5FTAA

Crystal structure of the n-terminal btb domain of human kctd10
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
101
structure length
101
Chain Sequence
SSKYVKLNVGGALYYTTMQTLTKQDTMLKAMLSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEG
publication title Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases.
pubmed doi rcsb
source organism Homo sapiens
total genus 28
structure length 101
sequence length 101
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2016-01-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02214 BTB_2 BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 5ftaA00
5IBKA 5DAFA 1DSXA 5JH5B 3DRZA 3M5BA 1EOFA 2OVQA 4U2MA 3HTMA 1LQBB 5FTAA 3GA1A 4W9DB 4JGHC 3BIMA 3ZUNB 4W9EB 2OVPA 3B84A 4ZOUA 5HYWB 3M52A 2PPIA 4I6JC 4W9LB 2IF5A 4CRHA 1FS1B 4JTAB 5A15A 1VCBB 3ZRCB 5HZGC 3WSOB 2IHCA 4W9FB 3V7DA 3ZTCB 2C9WC 2E32B 4B9KE 1FS2B 4BKTB 3L2OA 3MKSA 3OGMA 4AP2A 1LM8C 4B95B 4WQOC 5BXHA 2JZ3C 1QDVA 5H7GA 2I2RA 3C6NA 3HQIA 1EODA 3HVEB 1R28A 5A6RA 1EOEA 2IZVC 4W9JB 2P1OA 2P1PA 2FNJC 3OGKA 4N9F5 3ZTDB 3DCGB 5BO4C 2Z8HA 4BGCA 4W9KB 1R29A 4UIJA 1EXBE 5H7HA 2A79B 5EUPA 5BXDA 3C6OA 4W9GB 3M4TA 5LLIB 4UYIA 2YY9A 2P1MA 1BUOA 1LDKD 4B9KB 4JTDB 2NN2A 3LUTB 1QDWA 4W9HB 4U77A 4W9CB 2ASTA 4CXTA 2P1QA 2NZ0B 2OVRA 3E4UA 3ZKJB 4J8ZA 3FKCA 4CXIA 3OHVA 1P22B 3LBZA 3HU6A 1NEXA 2VPKA 3M8VA 4APFA 3I3NA 3ZRFB 2ASSA 4BKSB 4CXJA 2MA9C 3ZNGB 1T1DA 4W9HH 4W9IB 3OGLA 1A68A 1R2BA 4HXIA 1S1GA 4EOZA 2VKPA 2E31B 4AJYC 1NN7A 3HVEA 4AWJB 5DADA 1CS3A 3LNMB 2R9RB 4JTCB 4CP3A 1HV2A 2Q81A 5BXBA 1FQVB 4U2NA 3C6PA 3OHUA 2P1NA 3KVTA
chains in the Genus database with same CATH superfamily
5IBKA 5DAFA 1DSXA 5JH5B 3DRZA 3M5BA 1EOFA 2OVQA 4U2MA 3HTMA 1LQBB 5FTAA 3GA1A 4W9DB 4JGHC 3BIMA 3ZUNB 4W9EB 2OVPA 3B84A 4ZOUA 5HYWB 3M52A 2PPIA 4I6JC 4W9LB 2IF5A 4CRHA 1FS1B 4JTAB 5A15A 1VCBB 3ZRCB 5HZGC 3WSOB 2IHCA 4W9FB 3V7DA 3ZTCB 2C9WC 2E32B 4B9KE 1FS2B 4BKTB 3L2OA 3MKSA 3OGMA 4AP2A 1LM8C 4B95B 4WQOC 5BXHA 2JZ3C 1QDVA 5H7GA 2I2RA 3C6NA 3HQIA 1EODA 3HVEB 1R28A 5A6RA 1EOEA 2IZVC 4W9JB 2P1OA 2P1PA 2FNJC 3OGKA 