5IWEA

E45q mutant of phenazine biosynthesis protein phzf in complex with (5r,6r)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
279
structure length
279
Chain Sequence
HMHNYVIIDAFASVPLEGNPVAVFFDADDLPPAQMQRIAREMNLSQSTFVLKPRNGGDALIRIFTPVNELPFAGHPLLGTAIALGAHTDNHRLYLETQMGTIAFELERQNGSVIAASMDQPIPTWTALGRDAELLKALGISDSTFPIEIYHNGPRHVFVGLPSIDALSALHPDHRALSNFHDMAINCFAGAGRRWRSRMFSPAYGVVEDAATGSAAGPLAIHLARHGQIEFGQPVEILQGVEIGRPSLMFAKAEGRAEQLTRVEVSGNGVTFGRGTIVL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Mechanisms and Specificity of Phenazine Biosynthesis Protein PhzF.
pubmed doi rcsb
source organism Pseudomonas fluorescens
molecule tags Isomerase
molecule keywords Trans-2,3-dihydro-3-hydroxyanthranilate isomerase
total genus 74
structure length 279
sequence length 279
ec nomenclature ec 5.3.3.17: Trans-2,3-dihydro-3-hydroxyanthranilate isomerase.
pdb deposition date 2016-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02567 PhzC-PhzF Phenazine biosynthesis-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.310.10 Alpha Beta Roll Diaminopimelate Epimerase; Chain A, domain 1 Diaminopimelate Epimerase; Chain A, domain 1 5iweA02
3.10.310.10 Alpha Beta Roll Diaminopimelate Epimerase; Chain A, domain 1 Diaminopimelate Epimerase; Chain A, domain 1 5iweA01
3EKMA 2Q9HA 3G7KA 4IK0A 1S7JA 3FVEA 1BWZA 4J9XA 4K8LA 5H2GA 1XUAA 2GKJA 2AZPA 4K7GB 1QY9A 2Q9JA 1SDJA 2H9FA 1U1XA 1W61A 3EJXA 4Q60A 1U0KA 4JD7A 4JCIA 1U1VA 2PW0A 1U1WA 3EDNA 4J9WA 4K7XA 1XUBA 4DUNA 1QYAA 5M47A 4LB0A 1W62A 1T6KA 5H2YA 1TM0A 2PVZA 5HA4A 4IJZA 4JUUA 5IWEA 4JBDA 1GQZA 4Q2HA 2OTNA 1YM5A 2GKEA
chains in the Genus database with same CATH superfamily
2QB8A 2Q9HA 3FVEA 4J9XA 5H2GA 1SDJA 2EB0A 1U1XA 1U0KA 1WPMA 2ZVFA 4JD7A 1U1WA 2KW7A 4LG3A 4RPAA 1K20A 1QYAA 3W5WA 4LB0A 5H2YA 4JUUA 4JBDA 2OTNA 2GKEA 3EKMA 1S7JA 1BWZA 1XUAA 2GKJA 2AZPA 4K7GB 2Q9JA 3ICJA 2YMAA 2LT2A 4Q60A 3PW9A 5ANPA 3PTJA 3IGHX 2ZXRA 2HAWA 1XUBA 2QB6A 1W62A 3DEVA 4IJZA 2ZXOA 4PY9A 3PVHA 3G7KA 4IK0A 4K8LA 1WPPA 1IR6A 1QY9A 2H9FA 4LS9A 3EJXA 1U1VA 4K7XA 4DUNA 3WQZA 4GL6A 2MPBA 2PVZA 5HA4A 4OA3A 5IWEA 4Q2HA 1YM5A 2KPTA 3G98A 2ENXA 2IW4A 1W61A 4JCIA 2PW0A 1I74A 2QB7A 3EDNA 4J9WA 5M47A 1T6KA 1TM0A 2ZXPA 1K23A 1GQZA
chains in the Genus database with same CATH topology
