5HJAA

Crystal structure of leishmania mexicana arginase in complex with inhibitor abhdp
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
310
structure length
303
Chain Sequence
KKMSIVLAPFSGGQPHSGVELGPDYLLKQGLQQDMEKLGWDTRLERVFDGKVVEARKASDNGDRIGRVKRPRLTAECTEKIYKCVRRVAEQGRFPLTIGGDHSIALGTVAGVLSVHPDAGVIWVDAHADINTMSGTVSGNLHGCPLSILLGLDRENIPECFSWVPQVLKPNKIAYIGLRAVDDEEKKILHDLNIAAFSMHHVDRYGIDKVVSMAIEAVSPKGTEPVMVSYDVDTIDPLYVPATGTPVRGGLSFREALFLCERIAECGRLVALDVVECNPLLNDTISVGCAIARCMMGETLLYT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase
publication title Crystal structures of Leishmania mexicana arginase complexed with alpha , alpha-disubstituted boronic amino-acid inhibitors.
pubmed doi rcsb
source organism Leishmania mexicana
total genus 117
structure length 303
sequence length 310
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2016-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 5hjaA00
1HQGA 2EF5A 1WOGA 1P8MA 3TH7A 4IE1A 1T4PA 2CEVA 4IE3A 2PLLA 5RLAA 5CEVA 4Q42A 1RLAA 1XFKA 1HQFA 3KV2A 3RLAA 1CEVA 4Q3RC 1GQ6A 4IU0A 1TBLA 1HQXA 4MYNA 4Q3VA 1TBHA 3E8ZA 1P8OA 3GMZA 3MFVA 4Q3UA 4DZ4A 4FCKA 4Q40A 3NIOA 4I06A 2ZAVA 3E6KA 1WOIA 1TA1A 2PHAA 3THEA 2PHOA 3SL1A 3GN0A 4RHLA 4GWDA 3LP4A 4GSVA 1P8NA 4IU1A 5HJ9A 1P8SA 4GWCA 3SKKA 3SJTA 1D3VA 3PZLA 2RLAA 4RHIA 1PQ3A 3TF3A 2EIVA 4RHQA 4IXVA 1P8PA 3NIQA 1GQ7A 1T4SA 4RHKA 3LP7A 4G3HA 4Q3PA 4HZEA 4Q3RA 4MXRA 4ITYA 4MYLA 2AEBA 1WOHA 4GSZA 3THJA 3MJLA 4RHMA 1R1OA 3NIPA 1WVBA 4CEVA 3CEVA 3THHA 1ZPEA 1ZPGA 4MYFA 4Q3QA 4IU4A 4GSMA 4Q41A 4Q3TA 4HXQA 1WVAA 3E6VA 4FCIA 4RHJA 4IXUA 5HJAA 3MMRA 4MYKA 1T4RA 4HWWA 4RLAA 1T4TA 3DJ8A 1HQ5A 3F80A 1HQHA 1T5FA 1T5GA 3M1RA 2EF4A 3SL0A 3E8QA 4IU5A 1P8RA 1TBJA 2A0MA 3E9BA 4IE2A 4Q3SA 3LHLA 1P8QA 3MFWA
chains in the Genus database with same CATH superfamily
1HQGA 2EF5A 1WOGA 1P8MA 5G1BA 3RQDA 5G12A 4IE1A 1T4PA 3TH7A 2CEVA 4IE3A 4QA3A 2PLLA 5DC6A 4BZ8A 5RLAA 3EZTA 5CEVA 1T64A 4Q42A 1RLAA 1XFKA 5FCWA 5EF8A 5EFKB 1HQFA 3KV2A 5THVA 3F06A 3RLAA 1CEVA 4BZ7A 4Q3RC 2VQQA 1GQ6A 4IU0A 5D1BA 1TBLA 5G0JA 5G0IA 1HQXA 5EF7A 4MYNA 4Q3VA 5G13A 3ZNRA 5FUEA 4A69A 1C3PA 4RN0A 1TBHA 3C0ZA 5G1AA 3E8ZA 5IX0A 5BWZA 1P8OA 3GMZA 3MFVA 5EEKA 4Q3UA 5EENA 4DZ4A 4FCKA 4Q40A 3NIOA 4I06A 2ZAVA 3E6KA 4RN1A 5G0YA 4QA7A 4CBYA 1WOIA 1TA1A 2PHAA 3MFWA 5EFNA 3THEA 2PHOA 3SL1A 3F07A 3GN0A 