5ETEA

Structure of pathogen-related yeast protein, pry1 in complex with a competitive inhibitor of cholesterol binding
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
142
structure length
142
Chain Sequence
DLSDFASSVLAEHNKKRALHKDTPALSWSDTLASYAQDYADNYDCSGTLTHSGGPYGENLALGYDGPAAVDAWYNEISNYDFSNPGFSSNTGHFTQVVWKSTTQVGCGIKTCGGAWGDYVICSYDPAGNYEGEYADNVEPLA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Sterol binding protein
molecule keywords Pry1p
publication title Structural and functional characterization of the CAP domain of pathogen-related yeast 1 (Pry1) protein.
pubmed doi rcsb
source organism Saccharomyces cerevisiae yjm1434
total genus 43
structure length 142
sequence length 142
ec nomenclature
pdb deposition date 2015-11-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.33.10 Alpha Beta 3-Layer(aba) Sandwich Pathogenesis-related Protein p14a CAP 5eteA00
3S6SA 4G2UA 3Q2RA 3U3UC 1WVRA 4TPVA 3S6UA 4P27A 3MZ8A 2DDAA 4NUKA 4H0AA 3Q2UA 2EPFA 3S6VA 2GIZA 4NUNA 5JYSA 1XTAA 1RC9A 3NT8A 4NUIA 1XX5A 2VZNA 1U53A 4AIWA 4D53A 1QNXA 5ETEA 4IFAA 1CFEA 4NUOA 3U3NC 4LY5A 1SMBA 3U3LC 2DDBA
chains in the Genus database with same CATH superfamily
3S6SA 4G2UA 3Q2RA 3U3UC 1WVRA 4TPVA 3S6UA 4P27A 3MZ8A 2DDAA 4NUKA 4H0AA 3Q2UA 2EPFA 3S6VA 2GIZA 4NUNA 5JYSA 1XTAA 1RC9A 3NT8A 4NUIA 1XX5A 2VZNA 1U53A 4AIWA 4D53A 1QNXA 5ETEA 4IFAA 1CFEA 4NUOA 3U3NC 4LY5A 1SMBA 3U3LC 2DDBA
chains in the Genus database with same CATH topology
3S6SA 4G2UA 3Q2RA 3U3UC 1WVRA 4TPVA 3S6UA 4P27A 3MZ8A 2DDAA 4NUKA 4H0AA 3Q2UA 2EPFA 3S6VA 2GIZA 4NUNA 5JYSA 1XTAA 1RC9A 3NT8A 4NUIA 1XX5A 2VZNA 1U53A 4AIWA 4D53A 1QNXA 5ETEA 4IFAA 1CFEA 4NUOA 3U3NC 4LY5A 1SMBA 3U3LC 2DDBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S6S A;  4G2U A;  3Q2R A;  3U3U C;  1WVR A;  4TPV A;  3S6U A;  4P27 A;  3MZ8 A;  2DDA A;  4NUK A;  4H0A A;  3Q2U A;  2EPF A;  3S6V A;  2GIZ A;  4NUN A;  5JYS A;  1XTA A;  1RC9 A;  3NT8 A;  4NUI A;  1XX5 A;  2VZN A;  1U53 A;  4AIW A;  4D53 A;  1QNX A;  5ETE A;  4IFA A;  1CFE A;  4NUO A;  3U3N C;  4LY5 A;  1SMB A;  3U3L C;  2DDB A; 
#chains in the Genus database with same CATH topology
 3S6S A;  4G2U A;  3Q2R A;  3U3U C;  1WVR A;  4TPV A;  3S6U A;  4P27 A;  3MZ8 A;  2DDA A;  4NUK A;  4H0A A;  3Q2U A;  2EPF A;  3S6V A;  2GIZ A;  4NUN A;  5JYS A;  1XTA A;  1RC9 A;  3NT8 A;  4NUI A;  1XX5 A;  2VZN A;  1U53 A;  4AIW A;  4D53 A;  1QNX A;  5ETE A;  4IFA A;  1CFE A;  4NUO A;  3U3N C;  4LY5 A;  1SMB A;  3U3L C;  2DDB A; 
#chains in the Genus database with same CATH homology
 3S6S A;  4G2U A;  3Q2R A;  3U3U C;  1WVR A;  4TPV A;  3S6U A;  4P27 A;  3MZ8 A;  2DDA A;  4NUK A;  4H0A A;  3Q2U A;  2EPF A;  3S6V A;  2GIZ A;  4NUN A;  5JYS A;  1XTA A;  1RC9 A;  3NT8 A;  4NUI A;  1XX5 A;  2VZN A;  1U53 A;  4AIW A;  4D53 A;  1QNX A;  5ETE A;  4IFA A;  1CFE A;  4NUO A;  3U3N C;  4LY5 A;  1SMB A;  3U3L C;  2DDB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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