5CSCA

Structure of an open form of chicken heart citrate synthase at 2.8 angstroms resolution
Total Genus 125
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
125
sequence length
433
structure length
429
Chain Sequence
ASSTNLKDVLAALIPKEQARIKTFRQQHGGTALGQITVDMSYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKGGGGEPLPEGLFWLLVTGQIPTGAQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGILRTKYWEMVYESAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLGWLAQLQKAAGADASLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPGDPMFKLVAQLYKIVPNVLLEQGAAANPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTDGLIAL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxo-acid-lyase
molecule keywords CITRATE SYNTHASE
publication title Crystal structure of an open conformation of citrate synthase from chicken heart at 2.8-A resolution
pubmed doi rcsb
source organism Gallus gallus
total genus 125
structure length 429
sequence length 433
ec nomenclature ec 2.3.3.1: Citrate (Si)-synthase.
pdb deposition date 1990-05-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00285 Citrate_synt Citrate synthase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.230.10 Mainly Alpha Orthogonal Bundle Cytochrome p450-Terp; domain 2 Cytochrome P450-Terp, domain 2 5cscA02
1.10.580.10 Mainly Alpha Orthogonal Bundle Citrate Synthase; domain 1 Citrate Synthase, domain 1 5cscA01
1A59A 1NXEA 4CTSA 1CSIA 2CTSA 3TQGA 2CSCA 4JAGA 1CSCA 1AJ8A 4CSCA 4E6YA 2R26A 1AMZA 4G6BA 1O7XA 1IXEA 1OWBA 4JAEA 5CSCA 1OWCA 2IBPA 1VGPA 6CTSA 3ENJA 2P2WA 1VGMA 3MSUA 1AL6A 1CSSA 1CSHA 2R9EA 5CTSA 3CSCA 1CTSA 6CSCA 4JADA 3O8JA 5CSCB 1CSRA 2IFCA 1NXGA 2H12A 1IOMA 4YBOA 4JAFA 3HWKA 4TVMA 4XGHA 2C6XA
chains in the Genus database with same CATH superfamily
1A59A 1NXEA 4CTSA 1CSIA 2CTSA 3TQGA 2CSCA 4JAGA 1CSCA 1AJ8A 4CSCA 4E6YA 2R26A 1AMZA 4G6BA 1O7XA 1IXEA 1OWBA 4JAEA 5CSCA 1OWCA 2IBPA 1VGPA 6CTSA 3ENJA 2P2WA 1VGMA 3MSUA 1AL6A 1CSSA 1CSHA 2R9EA 5CTSA 3CSCA 1CTSA 6CSCA 4JADA 3O8JA 5CSCB 1CSRA 2IFCA 1NXGA 2H12A 1IOMA 4YBOA 4JAFA 3HWKA 4TVMA 4XGHA 2C6XA
chains in the Genus database with same CATH topology
1A59A 1NXEA 4CTSA 1CSIA 2CTSA 3TQGA 2CSCA 4JAGA 1CSCA 1AJ8A 4CSCA 4E6YA 2R26A 1AMZA 4G6BA 1O7XA 1IXEA 1OWBA 4JAEA 5CSCA 1OWCA 2IBPA 1VGPA 6CTSA 3ENJA 2P2WA 1VGMA 3MSUA 1AL6A 1CSSA 1CSHA 2R9EA 5CTSA 3CSCA 1CTSA 6CSCA 4JADA 3O8JA 5CSCB 1CSRA 2IFCA 1NXGA 2H12A 1IOMA 4YBOA 4JAFA 3HWKA 4TVMA 4XGHA 2C6XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1A59 A;  1NXE A;  4CTS A;  1CSI A;  2CTS A;  3TQG A;  2CSC A;  4JAG A;  1CSC A;  1AJ8 A;  4CSC A;  4E6Y A;  2R26 A;  1AMZ A;  4G6B A;  1O7X A;  1IXE A;  1OWB A;  4JAE A;  5CSC A;  1OWC A;  2IBP A;  1VGP A;  6CTS A;  3ENJ A;  2P2W A;  1VGM A;  3MSU A;  1AL6 A;  1CSS A;  1CSH A;  2R9E A;  5CTS A;  3CSC A;  1CTS A;  6CSC A;  4JAD A;  3O8J A;  5CSC B;  1CSR A;  2IFC A;  1NXG A;  2H12 A;  1IOM A;  4YBO A;  4JAF A;  3HWK A;  4TVM A;  4XGH A;  2C6X A; 
#chains in the Genus database with same CATH topology
 1A59 A;  1NXE A;  4CTS A;  1CSI A;  2CTS A;  3TQG A;  2CSC A;  4JAG A;  1CSC A;  1AJ8 A;  4CSC A;  4E6Y A;  2R26 A;  1AMZ A;  4G6B A;  1O7X A;  1IXE A;  1OWB A;  4JAE A;  5CSC A;  1OWC A;  2IBP A;  1VGP A;  6CTS A;  3ENJ A;  2P2W A;  1VGM A;  3MSU A;  1AL6 A;  1CSS A;  1CSH A;  2R9E A;  5CTS A;  3CSC A;  1CTS A;  6CSC A;  4JAD A;  3O8J A;  5CSC B;  1CSR A;  2IFC A;  1NXG A;  2H12 A;  1IOM A;  4YBO A;  4JAF A;  3HWK A;  4TVM A;  4XGH A;  2C6X A; 
#chains in the Genus database with same CATH homology
 1A59 A;  1NXE A;  4CTS A;  1CSI A;  2CTS A;  3TQG A;  2CSC A;  4JAG A;  1CSC A;  1AJ8 A;  4CSC A;  4E6Y A;  2R26 A;  1AMZ A;  4G6B A;  1O7X A;  1IXE A;  1OWB A;  4JAE A;  5CSC A;  1OWC A;  2IBP A;  1VGP A;  6CTS A;  3ENJ A;  2P2W A;  1VGM A;  3MSU A;  1AL6 A;  1CSS A;  1CSH A;  2R9E A;  5CTS A;  3CSC A;  1CTS A;  6CSC A;  4JAD A;  3O8J A;  5CSC B;  1CSR A;  2IFC A;  1NXG A;  2H12 A;  1IOM A;  4YBO A;  4JAF A;  3HWK A;  4TVM A;  4XGH A;  2C6X A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...