5EUUA

Rat prestin stas domain in complex with chloride
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
143
structure length
129
Chain Sequence
SPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYNIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTSNRFFENPALKELLFHSIHDAVLGSQVREA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Prestin,Prestin
publication title The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 42
structure length 129
sequence length 143
ec nomenclature
pdb deposition date 2015-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 5euuA00
2KLNA 2VY9A 1SBOA 3IHAA 4HYLA 2KA5A 1H4XA 3T6OA 5EUXA 3F43A 5EUSA 1TH8B 3IH9A 3LKLA 3MGLA 3IH8A 1AUZA 1TILB 1H4YA 1BUZA 3OIRA 4DGFA 5EUZA 4DGHA 3OIZA 3IF5A 3LLOA 3ZXNA 1THNB 5EZBA 5EUUA 1T6RA 1H4ZA 1VC1A 3ZTBA 4QTPA 3AGEA 1TIDB 4XS5A 3AGDA 5EUWA 3NY7A 3IHBA
chains in the Genus database with same CATH superfamily
4HYLA 2VY9A 1N6DA 1WXWA 3DJAA 3IH9A 3GK7A 3MGLA 3IH8A 1FC9A 1TILB 3K50A 3OIZA 3V8VA 3GVLA 1THNB 1K32A 2RRLA 5EUUA 2B78A 1H4ZA 3D3UA 3GVKA 1N6FA 1TIDB 1V0EA 3DORA 1SBOA 1FC6A 4AE2A 1H4XA 5EUXA 2OASA 1HF2A 2DXNA 3LKLA 4JC0A 1WXXA 1FC7A 1BPLA 3JU4A 1FCFA 3IF5A 4L8KA 3LDFA 4AEJA 3AGEA 5EUWA 3GHFA 4QTPA 3EH7A 3MOGA 2KA5A 3VSEA 3QDQA 3T6OA 2ZO9B 3GMFA 1TH8B 1BUZA 4DGFA 3V97A 5EUZA 3ZXNA 1J7XA 5EZBA 3C0KA 3ZTBA 4XS5A 3AGDA 3NY7A 3IHBA 2ZOAA 4GHNA 2KLNA 3IHAA 1V0FA 3F43A 5EUSA 2CWWA 1AUZA 4DMGA 1H4YA 3OIRA 3GVJA 4DGHA 4L1CA 2DXLA 3LLOA 1T6RA 3DUPA 1N6EA 1VC1A 4HIZA 2AS0A 3D03A
chains in the Genus database with same CATH topology
2KLNA 2VY9A 1SBOA 3IHAA 4HYLA 2KA5A 1H4XA 3T6OA 5EUXA 3F43A 5EUSA 1TH8B 3IH9A 3LKLA 3MGLA 3IH8A 1AUZA 1TILB 1H4YA 1BUZA 3OIRA 4DGFA 5EUZA 4DGHA 3OIZA 3IF5A 3LLOA 3ZXNA 1THNB 5EZBA 5EUUA 1T6RA 1H4ZA 1VC1A 3ZTBA 4QTPA 3AGEA 1TIDB 4XS5A 3AGDA 5EUWA 3NY7A 3IHBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KLN A;  2VY9 A;  1SBO A;  3IHA A;  4HYL A;  2KA5 A;  1H4X A;  3T6O A;  5EUX A;  3F43 A;  5EUS A;  1TH8 B;  3IH9 A;  3LKL A;  3MGL A;  3IH8 A;  1AUZ A;  1TIL B;  1H4Y A;  1BUZ A;  3OIR A;  4DGF A;  5EUZ A;  4DGH A;  3OIZ A;  3IF5 A;  3LLO A;  3ZXN A;  1THN B;  5EZB A;  5EUU A;  1T6R A;  1H4Z A;  1VC1 A;  3ZTB A;  4QTP A;  3AGE A;  1TID B;  4XS5 A;  3AGD A;  5EUW A;  3NY7 A;  3IHB A; 
#chains in the Genus database with same CATH topology
 4HYL A;  2VY9 A;  1N6D A;  1WXW A;  3DJA A;  3IH9 A;  3GK7 A;  3MGL A;  3IH8 A;  1FC9 A;  1TIL B;  3K50 A;  3OIZ A;  3V8V A;  3GVL A;  1THN B;  1K32 A;  2RRL A;  5EUU A;  2B78 A;  1H4Z A;  3D3U A;  3GVK A;  1N6F A;  1TID B;  1V0E A;  3DOR A;  1SBO A;  1FC6 A;  4AE2 A;  1H4X A;  5EUX A;  2OAS A;  1HF2 A;  2DXN A;  3LKL A;  4JC0 A;  1WXX A;  1FC7 A;  1BPL A;  3JU4 A;  1FCF A;  3IF5 A;  4L8K A;  3LDF A;  4AEJ A;  3AGE A;  5EUW A;  3GHF A;  4QTP A;  3EH7 A;  3MOG A;  2KA5 A;  3VSE A;  3QDQ A;  3T6O A;  2ZO9 B;  3GMF A;  1TH8 B;  1BUZ A;  4DGF A;  3V97 A;  5EUZ A;  3ZXN A;  1J7X A;  5EZB A;  3C0K A;  3ZTB A;  4XS5 A;  3AGD A;  3NY7 A;  3IHB A;  2ZOA A;  4GHN A;  2KLN A;  3IHA A;  1V0F A;  3F43 A;  5EUS A;  2CWW A;  1AUZ A;  4DMG A;  1H4Y A;  3OIR A;  3GVJ A;  4DGH A;  4L1C A;  2DXL A;  3LLO A;  1T6R A;  3DUP A;  1N6E A;  1VC1 A;  4HIZ A;  2AS0 A;  3D03 A; 
#chains in the Genus database with same CATH homology
 2KLN A;  2VY9 A;  1SBO A;  3IHA A;  4HYL A;  2KA5 A;  1H4X A;  3T6O A;  5EUX A;  3F43 A;  5EUS A;  1TH8 B;  3IH9 A;  3LKL A;  3MGL A;  3IH8 A;  1AUZ A;  1TIL B;  1H4Y A;  1BUZ A;  3OIR A;  4DGF A;  5EUZ A;  4DGH A;  3OIZ A;  3IF5 A;  3LLO A;  3ZXN A;  1THN B;  5EZB A;  5EUU A;  1T6R A;  1H4Z A;  1VC1 A;  3ZTB A;  4QTP A;  3AGE A;  1TID B;  4XS5 A;  3AGD A;  5EUW A;  3NY7 A;  3IHB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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