5JB4A

A simplified bpti variant containing 21 alanines out 58 of residues
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
58
structure length
58
Chain Sequence
RPAFCLEPPYAGPGAAAIIRYFYNAAAGAAQAFVYGGVRAKRNNFASAADALAACAAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase inhibitor
molecule keywords Pancreatic trypsin inhibitor
publication title Crystal structures of highly simplified BPTIs provide insights into hydration-driven increase of unfolding enthalpy
pubmed doi rcsb
source organism Bos taurus
total genus 9
structure length 58
sequence length 58
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2016-04-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 5jb4A00
1LD5A 1ZJDB 4U32X 1EAWB 5C67C 3TPII 1TOCR 3AUEA 6PTIA 1DEMA 3AUIA 3AUGA 2FI4I 1G6XA 1PITA 3FP8I 3LDJA 2R9PE 3AUDA 3BTQI 4ISLB 9PTIA 2LFLA 4BNRI 1ADZA 3UOUB 1DENA 1TPAI 1P2NB 1AALA 1F7ZI 1TAWB 1QLQA 1YC0I 2RA3C 4Y0YI 1BF0A 3FP7J 1KIGI 1SHPA 2UUXA 2KCRA 4DTGK 1NAGA 1BPTA 3BTHI 2M01A 3FP6I 3GYMI 1JV9A 1YLCB 2TPII 2ZVXA 3OFWA 3M7QB 1FAKI 1P2JI 1BPIA 1DTXA 2DDJA 2DDIA 3AUBA 2HEXA 1CA0D 4WXVC 1BHCA 4WWYC 1D0DA 3T62D 4BQDA 4TPII 1CBWD 3P95E 2FTMB 4PTIA 1UUBA 2ODYE 1BUNB 3TGII 1P2QB 1P2II 3BTDI 1KTHA 1LD6A 1TAPA 4ISNB 1T7CB 1OA65 1P2OB 1OA55 2JOTA 1T8OB 1BTHP 1UUAA 2ZJXA 1IRHA 1DTKA 4NTYB 1CO7I 3AUCA 2CA7A 1AAPA 2KAII 3BTFI 4NTWB 1P2KI 2PTCI 4DG4C 1BTIA 8PTIA 1KUNA 2J6DA 1P2MB 1Y62A 1JV8A 2FTLI 2FI5I 1D0DB 1TCPA 4ISOB 4Y10I 3D65I 3WNYA 3L3TE 1FY8I 5PTIA 3TGKI 3BTKI 2M99A 1JC6A 3L33E 3BTGI 7PTIA 3U1JE 3OTJI 2KNTA 1MTND 3LDMA 5JB5A 5JB6A 3BTWI 4NTXB 3LDIA 1F5RI 3BTEI 1BIKA 1T8MB 1B0CA 1ZR0B 3AUHA 1YLDB 2UUYB 1TFXC 3BTMI 1FANA 1BZ5A 1T8LB 5JB7A 3TGJI 1BZXI 2TGPI 3BYBA 3BTTI 4Y0ZI 1K6UA 3UIRC 2FI3I 4U30W 2IJOI 4BD9B 5JB4A 1EJMB 4Y11I 2LFKA 3CI7A 1BRCI 1KNTA 1BRBI 1YKTB 2W8XA 3P92E 1T8NB
chains in the Genus database with same CATH superfamily
1LD5A 1ZJDB 4U32X 1EAWB 5C67C 3TPII 1TOCR 3AUEA 6PTIA 1DEMA 3AUIA 3AUGA 2FI4I 1G6XA 1PITA 3FP8I 3LDJA 2R9PE 3AUDA 3BTQI 4ISLB 9PTIA 2LFLA 4BNRI 1ADZA 3UOUB 1DENA 1TPAI 1P2NB 1AALA 1F7ZI 1TAWB 1QLQA 1YC0I 2RA3C 4Y0YI 1BF0A 3FP7J 1KIGI 1SHPA 2UUXA 2KCRA 4DTGK 1NAGA 1BPTA 3BTHI 2M01A 3FP6I 3GYMI 1JV9A 1YLCB 2TPII 2ZVXA 3OFWA 3M7QB 1FAKI 1P2JI 1BPIA 1DTXA 2DDJA 2DDIA 3AUBA 2HEXA 1CA0D 4WXVC 1BHCA 4WWYC 1D0DA 3T62D 4BQDA 4TPII 1CBWD 3P95E 2FTMB 4PTIA 1UUBA 2ODYE 1BUNB 3TGII 