5CZNA

2009 h1n1 pa endonuclease mutant e119d
Total Genus 68
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
68
sequence length
179
structure length
179
Chain Sequence
GSHMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDGGSKHRFEIIEGRDRIMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIDIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Influenza a virus
publication title Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
pubmed doi rcsb
molecule keywords Polymerase acidic protein
total genus 68
structure length 179
sequence length 179
ec nomenclature ec 3.1.-.-:
pdb deposition date 2015-07-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.91.90 Alpha Beta 3-Layer(aba) Sandwich Restriction Endonuclease Restriction Endonuclease 5cznA00
4CGSA 4E5GA 5DBSA 4AWKA 4CHCA 4E5LA 3HW4A 5JHVA 4E5JA 5DESA 4AWFA 4ZI0A 5I13A 5CGVA 5EGAA 5JHTA 5CL0A 4E5HA 4AWGA 4AVGA 5FDGA 4AVQA 5CCYA 4ZQQA 4AWMA 4E5EA 4E5FA 4AWHA 5D9JA 4AVLA 5D8UA 3HW6A 4CGXA 4ZHZA 5CZNA 4NFZA 3HW5A 5D4GA 4E5IA 5D42A 5DEBA 3HW3A 5D2OA 5FDDA 3EBJA 4YYLA
chains in the Genus database with same CATH superfamily
1KNVA 4AWKA 4CHCA 3HW4A 2PFJA 3DVOA 5CGVA 5JHTA 3WVHA 3ODHA 3CAEA 5CL0A 3MQYA 2P0JA 1M0IA 3WVGA 4AVQA 4E5FA 1M0DA 4AVLA 4CGXA 4ZHZA 1BAMA 1D2IA 2E52A 4CGSA 4F0QA 5DESA 5I13A 3BAMA 4AVGA 5FDGA 1FOKA 4AWMA 3V20A 1BHMA 5D8UA 2XI5A 4R28A 5CZNA 3WVPA 5D4GA 3HW3A 5FDDA 3EBJA 4YYLA 5DBSA 2XI7A 1VRRA 1FZRA 4E5LA 3WVIA 4ZI0A 5EGAA 2FQZA 2EWFA 2P14A 3A4KA 3V21A 4ZQQA 1SDOA 5D9JA 3DPGA 3BM3A 4NFZA 3N78A 5D42A 2BAMA 3DW9A 3WVKA 3N7BA 4E5GA 1ES8A 5JHVA 4E5JA 4AWFA 3MQ6A 4E5HA 4AWGA 1ESGA 2GB7A 2FOKA 5CCYA 4F0PA 4E5EA 4OC8A 4AWHA 3HW6A 1DC1A 3V1ZA 1DFMA 3HW5A 4E5IA 1CFRA 5DEBA 5D2OA
chains in the Genus database with same CATH topology
1KNVA 4AWKA 4CHCA 3HW4A 2PFJA 3DVOA 5CGVA 5JHTA 3WVHA 3ODHA 3CAEA 5CL0A 3MQYA 2P0JA 1M0IA 3WVGA 4AVQA 4E5FA 1M0DA 4AVLA 4CGXA 4ZHZA 1BAMA 1D2IA 2E52A 4CGSA 4F0QA 5DESA 5I13A 3BAMA 4AVGA 5FDGA 1FOKA 4AWMA 3V20A 1BHMA 5D8UA 2XI5A 4R28A 5CZNA 3WVPA 5D4GA 3HW3A 5FDDA 3EBJA 4YYLA 5DBSA 2XI7A 1VRRA 1FZRA 4E5LA 3WVIA 4ZI0A 5EGAA 2FQZA 2EWFA 2P14A 3A4KA 3V21A 4ZQQA 1SDOA 5D9JA 3DPGA 3BM3A 4NFZA 3N78A 5D42A 2BAMA 3DW9A 3WVKA 3N7BA 4E5GA 1ES8A 5JHVA 4E5JA 4AWFA 3MQ6A 4E5HA 4AWGA 1ESGA 2GB7A 2FOKA 5CCYA 4F0PA 4E5EA 4OC8A 4AWHA 3HW6A 1DC1A 3V1ZA 1DFMA 3HW5A 4E5IA 1CFRA 5DEBA 5D2OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CGS