A;  1I6H K;  2WAQ D;  5JVO A;  3H0G C;  4IOC S;  3H0G A;  1WIH A;  1O2A A;  3IPJ A;  1B4B A;  1I3Q A;  2NVY C;  3GTK C;  2EBB A;  5C44 K;  1TWF C;  2E2I C;  2YU9 C;  2B63 C;  3GTG C;  3GTK A;  4LK1 A;  4C2M C;  2JA5 C;  1TWF A;  3RZD K;  2YU9 A;  3GTG A;  2E2I A;  2B63 A;  4BY1 K;  3AH5 A;  2JA5 A;  2CFA B;  4QIW D;  3S1M K;  4OIP A;  2NVX C;  4GT9 A;  1O29 A;  3S16 K;  2V6S A;  2NVT K;  2JH3 A;  4OIQ A;  1EK8 A;  4A3E C;  1V5V A;  2ZJP S;  4LK0 A;  2VUM C;  3JST A;  1O2F B;  2ZJR S;  5EGE A;  1EH1 A;  2JA6 K;  4IO9 S;  1TWG A;  3GEI A;  3OPF A;  1Y1W C;  4A3I C;  1ZYR A;  1Y1W A;  1WCM A;  4C3I K;  4BBR K;  3HOY K;  5FLM C;  3V4G A;  4AYB D;  3GTP C;  2RH6 A;  1UV7 A;  4DDQ A;  3GTP A;  2E2H C;  3S14 C;  1XPP A;  3AQO A;  2CFA A;  1TWH C;  2E2H A;  1XZQ B;  3PIP S;  1TWH A;  4YG2 A;  3CAG A;  4YFN A;  3HOX K;  3S1Q C;  1YCL A;  3M4O C;  3CQZ C;  4KAR A;  4Q4Z A;  5IYD C;  4Q5S A;  2V6T A;  4A3J K;  1R9T K;  1AB4 A;  3I4M C;  2ZUE A;  1K83 K;  1WQF A;  4XSZ A;  4GTE A;  3HOV K;  2JA8 K;  1BDF A;  3GTO C;  1I50 K;  4G0U A;  2ZJQ S;  3GTO A;  2R92 C;  4A3M K;  4A3D C;  2R92 A;  4KM9 A;  4BLA A;  4G7Z A;  3SZZ A;  3G4A A;  1YNJ A;  4KAT A;  1O27 A;  1WQG A;  2RGR A;  2NVQ K;  2A6E A;  1GE9 A;  1TWC C;  1IE0 A;  4GTC A;  1TWC A;  5M3M K;  1PJ5 A;  5TMC A;  1JQW A;  4X6A C;  4C45 A;  1O26 A;  4PAA A;  5C3E K;  4OIO A;  5M5Y K;  2FQO A;  4G0V A;  4ZH4 A;  5IYC C;  3FKI A;  4WFA S;  3AD9 C;  2GAG C;  4WIL A;  1B4A A;  1PJ7 A;  3HKZ D;  5EGH A;  3A8I A;  3TFI A;  3BP3 A;  5IOR A;  1WOP A;  4Y52 C;  2GAH C;  2Y0S L;  5C4J K;  3N0B A;  1Y1V C;  1SFO C;  4RMF A;  5JVH S;  3S1R K;  1Y1V A;  1SFO A;  3T02 A;  2XCO A;  1VLO A;  3FHZ A;  5D4D A;  4AYB L;  4LJZ A;  3OEP A;  3BUE A;  2E2J K;  1VRQ C;  3M3Y C;  2P5M A;  4O2D A;  1I6H C;  2D6F C;  4GTD A;  3L4J A;  1XZP B;  5TMF A;  3HOZ K;  3S1N C;  2PMZ D;  5IYB K;  5C44 C;  1I3Q C;  3AD7 C;  2W7V A;  2PA8 D;  4OIR A;  4BY1 C;  1TWA K;  1KQ4 A;  1ZXO A;  3S1M C;  4AH6 A;  3CF5 S;  3TTG A;  4J3N A;  4FM9 A;  3GTQ K;  1O24 A;  3S16 C;  2NVT C;  3GTL K;  1EQR A;  4G7O A;  4BBS K;  4G0W A;  3S2H K;  1HQM A;  1WSR A;  2JA6 A;  1F7U A;  3GTJ K;  1TWG C;  4BKW A;  5L46 A;  1DD5 A;  3QX3 A;  1C0A A;  4KDD A;  2V6U A;  2NVY K;  3HOW C;  1XZP A;  4GTF A;  4C3I C;  4A93 K;  4C3H C;  2L5N A;  1WCM C;  4BBR C;  3HOY C;  1J6X A;  4MEX A;  