5FIWC

Crystal structure of human myeloperoxidase at 1.7 angstroms resolution
Total Genus 146
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
146
sequence length
464
structure length
463
Chain Sequence
NCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWRE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxidoreductase
molecule keywords MYELOPEROXIDASE
publication title Crystal Structure of Human Myeloperoxidase at 1.7 Angstroms Resolution
rcsb
total genus 146
structure length 463
sequence length 464
chains with identical sequence D
ec nomenclature ec 1.11.2.2: Myeloperoxidase.
pdb deposition date 2015-10-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 5fiwC00
2O86A 4E1GA 1D2VC 1U67A 1HT5A 3GCKA 3N8YB 5F19A 1Q4GA 3HS7A 2EFBA 3MQEA 4RUTA 2Z5ZA 1DNUC 3F9PC 3OGWA 4RRYA 3GC1A 2QRBA 3PY4A 1PRHA 3R4XA 3N8WB 2OYUP 1CVUA 2R5LA 3LN0A 4OEKA 4OTJA 3N8FA 5IKQA 4O1ZA 5JVYA 4KSZA 3N8YA 3NYHA 1EQHA 3Q9KA 3V6QA 3GCLA 3ERHA 3NAKA 4RRWA 2OYEP 3KRKA 3QL6A 4IG5A 3N8WA 3MDLA 3OLTA 3N8ZA 3OLUA 1CX2A 4KVKA 1DIYA 4MSFA 4PH9A 3N8VA 5COXA 4LJJA 4COXA 1EBVA 1DDXA 4RRXA 2EHAA 3I6NA 1MYPC 5IKRA 2OJVA 4OTYA 1MHLC 1EQGA 4DL1C 5KIRA 6COXA 2PUMA 2QPKA 3LN1A 5IKTA 2IPSA 4N7AA 5JW1A 3QMOA 3FAQA 2QQTA 3KRQA 4Y55A 3ZS0C 1HT8A 3R55A 3NTBA 3PGHA 1CXPC 3NTGA 3QF1A 1PTHA 4RRZA 4KVJA 3RR3A 3KK6A 5GLSA 4RS0A 3RKEA 3TGYA 5JVZA 4NJBA 3NT1A 1D5LC 3UBAA 3R5QA 4FM5A 3FNLA 4QYQA 1IGZA 5IKVA 1FE2A 4KVLA 4GN6A 3Q7DA 1DNWC 2GJMA 2E9EA 3HS6A 5HPWA 3QH0A 2PT3A 4M10A 4NT3A 3GCJA 3SXVA 2IKCA 5F1AA 4C1MC 5B72A 3ZS1C 4GM7A 3HS5A 3N8XA 4PNXA 5FDQA 3S4FA 3TZIA 5FF1A 5FIWC 3R5OA 4HHRA 4HHSA 1IGXA 3ERIA 4Z0LA 2NQXA 1D7WC 5GH0A 1PGEA 3NIUA 4QJQA 1CQEA 3BXIA 4M11A 1PXXA 2AYLA
chains in the Genus database with same CATH superfamily
2O86A 4E1GA 1D2VC 1U67A 1HT5A 3GCKA 3N8YB 5F19A 1Q4GA 3HS7A 2EFBA 3MQEA 4RUTA 2Z5ZA 1DNUC 3F9PC 3OGWA 4RRYA 3GC1A 2QRBA 3PY4A 1PRHA 3R4XA 3N8WB 2OYUP 1CVUA 2R5LA 3LN0A 4OEKA 4OTJA 3N8FA 5IKQA 4O1ZA 5JVYA 4KSZA 3N8YA 3NYHA 1EQHA 3Q9KA 3V6QA 3GCLA 3ERHA 3NAKA 4RRWA 2OYEP 3KRKA 3QL6A 4IG5A 3N8WA 3MDLA 3OLTA 3N8ZA 3OLUA 1CX2A 4KVKA 1DIYA 4MSFA 4PH9A 3N8VA 5COXA 