A;  4E5G A;  5DBS A;  4AWK A;  4CHC A;  4E5L A;  3HW4 A;  5JHV A;  4E5J A;  5DES A;  4AWF A;  4ZI0 A;  5I13 A;  5CGV A;  5EGA A;  5JHT A;  5CL0 A;  4E5H A;  4AWG A;  4AVG A;  5FDG A;  4AVQ A;  5CCY A;  4ZQQ A;  4AWM A;  4E5E A;  4E5F A;  4AWH A;  5D9J A;  4AVL A;  5D8U A;  3HW6 A;  4CGX A;  4ZHZ A;  5CZN A;  4NFZ A;  3HW5 A;  5D4G A;  4E5I A;  5D42 A;  5DEB A;  3HW3 A;  5D2O A;  5FDD A;  3EBJ A;  4YYL A; 
#chains in the Genus database with same CATH topology
 1KNV A;  4AWK A;  4CHC A;  3HW4 A;  2PFJ A;  3DVO A;  5CGV A;  5JHT A;  3WVH A;  3ODH A;  3CAE A;  5CL0 A;  3MQY A;  2P0J A;  1M0I A;  3WVG A;  4AVQ A;  4E5F A;  1M0D A;  4AVL A;  4CGX A;  4ZHZ A;  1BAM A;  1D2I A;  2E52 A;  4CGS A;  4F0Q A;  5DES A;  5I13 A;  3BAM A;  4AVG A;  5FDG A;  1FOK A;  4AWM A;  3V20 A;  1BHM A;  5D8U A;  2XI5 A;  4R28 A;  5CZN A;  3WVP A;  5D4G A;  3HW3 A;  5FDD A;  3EBJ A;  4YYL A;  5DBS A;  2XI7 A;  1VRR A;  1FZR A;  4E5L A;  3WVI A;  4ZI0 A;  5EGA A;  2FQZ A;  2EWF A;  2P14 A;  3A4K A;  3V21 A;  4ZQQ A;  1SDO A;  5D9J A;  3DPG A;  3BM3 A;  4NFZ A;  3N78 A;  5D42 A;  2BAM A;  3DW9 A;  3WVK A;  3N7B A;  4E5G A;  1ES8 A;  5JHV A;  4E5J A;  4AWF A;  3MQ6 A;  4E5H A;  4AWG A;  1ESG A;  2GB7 A;  2FOK A;  5CCY A;  4F0P A;  4E5E A;  4OC8 A;  4AWH A;  3HW6 A;  1DC1 A;  3V1Z A;  1DFM A;  3HW5 A;  4E5I A;  1CFR A;  5DEB A;  5D2O A; 
#chains in the Genus database with same CATH homology
 1KNV A;  4AWK A;  4CHC A;  3HW4 A;  2PFJ A;  3DVO A;  5CGV A;  5JHT A;  3WVH A;  3ODH A;  3CAE A;  5CL0 A;  3MQY A;  2P0J A;  1M0I A;  3WVG A;  4AVQ A;  4E5F A;  1M0D A;  4AVL A;  4CGX A;  4ZHZ A;  1BAM A;  1D2I A;  2E52 A;  4CGS A;  4F0Q A;  5DES A;  5I13 A;  3BAM A;  4AVG A;  5FDG A;  1FOK A;  4AWM A;  3V20 A;  1BHM A;  5D8U A;  2XI5 A;  4R28 A;  5CZN A;  3WVP A;  5D4G A;  3HW3 A;  5FDD A;  3EBJ A;  4YYL A;  5DBS A;  2XI7 A;  1VRR A;  1FZR A;  4E5L A;  3WVI A;  4ZI0 A;  5EGA A;  2FQZ A;  2EWF A;  2P14 A;  3A4K A;  3V21 A;  4ZQQ A;  1SDO A;  5D9J A;  3DPG A;  3BM3 A;  4NFZ A;  3N78 A;  5D42 A;  2BAM A;  3DW9 A;  3WVK A;  3N7B A;  4E5G A;  1ES8 A;  5JHV A;  4E5J A;  4AWF A;  3MQ6 A;  4E5H A;  4AWG A;  1ESG A;  2GB7 A;  2FOK A;  5CCY A;  4F0P A;  4E5E A;  4OC8 A;  4AWH A;  3HW6 A;  1DC1 A;  3V1Z A;  1DFM A;  3HW5 A;  4E5I A;  1CFR A;  5DEB A;  5D2O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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