2ZUF A;  2KXY A;  1XXA A;  5C4X K;  2PHC B;  2XCR B;  3LPX A;  3ERE D;  3S2D K;  3HKZ L;  2NVX K;  5CJ9 A;  1WOR A;  4KB4 A;  2A68 A;  3GSI A;  2O5I A;  2R93 K;  3HOX C;  3Q3Q A;  3GTM C;  4A3B K;  2VUM K;  3GTM A;  3WOD A;  3H3V D;  1K83 C;  1R9T A;  4GTB A;  3HOV C;  1K83 A;  3T01 A;  5IP7 K;  1G51 A;  1BGW A;  3GEE A;  4A3M C;  1I50 A;  2WAQ L;  3BP8 C;  4A3G C;  4GTL A;  3AD8 C;  5IOT A;  3EQL A;  2A69 A;  3S15 C;  2PA8 L;  4U67 S;  4A3K C;  4Y7N C;  4QJV B;  4XLN A;  1VJE A;  3M4O K;  3CQZ K;  4XLP A;  5IYD K;  3GEH A;  4BY7 K;  4QIW L;  4P9S A;  3FKI C;  4M1X A;  4KMA A;  1L0W A;  3PO3 C;  4BXX K;  1JVI A;  3S1R C;  3T00 A;  5DM6 S;  3DXJ A;  4LR2 A;  3L4K A;  3I4N C;  1X31 C;  1IBA A;  1DCO A;  2R7Z K;  3S0X A;  4BLB A;  3N0C A;  3LAJ A;  4QJV A;  2KPU A;  4P5B A;  5IP9 K;  1J6W A;  1O28 A;  4GTA A;  3RZO K;  4WJ3 M;  4C3J K;  3S17 K;  3HOZ C;  1F9N A;  4WCE S;  3PO2 K;  2JA7 K;  4KAW X;  5IYB C;  2Y3P A;  2CW0 A;  5TJ3 A;  3GIR A;  3TFH A;  5HL7 S;  4XCH A;  2PPB A;  3H3V L;  1YX2 A;  5IOS A;  4KB2 A;  1TWA C;  1TWA A;  4A3C K;  3RZD C;  3HOU K;  3GTQ C;  3GTQ A;  4A3F K;  4JK1 A;  3ADA C;  5HQH A;  5M5X K;  3AQP A;  5HL8 A;  3K7A K;  5E68 A;  4OIN A;  4G7H A;  3GTL A;  4BBS C;  4NOI A;  3S2H C;  3FOE A;  4A3L K;  4WFN S;  4LLG A;  3GTJ C;  2JA6 C;  1WOS A;  5FJ8 K;  3S1N K;  3GTJ A;  4YFK A;  3H0G K;  4A93 C;  1EI6 A;  1I3Q K;  2NVY A;  1F7V A;  1PJ6 A;  3DLL S;  1WQH A;  3GTK K;  5C4X C;  1TWF K;  2E2I K;  2YU9 K;  2B63 K;  3GTG K;  3S2D C;  3A8J A;  4C2M K;  2JA5 K;  3ORE A;  1O2B A;  2GSN A;  5JVG S;  2NVX A;  1IL2 A;  2R93 C;  4MEY A;  2R93 A;  1INN A;  2FQT A;  4A3B C;  1ZQ1 C;  1WOO A;  1USM A;  4A3E K;  2VUM A;  4IOA S;  2Y0S D;  2WB1 D;  1IW7 A;  1TWG K;  1YNN A;  4A3J C;  1IS1 A;  1R9T C;  1BS2 A;  3HXA A;  1ZBS A;  1FEU A;  3NUH A;  3HOW K;  5IP7 C;  2P8T A;  4C3H K;  5IOQ A;  4A3I K;  1Y1W K;  2JA8 C;  1WCM K;  4YFX A;  5JFE A; 
#chains in the Genus database with same CATH homology
 3S16 K;  1I50 C;  3M3Y C;  2NVT K;  5FLM K;  4OIQ A;  1I6H C;  4A3E C;  3PO3 C;  3GTP K;  4LK0 A;  4BXX K;  2PMZ L;  5TMF A;  3HOZ K;  3S1R C;  3S1N C;  2VUM C;  2E2H K;  2PMZ D;  5IYB K;  3S14 K;  1TWH K;  2NVQ C;  2JA6 K;  3GTM K;  5C44 C;  2O5J A;  1I3Q C;  4MQ9 A;  2PA8 D;  3DXJ A;  4OIR A;  4BY7 C;  3S1Q K;  4BY1 C;  1Y1W C;  3I4N C;  1TWA K;  4A3I C;  