5IJ5A

Crystal structure of equine serum albumin in the presence of 50 mm zinc at ph 4.5
Total Genus 227
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
227
sequence length
581
structure length
581
Chain Sequence
HKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGAEDKEACFAEEGPKLVASSQLALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Serum albumin
publication title Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins.
pubmed doi rcsb
molecule tags Transport protein
total genus 227
structure length 581
sequence length 581
ec nomenclature
pdb deposition date 2016-03-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5ij5A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5ij5A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5ij5A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5ij5A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5ij5A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5ij5A05
4F5SA 5IIHA 1E7CA 1BM0A 1GNIA 4BKEA 1HK1A 4G03A 4HGMB 3UIVA 1E7EA 4IW2A 1E7GA 2BXAA 4HGKA 4N0UD 4F5UA 1HK3A 2BXEA 4LUHA 2I2ZA 4OR0A 2BXPA 1HK5A 5FUOA 1BJ5A 1KXPD 4ZBQA 3SQJA 5IJEA 2BXLA 2BX8A 4L9KA 4JK4A 1O9XA 3LU8A 4LA0A 4S1YA 2XW1A 4F5VA 4N0FD 4OT2A 3CX9A 4PO0A 1GNJA 5IJ5A 2BXCA 3V09A 4IW1A 5HOZA 1UORA 1H9ZA 2BXNA 1E7FA 1MA9A 1E7HA 4G04A 4L9QA 4L8UA 4E99A 5IIUA 2BXOA 2XVUA 1HK4A 2XVWA 4K71A 5DQFA 1BKEA 1E78A 1AO6A 4K2CA 1HK2A 5IIXA 1E7BA 2XSIA 2XVVA 3B9LA 2XW0A 4LB2A 4Z69A 3JRYA 4EMXA 2BXGA 2BXIA 4J2VA 2BXQA 4ZBRA 2BXFA 2BXKA 5ID9A 3JQZA 3LU7A 5DBYA 2BXBA 2VDBA 5ID7A 1HA2A 1N5UA 2BXDA 3LU6A 5GHKA 2I30A 4LB9A 1J7EA 3A73A 1J78A 3B9MA 1TF0A 1KW2A 5IJFA 4LUFA 3TDLA 2VUFA 5IFOA 3V03A 2YDFA 2BXMA 2XVQA 1E7IA 2VUEA 2BXHA 3V08A 1LOTA 1E7AA 4F5TA
chains in the Genus database with same CATH superfamily
4W4UB 2OZBB 4F5SA 3WHSA 2AGHB 5IIHA 2QMCA 1E7CA 1BM0A 1GNIA 4TQ0A 4BKEA 1HK1A 2DYMA 4G03A 4TQ1A 3ECPA 4HGMB 3H3AA 3UIVA 1MIYA 4I9OA 3FWCC 3VQIA 1E7EA 4GDXA 4IW2A 3KJLA 1E7GA 5BPKA 2BXAA 4HGKA 2LXTA 3MHSB 1H5WA 4N0UD 2DBUA 4F5UA 1HK3A 2BXEA 4MBEC 4LUHA 2I2ZA 3NVMA 4OR0A 2E0XA 2BXPA 2Z8KA 1HK5A 2KBZA 4G01A 5FUOA 1BJ5A 1KXPD 4ZBQA 3SQJA 3G9KD 2LQIA 2JUHA 4ZCGA 5IJEA 1JNBA 2BXLA 2EFEA 2BX8A 2NQOA 4FJCB 2LQHA 4L9KA 4JK4A 2LOQA 1O9XA 3WHQA 4C31B 3LU8A 2ROHA 3A75A 3ICXA 4ZBKA 5GINA 3MHHB 4LA0A 4S1YA 2XW1A 5GIOA 4F5VA 3H37A 4N0FD 3KIKA 4OT2A 2LXSA 3NVKA 3CX9A 4PO0A 2KWFA 1GNJA 1KDXA 4ZUXV 4D7XA 3SIVB 5IJ5A 3NVIA 4WA6B 2BXCA 3V09A 4OTUA 4IW1A 2OT3A 2K0NA 2GUTA 3SIUB 2EFHA 3NMUA 1IJGA 5HOZA 4N3ZA 1SB0A 1H9ZA 1UORA 2BXNA 2NNWA 3FWBC 3GA9L 2XMOA 1E7FA 1MA9A 1E7HA 4G04A 4DM0A 3BPJA 1MUHA 4L9QA 4L8UA 5D7GA 2CKXA 4E99A 2BXOA 2XVUA 5IIUA 1HK4A 2XVWA 3GQUA 4K71A 5DQFA 1BKEA 2EFDA 1MUSA 1E78A 1AO6A 1FOUA 4K2CA 1HK2A 5IIXA 5GIPA 1E7BA 2XSIA 2XVVA 3B9LA 2XW0A 2QM6A 4LB2A 4ZC6A 3JRYA 1MIWA 1MIVA 4OTTA 4EMXA 4Z69A 2BXGA 2BXIA 2DYOA 4GDKB 2Z8IA 4J2VA 2DBWA 4GDLB 2BXQA 4ZBRA 1VZSA 2BXFA 2BXKA 3PLAA 4M70B 4DHXB 5ID9A 3JQZA 1VFIA 3LU7A 4FIPB 2DG5A 5DBYA 2AJEA 4GG2A 2BXBA 2E0YA 2VDBA 5ID7A 1HA2A 4BY9C 1N5UA 2BXDA 3LU6A 1TXUA 2Z8JA 2I30A 4Z9OA 5GHKA 4LB9A 5B5TA 1J7EA 3A73A 1J78A 3B9MA 1LNSA 1KW2A 1TF0A 2DBXA 5IJFA 4LUFA 3TDLA 2QHBA 2VUFA 5IFOA 1MM8A 3V03A 2YDFA 2BXMA 3GQXA 2XVQA 3M99C 3FNMA 1E7IA 3W1SA 2VUEA 1NT2B 4FK5B 2BXHA 3WHRA 2EFCA 2V36A 4NAWB 3V08A 1LOTA 1E7AA 4F5TA
chains in the Genus database with same CATH topology
4W4UB 2OZBB 4F5SA 3WHSA 5IIHA 2QMCA 1E7CA 1BM0A 1GNIA 4TQ0A 4BKEA 1HK1A 2DYMA 4G03A 4TQ1A 4HGMB 3H3AA 3UIVA 1MIYA 3VQIA 3FWCC 1E7EA 4GDXA 4IW2A 3KJLA 1E7GA 5BPKA 2BXAA 4HGKA 3MHSB 4N0UD 1H5WA 4F5UA 2DBUA 1HK3A 2BXEA 4MBEC 4LUHA 2I2ZA 3NVMA 4OR0A 2E0XA 2BXPA 2Z8KA 1HK5A 2KBZA 4G01A 5FUOA 1BJ5A 1KXPD 4ZBQA 3SQJA 3G9KD 2JUHA 4ZCGA 5IJEA 1JNBA 2BXLA 2EFEA 2BX8A 2NQOA 4FJCB 4L9KA 4JK4A 2LOQA 1O9XA 3WHQA 4C31B 3LU8A 2ROHA 3A75A 3ICXA 4ZBKA 5GINA 3MHHB 4LA0A 4S1YA 2XW1A 5GIOA 4F5VA 3H37A 4N0FD 3KIKA 4OT2A 3NVKA 3CX9A 4PO0A 1GNJA 4ZUXV 3SIVB 5IJ5A 3NVIA 4WA6B 2BXCA 3V09A 4OTUA 4IW1A 2OT3A 3SIUB 2EFHA 3NMUA 1IJGA 5HOZA 4N3ZA 1H9ZA 1UORA 2BXNA 2NNWA 3FWBC 3GA9L 2XMOA 1E7FA 1MA9A 1E7HA 4G04A 4L9QA 4L8UA 5D7GA 2CKXA 4E99A 2BXOA 2XVUA 5IIUA 1HK4A 2XVWA 3GQUA 4K71A 5DQFA 1BKEA 2EFDA 1E78A 1AO6A 1FOUA 4K2CA 1HK2A 5IIXA 5GIPA 1E7BA 2XSIA 2XVVA 