1P2QB 1P2II 3BTDI 1KTHA 1LD6A 1TAPA 4ISNB 1T7CB 1OA65 1P2OB 1OA55 2JOTA 1T8OB 1BTHP 1UUAA 2ZJXA 1IRHA 1DTKA 4NTYB 1CO7I 3AUCA 2CA7A 1AAPA 2KAII 3BTFI 4NTWB 1P2KI 2PTCI 4DG4C 1BTIA 8PTIA 1KUNA 2J6DA 1P2MB 1Y62A 1JV8A 2FTLI 2FI5I 1D0DB 1TCPA 4ISOB 4Y10I 3D65I 3WNYA 3L3TE 1FY8I 5PTIA 3TGKI 3BTKI 2M99A 1JC6A 3L33E 3BTGI 7PTIA 3U1JE 3OTJI 2KNTA 1MTND 3LDMA 5JB5A 5JB6A 3BTWI 4NTXB 3LDIA 1F5RI 3BTEI 1BIKA 1T8MB 1B0CA 1ZR0B 3AUHA 1YLDB 2UUYB 1TFXC 3BTMI 1FANA 1BZ5A 1T8LB 5JB7A 3TGJI 1BZXI 2TGPI 3BYBA 3BTTI 4Y0ZI 1K6UA 3UIRC 2FI3I 4U30W 2IJOI 4BD9B 5JB4A 1EJMB 4Y11I 2LFKA 3CI7A 1BRCI 1KNTA 1BRBI 1YKTB 2W8XA 3P92E 1T8NB
chains in the Genus database with same CATH topology
1LD5A 1ZJDB 4U32X 1EAWB 5C67C 3TPII 1TOCR 3AUEA 6PTIA 1DEMA 3AUIA 3AUGA 2FI4I 1G6XA 1PITA 3FP8I 3LDJA 2R9PE 3AUDA 3BTQI 4ISLB 9PTIA 2LFLA 4BNRI 1ADZA 3UOUB 1DENA 1TPAI 1P2NB 1AALA 1F7ZI 1TAWB 1QLQA 1YC0I 2RA3C 4Y0YI 1BF0A 3FP7J 1KIGI 1SHPA 2UUXA 2KCRA 4DTGK 1NAGA 1BPTA 3BTHI 2M01A 3FP6I 3GYMI 1JV9A 1YLCB 2TPII 2ZVXA 3OFWA 3M7QB 1FAKI 1P2JI 1BPIA 1DTXA 2DDJA 2DDIA 3AUBA 2HEXA 1CA0D 4WXVC 1BHCA 4WWYC 1D0DA 3T62D 4BQDA 4TPII 1CBWD 3P95E 2FTMB 4PTIA 1UUBA 2ODYE 1BUNB 3TGII 1P2QB 1P2II 3BTDI 1KTHA 1LD6A 1TAPA 4ISNB 1T7CB 1OA65 1P2OB 1OA55 2JOTA 1T8OB 1BTHP 1UUAA 2ZJXA 1IRHA 1DTKA 4NTYB 1CO7I 3AUCA 2CA7A 1AAPA 2KAII 3BTFI 4NTWB 1P2KI 2PTCI 4DG4C 1BTIA 8PTIA 1KUNA 2J6DA 1P2MB 1Y62A 1JV8A 2FTLI 2FI5I 1D0DB 1TCPA 4ISOB 4Y10I 3D65I 3WNYA 3L3TE 1FY8I 5PTIA 3TGKI 3BTKI 2M99A 1JC6A 3L33E 3BTGI 7PTIA 3U1JE 3OTJI 2KNTA 1MTND 3LDMA 5JB5A 5JB6A 3BTWI 4NTXB 3LDIA 1F5RI 3BTEI 1BIKA 1T8MB 1B0CA 1ZR0B 3AUHA 1YLDB 2UUYB 1TFXC 3BTMI 1FANA 1BZ5A 1T8LB 5JB7A 3TGJI 1BZXI 2TGPI 3BYBA 3BTTI 4Y0ZI 1K6UA 3UIRC 2FI3I 4U30W 2IJOI 4BD9B 5JB4A 1EJMB 4Y11I 2LFKA 3CI7A 1BRCI 1KNTA 1BRBI 1YKTB 2W8XA 3P92E 1T8NB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LD5 A;  1ZJD B;  4U32 X;  1EAW B;  5C67 C;  3TPI I;  1TOC R;  3AUE A;  6PTI A;  1DEM A;  3AUI A;  3AUG A;  2FI4 I;  1G6X A;  1PIT A;  3FP8 I;  3LDJ A;  2R9P E;  3AUD A;  3BTQ I;  4ISL B;  9PTI A;  2LFL A;  4BNR I;  1ADZ A;  3UOU B;  1DEN A;  1TPA I;  1P2N B;  1AAL A;  1F7Z I;  1TAW B;  1QLQ A;  1YC0 I;  2RA3 C;  4Y0Y I;  1BF0 A;  3FP7 J;  1KIG I;  1SHP A;  2UUX A;  2KCR A;  4DTG K;  1NAG A;  1BPT A;  3BTH I;  2M01 A;  3FP6 I;  3GYM I;  1JV9 A;  1YLC B;  2TPI I;  2ZVX A;  3OFW A;  3M7Q B;  1FAK