1ZYR A;  3S1M C;  5C3E C;  2R7Z K;  4C3I K;  3GTQ K;  3S16 C;  3I4M K;  4BBR K;  3HOY K;  4QJV A;  2NVT C;  5FLM C;  5IP9 K;  4AYB D;  3GTP C;  4BXX C;  3RZO K;  4C3J K;  3S17 K;  3HOZ C;  5M3F K;  3GTL K;  3PO2 K;  2JA7 K;  2E2H C;  3S14 C;  5IYB C;  1XPP A;  2CW0 A;  4G7O A;  1TWH C;  3GTO K;  5C4J C;  4BBS K;  2R92 K;  3S2H K;  1HQM A;  4YG2 A;  4A3G K;  4A3D K;  4YFN A;  2BE5 A;  3HOX K;  2PPB A;  3H3V L;  3S1Q C;  3GTJ K;  1TWG C;  3S15 K;  1TWA C;  3M4O C;  3CQZ C;  4A3K K;  4Y7N K;  4Q4Z A;  4A3C K;  5IYD C;  3RZD C;  4Q5S A;  2NVY K;  2R7Z C;  3HOW C;  3HOU K;  4A3J K;  4C3I C;  3GTQ C;  4C3H C;  4A93 K;  1R9T K;  1TWC K;  1WCM C;  4BBR C;  3HOY C;  3I4M C;  1K83 K;  4A3F K;  5IP9 C;  4MEX A;  4XSZ A;  2E2J C;  3HOV K;  5C4X K;  4JK1 A;  5M5X K;  4X6A K;  2JA8 K;  3RZO C;  3K7A K;  4C3J C;  3S17 C;  3S2D K;  4KN4 A;  3PO2 C;  4OIN A;  2JA7 C;  1BDF A;  3HKZ L;  3GTO C;  2NVX K;  3FKI K;  4G7H A;  4GZY A;  2A68 A;  4BBS C;  1I50 K;  4NOI A;  4XSX A;  5IYC K;  2R92 C;  3S2H C;  4A3M K;  2O5I A;  2R93 K;  4A3L K;  4A3D C;  3HOX C;  3PO3 K;  4LLG A;  3GTJ C;  4G7Z A;  2JA6 C;  3GTM C;  4A3B K;  5FJ8 K;  2WB1 L;  1YNJ A;  2VUM K;  3S1N K;  3WOD A;  4YFK A;  4A3C C;  3H0G K;  4Y52 K;  2NVQ K;  3HOU C;  2A6E A;  4A93 C;  3H3V D;  1I3Q K;  1Y1V K;  5M5W K;  1I6V A;  1SFO K;  2A6H A;  1TWC C;  4A3F C;  1K83 C;  3HOV C;  5M3M K;  3GTK K;  5C4X C;  5TMC A;  3I4N K;  4X6A C;  1TWF K;  2E2I K;  2YU9 K;  2B63 K;  3GTG K;  3K7A C;  4KN7 A;  3S2D C;  4C2M K;  5C3E K;  2JA5 K;  4OIO A;  5M5Y K;  5IP7 K;  1SMY A;  4ZH4 A;  5IYC C;  4KMU A;  4A3M C;  3GTL C;  2R93 C;  4A3L C;  4MEY A;  3M3Y K;  3HKZ D;  4A3B C;  2WAQ L;  1I6H K;  2WAQ D;  4A3G C;  4A3E K;  3H0G C;  2Y0S L;  4Y52 C;  5C4J K;  3EQL A;  2A69 A;  1Y1V C;  1SFO C;  3S15 C;  2PA8 L;  2Y0S D;  3S1R K;  4A3K C;  4Y7N C;  2WB1 D;  1IW7 A;  4XLN A;  4QJV B;  2NVY C;  3GTK C;  1YNN A;  1TWG K;  4A3J C;  5C44 K;  1TWF C;  2E2I C;  2YU9 C;  2B63 C;  1R9T C;  3GTG C;  4XLP A;  3CQZ K;  3M4O K;  4LK1 A;  4C2M C;  2JA5 C;  3RZD K;  5IYD K;  4BY7 K;  4QIW L;  3HOW K;  4BY1 K;  5IP7 C;  1Y1W K;  4C3H K;  5D4D A;  4A3I K;  4QIW D;  2JA8 C;  4AYB L;  1WCM K;  4LJZ A;  3S1M K;  4OIP A;  4YFX A;  2E2J K;  2NVX C;  3FKI C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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