3EWFA 4RHLA 5EFGA 4GWDA 3LP4A 5G0XA 5LI3A 5EEMA 3ZNSA 4QA0A 3MENA 4GSVA 1P8NA 4IU1A 4QA2A 5G3WA 5HJ9A 4CBTA 1P8SA 4GWCA 3SKKA 3SJTA 1D3VA 3PZLA 5D1CA 5EEIA 3MZ4A 2GH6A 2VCGA 3F0RA 2RLAA 4RHIA 1PQ3A 5A2SA 3TF3A 2EIVA 4RHQA 1ZZ1A 4IXVA 1P8PA 3NIQA 1GQ7A 1T4SA 3Q9EA 5DC7A 4RHKA 3LP7A 5G17A 4G3HA 4BZ9A 4Q3PA 4ZUMA 4RN2A 4HZEA 4Q3RA 5DC5A 4ZURA 5EEFA 1T69A 5JI5A 4ZUNA 4MXRA 4ITYA 4LXZA 4MYLA 2AEBA 5EFHA 1WOHA 2VQJA 2V5WA 3Q9FA 4GSZA 3THJA 3MJLA 5DC8A 4QA4A 4ZUPA 4RHMA 1R1OA 3Q9CA 5G10A 4BZ6A 1VKGA 2VQVA 3C0YA 1T67A 3NIPA 4LY1A 3SFHA 1WVBA 5EFBD 3CEVA 3MAXA 3THHA 4BKXB 4CEVA 1ZPEA 1ZPGA 5THUA 4QA1A 2VQMA 4QA6A 5D1DA 4MYFA 4Q3QA 5G11A 5IWGA 4ZUQA 4IU4A 4GSMA 4Q41A 4Q3TA 3MZ7A 1C3RA 1ZZ0A 4HXQA 1WVAA 4ZUOA 3E6VA 5ICNB 4FCIA 4RHJA 4IXUA 5THTA 5HJAA 4QA5A 5THSA 2VQOA 3MMRA 4MYKA 1T4RA 4HWWA 4RLAA 5G0GA 1T4TA 3MZ6A 3DJ8A 1HQ5A 3EW8A 1C3SA 1HQHA 1T5FA 1ZZ3A 1T5GA 3F80A 3MZ3A 3Q9BA 3M1RA 5G1CA 5G0HA 3EZPA 3SL0A 3E8QA 4IU5A 5EFJD 1P8RA 2VQWG 1TBJA 3SFFA 4CQFA 2A0MA 4BZ5A 3E9BA 1W22A 2V5XA 4IE2A 3C10A 4Q3SA 3LHLA 1P8QA 2EF4A
chains in the Genus database with same CATH topology
1HQGA 2EF5A 1WOGA 1P8MA 3TH7A 4IE1A 1T4PA 2CEVA 4IE3A 2PLLA 5RLAA 5CEVA 4Q42A 1RLAA 1XFKA 1HQFA 3KV2A 3RLAA 1CEVA 4Q3RC 1GQ6A 4IU0A 1TBLA 1HQXA 4MYNA 4Q3VA 1TBHA 3E8ZA 1P8OA 3GMZA 3MFVA 4Q3UA 4DZ4A 4FCKA 4Q40A 3NIOA 4I06A 2ZAVA 3E6KA 1WOIA 1TA1A 2PHAA 3THEA 2PHOA 3SL1A 3GN0A 4RHLA 4GWDA 3LP4A 4GSVA 1P8NA 4IU1A 5HJ9A 1P8SA 4GWCA 3SKKA 3SJTA 1D3VA 3PZLA 2RLAA 4RHIA 1PQ3A 3TF3A 2EIVA 4RHQA 4IXVA 1P8PA 3NIQA 1GQ7A 1T4SA 4RHKA 3LP7A 4G3HA 4Q3PA 4HZEA 4Q3RA 4MXRA 4ITYA 4MYLA 2AEBA 1WOHA 4GSZA 3THJA 3MJLA 4RHMA 1R1OA 3NIPA 1WVBA 4CEVA 3CEVA 3THHA 1ZPEA 1ZPGA 4MYFA 4Q3QA 4IU4A 4GSMA 4Q41A 4Q3TA 4HXQA 1WVAA 3E6VA 4FCIA 4RHJA 4IXUA 5HJAA 3MMRA 4MYKA 1T4RA 4HWWA 4RLAA 1T4TA 3DJ8A 1HQ5A 3F80A 1HQHA 1T5FA 1T5GA 3M1RA 2EF4A 3SL0A 3E8QA 4IU5A 1P8RA 1TBJA 2A0MA 3E9BA 4IE2A 4Q3SA 3LHLA 1P8QA 3MFWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HQG A;  2EF5 A;  1WOG A;  1P8M A;  3TH7 A;  4IE1 A;  1T4P A;  2CEV A;  4IE3 A;  2PLL A;  5RLA A;  5CEV A;  4Q42 A;  1RLA A;  1XFK A;  1HQF A;  3KV2 A;  3RLA A;  1CEV A;  4Q3R C;  1GQ6 A;  4IU0 A;  1TBL A;  1HQX A;  4MYN A;  4Q3V A;  1TBH A;  3E8Z A;  1P8O A;  3GMZ A;  3MFV A;  4Q3U A;  4DZ4 A;  4FCK A;  4Q40 A;  3NIO A;  4I06 A;  2ZAV A;  3E6K