3B9LA 2XW0A 2QM6A 4LB2A 4ZC6A 3JRYA 1MIWA 1MIVA 4OTTA 4EMXA 4Z69A 2BXGA 2BXIA 2DYOA 4GDKB 2Z8IA 4J2VA 2DBWA 4GDLB 2BXQA 4ZBRA 1VZSA 2BXFA 2BXKA 3PLAA 4M70B 4DHXB 5ID9A 3JQZA 1VFIA 3LU7A 4FIPB 2DG5A 5DBYA 2AJEA 4GG2A 2BXBA 2E0YA 2VDBA 5ID7A 1HA2A 4BY9C 1N5UA 2BXDA 3LU6A 1TXUA 2Z8JA 2I30A 4Z9OA 5GHKA 4LB9A 5B5TA 1J7EA 3A73A 1J78A 3B9MA 1LNSA 1KW2A 1TF0A 2DBXA 5IJFA 4LUFA 3TDLA 2QHBA 2VUFA 5IFOA 3V03A 2YDFA 2BXMA 3GQXA 2XVQA 3M99C 3FNMA 1E7IA 3W1SA 2VUEA 1NT2B 4FK5B 2BXHA 3WHRA 2EFCA 2V36A 4NAWB 3V08A 1LOTA 1E7AA 4F5TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4F5S A;  5IIH A;  1E7C A;  1BM0 A;  1GNI A;  4BKE A;  1HK1 A;  4G03 A;  4HGM B;  3UIV A;  1E7E A;  4IW2 A;  1E7G A;  2BXA A;  4HGK A;  4N0U D;  4F5U A;  1HK3 A;  2BXE A;  4LUH A;  2I2Z A;  4OR0 A;  2BXP A;  1HK5 A;  5FUO A;  1BJ5 A;  1KXP D;  4ZBQ A;  3SQJ A;  5IJE A;  2BXL A;  2BX8 A;  4L9K A;  4JK4 A;  1O9X A;  3LU8 A;  4LA0 A;  4S1Y A;  2XW1 A;  4F5V A;  4N0F D;  4OT2 A;  3CX9 A;  4PO0 A;  1GNJ A;  5IJ5 A;  2BXC A;  3V09 A;  4IW1 A;  5HOZ A;  1UOR A;  1H9Z A;  2BXN A;  1E7F A;  1MA9 A;  1E7H A;  4G04 A;  4L9Q A;  4L8U A;  4E99 A;  5IIU A;  2BXO A;  2XVU A;  1HK4 A;  2XVW A;  4K71 A;  5DQF A;  1BKE A;  1E78 A;  1AO6 A;  4K2C A;  1HK2 A;  5IIX A;  1E7B A;  2XSI A;  2XVV A;  3B9L A;  2XW0 A;  4LB2 A;  4Z69 A;  3JRY A;  4EMX A;  2BXG A;  2BXI A;  4J2V A;  2BXQ A;  4ZBR A;  2BXF A;  2BXK A;  5ID9 A;  3JQZ A;  3LU7 A;  5DBY A;  2BXB A;  2VDB A;  5ID7 A;  1HA2 A;  1N5U A;  2BXD A;  3LU6 A;  5GHK A;  2I30 A;  4LB9 A;  1J7E A;  3A73 A;  1J78 A;  3B9M A;  1TF0 A;  1KW2 A;  5IJF A;  4LUF A;  3TDL A;  2VUF A;  5IFO A;  3V03 A;  2YDF A;  2BXM A;  2XVQ A;  1E7I A;  2VUE A;  2BXH A;  3V08 A;  1LOT A;  1E7A A;  4F5T A; 
#chains in the Genus database with same CATH topology