4LJJA 4COXA 1EBVA 1DDXA 4RRXA 2EHAA 3I6NA 1MYPC 5IKRA 2OJVA 4OTYA 1MHLC 1EQGA 4DL1C 5KIRA 6COXA 2PUMA 2QPKA 3LN1A 5IKTA 2IPSA 4N7AA 5JW1A 3QMOA 3FAQA 2QQTA 3KRQA 4Y55A 3ZS0C 1HT8A 3R55A 3NTBA 3PGHA 1CXPC 3NTGA 3QF1A 1PTHA 4RRZA 4KVJA 3RR3A 3KK6A 5GLSA 4RS0A 3RKEA 3TGYA 5JVZA 4NJBA 3NT1A 1D5LC 3UBAA 3R5QA 4FM5A 3FNLA 4QYQA 1IGZA 5IKVA 1FE2A 4KVLA 4GN6A 3Q7DA 1DNWC 2GJMA 2E9EA 3HS6A 5HPWA 3QH0A 2PT3A 4M10A 4NT3A 3GCJA 3SXVA 2IKCA 5F1AA 4C1MC 5B72A 3ZS1C 4GM7A 3HS5A 3N8XA 4PNXA 5FDQA 3S4FA 3TZIA 5FF1A 5FIWC 3R5OA 4HHRA 4HHSA 1IGXA 3ERIA 4Z0LA 2NQXA 1D7WC 5GH0A 1PGEA 3NIUA 4QJQA 1CQEA 3BXIA 4M11A 1PXXA 2AYLA
chains in the Genus database with same CATH topology
2O86A 4E1GA 1D2VC 1U67A 1HT5A 3GCKA 3N8YB 5F19A 1Q4GA 3HS7A 2EFBA 3MQEA 4RUTA 2Z5ZA 1DNUC 3F9PC 3OGWA 4RRYA 3GC1A 2QRBA 3PY4A 1PRHA 3R4XA 3N8WB 2OYUP 1CVUA 2R5LA 3LN0A 4OEKA 4OTJA 3N8FA 5IKQA 4O1ZA 5JVYA 4KSZA 3N8YA 3NYHA 1EQHA 3Q9KA 3V6QA 3GCLA 3ERHA 3NAKA 4RRWA 2OYEP 3KRKA 3QL6A 4IG5A 3N8WA 3MDLA 3OLTA 3N8ZA 3OLUA 1CX2A 4KVKA 1DIYA 4MSFA 4PH9A 3N8VA 5COXA 4LJJA 4COXA 1EBVA 1DDXA 4RRXA 2EHAA 3I6NA 1MYPC 5IKRA 2OJVA 4OTYA 1MHLC 1EQGA 4DL1C 5KIRA 6COXA 2PUMA 2QPKA 3LN1A 5IKTA 2IPSA 4N7AA 5JW1A 3QMOA 3FAQA 2QQTA 3KRQA 4Y55A 3ZS0C 1HT8A 3R55A 3NTBA 3PGHA 1CXPC 3NTGA 3QF1A 1PTHA 4RRZA 4KVJA 3RR3A 3KK6A 5GLSA 4RS0A 3RKEA 3TGYA 5JVZA 4NJBA 3NT1A 1D5LC 3UBAA 3R5QA 4FM5A 3FNLA 4QYQA 1IGZA 5IKVA 1FE2A 4KVLA 4GN6A 3Q7DA 1DNWC 2GJMA 2E9EA 3HS6A 5HPWA 3QH0A 2PT3A 4M10A 4NT3A 3GCJA 3SXVA 2IKCA 5F1AA 4C1MC 5B72A 3ZS1C 4GM7A 3HS5A 3N8XA 4PNXA 5FDQA 3S4FA 3TZIA 5FF1A 5FIWC 3R5OA 4HHRA 4HHSA 1IGXA 3ERIA 4Z0LA 2NQXA 1D7WC 5GH0A 1PGEA 3NIUA 4QJQA 1CQEA 3BXIA 4M11A 1PXXA 2AYLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2O86 A;  4E1G A;  1D2V C;  1U67 A;  1HT5 A;  3GCK A;  3N8Y B;  5F19 A;  1Q4G A;  3HS7 A;  2EFB A;  3MQE A;  4RUT A;  2Z5Z A;  1DNU C;  3F9P C;  3OGW A;  4RRY A;  3GC1 A;  2QRB A;  3PY4 A;  1PRH A;  3R4X A;  3N8W B;  2OYU P;  1CVU A;  2R5L A;  3LN0 A;  4OEK A;  4OTJ A;  3N8F A;  5IKQ A;  4O1Z A;  5JVY A;  4KSZ A;  3N8Y A;  3NYH A;  1EQH A;  3Q9K A;  3V6Q A;  3GCL A;  3ERH A;  3NAK A;  