2QB8A 2Q9HA 3FVEA 4J9XA 5H2GA 1SDJA 2EB0A 1U1XA 1U0KA 1WPMA 2ZVFA 4JD7A 1U1WA 2KW7A 4LG3A 4RPAA 1K20A 1QYAA 3W5WA 4LB0A 5H2YA 4JUUA 4JBDA 2OTNA 2GKEA 3EKMA 1S7JA 1BWZA 1XUAA 2GKJA 2AZPA 4K7GB 2Q9JA 3ICJA 2YMAA 2LT2A 4Q60A 3PW9A 5ANPA 3PTJA 3IGHX 2ZXRA 2HAWA 1XUBA 2QB6A 1W62A 3DEVA 4IJZA 2ZXOA 4PY9A 3PVHA 3G7KA 4IK0A 4K8LA 1WPPA 1IR6A 1QY9A 2H9FA 4LS9A 3EJXA 1U1VA 4K7XA 4DUNA 3WQZA 4GL6A 2MPBA 2PVZA 5HA4A 4OA3A 5IWEA 4Q2HA 1YM5A 2KPTA 3G98A 2ENXA 2IW4A 1W61A 4JCIA 2PW0A 1I74A 2QB7A 3EDNA 4J9WA 5M47A 1T6KA 1TM0A 2ZXPA 1K23A 1GQZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EKM A;  2Q9H A;  3G7K A;  4IK0 A;  1S7J A;  3FVE A;  1BWZ A;  4J9X A;  4K8L A;  5H2G A;  1XUA A;  2GKJ A;  2AZP A;  4K7G B;  1QY9 A;  2Q9J A;  1SDJ A;  2H9F A;  1U1X A;  1W61 A;  3EJX A;  4Q60 A;  1U0K A;  4JD7 A;  4JCI A;  1U1V A;  2PW0 A;  1U1W A;  3EDN A;  4J9W A;  4K7X A;  1XUB A;  4DUN A;  1QYA A;  5M47 A;  4LB0 A;  1W62 A;  1T6K A;  5H2Y A;  1TM0 A;  2PVZ A;  5HA4 A;  4IJZ A;  4JUU A;  5IWE A;  4JBD A;  1GQZ A;  4Q2H A;  2OTN A;  1YM5 A;  2GKE A; 
#chains in the Genus database with same CATH topology
 2QB8 A;  2Q9H A;  3FVE A;  4J9X A;  5H2G A;  1SDJ A;  2EB0 A;  1U1X A;  1U0K A;  1WPM A;  2ZVF A;  4JD7 A;  1U1W A;  2KW7 A;  4LG3 A;  4RPA A;  1K20 A;  1QYA A;  3W5W A;  4LB0 A;  5H2Y A;  4JUU A;  4JBD A;  2OTN A;  2GKE A;  3EKM A;  1S7J A;  1BWZ A;  1XUA A;  2GKJ A;  2AZP A;  4K7G B;  2Q9J A;  3ICJ A;  2YMA A;  2LT2 A;  4Q60 A;  3PW9 A;  5ANP A;  3PTJ A;  3IGH X;  2ZXR A;  2HAW A;  1XUB A;  2QB6 A;  1W62 A;  3DEV A;  4IJZ A;  2ZXO A;  4PY9 A;  3PVH A;  3G7K A;  4IK0 A;  4K8L A;  1WPP A;  1IR6 A;  1QY9 A;  2H9F A;  4LS9 A;  3EJX A;  1U1V A;  4K7X A;  4DUN A;  3WQZ A;  4GL6 A;  2MPB A;  2PVZ A;  5HA4 A;  4OA3 A;  5IWE A;  4Q2H A;  1YM5 A;  2KPT A;  3G98 A;  2ENX A;  2IW4 A;  1W61 A;  4JCI A;  2PW0 A;  1I74 A;  2QB7 A;  3EDN A;  4J9W A;  5M47 A;  1T6K A;  1TM0 A;  2ZXP A;  1K23 A;  1GQZ A; 
#chains in the Genus database with same CATH homology
 2QB8 A;  2Q9H A;  3FVE A;  4J9X A;  5H2G A;  1SDJ A;  2EB0 A;  1U1X A;  1U0K A;  1WPM A;  2ZVF A;  4JD7 A;  1U1W A;  2KW7 A;  4LG3 A;  4RPA A;  1K20 A;  1QYA A;  3W5W A;  4LB0 A;  5H2Y A;  4JUU A;  4JBD A;  2OTN A;  2GKE A;  3EKM A;  1S7J A;  1BWZ A;  1XUA A;  2GKJ A;  2AZP A;  4K7G B;  2Q9J A;  3ICJ A;  2YMA A;  2LT2 A;  4Q60 A;  3PW9 A;  5ANP A;  3PTJ A;  3IGH X;  2ZXR A;  2HAW A;  1XUB A;  2QB6 A;  1W62 A;  3DEV A;  4IJZ A;  2ZXO A;  4PY9 A;  3PVH A;  3G7K A;  4IK0 A;  4K8L A;  1WPP A;  1IR6 A;  1QY9 A;  2H9F A;  4LS9 A;  3EJX A;  1U1V A;  4K7X A;  4DUN A;  3WQZ A;  4GL6 A;  2MPB A;  2PVZ A;  5HA4 A;  4OA3 A;  5IWE A;  4Q2H A;  1YM5 A;  2KPT A;  3G98 A;  2ENX A;  2IW4 A;  1W61 A;  4JCI A;  2PW0 A;  1I74 A;  2QB7 A;  3EDN A;  4J9W A;  5M47 A;  1T6K A;  1TM0 A;  2ZXP A;  1K23 A;  1GQZ A; 
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