 4W4U B;  2OZB B;  4F5S A;  3WHS A;  2AGH B;  5IIH A;  2QMC A;  1E7C A;  1BM0 A;  1GNI A;  4TQ0 A;  4BKE A;  1HK1 A;  2DYM A;  4G03 A;  4TQ1 A;  3ECP A;  4HGM B;  3H3A A;  3UIV A;  1MIY A;  4I9O A;  3FWC C;  3VQI A;  1E7E A;  4GDX A;  4IW2 A;  3KJL A;  1E7G A;  5BPK A;  2BXA A;  4HGK A;  2LXT A;  3MHS B;  1H5W A;  4N0U D;  2DBU A;  4F5U A;  1HK3 A;  2BXE A;  4MBE C;  4LUH A;  2I2Z A;  3NVM A;  4OR0 A;  2E0X A;  2BXP A;  2Z8K A;  1HK5 A;  2KBZ A;  4G01 A;  5FUO A;  1BJ5 A;  1KXP D;  4ZBQ A;  3SQJ A;  3G9K D;  2LQI A;  2JUH A;  4ZCG A;  5IJE A;  1JNB A;  2BXL A;  2EFE A;  2BX8 A;  2NQO A;  4FJC B;  2LQH A;  4L9K A;  4JK4 A;  2LOQ A;  1O9X A;  3WHQ A;  4C31 B;  3LU8 A;  2ROH A;  3A75 A;  3ICX A;  4ZBK A;  5GIN A;  3MHH B;  4LA0 A;  4S1Y A;  2XW1 A;  5GIO A;  4F5V A;  3H37 A;  4N0F D;  3KIK A;  4OT2 A;  2LXS A;  3NVK A;  3CX9 A;  4PO0 A;  2KWF A;  1GNJ A;  1KDX A;  4ZUX V;  4D7X A;  3SIV B;  5IJ5 A;  3NVI A;  4WA6 B;  2BXC A;  3V09 A;  4OTU A;  4IW1 A;  2OT3 A;  2K0N A;  2GUT A;  3SIU B;  2EFH A;  3NMU A;  1IJG A;  5HOZ A;  4N3Z A;  1SB0 A;  1H9Z A;  1UOR A;  2BXN A;  2NNW A;  3FWB C;  3GA9 L;  2XMO A;  1E7F A;  1MA9 A;  1E7H A;  4G04 A;  4DM0 A;  3BPJ A;  1MUH A;  4L9Q A;  4L8U A;  5D7G A;  2CKX A;  4E99 A;  2BXO A;  2XVU A;  5IIU A;  1HK4 A;  2XVW A;  3GQU A;  4K71 A;  5DQF A;  1BKE A;  2EFD A;  1MUS A;  1E78 A;  1AO6 A;  1FOU A;  4K2C A;  1HK2 A;  5IIX A;  5GIP A;  1E7B A;  2XSI A;  2XVV A;  3B9L A;  2XW0 A;  2QM6 A;  4LB2 A;  4ZC6 A;  3JRY A;  1MIW A;  1MIV A;  4OTT A;  4EMX A;  4Z69 A;  2BXG A;  2BXI A;  2DYO A;  4GDK B;  2Z8I A;  4J2V A;  2DBW A;  4GDL B;  2BXQ A;  4ZBR A;  1VZS A;  2BXF A;  2BXK A;  3PLA A;  4M70 B;  4DHX B;  5ID9 A;  3JQZ A;  1VFI A;  3LU7 A;  4FIP B;  2DG5 A;  5DBY A;  2AJE A;  4GG2 A;  2BXB A;  2E0Y A;  2VDB A;  5ID7 A;  1HA2 A;  4BY9 C;  1N5U A;  2BXD A;  3LU6 A;  1TXU A;  2Z8J A;  2I30 A;  4Z9O A;  5GHK A;  4LB9 A;  5B5T A;  1J7E A;  3A73 A;  1J78 A;  3B9M A;  1LNS A;  1KW2 A;  1TF0 A;  2DBX A;  5IJF A;  4LUF A;  3TDL A;  2QHB A;  2VUF A;  5IFO A;  1MM8 A;  3V03 A;  2YDF A;  2BXM A;  3GQX A;  2XVQ A;  3M99 C;  3FNM A;  1E7I A;  3W1S A;  2VUE A;  1NT2 B;  4FK5 B;  2BXH A;  3WHR A;  2EFC A;  2V36 A;  4NAW B;  3V08 A;  1LOT A;  1E7A A;  4F5T A; 
#chains in the Genus database with same CATH homology
