5E64A

Hemagglutinin-esterase-fusion protein structure of influenza d virus
Total Genus 121
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
121
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDSRTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEADDNHGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
molecule tags Hydrolase
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
molecule keywords Hemagglutinin-esterase
total genus 121
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e64A01
5E64A 1FLCA 5E66A 5E62A 5E65A 5E5WA
chains in the Genus database with same CATH superfamily
2XP4A 3L4HA 3FSBA 2XPBA 1WR7A 5E66A 4U86A 3KAGA 2YSBA 1EG3A 2RE3A 5E5WA 1WMVA 5E64A 2JXWA 3M85A 4A0TA 2JX8A 5E62A 1JMQA 2M3OW 3PQHA 2ZR5A 2LAJA 2XP8A 3KADA 3OOBA 1ZCNA 2YAJB 2YSFA 2MDIA 2ZQTA 2JMFA 5AHTA 2E45A 1NMVA 2WADA 3MQHA 3TCZA 1K9QA 2F21A 2XPAA 2DJYA 1TK7A 3LKXA 2DK7A 4U84A 2ZR4A 2ZR6A 2Q5AA 3WH0A 3CNGA 3LE4A 1F8AB 3KAFA 3TC5A 2QRVA 2XP7A 4QIBA 2XP9A 2XP6A 2ZQUA 3FS8A 4A0UA 2BA1A 1RP5A 3KAIA 2OWOA 2DK1A 3M7NA 1PINA 2XP5A 2KXQA 2WAEA 3MCBB 2ZQSA 2YSGA 1K9RA 1EG4A 2EZ5W 3KABA 3ODKA 2Y8NB 5CQ2A 4REXA 2ZQVA 2ITKA 3NTPA 2DWVA 3KAHA 1O6WA 5U47A 3MQGA 2YSHA 1FLCA 4E5RA 4U85A 2XP3A 1YW5A 3MCBA 3TDBA 5E65A 2M8IA 2JV4A 3FSCA 3KCEA 3LKXB 2ZAJA 2L4JA 4GLXA 1TR8A 2M8JA 1I5HW 2DMVA 2YSIA
chains in the Genus database with same CATH topology
2XP4A 3L4HA 3FSBA 2XPBA 1WR7A 5E66A 4U86A 3KAGA 2YSBA 1EG3A 2RE3A 5E5WA 1WMVA 5E64A 2JXWA 3M85A 4A0TA 2JX8A 5E62A 1JMQA 2M3OW 3PQHA 2ZR5A 2LAJA 2XP8A 3KADA 3OOBA 1ZCNA 2YAJB 2YSFA 2MDIA 2ZQTA 2JMFA 5AHTA 2E45A 1NMVA 2WADA 3MQHA 3TCZA 1K9QA 2F21A 2XPAA 2DJYA 1TK7A 3LKXA 2DK7A 4U84A 2ZR4A 2ZR6A 2Q5AA 3WH0A 3CNGA 3LE4A 1F8AB 3KAFA 3TC5A 2QRVA 2XP7A 4QIBA 2XP9A 2XP6A 2ZQUA 3FS8A 4A0UA 2BA1A 1RP5A 3KAIA 2OWOA 2DK1A 3M7NA 1PINA 2XP5A 2KXQA 2WAEA 3MCBB 2ZQSA 2YSGA 1K9RA 1EG4A 2EZ5W 3KABA 3ODKA 2Y8NB 5CQ2A 4REXA 2ZQVA 2ITKA 3NTPA 2DWVA 3KAHA 1O6WA 5U47A 3MQGA 2YSHA 1FLCA 4E5RA 4U85A 2XP3A 1YW5A 3MCBA 3TDBA 5E65A 2M8IA 2JV4A 3FSCA 3KCEA 3LKXB 2ZAJA 2L4JA 4GLXA 1TR8A 2M8JA 1I5HW 2DMVA 2YSIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E64 A;  1FLC A;  5E66 A;  5E62 A;  5E65 A;  5E5W A; 
#chains in the Genus database with same CATH topology