A;  1WOI A;  1TA1 A;  2PHA A;  3THE A;  2PHO A;  3SL1 A;  3GN0 A;  4RHL A;  4GWD A;  3LP4 A;  4GSV A;  1P8N A;  4IU1 A;  5HJ9 A;  1P8S A;  4GWC A;  3SKK A;  3SJT A;  1D3V A;  3PZL A;  2RLA A;  4RHI A;  1PQ3 A;  3TF3 A;  2EIV A;  4RHQ A;  4IXV A;  1P8P A;  3NIQ A;  1GQ7 A;  1T4S A;  4RHK A;  3LP7 A;  4G3H A;  4Q3P A;  4HZE A;  4Q3R A;  4MXR A;  4ITY A;  4MYL A;  2AEB A;  1WOH A;  4GSZ A;  3THJ A;  3MJL A;  4RHM A;  1R1O A;  3NIP A;  1WVB A;  4CEV A;  3CEV A;  3THH A;  1ZPE A;  1ZPG A;  4MYF A;  4Q3Q A;  4IU4 A;  4GSM A;  4Q41 A;  4Q3T A;  4HXQ A;  1WVA A;  3E6V A;  4FCI A;  4RHJ A;  4IXU A;  5HJA A;  3MMR A;  4MYK A;  1T4R A;  4HWW A;  4RLA A;  1T4T A;  3DJ8 A;  1HQ5 A;  3F80 A;  1HQH A;  1T5F A;  1T5G A;  3M1R A;  2EF4 A;  3SL0 A;  3E8Q A;  4IU5 A;  1P8R A;  1TBJ A;  2A0M A;  3E9B A;  4IE2 A;  4Q3S A;  3LHL A;  1P8Q A;  3MFW A; 
#chains in the Genus database with same CATH topology
 1HQG A;  2EF5 A;  1WOG A;  1P8M A;  5G1B A;  3RQD A;  5G12 A;  4IE1 A;  1T4P A;  3TH7 A;  2CEV A;  4IE3 A;  4QA3 A;  2PLL A;  5DC6 A;  4BZ8 A;  5RLA A;  3EZT A;  5CEV A;  1T64 A;  4Q42 A;  1RLA A;  1XFK A;  5FCW A;  5EF8 A;  5EFK B;  1HQF A;  3KV2 A;  5THV A;  3F06 A;  3RLA A;  1CEV A;  4BZ7 A;  4Q3R C;  2VQQ A;  1GQ6 A;  4IU0 A;  5D1B A;  1TBL A;  5G0J A;  5G0I A;  1HQX A;  5EF7 A;  4MYN A;  4Q3V A;  5G13 A;  3ZNR A;  5FUE A;  4A69 A;  1C3P A;  4RN0 A;  1TBH A;  3C0Z A;  5G1A A;  3E8Z A;  5IX0 A;  5BWZ A;  1P8O A;  3GMZ A;  3MFV A;  5EEK A;  4Q3U A;  5EEN A;  4DZ4 A;  4FCK A;  4Q40 A;  3NIO A;  4I06 A;  2ZAV A;  3E6K A;  4RN1 A;  5G0Y A;  4QA7 A;  4CBY A;  1WOI A;  1TA1 A;  2PHA A;  3MFW A;  5EFN A;  3THE A;  2PHO A;  3SL1 A;  3F07 A;  3GN0 A;  3EWF A;  4RHL A;  5EFG A;  4GWD A;  3LP4 A;  5G0X A;  5LI3 A;  5EEM A;  3ZNS A;  4QA0 A;  3MEN A;  4GSV A;  1P8N A;  4IU1 A;  4QA2 A;  5G3W A;  5HJ9 A;  4CBT A;  1P8S A;  4GWC A;  3SKK A;  3SJT A;  1D3V A;  3PZL A;  5D1C A;  5EEI A;  3MZ4 A;  2GH6 A;  2VCG A;  3F0R A;  2RLA A;  4RHI A;  1PQ3 A;  5A2S A;  3TF3 A;  2EIV A;  4RHQ A;  1ZZ1 A;  4IXV A;  1P8P A;  3NIQ A;  1GQ7 A;  1T4S A;  3Q9E A;  5DC7 A;  4RHK A;  3LP7 A;  5G17 A;  4G3H A;  4BZ9 A;  4Q3P A;  4ZUM A;  4RN2 A;  4HZE A;  4Q3R A;  5DC5 A;  4ZUR A;  5EEF A;  1T69 A;  5JI5 A;  4ZUN A;  4MXR A;  4ITY A;  4LXZ A;  4MYL A;  2AEB A;  5EFH A;  1WOH A;  2VQJ A;  2V5W A;  3Q9F A;  4GSZ A;  3THJ A;  3MJL A;  5DC8 A;  4QA4 A;  4ZUP A;  4RHM A;  1R1O A;  3Q9C A;  5G10 A;  4BZ6 A;  1VKG A;  2VQV A;  3C0Y A;  1T67 A;  3NIP A;  4LY1 A;  3SFH A;  1WVB A;  5EFB D;  3CEV A;  3MAX A;  3THH A;  4BKX B;  4CEV A;  1ZPE A;  1ZPG A;  5THU A;  4QA1 A;  2VQM A;  4QA6 A;  5D1D A;  4MYF A;  4Q3Q A;  5G11 A;  5IWG A;  4ZUQ A;  4IU4 A;  4GSM A;  4Q41 A;  4Q3T A;  3MZ7 A;  1C3R A;  1ZZ0 A;  4HXQ A;  1WVA A;  4ZUO A;  3E6V A;  5ICN B;  4FCI A;  4RHJ A;  4IXU A;  5THT A;  5HJA A;  4QA5 A;  5THS A;  2VQO A;  3MMR A;  4MYK A;  1T4R A;  4HWW A;  4RLA A;  5G0G A;  1T4T A;  3MZ6 A;  3DJ8 A;  1HQ5 A;  3EW8 A;  1C3S A;  1HQH A;  1T5F A;  1ZZ3 A;  1T5G A;  3F80 A;  3MZ3 A;  3Q9B A;  3M1R A;  5G1C A;  5G0H A;  3EZP A;  3SL0 A;  3E8Q A;  4IU5 A;  5EFJ D;  1P8R A;  2VQW G;  1TBJ A;  3SFF A;  4CQF A;  2A0M A;  4BZ5 A;  3E9B A;  1W22 A;  2V5X A;  4IE2 A;  3C10 A;  4Q3S A;  3LHL A;  1P8Q A;  2EF4 A; 
#chains in the Genus database with same CATH homology
 1HQG A;  2EF5 A;  1WOG A;  1P8M A;  3TH7 A;  4IE1 A;  1T4P A;  2CEV A;  4IE3 A;  2PLL A;  5RLA A;  5CEV A;  4Q42 A;  1RLA A;  1XFK A;  1HQF A;  3KV2 A;  3RLA A;  1CEV A;  4Q3R C;  1GQ6 A;  4IU0 A;  1TBL A;  1HQX A;  4MYN A;  4Q3V A;  1TBH A;  3E8Z A;  1P8O A;  3GMZ A;  3MFV A;  4Q3U A;  4DZ4 A;  4FCK A;  4Q40 A;  3NIO A;  4I06 A;  2ZAV A;  3E6K A;  1WOI A;  1TA1 A;  2PHA A;  3THE A;  2PHO A;  3SL1 A;  3GN0 A;  4RHL A;  4GWD A;  3LP4 A;  4GSV A;  1P8N A;  4IU1 A;  5HJ9 A;  1P8S A;  4GWC A;  3SKK A;  3SJT A;  1D3V A;  3PZL A;  2RLA A;  4RHI A;  1PQ3 A;  3TF3 A;  2EIV A;  4RHQ A;  4IXV A;  1P8P A;  3NIQ A;  1GQ7 A;  1T4S A;  4RHK A;  3LP7 A;  4G3H A;  4Q3P A;  4HZE A;  4Q3R A;  4MXR A;  4ITY A;  4MYL A;  2AEB A;  1WOH A;  4GSZ A;  3THJ A;  3MJL A;  4RHM A;  1R1O A;  3NIP A;  1WVB A;  4CEV A;  3CEV A;  3THH A;  1ZPE A;  1ZPG A;  4MYF A;  4Q3Q A;  4IU4 A;  4GSM A;  4Q41 A;  4Q3T A;  4HXQ A;  1WVA A;  3E6V A;  4FCI A;  4RHJ A;  4IXU A;  5HJA A;  3MMR A;  4MYK A;  1T4R A;  4HWW A;  4RLA A;  1T4T A;  3DJ8 A;  1HQ5 A;  3F80 A;  1HQH A;  1T5F A;  1T5G A;  3M1R A;  2EF4 A;  3SL0 A;  3E8Q A;  4IU5 A;  1P8R A;  1TBJ A;  2A0M A;  3E9B A;  4IE2 A;  4Q3S A;  3LHL A;  1P8Q A;  3MFW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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