4RRW A;  2OYE P;  3KRK A;  3QL6 A;  4IG5 A;  3N8W A;  3MDL A;  3OLT A;  3N8Z A;  3OLU A;  1CX2 A;  4KVK A;  1DIY A;  4MSF A;  4PH9 A;  3N8V A;  5COX A;  4LJJ A;  4COX A;  1EBV A;  1DDX A;  4RRX A;  2EHA A;  3I6N A;  1MYP C;  5IKR A;  2OJV A;  4OTY A;  1MHL C;  1EQG A;  4DL1 C;  5KIR A;  6COX A;  2PUM A;  2QPK A;  3LN1 A;  5IKT A;  2IPS A;  4N7A A;  5JW1 A;  3QMO A;  3FAQ A;  2QQT A;  3KRQ A;  4Y55 A;  3ZS0 C;  1HT8 A;  3R55 A;  3NTB A;  3PGH A;  1CXP C;  3NTG A;  3QF1 A;  1PTH A;  4RRZ A;  4KVJ A;  3RR3 A;  3KK6 A;  5GLS A;  4RS0 A;  3RKE A;  3TGY A;  5JVZ A;  4NJB A;  3NT1 A;  1D5L C;  3UBA A;  3R5Q A;  4FM5 A;  3FNL A;  4QYQ A;  1IGZ A;  5IKV A;  1FE2 A;  4KVL A;  4GN6 A;  3Q7D A;  1DNW C;  2GJM A;  2E9E A;  3HS6 A;  5HPW A;  3QH0 A;  2PT3 A;  4M10 A;  4NT3 A;  3GCJ A;  3SXV A;  2IKC A;  5F1A A;  4C1M C;  5B72 A;  3ZS1 C;  4GM7 A;  3HS5 A;  3N8X A;  4PNX A;  5FDQ A;  3S4F A;  3TZI A;  5FF1 A;  5FIW C;  3R5O A;  4HHR A;  4HHS A;  1IGX A;  3ERI A;  4Z0L A;  2NQX A;  1D7W C;  5GH0 A;  1PGE A;  3NIU A;  4QJQ A;  1CQE A;  3BXI A;  4M11 A;  1PXX A;  2AYL A; 
#chains in the Genus database with same CATH topology
 2O86 A;  4E1G A;  1D2V C;  1U67 A;  1HT5 A;  3GCK A;  3N8Y B;  5F19 A;  1Q4G A;  3HS7 A;  2EFB A;  3MQE A;  4RUT A;  2Z5Z A;  1DNU C;  3F9P C;  3OGW A;  4RRY A;  3GC1 A;  2QRB A;  3PY4 A;  1PRH A;  3R4X A;  3N8W B;  2OYU P;  1CVU A;  2R5L A;  3LN0 A;  4OEK A;  4OTJ A;  3N8F A;  5IKQ A;  4O1Z A;  5JVY A;  4KSZ A;  3N8Y A;  3NYH A;  1EQH A;  3Q9K A;  3V6Q A;  3GCL A;  3ERH A;  3NAK A;  4RRW A;  2OYE P;  3KRK A;  3QL6 A;  4IG5 A;  3N8W A;  3MDL A;  3OLT A;  3N8Z A;  3OLU A;  1CX2 A;  4KVK A;  1DIY A;  4MSF A;  4PH9 A;  3N8V A;  5COX A;  4LJJ A;  4COX A;  1EBV A;  1DDX A;  4RRX A;  2EHA A;  3I6N A;  1MYP C;  5IKR A;  2OJV A;  4OTY A;  1MHL C;  1EQG A;  4DL1 C;  5KIR A;  6COX A;  2PUM A;  2QPK A;  3LN1 A;  5IKT A;  2IPS A;  4N7A A;  5JW1 A;  3QMO A;  3FAQ A;  2QQT A;  3KRQ A;  4Y55 A;  3ZS0 C;  1HT8 A;  3R55 A;  3NTB A;  3PGH A;  1CXP C;  3NTG A;  3QF1 A;  1PTH A;  4RRZ A;  4KVJ A;  3RR3 A;  3KK6 A;  5GLS A;  4RS0 A;  3RKE A;  3TGY A;  5JVZ A;  4NJB A;  3NT1 A;  1D5L C;  3UBA A;  3R5Q A;  4FM5 A;  3FNL A;  4QYQ A;  1IGZ A;  5IKV A;  1FE2 A;  4KVL A;  4GN6 A;  3Q7D A;  1DNW C;  2GJM A;  2E9E A;  3HS6 A;  5HPW A;  3QH0 A;  2PT3 A;  4M10 A;  4NT3 A;  3GCJ A;  3SXV A;  2IKC A;  5F1A A;  4C1M C;  5B72 A;  3ZS1 C;  4GM7 A;  3HS5 A;  3N8X A;  4PNX A;  5FDQ A;  3S4F A;  3TZI A;  5FF1 A;  5FIW C;  3R5O A;  4HHR A;  4HHS A;  1IGX A;  3ERI A;  4Z0L A;  2NQX A;  1D7W C;  5GH0 A;  1PGE A;  3NIU A;  4QJQ A;  1CQE A;  3BXI A;  4M11 A;  1PXX A;  2AYL A; 
#chains in the Genus database with same CATH homology
 2O86 A;  4E1G A;  1D2V C;  1U67 A;  1HT5 A;  3GCK A;  3N8Y B;  5F19 A;  1Q4G A;  3HS7 A;  2EFB A;  3MQE A;  4RUT A;  2Z5Z A;  1DNU C;  3F9P C;  3OGW A;  4RRY A;  3GC1 A;  2QRB A;  3PY4 A;  1PRH A;  3R4X A;  3N8W B;  2OYU P;  1CVU A;  2R5L A;  3LN0 A;  4OEK A;  4OTJ A;  3N8F A;  5IKQ A;  4O1Z A;  5JVY A;  4KSZ A;  3N8Y A;  3NYH A;  1EQH A;  3Q9K A;  3V6Q A;  3GCL A;  3ERH A;  3NAK A;  4RRW A;  2OYE P;  3KRK A;  3QL6 A;  4IG5 A;  3N8W A;  3MDL A;  3OLT A;  3N8Z A;  3OLU A;  1CX2 A;  4KVK A;  1DIY A;  4MSF A;  4PH9 A;  3N8V A;  5COX A;  4LJJ A;  4COX A;  1EBV A;  1DDX A;  4RRX A;  2EHA A;  3I6N A;  1MYP C;  5IKR A;  2OJV A;  4OTY A;  1MHL C;  1EQG A;  4DL1 C;  5KIR A;  6COX A;  2PUM A;  2QPK A;  3LN1 A;  5IKT A;  2IPS A;  4N7A A;  5JW1 A;  3QMO A;  3FAQ A;  2QQT A;  3KRQ A;  4Y55 A;  3ZS0 C;  1HT8 A;  3R55 A;  3NTB A;  3PGH A;  1CXP C;  3NTG A;  3QF1 A;  1PTH A;  4RRZ A;  4KVJ A;  3RR3 A;  3KK6 A;  5GLS A;  4RS0 A;  3RKE A;  3TGY A;  5JVZ A;  4NJB A;  3NT1 A;  1D5L C;  3UBA A;  3R5Q A;  4FM5 A;  3FNL A;  4QYQ A;  1IGZ A;  5IKV A;  1FE2 A;  4KVL A;  4GN6 A;  3Q7D A;  1DNW C;  2GJM A;  2E9E A;  3HS6 A;  5HPW A;  3QH0 A;  2PT3 A;  4M10 A;  4NT3 A;  3GCJ A;  3SXV A;  2IKC A;  5F1A A;  4C1M C;  5B72 A;  3ZS1 C;  4GM7 A;  3HS5 A;  3N8X A;  4PNX A;  5FDQ A;  3S4F A;  3TZI A;  5FF1 A;  5FIW C;  3R5O A;  4HHR A;  4HHS A;  1IGX A;  3ERI A;  4Z0L A;  2NQX A;  1D7W C;  5GH0 A;  1PGE A;  3NIU A;  4QJQ A;  1CQE A;  3BXI A;  4M11 A;  1PXX A;  2AYL A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...