4N9F5 3ZTDB 3DCGB 5BO4C 2Z8HA 4BGCA 4W9KB 1R29A 4UIJA 1EXBE 5H7HA 2A79B 5EUPA 5BXDA 3C6OA 4W9GB 3M4TA 5LLIB 4UYIA 2YY9A 2P1MA 4YY8A 1BUOA 1LDKD 4B9KB 4JTDB 2NN2A 3DRYA 3LUTB 1QDWA 4W9HB 4U77A 4W9CB 2ASTA 4CXTA 2P1QA 2NZ0B 2OVRA 3E4UA 3ZKJB 4J8ZA 3FKCA 4CXIA 3OHVA 1P22B 3LBZA 3HU6A 1NEXA 2VPKA 3M8VA 4APFA 3I3NA 3ZRFB 2ASSA 4BKSB 4CXJA 2MA9C 3ZNGB 1T1DA 4W9HH 4W9IB 3OGLA 1A68A 1R2BA 4HXIA 1S1GA 4EOZA 2VKPA 4ZGCA 2E31B 4AJYC 1NN7A 3HVEA 4AWJB 5DADA 1CS3A 3LNMB 2R9RB 4JTCB 4CP3A 3DRXA 1HV2A 2Q81A 5BXBA 1FQVB 4U2NA 3C6PA 3OHUA 2P1NA 3KVTA
chains in the Genus database with same CATH topology
5IBKA 5DAFA 1DSXA 5JH5B 3DRZA 3M5BA 1EOFA 2OVQA 4U2MA 3HTMA 1LQBB 5FTAA 3GA1A 4W9DB 4JGHC 3BIMA 3ZUNB 4W9EB 2OVPA 3B84A 4ZOUA 5HYWB 3M52A 2PPIA 4I6JC 4W9LB 2IF5A 4CRHA 1FS1B 4JTAB 5A15A 1VCBB 3ZRCB 5HZGC 3WSOB 2IHCA 4W9FB 3V7DA 3ZTCB 2C9WC 2E32B 4B9KE 1FS2B 4BKTB 3L2OA 3MKSA 3OGMA 4AP2A 1LM8C 4B95B 4WQOC 5BXHA 2JZ3C 1QDVA 5H7GA 2I2RA 3C6NA 3HQIA 1EODA 3HVEB 1R28A 5A6RA 1EOEA 2IZVC 4W9JB 2P1OA 2P1PA 2FNJC 3OGKA 4N9F5 3ZTDB 3DCGB 5BO4C 2Z8HA 4BGCA 4W9KB 1R29A 4UIJA 1EXBE 5H7HA 2A79B 5EUPA 5BXDA 3C6OA 4W9GB 3M4TA 5LLIB 4UYIA 2YY9A 2P1MA 4YY8A 1BUOA 1LDKD 4B9KB 4JTDB 2NN2A 3DRYA 3LUTB 1QDWA 4W9HB 4U77A 4W9CB 2ASTA 4CXTA 2P1QA 2NZ0B 2OVRA 3E4UA 3ZKJB 4J8ZA 3FKCA 4CXIA 3OHVA 1P22B 3LBZA 3HU6A 1NEXA 2VPKA 3M8VA 4APFA 3I3NA 3ZRFB 2ASSA 4BKSB 4CXJA 2MA9C 3ZNGB 1T1DA 4W9HH 4W9IB 3OGLA 1A68A 1R2BA 4HXIA 1S1GA 4EOZA 2VKPA 4ZGCA 2E31B 4AJYC 1NN7A 3HVEA 4AWJB 5DADA 1CS3A 3LNMB 2R9RB 4JTCB 4CP3A 3DRXA 1HV2A 2Q81A 5BXBA 1FQVB 4U2NA 3C6PA 3OHUA 2P1NA 3KVTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5IBK A;  5DAF A;  1DSX A;  5JH5 B;  3DRZ A;  3M5B A;  1EOF A;  2OVQ A;  4U2M A;  3HTM A;  1LQB B;  5FTA A;  3GA1 A;  4W9D B;  4JGH C;  3BIM A;  3ZUN B;  4W9E B;  2OVP A;  3B84 A;  4ZOU A;  5HYW B;  3M52 A;  2PPI A;  4I6J C;  4W9L B;  2IF5 A;  4CRH A;  1FS1 B;  4JTA B;  5A15 A;  1VCB B;  3ZRC B;  5HZG C;  3WSO B;  2IHC A;  4W9F B;  3V7D A;  3ZTC B;  2C9W C;  2E32 B;  4B9K E;  1FS2 B;  4BKT B;  3L2O A;  3MKS A;  3OGM A;  