 4W4U B;  2OZB B;  4F5S A;  3WHS A;  5IIH A;  2QMC A;  1E7C A;  1BM0 A;  1GNI A;  4TQ0 A;  4BKE A;  1HK1 A;  2DYM A;  4G03 A;  4TQ1 A;  4HGM B;  3H3A A;  3UIV A;  1MIY A;  3VQI A;  3FWC C;  1E7E A;  4GDX A;  4IW2 A;  3KJL A;  1E7G A;  5BPK A;  2BXA A;  4HGK A;  3MHS B;  4N0U D;  1H5W A;  4F5U A;  2DBU A;  1HK3 A;  2BXE A;  4MBE C;  4LUH A;  2I2Z A;  3NVM A;  4OR0 A;  2E0X A;  2BXP A;  2Z8K A;  1HK5 A;  2KBZ A;  4G01 A;  5FUO A;  1BJ5 A;  1KXP D;  4ZBQ A;  3SQJ A;  3G9K D;  2JUH A;  4ZCG A;  5IJE A;  1JNB A;  2BXL A;  2EFE A;  2BX8 A;  2NQO A;  4FJC B;  4L9K A;  4JK4 A;  2LOQ A;  1O9X A;  3WHQ A;  4C31 B;  3LU8 A;  2ROH A;  3A75 A;  3ICX A;  4ZBK A;  5GIN A;  3MHH B;  4LA0 A;  4S1Y A;  2XW1 A;  5GIO A;  4F5V A;  3H37 A;  4N0F D;  3KIK A;  4OT2 A;  3NVK A;  3CX9 A;  4PO0 A;  1GNJ A;  4ZUX V;  3SIV B;  5IJ5 A;  3NVI A;  4WA6 B;  2BXC A;  3V09 A;  4OTU A;  4IW1 A;  2OT3 A;  3SIU B;  2EFH A;  3NMU A;  1IJG A;  5HOZ A;  4N3Z A;  1H9Z A;  1UOR A;  2BXN A;  2NNW A;  3FWB C;  3GA9 L;  2XMO A;  1E7F A;  1MA9 A;  1E7H A;  4G04 A;  4L9Q A;  4L8U A;  5D7G A;  2CKX A;  4E99 A;  2BXO A;  2XVU A;  5IIU A;  1HK4 A;  2XVW A;  3GQU A;  4K71 A;  5DQF A;  1BKE A;  2EFD A;  1E78 A;  1AO6 A;  1FOU A;  4K2C A;  1HK2 A;  5IIX A;  5GIP A;  1E7B A;  2XSI A;  2XVV A;  3B9L A;  2XW0 A;  2QM6 A;  4LB2 A;  4ZC6 A;  3JRY A;  1MIW A;  1MIV A;  4OTT A;  4EMX A;  4Z69 A;  2BXG A;  2BXI A;  2DYO A;  4GDK B;  2Z8I A;  4J2V A;  2DBW A;  4GDL B;  2BXQ A;  4ZBR A;  1VZS A;  2BXF A;  2BXK A;  3PLA A;  4M70 B;  4DHX B;  5ID9 A;  3JQZ A;  1VFI A;  3LU7 A;  4FIP B;  2DG5 A;  5DBY A;  2AJE A;  4GG2 A;  2BXB A;  2E0Y A;  2VDB A;  5ID7 A;  1HA2 A;  4BY9 C;  1N5U A;  2BXD A;  3LU6 A;  1TXU A;  2Z8J A;  2I30 A;  4Z9O A;  5GHK A;  4LB9 A;  5B5T A;  1J7E A;  3A73 A;  1J78 A;  3B9M A;  1LNS A;  1KW2 A;  1TF0 A;  2DBX A;  5IJF A;  4LUF A;  3TDL A;  2QHB A;  2VUF A;  5IFO A;  3V03 A;  2YDF A;  2BXM A;  3GQX A;  2XVQ A;  3M99 C;  3FNM A;  1E7I A;  3W1S A;  2VUE A;  1NT2 B;  4FK5 B;  2BXH A;  3WHR A;  2EFC A;  2V36 A;  4NAW B;  3V08 A;  1LOT A;  1E7A A;  4F5T A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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