I;  1P2J I;  1BPI A;  1DTX A;  2DDJ A;  2DDI A;  3AUB A;  2HEX A;  1CA0 D;  4WXV C;  1BHC A;  4WWY C;  1D0D A;  3T62 D;  4BQD A;  4TPI I;  1CBW D;  3P95 E;  2FTM B;  4PTI A;  1UUB A;  2ODY E;  1BUN B;  3TGI I;  1P2Q B;  1P2I I;  3BTD I;  1KTH A;  1LD6 A;  1TAP A;  4ISN B;  1T7C B;  1OA6 5;  1P2O B;  1OA5 5;  2JOT A;  1T8O B;  1BTH P;  1UUA A;  2ZJX A;  1IRH A;  1DTK A;  4NTY B;  1CO7 I;  3AUC A;  2CA7 A;  1AAP A;  2KAI I;  3BTF I;  4NTW B;  1P2K I;  2PTC I;  4DG4 C;  1BTI A;  8PTI A;  1KUN A;  2J6D A;  1P2M B;  1Y62 A;  1JV8 A;  2FTL I;  2FI5 I;  1D0D B;  1TCP A;  4ISO B;  4Y10 I;  3D65 I;  3WNY A;  3L3T E;  1FY8 I;  5PTI A;  3TGK I;  3BTK I;  2M99 A;  1JC6 A;  3L33 E;  3BTG I;  7PTI A;  3U1J E;  3OTJ I;  2KNT A;  1MTN D;  3LDM A;  5JB5 A;  5JB6 A;  3BTW I;  4NTX B;  3LDI A;  1F5R I;  3BTE I;  1BIK A;  1T8M B;  1B0C A;  1ZR0 B;  3AUH A;  1YLD B;  2UUY B;  1TFX C;  3BTM I;  1FAN A;  1BZ5 A;  1T8L B;  5JB7 A;  3TGJ I;  1BZX I;  2TGP I;  3BYB A;  3BTT I;  4Y0Z I;  1K6U A;  3UIR C;  2FI3 I;  4U30 W;  2IJO I;  4BD9 B;  5JB4 A;  1EJM B;  4Y11 I;  2LFK A;  3CI7 A;  1BRC I;  1KNT A;  1BRB I;  1YKT B;  2W8X A;  3P92 E;  1T8N B; 
#chains in the Genus database with same CATH topology
 1LD5 A;  1ZJD B;  4U32 X;  1EAW B;  5C67 C;  3TPI I;  1TOC R;  3AUE A;  6PTI A;  1DEM A;  3AUI A;  3AUG A;  2FI4 I;  1G6X A;  1PIT A;  3FP8 I;  3LDJ A;  2R9P E;  3AUD A;  3BTQ I;  4ISL B;  9PTI A;  2LFL A;  4BNR I;  1ADZ A;  3UOU B;  1DEN A;  1TPA I;  1P2N B;  1AAL A;  1F7Z I;  1TAW B;  1QLQ A;  1YC0 I;  2RA3 C;  4Y0Y I;  1BF0 A;  3FP7 J;  1KIG I;  1SHP A;  2UUX A;  2KCR A;  4DTG K;  1NAG A;  1BPT A;  3BTH I;  2M01 A;  3FP6 I;  3GYM I;  1JV9 A;  1YLC B;  2TPI I;  2ZVX A;  3OFW A;  3M7Q B;  1FAK I;  1P2J I;  1BPI A;  1DTX A;  2DDJ A;  2DDI A;  3AUB A;  2HEX A;  1CA0 D;  4WXV C;  1BHC A;  4WWY C;  1D0D A;  3T62 D;  4BQD A;  4TPI I;  1CBW D;  3P95 E;  2FTM B;  4PTI A;  1UUB A;  2ODY E;  1BUN B;  3TGI I;  1P2Q B;  1P2I I;  3BTD I;  1KTH A;  1LD6 A;  1TAP A;  4ISN B;  1T7C B;  1OA6 5;  1P2O B;  1OA5 5;  2JOT A;  1T8O B;  1BTH P;  1UUA A;  2ZJX A;  1IRH A;  1DTK A;  4NTY B;  1CO7 I;  3AUC A;  2CA7 A;  1AAP A;  2KAI I;  3BTF I;  4NTW B;  1P2K I;  2PTC I;  4DG4 C;  1BTI A;  8PTI A;  1KUN A;  2J6D A;  1P2M B;  1Y62 A;  1JV8 A;  2FTL I;  2FI5 I;  1D0D B;  1TCP A;  4ISO B;  4Y10 I;  3D65 I;  3WNY A;  3L3T E;  1FY8 