4AP2 A;  1LM8 C;  4B95 B;  4WQO C;  5BXH A;  2JZ3 C;  1QDV A;  5H7G A;  2I2R A;  3C6N A;  3HQI A;  1EOD A;  3HVE B;  1R28 A;  5A6R A;  1EOE A;  2IZV C;  4W9J B;  2P1O A;  2P1P A;  2FNJ C;  3OGK A;  4N9F 5;  3ZTD B;  3DCG B;  5BO4 C;  2Z8H A;  4BGC A;  4W9K B;  1R29 A;  4UIJ A;  1EXB E;  5H7H A;  2A79 B;  5EUP A;  5BXD A;  3C6O A;  4W9G B;  3M4T A;  5LLI B;  4UYI A;  2YY9 A;  2P1M A;  1BUO A;  1LDK D;  4B9K B;  4JTD B;  2NN2 A;  3LUT B;  1QDW A;  4W9H B;  4U77 A;  4W9C B;  2AST A;  4CXT A;  2P1Q A;  2NZ0 B;  2OVR A;  3E4U A;  3ZKJ B;  4J8Z A;  3FKC A;  4CXI A;  3OHV A;  1P22 B;  3LBZ A;  3HU6 A;  1NEX A;  2VPK A;  3M8V A;  4APF A;  3I3N A;  3ZRF B;  2ASS A;  4BKS B;  4CXJ A;  2MA9 C;  3ZNG B;  1T1D A;  4W9H H;  4W9I B;  3OGL A;  1A68 A;  1R2B A;  4HXI A;  1S1G A;  4EOZ A;  2VKP A;  2E31 B;  4AJY C;  1NN7 A;  3HVE A;  4AWJ B;  5DAD A;  1CS3 A;  3LNM B;  2R9R B;  4JTC B;  4CP3 A;  1HV2 A;  2Q81 A;  5BXB A;  1FQV B;  4U2N A;  3C6P A;  3OHU A;  2P1N A;  3KVT A; 
#chains in the Genus database with same CATH topology
 5IBK A;  5DAF A;  1DSX A;  5JH5 B;  3DRZ A;  3M5B A;  1EOF A;  2OVQ A;  4U2M A;  3HTM A;  1LQB B;  5FTA A;  3GA1 A;  4W9D B;  4JGH C;  3BIM A;  3ZUN B;  4W9E B;  2OVP A;  3B84 A;  4ZOU A;  5HYW B;  3M52 A;  2PPI A;  4I6J C;  4W9L B;  2IF5 A;  4CRH A;  1FS1 B;  4JTA B;  5A15 A;  1VCB B;  3ZRC B;  5HZG C;  3WSO B;  2IHC A;  4W9F B;  3V7D A;  3ZTC B;  2C9W C;  2E32 B;  4B9K E;  1FS2 B;  4BKT B;  3L2O A;  3MKS A;  3OGM A;  4AP2 A;  1LM8 C;  4B95 B;  4WQO C;  5BXH A;  2JZ3 C;  1QDV A;  5H7G A;  2I2R A;  3C6N A;  3HQI A;  1EOD A;  3HVE B;  1R28 A;  5A6R A;  1EOE A;  2IZV C;  4W9J B;  2P1O A;  2P1P A;  2FNJ C;  3OGK A;  4N9F 5;  3ZTD B;  3DCG B;  5BO4 C;  2Z8H A;  4BGC A;  4W9K B;  1R29 A;  4UIJ A;  1EXB E;  5H7H A;  2A79 B;  5EUP A;  5BXD A;  3C6O A;  4W9G B;  3M4T A;  5LLI B;  4UYI A;  2YY9 A;  2P1M A;  4YY8 A;  1BUO A;  1LDK D;  4B9K B;  4JTD B;  2NN2 A;  3DRY A;  3LUT B;  1QDW A;  4W9H B;  4U77 A;  4W9C B;  2AST A;  4CXT A;  2P1Q A;  2NZ0 B;  2OVR A;  3E4U A;  3ZKJ B;  4J8Z A;  3FKC A;  4CXI A;  3OHV A;  1P22 B;  3LBZ A;  3HU6 A;  1NEX A;  2VPK A;  3M8V A;  4APF A;  3I3N A;  3ZRF B;  2ASS A;  4BKS B;  4CXJ A;  2MA9 C;  3ZNG B;  1T1D A;  4W9H H;  4W9I B;  3OGL A;  1A68 A;  1R2B A;  4HXI A;  1S1G A;  4EOZ A;  2VKP A;  4ZGC A;  2E31 B;  4AJY C;  1NN7 A;  3HVE A;  4AWJ B;  5DAD A;  1CS3 A;  3LNM B;  2R9R B;  4JTC B;  4CP3 A;  3DRX A;  1HV2 A;  2Q81 A;  5BXB A;  1FQV B;  4U2N A;  3C6P A;  3OHU A;  2P1N A;  3KVT A; 
#chains in the Genus database with same CATH homology
 5IBK A;  5DAF A;  1DSX A;  5JH5 B;  3DRZ A;  3M5B A;  1EOF A;  2OVQ A;  4U2M A;  3HTM A;  1LQB B;  5FTA A;  3GA1 A;  4W9D B;  4JGH C;  3BIM A;  3ZUN B;  4W9E B;  2OVP A;  3B84 A;  4ZOU A;  5HYW B;  3M52 A;  2PPI A;  4I6J C;  4W9L B;  2IF5 A;  4CRH A;  1FS1 B;  4JTA B;  5A15 A;  1VCB B;  3ZRC B;  5HZG C;  3WSO B;  2IHC A;  4W9F B;  3V7D A;  3ZTC B;  2C9W C;  2E32 B;  4B9K E;  1FS2 B;  4BKT B;  3L2O A;  3MKS A;  3OGM A;  4AP2 A;  1LM8 C;  4B95 B;  4WQO C;  5BXH A;  2JZ3 C;  1QDV A;  5H7G A;  2I2R A;  3C6N A;  3HQI A;  1EOD A;  3HVE B;  1R28 A;  5A6R A;  1EOE A;  2IZV C;  4W9J B;  2P1O A;  2P1P A;  2FNJ C;  3OGK A;  4N9F 5;  3ZTD B;  3DCG B;  5BO4 C;  2Z8H A;  4BGC A;  4W9K B;  1R29 A;  4UIJ A;  1EXB E;  5H7H A;  2A79 B;  5EUP A;  5BXD A;  3C6O A;  4W9G B;  3M4T A;  5LLI B;  4UYI A;  2YY9 A;  2P1M A;  4YY8 A;  1BUO A;  1LDK D;  4B9K B;  4JTD B;  2NN2 A;  3DRY A;  3LUT B;  1QDW A;  4W9H B;  4U77 A;  4W9C B;  2AST A;  4CXT A;  2P1Q A;  2NZ0 B;  2OVR A;  3E4U A;  3ZKJ B;  4J8Z A;  3FKC A;  4CXI A;  3OHV A;  1P22 B;  3LBZ A;  3HU6 A;  1NEX A;  2VPK A;  3M8V A;  4APF A;  3I3N A;  3ZRF B;  2ASS A;  4BKS B;  4CXJ A;  2MA9 C;  3ZNG B;  1T1D A;  4W9H H;  4W9I B;  3OGL A;  1A68 A;  1R2B A;  4HXI A;  1S1G A;  4EOZ A;  2VKP A;  4ZGC A;  2E31 B;  4AJY C;  1NN7 A;  3HVE A;  4AWJ B;  5DAD A;  1CS3 A;  3LNM B;  2R9R B;  4JTC B;  4CP3 A;  3DRX A;  1HV2 A;  2Q81 A;  5BXB A;  1FQV B;  4U2N A;  3C6P A;  3OHU A;  2P1N A;  3KVT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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