 2XP4 A;  3L4H A;  3FSB A;  2XPB A;  1WR7 A;  5E66 A;  4U86 A;  3KAG A;  2YSB A;  1EG3 A;  2RE3 A;  5E5W A;  1WMV A;  5E64 A;  2JXW A;  3M85 A;  4A0T A;  2JX8 A;  5E62 A;  1JMQ A;  2M3O W;  3PQH A;  2ZR5 A;  2LAJ A;  2XP8 A;  3KAD A;  3OOB A;  1ZCN A;  2YAJ B;  2YSF A;  2MDI A;  2ZQT A;  2JMF A;  5AHT A;  2E45 A;  1NMV A;  2WAD A;  3MQH A;  3TCZ A;  1K9Q A;  2F21 A;  2XPA A;  2DJY A;  1TK7 A;  3LKX A;  2DK7 A;  4U84 A;  2ZR4 A;  2ZR6 A;  2Q5A A;  3WH0 A;  3CNG A;  3LE4 A;  1F8A B;  3KAF A;  3TC5 A;  2QRV A;  2XP7 A;  4QIB A;  2XP9 A;  2XP6 A;  2ZQU A;  3FS8 A;  4A0U A;  2BA1 A;  1RP5 A;  3KAI A;  2OWO A;  2DK1 A;  3M7N A;  1PIN A;  2XP5 A;  2KXQ A;  2WAE A;  3MCB B;  2ZQS A;  2YSG A;  1K9R A;  1EG4 A;  2EZ5 W;  3KAB A;  3ODK A;  2Y8N B;  5CQ2 A;  4REX A;  2ZQV A;  2ITK A;  3NTP A;  2DWV A;  3KAH A;  1O6W A;  5U47 A;  3MQG A;  2YSH A;  1FLC A;  4E5R A;  4U85 A;  2XP3 A;  1YW5 A;  3MCB A;  3TDB A;  5E65 A;  2M8I A;  2JV4 A;  3FSC A;  3KCE A;  3LKX B;  2ZAJ A;  2L4J A;  4GLX A;  1TR8 A;  2M8J A;  1I5H W;  2DMV A;  2YSI A; 
#chains in the Genus database with same CATH homology
 2XP4 A;  3L4H A;  3FSB A;  2XPB A;  1WR7 A;  5E66 A;  4U86 A;  3KAG A;  2YSB A;  1EG3 A;  2RE3 A;  5E5W A;  1WMV A;  5E64 A;  2JXW A;  3M85 A;  4A0T A;  2JX8 A;  5E62 A;  1JMQ A;  2M3O W;  3PQH A;  2ZR5 A;  2LAJ A;  2XP8 A;  3KAD A;  3OOB A;  1ZCN A;  2YAJ B;  2YSF A;  2MDI A;  2ZQT A;  2JMF A;  5AHT A;  2E45 A;  1NMV A;  2WAD A;  3MQH A;  3TCZ A;  1K9Q A;  2F21 A;  2XPA A;  2DJY A;  1TK7 A;  3LKX A;  2DK7 A;  4U84 A;  2ZR4 A;  2ZR6 A;  2Q5A A;  3WH0 A;  3CNG A;  3LE4 A;  1F8A B;  3KAF A;  3TC5 A;  2QRV A;  2XP7 A;  4QIB A;  2XP9 A;  2XP6 A;  2ZQU A;  3FS8 A;  4A0U A;  2BA1 A;  1RP5 A;  3KAI A;  2OWO A;  2DK1 A;  3M7N A;  1PIN A;  2XP5 A;  2KXQ A;  2WAE A;  3MCB B;  2ZQS A;  2YSG A;  1K9R A;  1EG4 A;  2EZ5 W;  3KAB A;  3ODK A;  2Y8N B;  5CQ2 A;  4REX A;  2ZQV A;  2ITK A;  3NTP A;  2DWV A;  3KAH A;  1O6W A;  5U47 A;  3MQG A;  2YSH A;  1FLC A;  4E5R A;  4U85 A;  2XP3 A;  1YW5 A;  3MCB A;  3TDB A;  5E65 A;  2M8I A;  2JV4 A;  3FSC A;  3KCE A;  3LKX B;  2ZAJ A;  2L4J A;  4GLX A;  1TR8 A;  2M8J A;  1I5H W;  2DMV A;  2YSI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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