I;  5PTI A;  3TGK I;  3BTK I;  2M99 A;  1JC6 A;  3L33 E;  3BTG I;  7PTI A;  3U1J E;  3OTJ I;  2KNT A;  1MTN D;  3LDM A;  5JB5 A;  5JB6 A;  3BTW I;  4NTX B;  3LDI A;  1F5R I;  3BTE I;  1BIK A;  1T8M B;  1B0C A;  1ZR0 B;  3AUH A;  1YLD B;  2UUY B;  1TFX C;  3BTM I;  1FAN A;  1BZ5 A;  1T8L B;  5JB7 A;  3TGJ I;  1BZX I;  2TGP I;  3BYB A;  3BTT I;  4Y0Z I;  1K6U A;  3UIR C;  2FI3 I;  4U30 W;  2IJO I;  4BD9 B;  5JB4 A;  1EJM B;  4Y11 I;  2LFK A;  3CI7 A;  1BRC I;  1KNT A;  1BRB I;  1YKT B;  2W8X A;  3P92 E;  1T8N B; 
#chains in the Genus database with same CATH homology
 1LD5 A;  1ZJD B;  4U32 X;  1EAW B;  5C67 C;  3TPI I;  1TOC R;  3AUE A;  6PTI A;  1DEM A;  3AUI A;  3AUG A;  2FI4 I;  1G6X A;  1PIT A;  3FP8 I;  3LDJ A;  2R9P E;  3AUD A;  3BTQ I;  4ISL B;  9PTI A;  2LFL A;  4BNR I;  1ADZ A;  3UOU B;  1DEN A;  1TPA I;  1P2N B;  1AAL A;  1F7Z I;  1TAW B;  1QLQ A;  1YC0 I;  2RA3 C;  4Y0Y I;  1BF0 A;  3FP7 J;  1KIG I;  1SHP A;  2UUX A;  2KCR A;  4DTG K;  1NAG A;  1BPT A;  3BTH I;  2M01 A;  3FP6 I;  3GYM I;  1JV9 A;  1YLC B;  2TPI I;  2ZVX A;  3OFW A;  3M7Q B;  1FAK I;  1P2J I;  1BPI A;  1DTX A;  2DDJ A;  2DDI A;  3AUB A;  2HEX A;  1CA0 D;  4WXV C;  1BHC A;  4WWY C;  1D0D A;  3T62 D;  4BQD A;  4TPI I;  1CBW D;  3P95 E;  2FTM B;  4PTI A;  1UUB A;  2ODY E;  1BUN B;  3TGI I;  1P2Q B;  1P2I I;  3BTD I;  1KTH A;  1LD6 A;  1TAP A;  4ISN B;  1T7C B;  1OA6 5;  1P2O B;  1OA5 5;  2JOT A;  1T8O B;  1BTH P;  1UUA A;  2ZJX A;  1IRH A;  1DTK A;  4NTY B;  1CO7 I;  3AUC A;  2CA7 A;  1AAP A;  2KAI I;  3BTF I;  4NTW B;  1P2K I;  2PTC I;  4DG4 C;  1BTI A;  8PTI A;  1KUN A;  2J6D A;  1P2M B;  1Y62 A;  1JV8 A;  2FTL I;  2FI5 I;  1D0D B;  1TCP A;  4ISO B;  4Y10 I;  3D65 I;  3WNY A;  3L3T E;  1FY8 I;  5PTI A;  3TGK I;  3BTK I;  2M99 A;  1JC6 A;  3L33 E;  3BTG I;  7PTI A;  3U1J E;  3OTJ I;  2KNT A;  1MTN D;  3LDM A;  5JB5 A;  5JB6 A;  3BTW I;  4NTX B;  3LDI A;  1F5R I;  3BTE I;  1BIK A;  1T8M B;  1B0C A;  1ZR0 B;  3AUH A;  1YLD B;  2UUY B;  1TFX C;  3BTM I;  1FAN A;  1BZ5 A;  1T8L B;  5JB7 A;  3TGJ I;  1BZX I;  2TGP I;  3BYB A;  3BTT I;  4Y0Z I;  1K6U A;  3UIR C;  2FI3 I;  4U30 W;  2IJO I;  4BD9 B;  5JB4 A;  1EJM B;  4Y11 I;  2LFK A;  3CI7 A;  1BRC I;  1KNT A;  1BRB I;  1YKT B;  2W8X A;  3P92 E;  1T8N B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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